Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0006329

Physical Location & Seq

Genomic Coordinates Reverse (-)

12042400 .. 12045845

Gene Structure 3446 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom08g13320.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2106 bp

ATGTTGCCATCTGGAACTCGCTGTGCTGACCCTGCTTTACCTTTCATTAGATTGTTTTCTTTTCCTCTCCATCCTTCACAAATGGACATTGTGAAGCGCAATCCAGCAAGAGAAGACTGGTGGGCAGGAGCTGCTAATACTGGCCCTTTTATTTATACACCATTCAGCAAGGGAGATACAAACAGTAATGCCAAACAGGACCTGGTTTGGATTGTTGGAGAACCAGTGCAGGTTTTGGTTGAACTGGCAAACCCATGCGGCTTTGAATTGAGGGTTGATAGCATATATCTCTCAGTGCCTTCAGGAAATTTTGATGCTTTTCCTGTTACTGTAAATCTTCCACCCAATTCATCAAAAGTGATCACCTTATCTGGATCGATCCCAACTGCAGTTGGGCAAGTGACAATTCCTGGGTGCACTGTCCACTGCTTTGGTGTTATTACGGAAAACCTGTTCAAGGATGTCGACAATCTGCTTCTTGGAGCTACACAAGGACTTGTGCTTTCTGACCCTTTCAGATGCTGTGGGTCTGCGAGGTTGAAAAATATATCTGTTCCAAACATTTCTGTGGTACCGCCATTACCATTGTTGATTTCACGTGTAGTCAGTGGTGATGGTGCAATCATTCTTCACGAAGGTGAAATTCGTGATGTATGGATCAGTCTGGCTAATGCAGGTATAGTTCCAGTTGAGCAAGCTCATGTATCACTATCAGGAGAAAACCAAAATTCTGTTATCTCGATTGCATCTGAAACCTTAAGATCAGCCCTTCCCTTGAGACCTGGTGCGGAAGTGACTATACCTGTGACCTTAAAAGCTTGGCGGCATGTTGTACCAGATCCTGAGACTGCTGGAGGCAGGAGTGCCTCTGGAAGCACTGTGAGGCAGTCTAAGGATGGAAGTAACCCCACATTGTTAATCCATTATGCAGGGCCTCTGATAAATACTGGAGATCCTCCAACATATAAATCTGCTATCCCCCCTGGCAGGCGCCTTGTTGTTCCTTTGCAGATTTGTGTTCTACAGGGTTTGTCTTTTGTAAAGGCTCGTCTGCTCTCAATGGAGATTCCTGCACAAGTGGGTGTAAACCTTTCAAAACCAGTTCATAGGGAGAATAGCCCTACTGAAGCTCTTGGATCTCCAACTAAGATGGACAGATTGGTGAAGATTGATCCTCTCAGAAGTAATTGGGGACTACGATTTCTTGAACTTGAGTTGTCTAATCCCACGGATGTTGTCTTTGAAATTACTGTTTCTGTCCAGCTGGAGAACCCTAGGCATGAGCATGTACTCTCTGGTGACCAAGATGCTACTGAATATGGTTTGCCTAAAACAAGAATTGATCGGGATTGTTCTGCAAGGGTACTGATACCACTGGAGCATTTGAAATTACCAGTTCTTGATGATTTGTTTTTTGTGACGGATAATCTGGCAGATGGGGTTTTTAGTGGCAAAAATACAAGATTCTCGGAACAGAATACTAAAACTGAACTTAACGCTTCTATCAAGAACCTCATATCTAAGATAAAGGTTAGGTGGCAATCAGGGCGAAACAGCTCTGGGGAATTGAATATCAAGGATGCTATACAAGCAGCCCTTCAGACATCTGTTATGGATCTACTGCTGACAGATCCGTTGACATTTTGCTTCAGCCTTTCTAGAAATGGCCGTGTACCTGAAACTTCTGTTTCACACACAGAGCCCAATTTTCATGGTCACCCTTTTGCATCTAAGGGTTCTGTGCTGGCGCATGAAATGACTGCAATGGAAGTTATGGTTCGTAATAACACAAAGGAGATGATCAAAATGAGTCTTAGCATTACATGCAGAGATGTTGCTGGAGAGAATTGCGTAGAGTGTACAAAGGCAACTGTCTTGTGTTCTGGTGTTTTGAGCGGGATCACTGTGGAGGTTCCTCCACTTCGAGAAATTAAACATTCTCTCTCTTTGTATTTTCTTGTCCCGGGTGAGTACACGCTGGTAGCTGCCGCAGTGATCGATGATGCTAATGATATCCTCAGGGCTCGTGCAAGAACAAAATCATCCGATGAGCCAATTTTCTGCCGTGGACCCCCATATCATGTTCGTGTTGTTGGGACTTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000278 GO:0000281 GO:0000910 GO:0000911 GO:0000919 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005769 GO:0005794 GO:0005802 GO:0007049 GO:0008150 GO:0009987 GO:0012505 GO:0016043 GO:0022402 GO:0022607 GO:0031410 GO:0031982 GO:0031984 GO:0032506 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044085 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0051301 GO:0061640 GO:0071840 GO:0097708 GO:0098791 GO:1902410 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TRAPPC9-Trs120

