U-box domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G16490 |
| fragaria_vesca | FvH4_3g00770 |
| malus_domestica | MD05G1359600.v1.1 MD07G1107900.v1.1 MD10G1335100.v1.1 MD11G1170200.v1.1 |
| prunus_persica | Prupe.4G008500_v2.0.a1 |
| pyrus_communis | pycom05g32470 pycom07g23150 pycom10g28490 pycom420g00300 |
| rosa_chinensis | RchiOBHm_Chr5g0001011 |
| rosa_laevigata | RLG00000030913 |
| rosa_multiflora | Rmu_co8233557.1_g000001 Rmu_sc0000255.1_g000025 Rmu_sc0028496.1_g000001 Rmu_sc0028497.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00075270 |
| rosa_rugosa | Rorug04G0388900 |
| rosa_samantha | Rh5AG008000 Rh5BG010200 Rh5CG008700 Rh5DG008700 |
| rosa_wichuraiana | Rw5G000830 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 157 |
| AcsI | RAATTY | 1 cut(s) | 226 |
| AgsI | TTSAA | 1 cut(s) | 244 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 217, 249 |
| AluBI | AGCT | 5 cut(s) | 16, 44, 94, 148, 168 |
| AluI | AGCT | 5 cut(s) | 16, 44, 94, 148, 168 |
| Alw21I | GWGCWC | 1 cut(s) | 197 |
| Alw26I | GTCTC | 1 cut(s) | 106 |
| ApeKI | GCWGC | 1 cut(s) | 13 |
| ApoI | RAATTY | 1 cut(s) | 226 |
| AspLEI | GCGC | 2 cut(s) | 138, 210 |
| BauI | CACGAG | 1 cut(s) | 272 |
| Bbv12I | GWGCWC | 1 cut(s) | 197 |
| BbvI | GCAGC | 1 cut(s) | 25 |
| BccI | CCATC | 1 cut(s) | 258 |
| BceAI | ACGGC | 2 cut(s) | 184, 221 |
| BcgI | CGANNNNNNTGC | 1 cut(s) | 36 |
| BcoDI | GTCTC | 1 cut(s) | 106 |
| BfaI | CTAG | 1 cut(s) | 216 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 205 |
| BisI | GCNGC | 1 cut(s) | 14 |
| BlsI | GCNGC | 1 cut(s) | 15 |
| BmsI | GCATC | 1 cut(s) | 258 |
| BsaJI | CCNNGG | 2 cut(s) | 139, 181 |
| BseDI | CCNNGG | 2 cut(s) | 139, 181 |
| BseGI | GGATG | 1 cut(s) | 273 |
| BseXI | GCAGC | 1 cut(s) | 25 |
| BsgI | GTGCAG | 1 cut(s) | 62 |
| Bsh1285I | CGRYCG | 1 cut(s) | 126 |
| BsiEI | CGRYCG | 1 cut(s) | 126 |
| BsiHKAI | GWGCWC | 1 cut(s) | 197 |
| BsmAI | GTCTC | 1 cut(s) | 106 |
| BsmBI | CGTCTC | 1 cut(s) | 106 |
| Bsp1286I | GDGCHC | 1 cut(s) | 197 |
| Bsp19I | CCATGG | 1 cut(s) | 181 |
| BspACI | CCGC | 1 cut(s) | 157 |
| BssECI | CCNNGG | 2 cut(s) | 139, 181 |
| BssSI | CACGAG | 1 cut(s) | 272 |
| BssT1I | CCWWGG | 1 cut(s) | 181 |
| Bst2BI | CACGAG | 1 cut(s) | 272 |
| BstC8I | GCNNGC | 3 cut(s) | 146, 150, 197 |
| BstDSI | CCRYGG | 1 cut(s) | 181 |
| BstF5I | GGATG | 1 cut(s) | 273 |
| BstHHI | GCGC | 2 cut(s) | 138, 210 |
| BstMAI | GTCTC | 1 cut(s) | 106 |
| BstMCI | CGRYCG | 1 cut(s) | 126 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 13, 22, 165, 205 |
| BstNSI | RCATGY | 1 cut(s) | 136 |
| BstV1I | GCAGC | 1 cut(s) | 25 |
| BtgI | CCRYGG | 1 cut(s) | 181 |
| BtsCI | GGATG | 1 cut(s) | 273 |
| Cac8I | GCNNGC | 3 cut(s) | 146, 150, 197 |
