Tubby-like F-box protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G47270 AT1G47270 AT1G47270 |
| fragaria_vesca | FvH4_2g39640 FvH4_2g39640 |
| malus_domestica | MD08G1029900.v1.1 MD08G1030000.v1.1 MD15G1025400.v1.1 |
| prunus_persica | Prupe.1G377700_v2.0.a1 Prupe.1G377700_v2.0.a1 |
| pyrus_communis | pycom08g02380 pycom15g02180 |
| rosa_chinensis | RchiOBHm_Chr6g0301261 |
| rosa_laevigata | RLG00000011266 |
| rosa_multiflora | Rmu_sc0013354.1_g000013 |
| rosa_roxburghii | Rroxscaffold_171G00441300 Rroxscaffold_7G00167020 |
| rosa_rugosa | Rorug06G0302800 |
| rosa_samantha | Rh6AG416300 Rh6BG423000 Rh6CG430600 Rh6DG416000 |
| rosa_wichuraiana | Rw6G036040 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 709 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1069 |
| AccBSI | CCGCTC | 1 cut(s) | 446 |
| AccII | CGCG | 3 cut(s) | 94, 210, 1035 |
| AciI | CCGC | 2 cut(s) | 97, 444 |
| AclWI | GGATC | 3 cut(s) | 373, 901, 953 |
| AcoI | YGGCCR | 1 cut(s) | 1071 |
| AcsI | RAATTY | 3 cut(s) | 539, 1021, 1057 |
| AfaI | GTAC | 3 cut(s) | 428, 508, 1078 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 629, 757, 934, 1069 |
| AflIII | ACRYGT | 3 cut(s) | 15, 208, 1033 |
| AgsI | TTSAA | 5 cut(s) | 10, 414, 812, 888, 973 |
| AjnI | CCWGG | 1 cut(s) | 230 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 868, 900 |
| AluBI | AGCT | 8 cut(s) | 28, 104, 711, 739, 904, 1003, 1066, 1218 |
| AluI | AGCT | 8 cut(s) | 28, 104, 711, 739, 904, 1003, 1066, 1218 |
| Alw21I | GWGCWC | 2 cut(s) | 741, 920 |
| Alw26I | GTCTC | 2 cut(s) | 218, 349 |
| AlwI | GGATC | 3 cut(s) | 373, 901, 953 |
| Ama87I | CYCGRG | 1 cut(s) | 546 |
| AoxI | GGCC | 3 cut(s) | 233, 1044, 1071 |
| ApeKI | GCWGC | 7 cut(s) | 355, 479, 530, 901, 1000, 1003, 1215 |
| ApoI | RAATTY | 3 cut(s) | 539, 1021, 1057 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1058 |
| AspLEI | GCGC | 1 cut(s) | 96 |
| AspS9I | GGNCC | 2 cut(s) | 362, 761 |
| AsuC2I | CCSGG | 1 cut(s) | 360 |
| AsuHPI | GGTGA | 1 cut(s) | 132 |
| AvaI | CYCGRG | 1 cut(s) | 546 |
| AvaII | GGWCC | 2 cut(s) | 362, 761 |
| BanII | GRGCYC | 1 cut(s) | 741 |
| BauI | CACGAG | 1 cut(s) | 23 |
| Bbv12I | GWGCWC | 2 cut(s) | 741, 920 |
| BbvI | GCAGC | 7 cut(s) | 367, 491, 517, 913, 990, 1012, 1227 |
| BccI | CCATC | 1 cut(s) | 984 |
| BciT130I | CCWGG | 1 cut(s) | 232 |
| BciVI | GTATCC | 1 cut(s) | 690 |
| BcnI | CCSGG | 1 cut(s) | 360 |
