pycom07g14020

QWRF motif-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
OG0002875
Physical Location & Seq
Reverse (-)
15841488 .. 15841673
186 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g14020.1

Sequence Viewer

Length: 186 bp
ATGCATGTGCAGCTGCTGCAAGCTAAAAATCACCATTTAGCTTCAGACAGGATCTCAACACATCCTCGTCTCCTCCAGCAGGTTTTCCTCCTCTTCATTGTCTGCAACCTGGAAACTCGTCAGCACGCCTATTTCCAGCAACAACCCATCGAGCCAGACAAAATTCCCACACTTCCTCCTACCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
QWRF

Protein Analysis

62

Amino Acids

7.15

Weight (kDa)

8.03

Isoelectric Point (pI)

52.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 70
AclWI GGATC 1 cut(s) 59
AcsI RAATTY 1 cut(s) 162
AcuI CTGAAG 1 cut(s) 27
AfiI CCNNNNNNNGG 1 cut(s) 79
AjnI CCWGG 1 cut(s) 108
AluBI AGCT 3 cut(s) 13, 23, 41
AluI AGCT 3 cut(s) 13, 23, 41
Alw26I GTCTC 1 cut(s) 74
AlwI GGATC 1 cut(s) 59
AlwNI CAGNNNCTG 1 cut(s) 16
ApeKI GCWGC 3 cut(s) 10, 13, 16
ApoI RAATTY 1 cut(s) 162
AsuHPI GGTGA 1 cut(s) 23
BbvI GCAGC 2 cut(s) 3, 22
BccI CCATC 1 cut(s) 155
BciT130I CCWGG 1 cut(s) 110
BcoDI GTCTC 1 cut(s) 74
BfuAI ACCTGC 1 cut(s) 70
BisI GCNGC 3 cut(s) 11, 14, 17
BlsI GCNGC 3 cut(s) 12, 15, 18
Bme1390I CCNGG 1 cut(s) 110
BmrFI CCNGG 1 cut(s) 110
BpmI CTGGAG 1 cut(s) 59
BsaXI ACNNNNNCTCC 1 cut(s) 160
Bsc4I CCNNNNNNNGG 1 cut(s) 79
BseBI CCWGG 1 cut(s) 110
BseGI GGATG 1 cut(s) 61
BseLI CCNNNNNNNGG 1 cut(s) 79
BseRI GAGGAG 2 cut(s) 62, 80
BseXI GCAGC 2 cut(s) 3, 22
BsgI GTGCAG 1 cut(s) 29
BslI CCNNNNNNNGG 1 cut(s) 79
BsmAI GTCTC 1 cut(s) 74
BsmBI CGTCTC 1 cut(s) 74
Bsp143I GATC 1 cut(s) 51
BspMI ACCTGC 1 cut(s) 70
BspPI GGATC 1 cut(s) 59
BssMI GATC 1 cut(s) 51
Bst2UI CCWGG 1 cut(s) 110
Bst6I CTCTTC 1 cut(s) 98
BstAPI GCANNNNNTGC 1 cut(s) 16
BstC8I GCNNGC 2 cut(s) 21, 126
BstENI CCTNNNNNAGG 1 cut(s) 77
BstF5I GGATG 1 cut(s) 61
BstKTI GATC 1 cut(s) 54
BstMAI GTCTC 1 cut(s) 74
BstMBI GATC 1 cut(s) 51
BstMWI GCNNNNNNNGC 2 cut(s) 10, 16
BstNI CCWGG 1 cut(s) 110
BstNSI RCATGY 1 cut(s) 8
BstSCI CCNGG 1 cut(s) 108
BstV1I GCAGC 2 cut(s) 3, 22
BstX2I RGATCY 1 cut(s) 51
BstYI RGATCY 1 cut(s) 51
BtsCI GGATG 1 cut(s) 61
BveI ACCTGC 1 cut(s) 70
Cac8I GCNNGC 2 cut(s) 21, 126
CaiI CAGNNNCTG 1 cut(s) 16
CviAII CATG 1 cut(s) 5
CviJI RGCY 4 cut(s) 13, 23, 41, 154
CviKI_1 RGCY 4 cut(s) 13, 23, 41, 154
DpnI GATC 1 cut(s) 53
DpnII GATC 1 cut(s) 51
Eam1104I CTCTTC 1 cut(s) 98
EarI CTCTTC 1 cut(s) 98
Eco57I CTGAAG 1 cut(s) 27
EcoNI CCTNNNNNAGG 1 cut(s) 77
EcoRII CCWGG 1 cut(s) 108
EcoT22I ATGCAT 1 cut(s) 6
Esp3I CGTCTC 1 cut(s) 74
FaeI CATG 1 cut(s) 8
FaiI YATR 1 cut(s) 6
FatI CATG 1 cut(s) 4
Fnu4HI GCNGC 3 cut(s) 11, 14, 17
FokI GGATG 1 cut(s) 48
Fsp4HI GCNGC 3 cut(s) 11, 14, 17
GluI GCNGC 3 cut(s) 11, 14, 17
GsuI CTGGAG 1 cut(s) 59
Hin1II CATG 1 cut(s) 8
HphI GGTGA 1 cut(s) 23
Hpy188I TCNGA 1 cut(s) 46
HpyCH4V TGCA 4 cut(s) 4, 10, 19, 105
HpyF10VI GCNNNNNNNGC 2 cut(s) 10, 16
Hsp92II CATG 1 cut(s) 8
Kzo9I GATC 1 cut(s) 51
LpnPI CCDG 7 cut(s) 34, 65, 89, 95, 122, 149, 168
Lsp1109I GCAGC 2 cut(s) 3, 22
MalI GATC 1 cut(s) 53
MboI GATC 1 cut(s) 51
MboII GAAGA 1 cut(s) 85
MflI RGATCY 1 cut(s) 51
MluCI AATT 1 cut(s) 162
MnlI CCTC 5 cut(s) 75, 83, 98, 101, 186
Mph1103I ATGCAT 1 cut(s) 6
MspA1I CMGCKG 1 cut(s) 13
MspR9I CCNGG 1 cut(s) 110
MvaI CCWGG 1 cut(s) 110
MwoI GCNNNNNNNGC 2 cut(s) 10, 16
NdeII GATC 1 cut(s) 51
NlaIII CATG 1 cut(s) 8
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 1 cut(s) 8
PkrI GCNGC 3 cut(s) 12, 15, 18
Psp6I CCWGG 1 cut(s) 108
PspGI CCWGG 1 cut(s) 108
PstNI CAGNNNCTG 1 cut(s) 16
PsuI RGATCY 1 cut(s) 51
PvuII CAGCTG 1 cut(s) 13
SatI GCNGC 3 cut(s) 11, 14, 17
Sau3AI GATC 1 cut(s) 51
ScrFI CCNGG 1 cut(s) 110
SetI ASST 6 cut(s) 15, 25, 43, 84, 111, 185
Sse9I AATT 1 cut(s) 162
StyD4I CCNGG 1 cut(s) 108
TaqI TCGA 1 cut(s) 150
TasI AATT 1 cut(s) 162
TseI GCWGC 3 cut(s) 10, 13, 16
TspDTI ATGAA 1 cut(s) 85
XagI CCTNNNNNAGG 1 cut(s) 77
XapI RAATTY 1 cut(s) 162
XceI RCATGY 1 cut(s) 8
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.