| CfoI | GCGC | 2 cut(s) | 138, 210 |
| CseI | GACGC | 1 cut(s) | 195 |
| CviAII | CATG | 3 cut(s) | 133, 182, 190 |
| CviJI | RGCY | 7 cut(s) | 16, 25, 44, 51, 94, 148, 168 |
| CviKI_1 | RGCY | 7 cut(s) | 16, 25, 44, 51, 94, 148, 168 |
| Eco130I | CCWWGG | 1 cut(s) | 181 |
| EcoT14I | CCWWGG | 1 cut(s) | 181 |
| ErhI | CCWWGG | 1 cut(s) | 181 |
| Esp3I | CGTCTC | 1 cut(s) | 106 |
| FaeI | CATG | 3 cut(s) | 136, 185, 193 |
| FaiI | YATR | 3 cut(s) | 134, 183, 191 |
| FatI | CATG | 3 cut(s) | 132, 181, 189 |
| Fnu4HI | GCNGC | 1 cut(s) | 14 |
| FokI | GGATG | 1 cut(s) | 280 |
| Fsp4HI | GCNGC | 1 cut(s) | 14 |
| FspBI | CTAG | 1 cut(s) | 216 |
| GlaI | GCGC | 2 cut(s) | 137, 209 |
| GluI | GCNGC | 1 cut(s) | 14 |
| HgaI | GACGC | 1 cut(s) | 195 |
| HhaI | GCGC | 2 cut(s) | 138, 210 |
| Hin1II | CATG | 3 cut(s) | 136, 185, 193 |
| Hin6I | GCGC | 2 cut(s) | 136, 208 |
| HinP1I | GCGC | 2 cut(s) | 136, 208 |
| HincII | GTYRAC | 1 cut(s) | 130 |
| HindII | GTYRAC | 1 cut(s) | 130 |
| HinfI | GANTC | 1 cut(s) | 119 |
| Hpy166II | GTNNAC | 2 cut(s) | 38, 130 |
| Hpy188I | TCNGA | 1 cut(s) | 106 |
| Hpy8I | GTNNAC | 2 cut(s) | 38, 130 |
| Hpy99I | CGWCG | 1 cut(s) | 24 |
| HpyCH4V | TGCA | 3 cut(s) | 7, 79, 271 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 13, 22, 165, 205 |
| Hsp92II | CATG | 3 cut(s) | 136, 185, 193 |
| HspAI | GCGC | 2 cut(s) | 136, 208 |
| LmnI | GCTCC | 1 cut(s) | 49 |
| LpnPI | CCDG | 2 cut(s) | 102, 232 |
| Lsp1109I | GCAGC | 1 cut(s) | 25 |
| LweI | GCATC | 1 cut(s) | 258 |
| MaeI | CTAG | 1 cut(s) | 216 |
| MaeIII | GTNAC | 1 cut(s) | 201 |
| MfeI | CAATTG | 1 cut(s) | 232 |
| MhlI | GDGCHC | 1 cut(s) | 197 |
| MluCI | AATT | 2 cut(s) | 226, 232 |
| MnlI | CCTC | 6 cut(s) | 78, 84, 149, 164, 268, 274 |
| MunI | CAATTG | 1 cut(s) | 232 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 13, 22, 165, 205 |
| NcoI | CCATGG | 1 cut(s) | 181 |
| NlaIII | CATG | 3 cut(s) | 136, 185, 193 |
| NmeAIII | GCCGAG | 1 cut(s) | 120 |
| NmuCI | GTSAC | 1 cut(s) | 201 |
| NspI | RCATGY | 1 cut(s) | 136 |
| PfeI | GAWTC | 1 cut(s) | 119 |
| PkrI | GCNGC | 1 cut(s) | 15 |
| SatI | GCNGC | 1 cut(s) | 14 |
| SduI | GDGCHC | 1 cut(s) | 197 |
| SetI | ASST | 9 cut(s) | 18, 46, 70, 96, 114, 150, 170, 217, 285 |
| SfaNI | GCATC | 1 cut(s) | 258 |
| Sse9I | AATT | 2 cut(s) | 226, 232 |
| SsiI | CCGC | 1 cut(s) | 157 |
| SspMI | CTAG | 1 cut(s) | 216 |
| StyI | CCWWGG | 1 cut(s) | 181 |
| TaqII | GACCGA | 1 cut(s) | 112 |
| TasI | AATT | 2 cut(s) | 226, 232 |
| TfiI | GAWTC | 1 cut(s) | 119 |
| TseFI | GTSAC | 1 cut(s) | 201 |
| TseI | GCWGC | 1 cut(s) | 13 |
| Tsp45I | GTSAC | 1 cut(s) | 201 |
| XapI | RAATTY | 1 cut(s) | 226 |
| XceI | RCATGY | 1 cut(s) | 136 |
| XspI | CTAG | 1 cut(s) | 216 |