pycom07g25410
MYB Family

Transcription factor ASG4-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Reverse (-)
25719497 .. 25723080
3584 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g25410.6

Sequence Viewer

Length: 1083 bp
ATGATCAAAACCAATTTGCCAGCCATGTTCATCATGTCGTCCTCCTTTTGTGAGAGCCGCAGCTCCTTTCGCTCTTTCAATAAAAAGAAAAATAAGAAAGGGAATCCGACTCTTCCGCAATTTATGGTATCCAAAAACCCGAACCCGCCAGAGGGCTTGTACTTGGATCCGAACGACAACGGCATGCCGTTGCCCGGACTCGGGCCGTTCGCCTCGGTCACTGCGACGACGTCGACGACGTCGTCTTCGGCGGAGGATCTGAGCAAGAAGATTCGGAAGCCCTACACAATTACCAAGTCCAGAGAGAGCTGGAGTGAGCCGGAGCACGACAAGTTCCTCGAAGCCCTCCAACTCTTCGATCGCGATTGGAAAAAGATTGAAGCTTTCATTGGGTCAAAGACGGTCATACAGATACGTAGTCATGCACAGAAGTATTTTCTGAAGGTTCAAAAGAATGGGACGAGCGAGCATCTACCGCCCCCTAGGCCAAAAAGGAAAGCTGCTCACCCGTATCCTCAAAAAGCTTCAAAAAATGCTCTGGCACTTCCGCCGGTATCTTGGTCATGTCAGTCTTCATCTGCTTTACTTGAATCTGGGTTTAATCAAAGGCCAGATTCATCATCAATGCTTATGAGTCCCATCCCCGGCCCTGTGGCCCCTTCCTGGCCTAATGGTTCTGTGCAAACAGCCAATCCATCTCATGAATCCAAAGTTGTTTCAGGGCCAACCGTGCCAAACAACAGTTGCAGTACCACAGAAAGCACCCCCAAAGCTCAACCAGTTGGTGGAACAACTGATCAAGTGAACCATAGCCATGCATTGAGAGTTCTTCCCGACTTTACTCAAGTATACGGATTCATTGGCAGCGTCTTTGACCCTAATGTTACAGGTCATCTTCAGAATCTGAAGAAGATGGATCCGATAGATGTTGAAACGGTGTTGCTGTTGATGAGAAACCTGTCCATGAATTTGACCAATCCCGAATTTGAGGATCATAGACAGTTGCTTTCATCCTACAAGATGGATGCGGATACAGGGAATCTCAGTGATGCAACTAAAACCCTTTGCGATCGATCAACATGA

Protein Analysis

361

Amino Acids

39.63

Weight (kDa)

9.27

Isoelectric Point (pI)

