Rorug06G0302800

28 kDa heat- and acid-stable phosphoprotein-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0008298
Physical Location & Seq
Reverse (-)
45415486 .. 45420669
5184 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0302800.1

Sequence Viewer

Length: 2385 bp
ATGGCTCAAGCCACTTGCTTTAAGCACAGGAATAGAGGAGGTGAGATGGACACAGCATCTATAAAATGTCTAATCAATAGCATATCTCGATTGGTTCTTCTAGTTTCATGCCAAACAGTAAAGTCTGTGCCTATTCAGAAGGTTTACAGAACCATAGCTGATGTATTGAAGCTTTTGAAGCCGCTGCTTGATGAAGTAGTTGATTACAATATACCTTCAGATGACATTCTATTTCAAGAGTGTGAAGAATTGGATATGGCTGTCAATGAAGCTAGGGAATTCATGGAAAACTGGTCTCCAAAGTCAAGCAAACTATTAAGTGCTTTGCGGAGTGAGCCATTGTTGATAAAGATACAAAATTCATCACTCAAGATTTGCTGTACATTAAGTAGATTATTACAGTCATCTTCATCTGCTTCAGGTTTAATGGGTCTACAGCAATGTATGCAGGAAATTGAACGTTTGAAGCCTGAAAGAGTAACAGAATACTTAGAAGAGGCTCTGAAAAGTCAAACAAAAGATTTCATGCCTTCCATCAAATATCTTATGAAAATTACTGAATTGCTTAGCTTGACTTCCAGCCAAGAACTGTTGAAAGAAAGTATTGCTGTAGAGAAGGAAAGAATTACTGTTGAAGTTCGTGATGTTAGAGGGGAACTAGATCAAATCAACCAAATTGTGATTCTTGTCTCTCATATTCGCGAATTCATGGTTAAAAGTGACCGCATTACCGCATCTGGCATCCCGGTCCCTCCATACTTCCGCTGCCCTTTGTCTTCAGAACTCATTTTGGATCCGGTGATTGTAGCTTCGGGTCAAACATATGAGAGAACTGCCATACAAAAATGGCTTGATCATGGGTTGATTATCTGCCCAATGACCCGTCAGAGGCTGACACATACAAACCTCATTCCCAATTACTCATTCAAAGTTATGGTAGAAAGTTGGTGTCAAGAAAATAATATTAAACTTGTGACGAACTCTGACTGCACTAATGCTATCACTGTCCCATCTCCATTAGGTCACATCTCTCCTGAAGGTTTAATTCACACAGATACCCAGTACTCCATCCACAGTAGCAATTCGACATCAAGATCCTCTGCCGAAGTTGAGAAGCAAAGAAAAGATGTATCTCCTAGATTGAGTGGAGAAAAGTCCAATGGACGCCCTAGTGGTGAGAAAGACCAGTCATCACCAAAACAGTCATATATTCATAGCAGGAGTGAATCAGCCTCAAGTACTGTTTCCAGTGTTGATTATATGCCTCCAGCATCTATTAAGGTGTCAGGGATATCCAATAAGCATGAAAAGGATAATGAGTTTTCTGGAGAAATTACATCTGAGCATCCTGTTGCTTATATTCCAAATAAAGAATCAGGAATTTCCCCTGGGCTATCAGGAAAGAAGTCTCACCTTTCCAAAGCAAATGTAGAACTGGCGTCATGGCATGACAGCCCTAACTACCCAAACAAACAGCTGCTTCCATTTTCTAGCTCAGAATCTGATGGGTCGACGACAGCATCCCATGTCATGAAATTAGTTGAAGACCTCAAGAGCCAATTGGATGAAGTGCAAACCAGGGCTGCGGAAGAATTGCGGCTTCTTGCAAAGCACAATATGGATAATCGCATTATTATAGGCCAATGTGGTGCTATCACACCCTTGCTTTCGCTGCTATATTCAGAGATGAAGTTAACGCAAGAGCATGCTGTGACAGCTCTTTTGAATTTATCAATTAATGAAGACAATAAGGCCATGATTGCAGAAGCAGGAGCAATTGAACCGCTCATCCATGTTCTGAAAACTGGGAATGATGGTGCCAAAGAAAATTCAGCTGCAGCTTTATTCAGCCTCTCTGTCTTAGATGAATACAAGGCAAAAATTGGCCGTTCTGGTGCAGTGAAGGCCTTGGTTGATCTTCTAGGCTCCGGGACTCTTAGAGGGAAGAAAGATGCTGCTACTGCACTGTTTAATCTCTCAATTTTTCATGAAAATAAGGCTCGCCTAGTTCAAGCTGGGGCAGTGAAGTATCTTATTGAGTTGATGGACCCTGACACAGGGATGGCTGACAAGGCTGTTGCTCTTCTGGCAAATTTGTCCACCATTGCAGACGGGCGCTTAGCAATTGCACGGGGAGGAGGAATTCCATTACTAGTTGAGGTCGTGGAATCAGGCTCTCAGAGGGGAAAGGAAAACTCTGCCTCCATTCTGTTGCAACTGTGCCTTCATAGTCCAAAGTTTTGTACTATGGTTCTTCAGGAAGGAGCTGTCCCTCCCCTGGTCGCTTTATCTCAGTCTGGCAGTCCAAGAGCAAAGGAAAAGGCACAGCAGCTTCTCAGTCACTTCCGGAATCAGAGAGAAGGGGCTATGGGGAAGGGAAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PP28

Protein Analysis

794

Amino Acids

87.02

Weight (kDa)

6.85

Isoelectric Point (pI)

43.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PUB2_N PF25240 18 - 155 1.4e-50 PUB2-like, N-terminal domain
U-box PF04564 250 - 321 5.7e-23 U-box domain
ARM_ARMC5 PF24768 508 - 682 8.6e-10 ARMC5
ARM_PUB PF25598 510 - 784 3.8e-25 Plant U-box protein ARM repeat region
Arm PF00514 541 - 578 7.2e-07 Armadillo/beta-catenin-like repeat
ARM_ARMC5 PF24768 541 - 743 5.1e-14 ARMC5
Arm PF00514 580 - 619 3.5e-06 Armadillo/beta-catenin-like repeat
Arm PF00514 623 - 660 5.8e-06 Armadillo/beta-catenin-like repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1817
AccBSI CCGCTC 1 cut(s) 1786
AccI GTMKAC 2 cut(s) 433, 1511
AccII CGCG 1 cut(s) 702
AccIII TCCGGA 1 cut(s) 2346
AciI CCGC 8 cut(s) 182, 328, 724, 732, 763, 1586, 1597, 1784
AclI AACGTT 1 cut(s) 460
AclWI GGATC 3 cut(s) 788, 801, 1089
AcoI YGGCCR 1 cut(s) 1885
AcsI RAATTY 8 cut(s) 278, 358, 704, 1380, 1726, 1828, 2092, 2142
AcuI CTGAAG 5 cut(s) 201, 402, 762, 1056, 2240
AcyI GRCGYC 2 cut(s) 1165, 1439
AfaI GTAC 4 cut(s) 382, 1064, 1240, 2245
AfiI CCNNNNNNNGG 3 cut(s) 888, 2057, 2278
AhlI ACTAGT 1 cut(s) 2152
AjnI CCWGG 3 cut(s) 1387, 1577, 2277
AjuI GAANNNNNNNTTGG 4 cut(s) 666, 698, 908, 940
AloI GAACNNNNNNTCC 2 cut(s) 1773, 1805
Alw26I GTCTC 3 cut(s) 300, 694, 1413
AlwI GGATC 3 cut(s) 788, 801, 1089
AlwNI CAGNNNCTG 2 cut(s) 892, 1502