| BcoDI | GTCTC | 2 cut(s) | 218, 349 |
| BfaI | CTAG | 2 cut(s) | 921, 987 |
| BfmI | CTRYAG | 3 cut(s) | 531, 712, 1004 |
| BfuAI | ACCTGC | 1 cut(s) | 709 |
| BfuI | GTATCC | 1 cut(s) | 690 |
| BisI | GCNGC | 8 cut(s) | 97, 356, 480, 531, 902, 1001, 1004, 1216 |
| BlpI | GCTNAGC | 1 cut(s) | 634 |
| BlsI | GCNGC | 8 cut(s) | 98, 357, 481, 532, 903, 1002, 1005, 1217 |
| Bme1390I | CCNGG | 2 cut(s) | 232, 360 |
| Bme18I | GGWCC | 2 cut(s) | 362, 761 |
| BmeT110I | CYCGRG | 1 cut(s) | 546 |
| BmgT120I | GGNCC | 2 cut(s) | 362, 761 |
| BmiI | GGNNCC | 4 cut(s) | 363, 595, 762, 984 |
| BmrFI | CCNGG | 2 cut(s) | 232, 360 |
| BmsI | GCATC | 1 cut(s) | 789 |
| BpmI | CTGGAG | 1 cut(s) | 297 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 634 |
| BpuEI | CTTGAG | 2 cut(s) | 335, 1231 |
| BpuMI | CCSGG | 1 cut(s) | 360 |
| BsaJI | CCNNGG | 5 cut(s) | 430, 525, 692, 764, 1041 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 673, 703 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 629, 757, 934, 1069 |
| Bse118I | RCCGGY | 1 cut(s) | 1073 |
| Bse3DI | GCAATG | 2 cut(s) | 114, 326 |
| BseBI | CCWGG | 1 cut(s) | 232 |
| BseDI | CCNNGG | 5 cut(s) | 430, 525, 692, 764, 1041 |
| BseGI | GGATG | 3 cut(s) | 373, 463, 744 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 629, 757, 934, 1069 |
| BseMI | GCAATG | 2 cut(s) | 114, 326 |
| BseMII | CTCAG | 1 cut(s) | 648 |
| BseRI | GAGGAG | 1 cut(s) | 84 |
| BseXI | GCAGC | 7 cut(s) | 367, 491, 517, 913, 990, 1012, 1227 |
| Bsh1236I | CGCG | 3 cut(s) | 94, 210, 1035 |
| BshFI | GGCC | 3 cut(s) | 235, 1046, 1073 |
| BsiHKAI | GWGCWC | 2 cut(s) | 741, 920 |
| BsiHKCI | CYCGRG | 1 cut(s) | 546 |
| BsiSI | CCGG | 2 cut(s) | 359, 1074 |
| BslFI | GGGAC | 3 cut(s) | 375, 774, 911 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 629, 757, 934, 1069 |
| BsmAI | GTCTC | 2 cut(s) | 218, 349 |
| BsmFI | GGGAC | 3 cut(s) | 375, 774, 911 |
| BsmI | GAATGC | 1 cut(s) | 777 |
| BsnI | GGCC | 3 cut(s) | 235, 1046, 1073 |
| BsoBI | CYCGRG | 1 cut(s) | 546 |
| Bsp1286I | GDGCHC | 2 cut(s) | 741, 920 |
| Bsp143I | GATC | 5 cut(s) | 370, 378, 893, 958, 1140 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 634 |
| BspACI | CCGC | 2 cut(s) | 97, 444 |
| BspANI | GGCC | 3 cut(s) | 235, 1046, 1073 |
| BspCNI | CTCAG | 1 cut(s) | 647 |
| BspFNI | CGCG | 3 cut(s) | 94, 210, 1035 |
| BspLI | GGNNCC | 4 cut(s) | 363, 595, 762, 984 |