48.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0011669)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 241
AatII GACGTC 2 cut(s) 233, 242
AccB7I CCANNNNNTGG 1 cut(s) 785
AccI GTMKAC 2 cut(s) 233, 849
AccII CGCG 1 cut(s) 363
AciI CCGC 7 cut(s) 58, 116, 146, 251, 476, 548, 1028
AclWI GGATC 6 cut(s) 161, 174, 264, 911, 924, 999
AcsI RAATTY 2 cut(s) 967, 983
AcuI CTGAAG 3 cut(s) 461, 881, 926
AcyI GRCGYC 2 cut(s) 230, 239
AfaI GTAC 2 cut(s) 161, 751
AfiI CCNNNNNNNGG 8 cut(s) 151, 152, 194, 200, 201, 644, 663, 785
AgsI TTSAA 6 cut(s) 79, 380, 449, 528, 590, 932
AjnI CCWGG 1 cut(s) 662
AjuI GAANNNNNNNTTGG 2 cut(s) 372, 404
AluBI AGCT 6 cut(s) 63, 309, 383, 500, 524, 773
AluI AGCT 6 cut(s) 63, 309, 383, 500, 524, 773
Alw21I GWGCWC 1 cut(s) 327
AlwI GGATC 6 cut(s) 161, 174, 264, 911, 924, 999
AlwNI CAGNNNCTG 1 cut(s) 904
Ama87I CYCGRG 1 cut(s) 200
AoxI GGCC 7 cut(s) 203, 485, 608, 646, 654, 665, 722
ApeKI GCWGC 3 cut(s) 60, 500, 864
ApoI RAATTY 2 cut(s) 967, 983
ArsI GACNNNNNNTTYG 2 cut(s) 229, 261
AspA2I CCTAGG 1 cut(s) 482
AspS9I GGNCC 4 cut(s) 203, 647, 655, 722
AsuC2I CCSGG 2 cut(s) 195, 645
AsuHPI GGTGA 1 cut(s) 497
AvaI CYCGRG 1 cut(s) 200
AvrII CCTAGG 1 cut(s) 482
BamHI GGATCC 2 cut(s) 166, 916
BbsI GAAGAC 2 cut(s) 237, 564
Bbv12I GWGCWC 1 cut(s) 327
BbvI GCAGC 3 cut(s) 72, 487, 876
BccI CCATC 4 cut(s) 647, 703, 907, 1015
BceAI ACGGC 3 cut(s) 172, 190, 196
BciT130I CCWGG 1 cut(s) 664
BciVI GTATCC 3 cut(s) 139, 522, 1024
BclI TGATCA 2 cut(s) 3, 796
BcnI CCSGG 2 cut(s) 195, 645
BfaI CTAG 1 cut(s) 483
BfuI GTATCC 3 cut(s) 139, 522, 1024
BglI GCCNNNNNGGC 1 cut(s) 484
BisI GCNGC 4 cut(s) 58, 61, 501, 865
BlnI CCTAGG 1 cut(s) 482
BlsI GCNGC 4 cut(s) 59, 62, 502, 866
Bme1390I CCNGG 3 cut(s) 195, 645, 664
BmeT110I CYCGRG 1 cut(s) 200
BmgT120I GGNCC 4 cut(s) 203, 647, 655, 722
BmiI GGNNCC 3 cut(s) 168, 657, 918
BmrFI CCNGG 3 cut(s) 195, 645, 664
BmsI GCATC 3 cut(s) 478, 1015, 1039
BpiI GAAGAC 2 cut(s) 237, 564
BpmI CTGGAG 1 cut(s) 331
BpuEI CTTGAG 1 cut(s) 828
BpuMI CCSGG 2 cut(s) 195, 645
Bsa29I ATCGAT 1 cut(s) 1072
BsaAI YACGTR 1 cut(s) 416
BsaHI GRCGYC 2 cut(s) 230, 239
BsaJI CCNNGG 3 cut(s) 213, 482, 643
Bsc4I CCNNNNNNNGG 8 cut(s) 151, 152, 194, 200, 201, 644, 663, 785
Bse118I RCCGGY 1 cut(s) 550
Bse1I ACTGG 1 cut(s) 779
BseBI CCWGG 1 cut(s) 664
BseCI ATCGAT 1 cut(s) 1072
BseDI CCNNGG 3 cut(s) 213, 482, 643
BseGI GGATG 3 cut(s) 639, 1010, 1030
BseLI CCNNNNNNNGG 8 cut(s) 151, 152, 194, 200, 201, 644, 663, 785
BseMII CTCAG 2 cut(s) 251, 1057
BseNI ACTGG 1 cut(s) 779
BseXI GCAGC 3 cut(s) 72, 487, 876
Bsh1236I CGCG 1 cut(s) 363
Bsh1285I CGRYCG 2 cut(s) 361, 1072
BshFI GGCC 7 cut(s) 205, 487, 610, 648, 656, 667, 724