Protein Analysis

702

Amino Acids

75.98

Weight (kDa)

6.37

Isoelectric Point (pI)

36.45

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006329)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G11040
fragaria_vesca	FvH4_2g28290 FvH4_2g28290 FvH4_2g28290 FvH4_2g28290 FvH4_2g28290 FvH4_2g28290 FvH4_2g28290
malus_domestica	MD15G1131100.v1.1
prunus_persica	Prupe.1G486400_v2.0.a1 Prupe.1G486400_v2.0.a1 Prupe.1G486400_v2.0.a1 Prupe.1G486400_v2.0.a1
pyrus_communis	pycom08g13320 pycom15g11820
rosa_chinensis	RchiOBHm_Chr6g0297201
rosa_laevigata	RLG00000011622
rosa_multiflora	Rmu_sc0001574.1_g000007
rosa_roxburghii	Rroxscaffold_7G00170790
rosa_rugosa	Rorug06G0269800 Rorug06G0269900 Rorug06G0269900
rosa_samantha	Rh6AG380900 Rh6BG389000 Rh6CG394300 Rh6DG380900
rosa_wichuraiana	Rw6G033170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	220, 665
Acc65I	GGTACC	1 cut(s)	571
AccB1I	GGYRCC	2 cut(s)	571, 990
AccBSI	CCGCTC	1 cut(s)	1896
AccI	GTMKAC	1 cut(s)	465
AciI	CCGC	6 cut(s)	258, 575, 788, 823, 1896, 1989
AcoI	YGGCCR	1 cut(s)	1666
AcsI	RAATTY	3 cut(s)	307, 642, 727
AcuI	CTGAAG	4 cut(s)	285, 1146, 1583, 1633
AcvI	CACGTG	1 cut(s)	599
AcyI	GRCGYC	1 cut(s)	991
AfaI	GTAC	7 cut(s)	573, 834, 1290, 1365, 1674, 1861, 1973
AfiI	CCNNNNNNNGG	2 cut(s)	457, 987
AflII	CTTAAG	1 cut(s)	757
AflIII	ACRYGT	1 cut(s)	598
AgsI	TTSAA	9 cut(s)	242, 266, 457, 541, 1095, 1208, 1244, 1387, 1570
AjnI	CCWGG	4 cut(s)	201, 409, 781, 982
AleI	CACNNNNGTG	1 cut(s)	636
AloI	GAACNNNNNNTCC	2 cut(s)	437, 469
AluBI	AGCT	8 cut(s)	131, 485, 698, 818, 1130, 1264, 1557, 1985
AluI	AGCT	8 cut(s)	131, 485, 698, 818, 1130, 1264, 1557, 1985
Alw21I	GWGCWC	1 cut(s)	419
Alw26I	GTCTC	2 cut(s)	772, 839
Alw44I	GTGCAC	1 cut(s)	415
AlwNI	CAGNNNCTG	4 cut(s)	131, 202, 522, 842
Ama87I	CYCGRG	1 cut(s)	1963
AoxI	GGCC	3 cut(s)	142, 932, 1666
ApaLI	GTGCAC	1 cut(s)	415
ApeKI	GCWGC	3 cut(s)	131, 1592, 1985
ApoI	RAATTY	3 cut(s)	307, 642, 727
Asp718I	GGTACC	1 cut(s)	571
AspA2I	CCTAGG	1 cut(s)	1274
AspLEI	GCGC	3 cut(s)	99, 993, 1750