| BspMAI | CTGCAG | 2 cut(s) | 535, 1008 |
| BspMI | ACCTGC | 1 cut(s) | 709 |
| BspPI | GGATC | 3 cut(s) | 373, 901, 953 |
| BsrBI | CCGCTC | 1 cut(s) | 446 |
| BsrDI | GCAATG | 2 cut(s) | 114, 326 |
| BsrFI | RCCGGY | 1 cut(s) | 1073 |
| BssAI | RCCGGY | 1 cut(s) | 1073 |
| BssECI | CCNNGG | 5 cut(s) | 430, 525, 692, 764, 1041 |
| BssMI | GATC | 5 cut(s) | 370, 378, 893, 958, 1140 |
| BssSI | CACGAG | 1 cut(s) | 23 |
| BssT1I | CCWWGG | 4 cut(s) | 430, 525, 692, 764 |
| Bst2BI | CACGAG | 1 cut(s) | 23 |
| Bst2UI | CCWGG | 1 cut(s) | 232 |
| Bst4CI | ACNGT | 6 cut(s) | 426, 607, 617, 685, 727, 1042 |
| Bst6I | CTCTTC | 2 cut(s) | 61, 72 |
| BstC8I | GCNNGC | 6 cut(s) | 237, 329, 477, 553, 906, 1237 |
| BstDEI | CTNAG | 3 cut(s) | 437, 634, 897 |
| BstDSI | CCRYGG | 1 cut(s) | 1041 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 627 |
| BstF5I | GGATG | 3 cut(s) | 373, 463, 744 |
| BstFNI | CGCG | 3 cut(s) | 94, 210, 1035 |
| BstHHI | GCGC | 1 cut(s) | 96 |
| BstKTI | GATC | 5 cut(s) | 373, 381, 896, 961, 1143 |
| BstMAI | GTCTC | 2 cut(s) | 218, 349 |
| BstMBI | GATC | 5 cut(s) | 370, 378, 893, 958, 1140 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 1000, 1193, 1215 |
| BstNI | CCWGG | 1 cut(s) | 232 |
| BstNSI | RCATGY | 2 cut(s) | 884, 1239 |
| BstSCI | CCNGG | 2 cut(s) | 230, 358 |
| BstSFI | CTRYAG | 3 cut(s) | 531, 712, 1004 |
| BstUI | CGCG | 3 cut(s) | 94, 210, 1035 |
| BstV1I | GCAGC | 7 cut(s) | 367, 491, 517, 913, 990, 1012, 1227 |
| BstX2I | RGATCY | 2 cut(s) | 893, 958 |
| BstYI | RGATCY | 2 cut(s) | 893, 958 |
| BsuI | GTATCC | 1 cut(s) | 690 |
| BsuRI | GGCC | 3 cut(s) | 235, 1046, 1073 |
| BtgI | CCRYGG | 1 cut(s) | 1041 |
| BtsCI | GGATG | 3 cut(s) | 373, 463, 744 |
| BtsI | GCAGTG | 2 cut(s) | 782, 1013 |
| BtsIMutI | CAGTG | 2 cut(s) | 782, 1013 |
| BveI | ACCTGC | 1 cut(s) | 709 |
| Cac8I | GCNNGC | 6 cut(s) | 237, 329, 477, 553, 906, 1237 |
| CfoI | GCGC | 1 cut(s) | 96 |
| Cfr10I | RCCGGY | 1 cut(s) | 1073 |
| Cfr13I | GGNCC | 2 cut(s) | 362, 761 |
| CseI | GACGC | 2 cut(s) | 199, 1041 |
| Csp6I | GTAC | 3 cut(s) | 427, 507, 1077 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 146, 181, 951, 986 |
| CviAII | CATG | 6 cut(s) | 279, 784, 881, 995, 1086, 1236 |
| CviQI | GTAC | 3 cut(s) | 427, 507, 1077 |
| DdeI | CTNAG | 3 cut(s) | 437, 634, 897 |
| DpnI | GATC | 5 cut(s) | 372, 380, 895, 960, 1142 |
