pycom11g27190

QWRF motif-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0002875
Physical Location & Seq
Reverse (-)
29519656 .. 29520030
375 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g27190.1

Sequence Viewer

Length: 375 bp
ATGAAATTGTTGCCAACTTATAATATGAGCCAATCACAACAATCTCTACCTTGGCGAATACACCATGCAAAAATCCTTGCACCCATCACCAAAGCCCATTGGCCTTACATACCAGCATGCACACTCCGAATTCACCTCGTTGGTCCTGTTCCGATTCAGTTACTGCCAATGCATGTGCAGCTGCTGCAAGCTAAAAATCACCATTTAGCTTCAGACAGGATCTCAACACATCCTCGTCTCCTCCAGCAGGTTTTCCTCCTCTTCATTGTCTGCAACCTGGAAACTCGTCAGCGCGCCTATTTCCAGCAACAACCCATCGAGCCAGACAAAATTCCCACACTTCCTCCTACCTCAGGACCTTCTCATCATCTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
QWRF

Protein Analysis

125

Amino Acids

14.29

Weight (kDa)

10.02

Isoelectric Point (pI)

65.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 21
Acc36I ACCTGC 1 cut(s) 238
AccII CGCG 1 cut(s) 294
AclWI GGATC 1 cut(s) 227
AcsI RAATTY 2 cut(s) 129, 330
AcuI CTGAAG 1 cut(s) 195
AfiI CCNNNNNNNGG 2 cut(s) 247, 353
AjnI CCWGG 1 cut(s) 276
AluBI AGCT 3 cut(s) 181, 191, 209
AluI AGCT 3 cut(s) 181, 191, 209
Alw26I GTCTC 1 cut(s) 242
AlwI GGATC 1 cut(s) 227
AlwNI CAGNNNCTG 2 cut(s) 163, 184
AoxI GGCC 1 cut(s) 101
ApeKI GCWGC 3 cut(s) 178, 181, 184
ApoI RAATTY 2 cut(s) 129, 330
AspLEI GCGC 2 cut(s) 294, 296
AspS9I GGNCC 2 cut(s) 143, 356
AsuHPI GGTGA 3 cut(s) 79, 125, 191
AvaII GGWCC 2 cut(s) 143, 356
AxyI CCTNAGG 1 cut(s) 352
BbvI GCAGC 3 cut(s) 168, 171, 190
BccI CCATC 2 cut(s) 92, 323
BciT130I CCWGG 1 cut(s) 278
BcoDI GTCTC 1 cut(s) 242
BfuAI ACCTGC 1 cut(s) 238
BisI GCNGC 3 cut(s) 179, 182, 185
BlsI GCNGC 3 cut(s) 180, 183, 186
Bme1390I CCNGG 1 cut(s) 278
Bme18I GGWCC 2 cut(s) 143, 356
BmgT120I GGNCC 2 cut(s) 143, 356
BmrFI CCNGG 1 cut(s) 278
BpmI CTGGAG 1 cut(s) 227
BsaJI CCNNGG 1 cut(s) 50
BsaXI ACNNNNNCTCC 2 cut(s) 328, 358
Bsc4I CCNNNNNNNGG 2 cut(s) 247, 353
Bse21I CCTNAGG 1 cut(s) 352
BseBI CCWGG 1 cut(s) 278
BseDI CCNNGG 1 cut(s) 50
BseGI GGATG 1 cut(s) 229
BseLI CCNNNNNNNGG 2 cut(s) 247, 353
BseMII CTCAG 1 cut(s) 366
BsePI GCGCGC 1 cut(s) 292
BseRI GAGGAG 2 cut(s) 230, 248
BseXI GCAGC 3 cut(s) 168, 171, 190