AspS9I	GGNCC	4 cut(s)	143, 199, 932, 2069
AsuC2I	CCSGG	2 cut(s)	1964, 1965
AsuHPI	GGTGA	7 cut(s)	355, 623, 650, 1174, 1310, 1709, 1979
AvaI	CYCGRG	1 cut(s)	1963
AvaII	GGWCC	2 cut(s)	199, 2069
AvrII	CCTAGG	1 cut(s)	1274
AxyI	CCTNAGG	1 cut(s)	2018
BaeGI	GKGCMC	1 cut(s)	419
BanI	GGYRCC	2 cut(s)	571, 990
BanII	GRGCYC	2 cut(s)	1704, 2026
BarI	GAAGNNNNNNTAC	2 cut(s)	783, 815
BauI	CACGAG	1 cut(s)	2025
BbrPI	CACGTG	1 cut(s)	599
BbsI	GAAGAC	1 cut(s)	120
Bbv12I	GWGCWC	1 cut(s)	419
BbvI	GCAGC	3 cut(s)	118, 1604, 1972
BccI	CCATC	6 cut(s)	16, 78, 608, 890, 1144, 1430
BceAI	ACGGC	2 cut(s)	1653, 2049
BciT130I	CCWGG	4 cut(s)	203, 411, 783, 984
BclI	TGATCA	2 cut(s)	360, 1800
BcnI	CCSGG	2 cut(s)	1964, 1965
BcoDI	GTCTC	2 cut(s)	772, 839
BfaI	CTAG	2 cut(s)	1275, 1659
BfmI	CTRYAG	2 cut(s)	387, 1022
BfoI	RGCGCY	1 cut(s)	994
BfrI	CTTAAG	1 cut(s)	757
BfuAI	ACCTGC	2 cut(s)	220, 665
BisI	GCNGC	6 cut(s)	132, 259, 824, 1593, 1986, 1989
BlnI	CCTAGG	1 cut(s)	1274
BlsI	GCNGC	6 cut(s)	133, 260, 825, 1594, 1987, 1990
Bme1390I	CCNGG	6 cut(s)	203, 411, 783, 984, 1964, 1965
Bme18I	GGWCC	2 cut(s)	199, 2069
BmeT110I	CYCGRG	1 cut(s)	1963
BmgT120I	GGNCC	4 cut(s)	143, 199, 932, 2069
BmiI	GGNNCC	4 cut(s)	573, 992, 1914, 2071
BmrFI	CCNGG	6 cut(s)	203, 411, 783, 984, 1964, 1965
BmsI	GCATC	7 cut(s)	304, 509, 755, 1297, 1570, 1736, 1993
BpiI	GAAGAC	1 cut(s)	120
BpmI	CTGGAG	5 cut(s)	873, 969, 1286, 1397, 1860
BpuEI	CTTGAG	2 cut(s)	796, 1232
BpuMI	CCSGG	2 cut(s)	1964, 1965
Bsa29I	ATCGAT	2 cut(s)	377, 1998
BsaAI	YACGTR	1 cut(s)	599
BsaHI	GRCGYC	1 cut(s)	991
BsaI	GGTCTC	1 cut(s)	772
BsaJI	CCNNGG	6 cut(s)	410, 982, 1227, 1274, 1963, 2065
BsaXI	ACNNNNNCTCC	2 cut(s)	210, 240
Bsc4I	CCNNNNNNNGG	2 cut(s)	457, 987
Bse1I	ACTGG	9 cut(s)	122, 145, 224, 249, 686, 952, 1100, 1380, 1394
Bse21I	CCTNAGG	1 cut(s)	2018
Bse3DI	GCAATG	1 cut(s)	1770
BseBI	CCWGG	4 cut(s)	203, 411, 783, 984
BseCI	ATCGAT	2 cut(s)	377, 1998
BseDI	CCNNGG	6 cut(s)	410, 982, 1227, 1274, 1963, 2065
BseGI	GGATG	6 cut(s)	70, 466, 901, 1237, 1585, 2042
BseLI	CCNNNNNNNGG	2 cut(s)	457, 987