Aor13HI TCCGGA 1 cut(s) 2346
AoxI GGCC 4 cut(s) 1639, 1752, 1885, 1905
ApeKI GCWGC 9 cut(s) 184, 765, 1477, 1583, 1672, 1835, 1838, 1955, 2329
ApoI RAATTY 8 cut(s) 278, 358, 704, 1380, 1726, 1828, 2092, 2142
ArsI GACNNNNNNTTYG 2 cut(s) 1705, 1737
AseI ATTAAT 1 cut(s) 1737
AspLEI GCGC 1 cut(s) 2118
AspS9I GGNCC 2 cut(s) 748, 2047
AsuC2I CCSGG 2 cut(s) 746, 1930
AsuHPI GGTGA 5 cut(s) 53, 811, 1185, 1187, 1403
AvaII GGWCC 2 cut(s) 748, 2047
BamHI GGATCC 1 cut(s) 793
BanI GGYRCC 1 cut(s) 1817
BbsI GAAGAC 3 cut(s) 768, 1551, 1749
BbvI GCAGC 9 cut(s) 171, 752, 1464, 1570, 1659, 1822, 1850, 1942, 2341
BccI CCATC 8 cut(s) 40, 542, 1018, 1076, 1499, 1808, 2038, 2056
BceAI ACGGC 1 cut(s) 1872
BciT130I CCWGG 3 cut(s) 1389, 1579, 2279
BclI TGATCA 1 cut(s) 853
BcnI CCSGG 2 cut(s) 746, 1930
BcoDI GTCTC 3 cut(s) 300, 694, 1413
BcuI ACTAGT 1 cut(s) 2152
BfaI CTAG 9 cut(s) 101, 273, 659, 1137, 1170, 1491, 1922, 2006, 2153
BfmI CTRYAG 3 cut(s) 434, 609, 1836
BfoI RGCGCY 1 cut(s) 2119
BlpI GCTNAGC 2 cut(s) 566, 2119
BmcAI AGTACT 2 cut(s) 1064, 1240
Bme1390I CCNGG 5 cut(s) 746, 1389, 1579, 1930, 2279
Bme18I GGWCC 2 cut(s) 748, 2047
BmgT120I GGNCC 2 cut(s) 748, 2047
BmiI GGNNCC 5 cut(s) 750, 795, 1819, 1927, 2049
BmrFI CCNGG 5 cut(s) 746, 1389, 1579, 1930, 2279
BmrI ACTGGG 2 cut(s) 1054, 1815
BmsI GCATC 7 cut(s) 65, 743, 750, 1280, 1354, 1529, 1942
BmuI ACTGGG 2 cut(s) 1054, 1815
BpiI GAAGAC 3 cut(s) 768, 1551, 1749
BpmI CTGGAG 2 cut(s) 1251, 1347
Bpu1102I GCTNAGC 2 cut(s) 566, 2119
BpuEI CTTGAG 3 cut(s) 353, 1219, 1535
BpuMI CCSGG 2 cut(s) 746, 1930
BsaHI GRCGYC 2 cut(s) 1165, 1439
BsaI GGTCTC 1 cut(s) 300
BsaJI CCNNGG 5 cut(s) 1387, 1388, 1578, 1908, 2277
BsaWI WCCGGW 2 cut(s) 796, 2346
BsaXI ACNNNNNCTCC 2 cut(s) 2186, 2216
Bsc4I CCNNNNNNNGG 3 cut(s) 888, 2057, 2278
Bse1I ACTGG 6 cut(s) 296, 1060, 1186, 1248, 1440, 1810
Bse3DI GCAATG 2 cut(s) 446, 2103
BseAI TCCGGA 1 cut(s) 2346
BseBI CCWGG 3 cut(s) 1389, 1579, 2279
BseDI CCNNGG 5 cut(s) 1387, 1388, 1578, 1908, 2277
BseGI GGATG 7 cut(s) 741, 1068, 1345, 1520, 1570, 1788, 2067