BshVI ATCGAT 1 cut(s) 1072
BsiEI CGRYCG 2 cut(s) 361, 1072
BsiHKAI GWGCWC 1 cut(s) 327
BsiHKCI CYCGRG 1 cut(s) 200
BsiSI CCGG 4 cut(s) 195, 320, 551, 645
BslFI GGGAC 2 cut(s) 472, 621
BslI CCNNNNNNNGG 8 cut(s) 151, 152, 194, 200, 201, 644, 663, 785
BsmFI GGGAC 2 cut(s) 472, 621
BsnI GGCC 7 cut(s) 205, 487, 610, 648, 656, 667, 724
BsoBI CYCGRG 1 cut(s) 200
Bsp1286I GDGCHC 1 cut(s) 327
Bsp143I GATC 9 cut(s) 3, 166, 256, 358, 796, 916, 991, 1069, 1073
Bsp68I TCGCGA 1 cut(s) 363
BspACI CCGC 7 cut(s) 58, 116, 146, 251, 476, 548, 1028
BspANI GGCC 7 cut(s) 205, 487, 610, 648, 656, 667, 724
BspCNI CTCAG 2 cut(s) 252, 1056
BspDI ATCGAT 1 cut(s) 1072
BspFNI CGCG 1 cut(s) 363
BspHI TCATGA 1 cut(s) 700
BspLI GGNNCC 3 cut(s) 168, 657, 918
BspPI GGATC 6 cut(s) 161, 174, 264, 911, 924, 999
BsrFI RCCGGY 1 cut(s) 550
BsrI ACTGG 1 cut(s) 779
BssAI RCCGGY 1 cut(s) 550
BssECI CCNNGG 3 cut(s) 213, 482, 643
BssMI GATC 9 cut(s) 3, 166, 256, 358, 796, 916, 991, 1069, 1073
BssNAI GTATAC 1 cut(s) 850
BssNI GRCGYC 2 cut(s) 230, 239
BssT1I CCWWGG 1 cut(s) 482
Bst1107I GTATAC 1 cut(s) 850
Bst2UI CCWGG 1 cut(s) 664
Bst4CI ACNGT 5 cut(s) 403, 730, 743, 937, 1002
Bst6I CTCTTC 2 cut(s) 117, 359
BstACI GRCGYC 2 cut(s) 230, 239
BstBAI YACGTR 1 cut(s) 416
BstC8I GCNNGC 3 cut(s) 21, 185, 467
BstDEI CTNAG 2 cut(s) 260, 1043
BstF5I GGATG 3 cut(s) 639, 1010, 1030
BstFNI CGCG 1 cut(s) 363
BstKTI GATC 9 cut(s) 6, 169, 259, 361, 799, 919, 994, 1072, 1076
BstMBI GATC 9 cut(s) 3, 166, 256, 358, 796, 916, 991, 1069, 1073
BstMCI CGRYCG 2 cut(s) 361, 1072
BstMWI GCNNNNNNNGC 4 cut(s) 69, 475, 484, 730
BstNI CCWGG 1 cut(s) 664
BstNSI RCATGY 1 cut(s) 187
BstSCI CCNGG 3 cut(s) 193, 643, 662
BstSNI TACGTA 1 cut(s) 416
BstUI CGCG 1 cut(s) 363
BstV1I GCAGC 3 cut(s) 72, 487, 876
BstV2I GAAGAC 2 cut(s) 237, 564
BstX2I RGATCY 3 cut(s) 166, 256, 916
BstYI RGATCY 3 cut(s) 166, 256, 916
BstZ17I GTATAC 1 cut(s) 850
Bsu15I ATCGAT 1 cut(s) 1072
BsuI GTATCC 3 cut(s) 139, 522, 1024
BsuRI GGCC 7 cut(s) 205, 487, 610, 648, 656, 667, 724
BsuTUI ATCGAT 1 cut(s) 1072
BtsCI GGATG 3 cut(s) 639, 1010, 1030
BtsI GCAGTG 1 cut(s) 219
BtsIMutI CAGTG 2 cut(s) 219, 1051
BtuMI TCGCGA 1 cut(s) 363
Cac8I GCNNGC 3 cut(s) 21, 185, 467
CaiI CAGNNNCTG 1 cut(s) 904
CciI TCATGA 1 cut(s) 700
Cfr10I RCCGGY 1 cut(s) 550
Cfr13I GGNCC 4 cut(s) 203, 647, 655, 722
ClaI ATCGAT 1 cut(s) 1072
CseI GACGC 1 cut(s) 856
Csp6I GTAC 2 cut(s) 160, 750
CviAII CATG 9 cut(s) 25, 34, 184, 422, 564, 701, 815, 964, 1080
CviQI GTAC 2 cut(s) 160, 750
DdeI CTNAG 2 cut(s) 260, 1043
DpnI GATC 9 cut(s) 5, 168, 258, 360, 798, 918, 993, 1071, 1075
DpnII GATC 9 cut(s) 3, 166, 256, 358, 796, 916, 991, 1069, 1073
DrdI GACNNNNNNGTC 1 cut(s) 241