| DpnII | GATC | 5 cut(s) | 370, 378, 893, 958, 1140 |
| DraI | TTTAAA | 1 cut(s) | 1027 |
| EaeI | YGGCCR | 1 cut(s) | 1071 |
| Eam1104I | CTCTTC | 2 cut(s) | 61, 72 |
| EarI | CTCTTC | 2 cut(s) | 61, 72 |
| Ecl136II | GAGCTC | 1 cut(s) | 739 |
| Eco130I | CCWWGG | 4 cut(s) | 430, 525, 692, 764 |
| Eco24I | GRGCYC | 1 cut(s) | 741 |
| Eco47I | GGWCC | 2 cut(s) | 362, 761 |
| Eco53kI | GAGCTC | 1 cut(s) | 739 |
| Eco88I | CYCGRG | 1 cut(s) | 546 |
| EcoICRI | GAGCTC | 1 cut(s) | 739 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 627 |
| EcoRI | GAATTC | 1 cut(s) | 539 |
| EcoRII | CCWGG | 1 cut(s) | 230 |
| EcoT14I | CCWWGG | 4 cut(s) | 430, 525, 692, 764 |
| EcoT22I | ATGCAT | 1 cut(s) | 882 |
| EcoT38I | GRGCYC | 1 cut(s) | 741 |
| ErhI | CCWWGG | 4 cut(s) | 430, 525, 692, 764 |
| FaeI | CATG | 6 cut(s) | 282, 787, 884, 998, 1089, 1239 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 394, 426, 544, 576 |
| FaqI | GGGAC | 3 cut(s) | 375, 774, 911 |
| FatI | CATG | 6 cut(s) | 278, 783, 880, 994, 1085, 1235 |
| FauI | CCCGC | 1 cut(s) | 451 |
| Fnu4HI | GCNGC | 8 cut(s) | 97, 356, 480, 531, 902, 1001, 1004, 1216 |
| FokI | GGATG | 3 cut(s) | 360, 470, 731 |
| FriOI | GRGCYC | 1 cut(s) | 741 |
| Fsp4HI | GCNGC | 8 cut(s) | 97, 356, 480, 531, 902, 1001, 1004, 1216 |
| FspBI | CTAG | 2 cut(s) | 921, 987 |
| GlaI | GCGC | 1 cut(s) | 95 |
| GluI | GCNGC | 8 cut(s) | 97, 356, 480, 531, 902, 1001, 1004, 1216 |
| GsuI | CTGGAG | 1 cut(s) | 297 |
| HaeIII | GGCC | 3 cut(s) | 235, 1046, 1073 |
| HapII | CCGG | 2 cut(s) | 359, 1074 |
| HgaI | GACGC | 2 cut(s) | 199, 1041 |
| HhaI | GCGC | 1 cut(s) | 96 |
| Hin1II | CATG | 6 cut(s) | 282, 787, 884, 998, 1089, 1239 |
| Hin6I | GCGC | 1 cut(s) | 94 |
| HinP1I | GCGC | 1 cut(s) | 94 |
| HinfI | GANTC | 2 cut(s) | 310, 673 |
| HpaII | CCGG | 2 cut(s) | 359, 1074 |
| HphI | GGTGA | 1 cut(s) | 132 |
| Hpy166II | GTNNAC | 2 cut(s) | 509, 603 |
| Hpy188I | TCNGA | 5 cut(s) | 243, 378, 494, 752, 1020 |
| Hpy188III | TCNNGA | 8 cut(s) | 23, 63, 194, 307, 314, 546, 812, 1135 |
| Hpy8I | GTNNAC | 2 cut(s) | 509, 603 |
| Hpy99I | CGWCG | 1 cut(s) | 215 |
| HpyAV | CCTTC | 4 cut(s) | 346, 489, 809, 866 |
| HpyCH4III | ACNGT | 6 cut(s) | 426, 607, 617, 685, 727, 1042 |
| HpyCH4IV | ACGT | 4 cut(s) | 15, 131, 416, 564 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 1000, 1193, 1215 |
| HpyF3I | CTNAG | 3 cut(s) | 437, 634, 897 |