BseLI CCNNNNNNNGG 3 cut(s) 888, 2057, 2278
BseMI GCAATG 2 cut(s) 446, 2103
BseMII CTCAG 5 cut(s) 1332, 1509, 2192, 2306, 2350
BseNI ACTGG 6 cut(s) 296, 1060, 1186, 1248, 1440, 1810
BseRI GAGGAG 2 cut(s) 51, 2151
BseXI GCAGC 9 cut(s) 171, 752, 1464, 1570, 1659, 1822, 1850, 1942, 2341
BseYI CCCAGC 1 cut(s) 2015
BsgI GTGCAG 3 cut(s) 973, 1917, 1947
Bsh1236I CGCG 1 cut(s) 702
BshFI GGCC 4 cut(s) 1641, 1754, 1887, 1907
BshNI GGYRCC 1 cut(s) 1817
BsiSI CCGG 4 cut(s) 746, 797, 1929, 2347
BslFI GGGAC 4 cut(s) 734, 992, 1945, 2255
BslI CCNNNNNNNGG 3 cut(s) 888, 2057, 2278
BsmAI GTCTC 3 cut(s) 300, 694, 1413
BsmFI GGGAC 4 cut(s) 734, 992, 1945, 2255
BsnI GGCC 4 cut(s) 1641, 1754, 1887, 1907
Bso31I GGTCTC 1 cut(s) 300
Bsp13I TCCGGA 1 cut(s) 2346
Bsp1407I TGTACA 1 cut(s) 380
Bsp143I GATC 5 cut(s) 661, 793, 853, 1094, 1915
Bsp1720I GCTNAGC 2 cut(s) 566, 2119
Bsp68I TCGCGA 1 cut(s) 702
BspACI CCGC 8 cut(s) 182, 328, 724, 732, 763, 1586, 1597, 1784
BspANI GGCC 4 cut(s) 1641, 1754, 1887, 1907
BspCNI CTCAG 5 cut(s) 1333, 1508, 2191, 2305, 2349
BspEI TCCGGA 1 cut(s) 2346
BspFNI CGCG 1 cut(s) 702
BspHI TCATGA 2 cut(s) 1530, 1987
BspLI GGNNCC 5 cut(s) 750, 795, 1819, 1927, 2049
BspMAI CTGCAG 1 cut(s) 1840
BspPI GGATC 3 cut(s) 788, 801, 1089
BspQI GCTCTTC 1 cut(s) 2088
BspT107I GGYRCC 1 cut(s) 1817
BspTNI GGTCTC 1 cut(s) 300
BsrBI CCGCTC 1 cut(s) 1786
BsrDI GCAATG 2 cut(s) 446, 2103
BsrGI TGTACA 1 cut(s) 380
BsrI ACTGG 6 cut(s) 296, 1060, 1186, 1248, 1440, 1810
BssECI CCNNGG 5 cut(s) 1387, 1388, 1578, 1908, 2277
BssMI GATC 5 cut(s) 661, 793, 853, 1094, 1915
BssNI GRCGYC 2 cut(s) 1165, 1439
BssT1I CCWWGG 1 cut(s) 1908
Bst2UI CCWGG 3 cut(s) 1389, 1579, 2279
Bst6I CTCTTC 2 cut(s) 489, 2088
BstACI GRCGYC 2 cut(s) 1165, 1439
BstAPI GCANNNNNTGC 1 cut(s) 445
BstAUI TGTACA 1 cut(s) 380
BstC8I GCNNGC 2 cut(s) 1707, 2002
BstENI CCTNNNNNAGG 1 cut(s) 2055
BstF5I GGATG 7 cut(s) 741, 1068, 1345, 1520, 1570, 1788, 2067
BstFNI CGCG 1 cut(s) 702
BstH2I RGCGCY 1 cut(s) 2119
BstHHI GCGC 1 cut(s) 2118
BstKTI GATC 5 cut(s) 664, 796, 856, 1097, 1918
BstMAI GTCTC 3 cut(s) 300, 694, 1413