DseDI GACNNNNNNGTC 1 cut(s) 241
Eam1104I CTCTTC 2 cut(s) 117, 359
EarI CTCTTC 2 cut(s) 117, 359
EciI GGCGGA 2 cut(s) 266, 537
Eco105I TACGTA 1 cut(s) 416
Eco130I CCWWGG 1 cut(s) 482
Eco57I CTGAAG 3 cut(s) 461, 881, 926
Eco88I CYCGRG 1 cut(s) 200
EcoRII CCWGG 1 cut(s) 662
EcoT14I CCWWGG 1 cut(s) 482
EcoT22I ATGCAT 1 cut(s) 820
ErhI CCWWGG 1 cut(s) 482
FaeI CATG 9 cut(s) 28, 37, 187, 425, 567, 704, 818, 967, 1083
FaqI GGGAC 2 cut(s) 472, 621
FatI CATG 9 cut(s) 24, 33, 183, 421, 563, 700, 814, 963, 1079
FauI CCCGC 1 cut(s) 153
FbaI TGATCA 2 cut(s) 3, 796
FblI GTMKAC 2 cut(s) 233, 849
Fnu4HI GCNGC 4 cut(s) 58, 61, 501, 865
FokI GGATG 3 cut(s) 626, 997, 1037
Fsp4HI GCNGC 4 cut(s) 58, 61, 501, 865
FspBI CTAG 1 cut(s) 483
GluI GCNGC 4 cut(s) 58, 61, 501, 865
GsuI CTGGAG 1 cut(s) 331
HaeIII GGCC 7 cut(s) 205, 487, 610, 648, 656, 667, 724
HapII CCGG 4 cut(s) 195, 320, 551, 645
HgaI GACGC 1 cut(s) 856
Hin1I GRCGYC 2 cut(s) 230, 239
Hin1II CATG 9 cut(s) 28, 37, 187, 425, 567, 704, 818, 967, 1083
HincII GTYRAC 1 cut(s) 234
HindII GTYRAC 1 cut(s) 234
HindIII AAGCTT 2 cut(s) 381, 522
HpaII CCGG 4 cut(s) 195, 320, 551, 645
HphI GGTGA 1 cut(s) 497
Hpy166II GTNNAC 3 cut(s) 234, 805, 850
Hpy188I TCNGA 8 cut(s) 108, 171, 261, 276, 441, 900, 906, 921
Hpy188III TCNNGA 5 cut(s) 300, 362, 701, 833, 980
Hpy8I GTNNAC 3 cut(s) 234, 805, 850
Hpy99I CGWCG 6 cut(s) 229, 232, 235, 238, 241, 244
HpyAV CCTTC 2 cut(s) 436, 669
HpyCH4III ACNGT 5 cut(s) 403, 730, 743, 937, 1002
HpyCH4IV ACGT 3 cut(s) 230, 239, 415
HpyCH4V TGCA 5 cut(s) 425, 682, 747, 818, 1052
HpyF10VI GCNNNNNNNGC 4 cut(s) 69, 475, 484, 730
HpyF3I CTNAG 2 cut(s) 260, 1043
HpySE526I ACGT 3 cut(s) 230, 239, 415
Hsp92I GRCGYC 2 cut(s) 230, 239
Hsp92II CATG 9 cut(s) 28, 37, 187, 425, 567, 704, 818, 967, 1083
Ksp22I TGATCA 2 cut(s) 3, 796
Kzo9I GATC 9 cut(s) 3, 166, 256, 358, 796, 916, 991, 1069, 1073
LmnI GCTCC 2 cut(s) 68, 322
Lsp1109I GCAGC 3 cut(s) 72, 487, 876
LweI GCATC 3 cut(s) 478, 1015, 1039
MaeI CTAG 1 cut(s) 483
MaeII ACGT 3 cut(s) 230, 239, 415
MaeIII GTNAC 2 cut(s) 217, 883
MalI GATC 9 cut(s) 5, 168, 258, 360, 798, 918, 993, 1071, 1075
MboI GATC 9 cut(s) 3, 166, 256, 358, 796, 916, 991, 1069, 1073
MboII GAAGA 9 cut(s) 104, 237, 280, 346, 564, 821, 887, 919, 922
MflI RGATCY 3 cut(s) 166, 256, 916
MhlI GDGCHC 1 cut(s) 327
MluCI AATT 5 cut(s) 13, 119, 288, 967, 983
MlyI GAGTC 3 cut(s) 103, 192, 643
MmeI TCCRAC 2 cut(s) 131, 373
MnlI CCTC 8 cut(s) 52, 145, 223, 247, 347, 356, 525, 982
Mph1103I ATGCAT 1 cut(s) 820
MseI TTAA 1 cut(s) 600
MslI CAYNNNNRTG 1 cut(s) 813
MspI CCGG 4 cut(s) 195, 320, 551, 645
MspR9I CCNGG 3 cut(s) 195, 645, 664
MvaI CCWGG 1 cut(s) 664