| HpySE526I | ACGT | 4 cut(s) | 15, 131, 416, 564 |
| Hsp92II | CATG | 6 cut(s) | 282, 787, 884, 998, 1089, 1239 |
| HspAI | GCGC | 1 cut(s) | 94 |
| Kzo9I | GATC | 5 cut(s) | 370, 378, 893, 958, 1140 |
| LmnI | GCTCC | 3 cut(s) | 832, 943, 988 |
| Lsp1109I | GCAGC | 7 cut(s) | 367, 491, 517, 913, 990, 1012, 1227 |
| LweI | GCATC | 1 cut(s) | 789 |
| MaeI | CTAG | 2 cut(s) | 921, 987 |
| MaeII | ACGT | 4 cut(s) | 15, 131, 416, 564 |
| MaeIII | GTNAC | 2 cut(s) | 731, 1036 |
| MalI | GATC | 5 cut(s) | 372, 380, 895, 960, 1142 |
| MbiI | CCGCTC | 1 cut(s) | 446 |
| MboI | GATC | 5 cut(s) | 370, 378, 893, 958, 1140 |
| MboII | GAAGA | 5 cut(s) | 67, 78, 89, 1066, 1150 |
| MflI | RGATCY | 2 cut(s) | 893, 958 |
| MhlI | GDGCHC | 2 cut(s) | 741, 920 |
| MluCI | AATT | 9 cut(s) | 539, 556, 572, 583, 649, 792, 1021, 1057, 1130 |
| MluI | ACGCGT | 2 cut(s) | 208, 1033 |
| MlyI | GAGTC | 1 cut(s) | 304 |
| MmeI | TCCRAC | 3 cut(s) | 229, 547, 860 |
| Mph1103I | ATGCAT | 1 cut(s) | 882 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1058 |
| MseI | TTAA | 3 cut(s) | 393, 575, 1026 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1240 |
| MspA1I | CMGCKG | 2 cut(s) | 1003, 1066 |
| MspI | CCGG | 2 cut(s) | 359, 1074 |
| MspR9I | CCNGG | 2 cut(s) | 232, 360 |
| Mva1269I | GAATGC | 1 cut(s) | 777 |
| MvaI | CCWGG | 1 cut(s) | 232 |
| MvnI | CGCG | 3 cut(s) | 94, 210, 1035 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 1000, 1193, 1215 |
| NciI | CCSGG | 1 cut(s) | 360 |
| NdeII | GATC | 5 cut(s) | 370, 378, 893, 958, 1140 |
| NlaIII | CATG | 6 cut(s) | 282, 787, 884, 998, 1089, 1239 |
| NlaIV | GGNNCC | 4 cut(s) | 363, 595, 762, 984 |
| NmeAIII | GCCGAG | 1 cut(s) | 125 |
| NsiI | ATGCAT | 1 cut(s) | 882 |
| NspI | RCATGY | 2 cut(s) | 884, 1239 |
| PaeI | GCATGC | 1 cut(s) | 1239 |
| PaeR7I | CTCGAG | 1 cut(s) | 546 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 21, 30 |
| PctI | GAATGC | 1 cut(s) | 777 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1058 |
| PfeI | GAWTC | 1 cut(s) | 673 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1069 |
| PkrI | GCNGC | 8 cut(s) | 98, 357, 481, 532, 903, 1002, 1005, 1217 |
| PleI | GAGTC | 1 cut(s) | 304 |
| PpsI | GAGTC | 1 cut(s) | 304 |
| Psp124BI | GAGCTC | 1 cut(s) | 741 |
| Psp6I | CCWGG | 1 cut(s) | 230 |
| PspGI | CCWGG | 1 cut(s) | 230 |
| PspN4I | GGNNCC | 4 cut(s) | 363, 595, 762, 984 |
| PspPI | GGNCC | 2 cut(s) | 362, 761 |