BstMBI GATC 5 cut(s) 661, 793, 853, 1094, 1915
BstNI CCWGG 3 cut(s) 1389, 1579, 2279
BstNSI RCATGY 1 cut(s) 1709
BstSCI CCNGG 5 cut(s) 744, 1387, 1577, 1928, 2277
BstSFI CTRYAG 3 cut(s) 434, 609, 1836
BstUI CGCG 1 cut(s) 702
BstV1I GCAGC 9 cut(s) 171, 752, 1464, 1570, 1659, 1822, 1850, 1942, 2341
BstV2I GAAGAC 3 cut(s) 768, 1551, 1749
BstX2I RGATCY 2 cut(s) 793, 1094
BstYI RGATCY 2 cut(s) 793, 1094
BsuRI GGCC 4 cut(s) 1641, 1754, 1887, 1907
BtsCI GGATG 7 cut(s) 741, 1068, 1345, 1520, 1570, 1788, 2067
BtsI GCAGTG 2 cut(s) 1905, 2028
BtsIMutI CAGTG 5 cut(s) 1002, 1255, 1905, 1964, 2028
BtuMI TCGCGA 1 cut(s) 702
Cac8I GCNNGC 2 cut(s) 1707, 2002
CaiI CAGNNNCTG 2 cut(s) 892, 1502
CciI TCATGA 2 cut(s) 1530, 1987
CfoI GCGC 1 cut(s) 2118
Cfr13I GGNCC 2 cut(s) 748, 2047
CseI GACGC 2 cut(s) 1173, 1428
Csp6I GTAC 4 cut(s) 381, 1063, 1239, 2244
CviQI GTAC 4 cut(s) 381, 1063, 1239, 2244
DpnI GATC 5 cut(s) 663, 795, 855, 1096, 1917
DpnII GATC 5 cut(s) 661, 793, 853, 1094, 1915
EaeI YGGCCR 1 cut(s) 1885
Eam1104I CTCTTC 2 cut(s) 489, 2088
EarI CTCTTC 2 cut(s) 489, 2088
Eco130I CCWWGG 1 cut(s) 1908
Eco147I AGGCCT 1 cut(s) 1907
Eco31I GGTCTC 1 cut(s) 300
Eco32I GATATC 1 cut(s) 1293
Eco47I GGWCC 2 cut(s) 748, 2047
Eco57I CTGAAG 5 cut(s) 201, 402, 762, 1056, 2240
EcoNI CCTNNNNNAGG 1 cut(s) 2055
EcoRI GAATTC 3 cut(s) 278, 704, 2142
EcoRII CCWGG 3 cut(s) 1387, 1577, 2277
EcoRV GATATC 1 cut(s) 1293
EcoT14I CCWWGG 1 cut(s) 1908
ErhI CCWWGG 1 cut(s) 1908
FaqI GGGAC 4 cut(s) 734, 992, 1945, 2255
FauNDI CATATG 1 cut(s) 823
FbaI TGATCA 1 cut(s) 853
FblI GTMKAC 2 cut(s) 433, 1511
FokI GGATG 7 cut(s) 728, 1055, 1332, 1507, 1577, 1775, 2074
FspBI CTAG 9 cut(s) 101, 273, 659, 1137, 1170, 1491, 1922, 2006, 2153
GlaI GCGC 1 cut(s) 2117
GsaI CCCAGC 1 cut(s) 2019
GsuI CTGGAG 2 cut(s) 1251, 1347
HaeII RGCGCY 1 cut(s) 2119
HaeIII GGCC 4 cut(s) 1641, 1754, 1887, 1907
HapII CCGG 4 cut(s) 746, 797, 1929, 2347
HgaI GACGC 2 cut(s) 1173, 1428
HhaI GCGC 1 cut(s) 2118
Hin1I GRCGYC 2 cut(s) 1165, 1439
Hin6I GCGC 1 cut(s) 2116
HinP1I GCGC 1 cut(s) 2116