BseMI	GCAATG	1 cut(s)	1770
BseMII	CTCAG	4 cut(s)	306, 834, 1192, 2032
BseNI	ACTGG	9 cut(s)	122, 145, 224, 249, 686, 952, 1100, 1380, 1394
BseSI	GKGCMC	1 cut(s)	419
BseXI	GCAGC	3 cut(s)	118, 1604, 1972
BsgI	GTGCAG	2 cut(s)	248, 1056
BshFI	GGCC	3 cut(s)	144, 934, 1668
BshNI	GGYRCC	2 cut(s)	571, 990
BshVI	ATCGAT	2 cut(s)	377, 1998
BsiHKAI	GWGCWC	1 cut(s)	419
BsiHKCI	CYCGRG	1 cut(s)	1963
BsiSI	CCGG	1 cut(s)	1964
BslFI	GGGAC	2 cut(s)	1206, 1946
BslI	CCNNNNNNNGG	2 cut(s)	457, 987
BsmAI	GTCTC	2 cut(s)	772, 839
BsmFI	GGGAC	2 cut(s)	1206, 1946
BsnI	GGCC	3 cut(s)	144, 934, 1668
Bso31I	GGTCTC	1 cut(s)	772
BsoBI	CYCGRG	1 cut(s)	1963
Bsp1286I	GDGCHC	3 cut(s)	419, 1704, 2026
Bsp1407I	TGTACA	1 cut(s)	1859
BspACI	CCGC	6 cut(s)	258, 575, 788, 823, 1896, 1989
BspANI	GGCC	3 cut(s)	144, 934, 1668
BspCNI	CTCAG	4 cut(s)	305, 835, 1191, 2031
BspDI	ATCGAT	2 cut(s)	377, 1998
BspHI	TCATGA	1 cut(s)	2102
BspLI	GGNNCC	4 cut(s)	573, 992, 1914, 2071
BspMAI	CTGCAG	1 cut(s)	391
BspMI	ACCTGC	2 cut(s)	220, 665
BspT107I	GGYRCC	2 cut(s)	571, 990
BspTI	CTTAAG	1 cut(s)	757
BspTNI	GGTCTC	1 cut(s)	772
BsrBI	CCGCTC	1 cut(s)	1896
BsrDI	GCAATG	1 cut(s)	1770
BsrGI	TGTACA	1 cut(s)	1859
BsrI	ACTGG	9 cut(s)	122, 145, 224, 249, 686, 952, 1100, 1380, 1394
BssECI	CCNNGG	6 cut(s)	410, 982, 1227, 1274, 1963, 2065
BssNI	GRCGYC	1 cut(s)	991
BssSI	CACGAG	1 cut(s)	2025
BssT1I	CCWWGG	1 cut(s)	1274
Bst2BI	CACGAG	1 cut(s)	2025
Bst2UI	CCWGG	4 cut(s)	203, 411, 783, 984
Bst4CI	ACNGT	7 cut(s)	185, 331, 421, 880, 1252, 1873, 1906
BstACI	GRCGYC	1 cut(s)	991
BstAFI	CTTAAG	1 cut(s)	757
BstAPI	GCANNNNNTGC	2 cut(s)	131, 1824
BstAUI	TGTACA	1 cut(s)	1859
BstBAI	YACGTR	1 cut(s)	599
BstC8I	GCNNGC	3 cut(s)	696, 989, 1746
BstDEI	CTNAG	9 cut(s)	292, 843, 891, 1146, 1178, 1521, 1731, 1814, 2018
BstDSI	CCRYGG	2 cut(s)	1227, 2065
BstEII	GGTNACC	2 cut(s)	1298, 1715
BstENI	CCTNNNNNAGG	1 cut(s)	455
BstF5I	GGATG	6 cut(s)	70, 466, 901, 1237, 1585, 2042
BstH2I	RGCGCY	1 cut(s)	994
BstHHI	GCGC	3 cut(s)	99, 993, 1750
BstMAI	GTCTC	2 cut(s)	772, 839