BsgI GTGCAG 1 cut(s) 197
Bsh1236I CGCG 1 cut(s) 294
BshFI GGCC 1 cut(s) 103
BslI CCNNNNNNNGG 2 cut(s) 247, 353
BsmAI GTCTC 1 cut(s) 242
BsmBI CGTCTC 1 cut(s) 242
BsnI GGCC 1 cut(s) 103
Bsp143I GATC 1 cut(s) 219
BspANI GGCC 1 cut(s) 103
BspCNI CTCAG 1 cut(s) 365
BspFNI CGCG 1 cut(s) 294
BspMI ACCTGC 1 cut(s) 238
BspPI GGATC 1 cut(s) 227
BssECI CCNNGG 1 cut(s) 50
BssHII GCGCGC 1 cut(s) 292
BssMI GATC 1 cut(s) 219
BssT1I CCWWGG 1 cut(s) 50
Bst2UI CCWGG 1 cut(s) 278
Bst6I CTCTTC 1 cut(s) 266
BstAPI GCANNNNNTGC 1 cut(s) 184
BstC8I GCNNGC 3 cut(s) 118, 189, 294
BstDEI CTNAG 1 cut(s) 352
BstENI CCTNNNNNAGG 2 cut(s) 245, 351
BstF5I GGATG 1 cut(s) 229
BstFNI CGCG 1 cut(s) 294
BstHHI GCGC 2 cut(s) 294, 296
BstKTI GATC 1 cut(s) 222
BstMAI GTCTC 1 cut(s) 242
BstMBI GATC 1 cut(s) 219
BstMWI GCNNNNNNNGC 2 cut(s) 178, 184
BstNI CCWGG 1 cut(s) 278
BstNSI RCATGY 2 cut(s) 120, 176
BstSCI CCNGG 1 cut(s) 276
BstUI CGCG 1 cut(s) 294
BstV1I GCAGC 3 cut(s) 168, 171, 190
BstX2I RGATCY 1 cut(s) 219
BstYI RGATCY 1 cut(s) 219
Bsu36I CCTNAGG 1 cut(s) 352
BsuRI GGCC 1 cut(s) 103
BtsCI GGATG 1 cut(s) 229
BveI ACCTGC 1 cut(s) 238
Cac8I GCNNGC 3 cut(s) 118, 189, 294
CaiI CAGNNNCTG 2 cut(s) 163, 184
CfoI GCGC 2 cut(s) 294, 296
Cfr13I GGNCC 2 cut(s) 143, 356
CviAII CATG 3 cut(s) 65, 117, 173
CviJI RGCY 7 cut(s) 30, 95, 103, 181, 191, 209, 322
CviKI_1 RGCY 7 cut(s) 30, 95, 103, 181, 191, 209, 322
DdeI CTNAG 1 cut(s) 352
DpnI GATC 1 cut(s) 221
DpnII GATC 1 cut(s) 219
Eam1104I CTCTTC 1 cut(s) 266
EarI CTCTTC 1 cut(s) 266
Eco130I CCWWGG 1 cut(s) 50
Eco47I GGWCC 2 cut(s) 143, 356
Eco57I CTGAAG 1 cut(s) 195
Eco81I CCTNAGG 1 cut(s) 352
EcoNI CCTNNNNNAGG 2 cut(s) 245, 351
EcoO109I RGGNCCY 1 cut(s) 356
EcoRI GAATTC 1 cut(s) 129
EcoRII CCWGG 1 cut(s) 276
EcoT14I CCWWGG 1 cut(s) 50
EcoT22I ATGCAT 1 cut(s) 174
ErhI CCWWGG 1 cut(s) 50
Esp3I CGTCTC 1 cut(s) 242
FaeI CATG 3 cut(s) 68, 120, 176
FaiI YATR 6 cut(s) 21, 26, 66, 110, 118, 174
FatI CATG 3 cut(s) 64, 116, 172
Fnu4HI GCNGC 3 cut(s) 179, 182, 185
FokI GGATG 1 cut(s) 216
Fsp4HI GCNGC 3 cut(s) 179, 182, 185
GlaI GCGC 2 cut(s) 293, 295
GluI GCNGC 3 cut(s) 179, 182, 185