HincII GTYRAC 2 cut(s) 1512, 1695
HindII GTYRAC 2 cut(s) 1512, 1695
HindIII AAGCTT 1 cut(s) 170
HinfI GANTC 7 cut(s) 682, 1226, 1373, 1499, 1933, 2168, 2350
HpaI GTTAAC 1 cut(s) 1695
HpaII CCGG 4 cut(s) 746, 797, 1929, 2347
HphI GGTGA 5 cut(s) 53, 811, 1185, 1187, 1403
Hpy166II GTNNAC 5 cut(s) 145, 434, 1512, 1695, 2100
Hpy8I GTNNAC 5 cut(s) 145, 434, 1512, 1695, 2100
Hpy99I CGWCG 1 cut(s) 1516
HpyCH4IV ACGT 1 cut(s) 460
HpySE526I ACGT 1 cut(s) 460
Hsp92I GRCGYC 2 cut(s) 1165, 1439
HspAI GCGC 1 cut(s) 2116
Kpn2I TCCGGA 1 cut(s) 2346
Ksp22I TGATCA 1 cut(s) 853
KspAI GTTAAC 1 cut(s) 1695
Kzo9I GATC 5 cut(s) 661, 793, 853, 1094, 1915
LguI GCTCTTC 1 cut(s) 2088
LmnI GCTCC 3 cut(s) 1772, 1931, 2264
Lsp1109I GCAGC 9 cut(s) 171, 752, 1464, 1570, 1659, 1822, 1850, 1942, 2341
LweI GCATC 7 cut(s) 65, 743, 750, 1280, 1354, 1529, 1942
MaeI CTAG 9 cut(s) 101, 273, 659, 1137, 1170, 1491, 1922, 2006, 2153
MaeII ACGT 1 cut(s) 460
MaeIII GTNAC 6 cut(s) 478, 719, 973, 1022, 1711, 2339
MalI GATC 5 cut(s) 663, 795, 855, 1096, 1917
MbiI CCGCTC 1 cut(s) 1786
MboI GATC 5 cut(s) 661, 793, 853, 1094, 1915
MfeI CAATTG 3 cut(s) 1559, 1776, 2124
MflI RGATCY 2 cut(s) 793, 1094
MlyI GAGTC 1 cut(s) 1927
MroI TCCGGA 1 cut(s) 2346
MslI CAYNNNNRTG 1 cut(s) 2060
MspA1I CMGCKG 4 cut(s) 184, 765, 1477, 1835
MspI CCGG 4 cut(s) 746, 797, 1929, 2347
MspR9I CCNGG 5 cut(s) 746, 1389, 1579, 1930, 2279
MunI CAATTG 3 cut(s) 1559, 1776, 2124
MvaI CCWGG 3 cut(s) 1389, 1579, 2279
MvnI CGCG 1 cut(s) 702
NciI CCSGG 2 cut(s) 746, 1930
NdeI CATATG 1 cut(s) 823
NdeII GATC 5 cut(s) 661, 793, 853, 1094, 1915
NlaIV GGNNCC 5 cut(s) 750, 795, 1819, 1927, 2049
NmuCI GTSAC 5 cut(s) 719, 973, 1022, 1711, 2339
NruI TCGCGA 1 cut(s) 702
NspI RCATGY 1 cut(s) 1709
PaeI GCATGC 1 cut(s) 1709
PagI TCATGA 2 cut(s) 1530, 1987
PasI CCCWGGG 1 cut(s) 1388
PceI AGGCCT 1 cut(s) 1907
PciSI GCTCTTC 1 cut(s) 2088
PfeI GAWTC 6 cut(s) 682, 1226, 1373, 1499, 2168, 2350
PfoI TCCNGGA 1 cut(s) 1928
PleI GAGTC 1 cut(s) 1927
PpsI GAGTC 1 cut(s) 1927
PshBI ATTAAT 1 cut(s) 1737
Psp1406I AACGTT 1 cut(s) 460