BstMWI	GCNNNNNNNGC	5 cut(s)	32, 131, 1546, 1589, 1824
BstNI	CCWGG	4 cut(s)	203, 411, 783, 984
BstNSI	RCATGY	3 cut(s)	830, 1289, 1827
BstPI	GGTNACC	2 cut(s)	1298, 1715
BstSCI	CCNGG	6 cut(s)	201, 409, 781, 982, 1962, 1963
BstSFI	CTRYAG	2 cut(s)	387, 1022
BstSLI	GKGCMC	1 cut(s)	419
BstV1I	GCAGC	3 cut(s)	118, 1604, 1972
BstV2I	GAAGAC	1 cut(s)	120
BstX2I	RGATCY	5 cut(s)	838, 952, 1136, 1615, 1630
BstXI	CCANNNNNNTGG	1 cut(s)	431
BstYI	RGATCY	5 cut(s)	838, 952, 1136, 1615, 1630
Bsu15I	ATCGAT	2 cut(s)	377, 1998
Bsu36I	CCTNAGG	1 cut(s)	2018
BsuRI	GGCC	3 cut(s)	144, 934, 1668
BsuTUI	ATCGAT	2 cut(s)	377, 1998
BtgI	CCRYGG	2 cut(s)	1227, 2065
BtsCI	GGATG	6 cut(s)	70, 466, 901, 1237, 1585, 2042
BtsI	GCAGTG	2 cut(s)	424, 1998
BtsIMutI	CAGTG	9 cut(s)	231, 300, 417, 424, 613, 876, 1373, 1902, 1998
BveI	ACCTGC	2 cut(s)	220, 665
Cac8I	GCNNGC	3 cut(s)	696, 989, 1746
CaiI	CAGNNNCTG	4 cut(s)	131, 202, 522, 842
CciI	TCATGA	1 cut(s)	2102
CfoI	GCGC	3 cut(s)	99, 993, 1750
Cfr13I	GGNCC	4 cut(s)	143, 199, 932, 2069
Cfr9I	CCCGGG	1 cut(s)	1963
ClaI	ATCGAT	2 cut(s)	377, 1998
CsiI	ACCWGGT	2 cut(s)	201, 781
Csp6I	GTAC	7 cut(s)	572, 833, 1289, 1364, 1673, 1860, 1972
CspCI	CAANNNNNGTGG	2 cut(s)	1216, 1251
CviQI	GTAC	7 cut(s)	572, 833, 1289, 1364, 1673, 1860, 1972
DdeI	CTNAG	9 cut(s)	292, 843, 891, 1146, 1178, 1521, 1731, 1814, 2018
DinI	GGCGCC	1 cut(s)	992
EaeI	YGGCCR	1 cut(s)	1666
Eco130I	CCWWGG	1 cut(s)	1274
Eco24I	GRGCYC	2 cut(s)	1704, 2026
Eco31I	GGTCTC	1 cut(s)	772
Eco32I	GATATC	1 cut(s)	2014
Eco47I	GGWCC	2 cut(s)	199, 2069
Eco57I	CTGAAG	4 cut(s)	285, 1146, 1583, 1633
Eco72I	CACGTG	1 cut(s)	599
Eco81I	CCTNAGG	1 cut(s)	2018
Eco88I	CYCGRG	1 cut(s)	1963
Eco91I	GGTNACC	2 cut(s)	1298, 1715
EcoNI	CCTNNNNNAGG	1 cut(s)	455
EcoO109I	RGGNCCY	2 cut(s)	199, 932
EcoO65I	GGTNACC	2 cut(s)	1298, 1715
EcoRII	CCWGG	4 cut(s)	201, 409, 781, 982
EcoRV	GATATC	1 cut(s)	2014
EcoT14I	CCWWGG	1 cut(s)	1274
EcoT38I	GRGCYC	2 cut(s)	1704, 2026
EgeI	GGCGCC	1 cut(s)	992
EheI	GGCGCC	1 cut(s)	992
ErhI	CCWWGG	1 cut(s)	1274
FalI	AAGNNNNNCTT	2 cut(s)	1581, 1613