GsuI CTGGAG 1 cut(s) 227
HaeIII GGCC 1 cut(s) 103
HhaI GCGC 2 cut(s) 294, 296
Hin1II CATG 3 cut(s) 68, 120, 176
Hin6I GCGC 2 cut(s) 292, 294
HinP1I GCGC 2 cut(s) 292, 294
HinfI GANTC 1 cut(s) 154
HphI GGTGA 3 cut(s) 79, 125, 191
Hpy188I TCNGA 3 cut(s) 128, 153, 214
Hpy188III TCNNGA 1 cut(s) 354
HpyAV CCTTC 1 cut(s) 369
HpyCH4V TGCA 7 cut(s) 68, 80, 120, 172, 178, 187, 273
HpyF10VI GCNNNNNNNGC 2 cut(s) 178, 184
HpyF3I CTNAG 1 cut(s) 352
Hsp92II CATG 3 cut(s) 68, 120, 176
HspAI GCGC 2 cut(s) 292, 294
Kzo9I GATC 1 cut(s) 219
Lsp1109I GCAGC 3 cut(s) 168, 171, 190
MaeIII GTNAC 1 cut(s) 159
MalI GATC 1 cut(s) 221
MboI GATC 1 cut(s) 219
MboII GAAGA 1 cut(s) 253
MflI RGATCY 1 cut(s) 219
MluCI AATT 3 cut(s) 5, 129, 330
MnlI CCTC 7 cut(s) 146, 243, 251, 266, 269, 354, 361
Mph1103I ATGCAT 1 cut(s) 174
MspA1I CMGCKG 1 cut(s) 181
MspR9I CCNGG 1 cut(s) 278
MvaI CCWGG 1 cut(s) 278
MvnI CGCG 1 cut(s) 294
MwoI GCNNNNNNNGC 2 cut(s) 178, 184
NdeII GATC 1 cut(s) 219
NlaIII CATG 3 cut(s) 68, 120, 176
NsiI ATGCAT 1 cut(s) 174
NspI RCATGY 2 cut(s) 120, 176
PaeI GCATGC 1 cut(s) 120
PauI GCGCGC 1 cut(s) 292
PfeI GAWTC 1 cut(s) 154
PkrI GCNGC 3 cut(s) 180, 183, 186
PpuMI RGGWCCY 1 cut(s) 356
PsiI TTATAA 1 cut(s) 21
Psp5II RGGWCCY 1 cut(s) 356
Psp6I CCWGG 1 cut(s) 276
PspGI CCWGG 1 cut(s) 276
PspPI GGNCC 2 cut(s) 143, 356
PspPPI RGGWCCY 1 cut(s) 356
PstNI CAGNNNCTG 2 cut(s) 163, 184
PsuI RGATCY 1 cut(s) 219
PteI GCGCGC 1 cut(s) 292
PvuII CAGCTG 1 cut(s) 181
SatI GCNGC 3 cut(s) 179, 182, 185
Sau3AI GATC 1 cut(s) 219
Sau96I GGNCC 2 cut(s) 143, 356
ScrFI CCNGG 1 cut(s) 278
SetI ASST 9 cut(s) 52, 138, 183, 193, 211, 252, 279, 353, 361
SinI GGWCC 2 cut(s) 143, 356
SphI GCATGC 1 cut(s) 120
Sse9I AATT 3 cut(s) 5, 129, 330
StyD4I CCNGG 1 cut(s) 276
StyI CCWWGG 1 cut(s) 50
TaqI TCGA 1 cut(s) 318
TasI AATT 3 cut(s) 5, 129, 330
TfiI GAWTC 1 cut(s) 154
TseI GCWGC 3 cut(s) 178, 181, 184
TspDTI ATGAA 2 cut(s) 17, 253
VpaK11BI GGWCC 2 cut(s) 143, 356
XagI CCTNNNNNAGG 2 cut(s) 245, 351
XapI RAATTY 2 cut(s) 129, 330
XceI RCATGY 2 cut(s) 120, 176
Zsp2I ATGCAT 1 cut(s) 174
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.