Psp6I CCWGG 3 cut(s) 1387, 1577, 2277
PspFI CCCAGC 1 cut(s) 2015
PspGI CCWGG 3 cut(s) 1387, 1577, 2277
PspN4I GGNNCC 5 cut(s) 750, 795, 1819, 1927, 2049
PspPI GGNCC 2 cut(s) 748, 2047
PstI CTGCAG 1 cut(s) 1840
PstNI CAGNNNCTG 2 cut(s) 892, 1502
PsuI RGATCY 2 cut(s) 793, 1094
PvuII CAGCTG 2 cut(s) 1477, 1835
RruI TCGCGA 1 cut(s) 702
RsaI GTAC 4 cut(s) 382, 1064, 1240, 2245
RsaNI GTAC 4 cut(s) 381, 1063, 1239, 2244
RseI CAYNNNNRTG 1 cut(s) 2060
SalI GTCGAC 1 cut(s) 1510
SapI GCTCTTC 1 cut(s) 2088
Sau3AI GATC 5 cut(s) 661, 793, 853, 1094, 1915
Sau96I GGNCC 2 cut(s) 748, 2047
ScaI AGTACT 2 cut(s) 1064, 1240
SchI GAGTC 1 cut(s) 1927
ScrFI CCNGG 5 cut(s) 746, 1389, 1579, 1930, 2279
SfaNI GCATC 7 cut(s) 65, 743, 750, 1280, 1354, 1529, 1942
SfcI CTRYAG 3 cut(s) 434, 609, 1836
SinI GGWCC 2 cut(s) 748, 2047
SmiMI CAYNNNNRTG 1 cut(s) 2060
SmlI CTYRAG 4 cut(s) 6, 368, 1234, 1550
SmoI CTYRAG 4 cut(s) 6, 368, 1234, 1550
SpeI ACTAGT 1 cut(s) 2152
SphI GCATGC 1 cut(s) 1709
SseBI AGGCCT 1 cut(s) 1907
SsiI CCGC 8 cut(s) 182, 328, 724, 732, 763, 1586, 1597, 1784
SspI AATATT 1 cut(s) 964
SspMI CTAG 9 cut(s) 101, 273, 659, 1137, 1170, 1491, 1922, 2006, 2153
StuI AGGCCT 1 cut(s) 1907
StyD4I CCNGG 5 cut(s) 744, 1387, 1577, 1928, 2277
StyI CCWWGG 1 cut(s) 1908
TaiI ACGT 1 cut(s) 463
TaqI TCGA 3 cut(s) 88, 1085, 1511
TatI WGTACW 4 cut(s) 380, 1062, 1238, 2243
TauI GCSGC 2 cut(s) 184, 1600
TfiI GAWTC 6 cut(s) 682, 1226, 1373, 1499, 2168, 2350
TscAI CASTG 5 cut(s) 1009, 1255, 1905, 1971, 2028
TseFI GTSAC 5 cut(s) 719, 973, 1022, 1711, 2339
TseI GCWGC 9 cut(s) 184, 765, 1477, 1583, 1672, 1835, 1838, 1955, 2329
Tsp45I GTSAC 5 cut(s) 719, 973, 1022, 1711, 2339
TspRI CASTG 5 cut(s) 1009, 1255, 1905, 1971, 2028
VpaK11BI GGWCC 2 cut(s) 748, 2047
VspI ATTAAT 1 cut(s) 1737
XagI CCTNNNNNAGG 1 cut(s) 2055
XapI RAATTY 8 cut(s) 278, 358, 704, 1380, 1726, 1828, 2092, 2142
XceI RCATGY 1 cut(s) 1709
XmiI GTMKAC 2 cut(s) 433, 1511
XspI CTAG 9 cut(s) 101, 273, 659, 1137, 1170, 1491, 1922, 2006, 2153
ZrmI AGTACT 2 cut(s) 1064, 1240
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.