FaqI	GGGAC	2 cut(s)	1206, 1946
FauI	CCCGC	1 cut(s)	1889
FbaI	TGATCA	2 cut(s)	360, 1800
FblI	GTMKAC	1 cut(s)	465
Fnu4HI	GCNGC	6 cut(s)	132, 259, 824, 1593, 1986, 1989
FokI	GGATG	6 cut(s)	57, 473, 908, 1244, 1592, 2029
FriOI	GRGCYC	2 cut(s)	1704, 2026
Fsp4HI	GCNGC	6 cut(s)	132, 259, 824, 1593, 1986, 1989
FspBI	CTAG	2 cut(s)	1275, 1659
GlaI	GCGC	3 cut(s)	98, 992, 1749
GluI	GCNGC	6 cut(s)	132, 259, 824, 1593, 1986, 1989
GsuI	CTGGAG	5 cut(s)	873, 969, 1286, 1397, 1860
HaeII	RGCGCY	1 cut(s)	994
HaeIII	GGCC	3 cut(s)	144, 934, 1668
HapII	CCGG	1 cut(s)	1964
HhaI	GCGC	3 cut(s)	99, 993, 1750
Hin1I	GRCGYC	1 cut(s)	991
Hin6I	GCGC	3 cut(s)	97, 991, 1748
HinP1I	GCGC	3 cut(s)	97, 991, 1748
HincII	GTYRAC	2 cut(s)	466, 1638
HindII	GTYRAC	2 cut(s)	466, 1638
HindIII	AAGCTT	1 cut(s)	816
HinfI	GANTC	3 cut(s)	1066, 1464, 1810
HpaII	CCGG	1 cut(s)	1964
HphI	GGTGA	7 cut(s)	355, 623, 650, 1174, 1310, 1709, 1979
Hpy166II	GTNNAC	9 cut(s)	417, 424, 466, 1087, 1638, 1673, 1860, 1974, 2069
Hpy188I	TCNGA	8 cut(s)	508, 518, 751, 939, 1181, 1471, 1602, 2047
Hpy8I	GTNNAC	9 cut(s)	417, 424, 466, 1087, 1638, 1673, 1860, 1974, 2069
HpyAV	CCTTC	5 cut(s)	84, 309, 629, 779, 1607
HpyCH4III	ACNGT	7 cut(s)	185, 331, 421, 880, 1252, 1873, 1906
HpyCH4IV	ACGT	1 cut(s)	598
HpyF10VI	GCNNNNNNNGC	5 cut(s)	32, 131, 1546, 1589, 1824
HpyF3I	CTNAG	9 cut(s)	292, 843, 891, 1146, 1178, 1521, 1731, 1814, 2018
HpySE526I	ACGT	1 cut(s)	598
Hsp92I	GRCGYC	1 cut(s)	991
HspAI	GCGC	3 cut(s)	97, 991, 1748
KasI	GGCGCC	1 cut(s)	990
KpnI	GGTACC	1 cut(s)	575
Ksp22I	TGATCA	2 cut(s)	360, 1800
LmnI	GCTCC	3 cut(s)	128, 482, 1378
Lsp1109I	GCAGC	3 cut(s)	118, 1604, 1972
LweI	GCATC	7 cut(s)	304, 509, 755, 1297, 1570, 1736, 1993
MabI	ACCWGGT	2 cut(s)	201, 781
MaeI	CTAG	2 cut(s)	1275, 1659
MaeII	ACGT	1 cut(s)	598
MaeIII	GTNAC	8 cut(s)	325, 400, 793, 805, 902, 1298, 1417, 1715
MbiI	CCGCTC	1 cut(s)	1896
MboII	GAAGA	4 cut(s)	125, 329, 620, 1177
MflI	RGATCY	5 cut(s)	838, 952, 1136, 1615, 1630
MhlI	GDGCHC	3 cut(s)	419, 1704, 2026
Mly113I	GGCGCC	1 cut(s)	991