| PstI | CTGCAG | 2 cut(s) | 535, 1008 |
| PsuI | RGATCY | 2 cut(s) | 893, 958 |
| PvuII | CAGCTG | 2 cut(s) | 1003, 1066 |
| RsaI | GTAC | 3 cut(s) | 428, 508, 1078 |
| RsaNI | GTAC | 3 cut(s) | 427, 507, 1077 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1240 |
| SacI | GAGCTC | 1 cut(s) | 741 |
| SaqAI | TTAA | 3 cut(s) | 393, 575, 1026 |
| SatI | GCNGC | 8 cut(s) | 97, 356, 480, 531, 902, 1001, 1004, 1216 |
| Sau3AI | GATC | 5 cut(s) | 370, 378, 893, 958, 1140 |
| Sau96I | GGNCC | 2 cut(s) | 362, 761 |
| SchI | GAGTC | 1 cut(s) | 304 |
| ScrFI | CCNGG | 2 cut(s) | 232, 360 |
| SduI | GDGCHC | 2 cut(s) | 741, 920 |
| SfaNI | GCATC | 1 cut(s) | 789 |
| SfcI | CTRYAG | 3 cut(s) | 531, 712, 1004 |
| Sfr274I | CTCGAG | 1 cut(s) | 546 |
| SinI | GGWCC | 2 cut(s) | 362, 761 |
| SlaI | CTCGAG | 1 cut(s) | 546 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1240 |
| SmlI | CTYRAG | 3 cut(s) | 350, 546, 1210 |
| SmoI | CTYRAG | 3 cut(s) | 350, 546, 1210 |
| SphI | GCATGC | 1 cut(s) | 1239 |
| Sse9I | AATT | 9 cut(s) | 539, 556, 572, 583, 649, 792, 1021, 1057, 1130 |
| SsiI | CCGC | 2 cut(s) | 97, 444 |
| SspMI | CTAG | 2 cut(s) | 921, 987 |
| SstI | GAGCTC | 1 cut(s) | 741 |
| StyD4I | CCNGG | 2 cut(s) | 230, 358 |
| StyI | CCWWGG | 4 cut(s) | 430, 525, 692, 764 |
| TaaI | ACNGT | 6 cut(s) | 426, 607, 617, 685, 727, 1042 |
| TaiI | ACGT | 4 cut(s) | 18, 134, 419, 567 |
| TaqI | TCGA | 4 cut(s) | 33, 213, 547, 664 |
| TasI | AATT | 9 cut(s) | 539, 556, 572, 583, 649, 792, 1021, 1057, 1130 |
| TatI | WGTACW | 1 cut(s) | 506 |
| TauI | GCSGC | 1 cut(s) | 99 |
| TfiI | GAWTC | 1 cut(s) | 673 |
| Tru1I | TTAA | 3 cut(s) | 393, 575, 1026 |
| Tru9I | TTAA | 3 cut(s) | 393, 575, 1026 |
| TscAI | CASTG | 2 cut(s) | 782, 1013 |
| TseI | GCWGC | 7 cut(s) | 355, 479, 530, 901, 1000, 1003, 1215 |
| TspDTI | ATGAA | 2 cut(s) | 552, 686 |
| TspGWI | ACGGA | 1 cut(s) | 950 |
| TspRI | CASTG | 2 cut(s) | 782, 1013 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1069 |
| VpaK11BI | GGWCC | 2 cut(s) | 362, 761 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 627 |
| XapI | RAATTY | 3 cut(s) | 539, 1021, 1057 |
| XceI | RCATGY | 2 cut(s) | 884, 1239 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 937 |
| XhoI | CTCGAG | 1 cut(s) | 546 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1058 |
| XspI | CTAG | 2 cut(s) | 921, 987 |
| Zsp2I | ATGCAT | 1 cut(s) | 882 |