MvnI CGCG 1 cut(s) 363
MwoI GCNNNNNNNGC 4 cut(s) 69, 475, 484, 730
NciI CCSGG 2 cut(s) 195, 645
NdeII GATC 9 cut(s) 3, 166, 256, 358, 796, 916, 991, 1069, 1073
NlaIII CATG 9 cut(s) 28, 37, 187, 425, 567, 704, 818, 967, 1083
NlaIV GGNNCC 3 cut(s) 168, 657, 918
NmuCI GTSAC 1 cut(s) 217
NruI TCGCGA 1 cut(s) 363
NsiI ATGCAT 1 cut(s) 820
NspI RCATGY 1 cut(s) 187
PaeI GCATGC 1 cut(s) 187
PagI TCATGA 1 cut(s) 700
PcsI WCGNNNNNNNCGW 4 cut(s) 221, 233, 236, 239
PfeI GAWTC 8 cut(s) 103, 271, 590, 614, 704, 855, 901, 1039
PflFI GACNNNGTC 3 cut(s) 229, 238, 241
PflMI CCANNNNNTGG 1 cut(s) 785
PkrI GCNGC 4 cut(s) 59, 62, 502, 866
Ple19I CGATCG 2 cut(s) 361, 1072
PleI GAGTC 3 cut(s) 103, 192, 642
PpsI GAGTC 3 cut(s) 103, 192, 642
Ppu21I YACGTR 1 cut(s) 416
Psp6I CCWGG 1 cut(s) 662
PspGI CCWGG 1 cut(s) 662
PspN4I GGNNCC 3 cut(s) 168, 657, 918
PspPI GGNCC 4 cut(s) 203, 647, 655, 722
PstNI CAGNNNCTG 1 cut(s) 904
PsuI RGATCY 3 cut(s) 166, 256, 916
PsyI GACNNNGTC 3 cut(s) 229, 238, 241
PvuI CGATCG 2 cut(s) 361, 1072
RruI TCGCGA 1 cut(s) 363
RsaI GTAC 2 cut(s) 161, 751
RsaNI GTAC 2 cut(s) 160, 750
RseI CAYNNNNRTG 1 cut(s) 813
SalI GTCGAC 1 cut(s) 232
SaqAI TTAA 1 cut(s) 600
SatI GCNGC 4 cut(s) 58, 61, 501, 865
Sau3AI GATC 9 cut(s) 3, 166, 256, 358, 796, 916, 991, 1069, 1073
Sau96I GGNCC 4 cut(s) 203, 647, 655, 722
SchI GAGTC 3 cut(s) 103, 192, 643
ScrFI CCNGG 3 cut(s) 195, 645, 664
SduI GDGCHC 1 cut(s) 327
SfaNI GCATC 3 cut(s) 478, 1015, 1039
SgrDI CGTCGACG 1 cut(s) 232
SmiMI CAYNNNNRTG 1 cut(s) 813
SmlI CTYRAG 1 cut(s) 843
SmoI CTYRAG 1 cut(s) 843
SnaBI TACGTA 1 cut(s) 416
SphI GCATGC 1 cut(s) 187
Sse9I AATT 5 cut(s) 13, 119, 288, 967, 983
SsiI CCGC 7 cut(s) 58, 116, 146, 251, 476, 548, 1028
SspMI CTAG 1 cut(s) 483
StyD4I CCNGG 3 cut(s) 193, 643, 662
StyI CCWWGG 1 cut(s) 482
TaaI ACNGT 5 cut(s) 403, 730, 743, 937, 1002
TaiI ACGT 3 cut(s) 233, 242, 418
TaqI TCGA 4 cut(s) 233, 339, 357, 1072
TaqII GACCGA 1 cut(s) 205
TasI AATT 5 cut(s) 13, 119, 288, 967, 983
TatI WGTACW 1 cut(s) 159
TauI GCSGC 1 cut(s) 60
TfiI GAWTC 8 cut(s) 103, 271, 590, 614, 704, 855, 901, 1039
Tru1I TTAA 1 cut(s) 600
Tru9I TTAA 1 cut(s) 600
TscAI CASTG 2 cut(s) 226, 1051
TseFI GTSAC 1 cut(s) 217
TseI GCWGC 3 cut(s) 60, 500, 864
Tsp45I GTSAC 1 cut(s) 217
TspDTI ATGAA 8 cut(s) 19, 376, 564, 606, 717, 847, 980, 999
TspGWI ACGGA 1 cut(s) 867
TspRI CASTG 2 cut(s) 226, 1051
Tth111I GACNNNGTC 3 cut(s) 229, 238, 241
Van91I CCANNNNNTGG 1 cut(s) 785
XapI RAATTY 2 cut(s) 967, 983
XceI RCATGY 1 cut(s) 187
XmaJI CCTAGG 1 cut(s) 482
XmiI GTMKAC 2 cut(s) 233, 849
XspI CTAG 1 cut(s) 483
ZraI GACGTC 2 cut(s) 231, 240
Zsp2I ATGCAT 1 cut(s) 820
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.