MlyI	GAGTC	1 cut(s)	1819
MmeI	TCCRAC	3 cut(s)	196, 983, 1166
MseI	TTAA	5 cut(s)	758, 812, 917, 1494, 1932
MslI	CAYNNNNRTG	4 cut(s)	566, 636, 1284, 2085
MspA1I	CMGCKG	1 cut(s)	1264
MspCI	CTTAAG	1 cut(s)	757
MspI	CCGG	1 cut(s)	1964
MspR9I	CCNGG	6 cut(s)	203, 411, 783, 984, 1964, 1965
MvaI	CCWGG	4 cut(s)	203, 411, 783, 984
MwoI	GCNNNNNNNGC	5 cut(s)	32, 131, 1546, 1589, 1824
NarI	GGCGCC	1 cut(s)	991
NciI	CCSGG	2 cut(s)	1964, 1965
NlaIV	GGNNCC	4 cut(s)	573, 992, 1914, 2071
NmuCI	GTSAC	6 cut(s)	400, 793, 805, 1298, 1417, 1715
NspI	RCATGY	3 cut(s)	830, 1289, 1827
OliI	CACNNNNGTG	1 cut(s)	636
PagI	TCATGA	1 cut(s)	2102
PfeI	GAWTC	2 cut(s)	1066, 1464
PkrI	GCNGC	6 cut(s)	133, 260, 825, 1594, 1987, 1990
PleI	GAGTC	1 cut(s)	1818
PluTI	GGCGCC	1 cut(s)	994
PmaCI	CACGTG	1 cut(s)	599
PmlI	CACGTG	1 cut(s)	599
PpsI	GAGTC	1 cut(s)	1818
Ppu21I	YACGTR	1 cut(s)	599
PpuMI	RGGWCCY	1 cut(s)	199
Psp5II	RGGWCCY	1 cut(s)	199
Psp6I	CCWGG	4 cut(s)	201, 409, 781, 982
PspCI	CACGTG	1 cut(s)	599
PspEI	GGTNACC	2 cut(s)	1298, 1715
PspGI	CCWGG	4 cut(s)	201, 409, 781, 982
PspN4I	GGNNCC	4 cut(s)	573, 992, 1914, 2071
PspPI	GGNCC	4 cut(s)	143, 199, 932, 2069
PspPPI	RGGWCCY	1 cut(s)	199
PstI	CTGCAG	1 cut(s)	391
PstNI	CAGNNNCTG	4 cut(s)	131, 202, 522, 842
PsuI	RGATCY	5 cut(s)	838, 952, 1136, 1615, 1630
PvuII	CAGCTG	1 cut(s)	1264
RsaI	GTAC	7 cut(s)	573, 834, 1290, 1365, 1674, 1861, 1973
RsaNI	GTAC	7 cut(s)	572, 833, 1289, 1364, 1673, 1860, 1972
RseI	CAYNNNNRTG	4 cut(s)	566, 636, 1284, 2085
SalI	GTCGAC	1 cut(s)	464
SaqAI	TTAA	5 cut(s)	758, 812, 917, 1494, 1932
SatI	GCNGC	6 cut(s)	132, 259, 824, 1593, 1986, 1989
Sau96I	GGNCC	4 cut(s)	143, 199, 932, 2069
SchI	GAGTC	1 cut(s)	1819
ScrFI	CCNGG	6 cut(s)	203, 411, 783, 984, 1964, 1965
SduI	GDGCHC	3 cut(s)	419, 1704, 2026
SexAI	ACCWGGT	2 cut(s)	201, 781
SfaNI	GCATC	7 cut(s)	304, 509, 755, 1297, 1570, 1736, 1993
SfcI	CTRYAG	2 cut(s)	387, 1022
SfoI	GGCGCC	1 cut(s)	992
SinI	GGWCC	2 cut(s)	199, 2069
SmaI	CCCGGG	1 cut(s)	1965
SmiMI	CAYNNNNRTG	4 cut(s)	566, 636, 1284, 2085
SmlI	CTYRAG	3 cut(s)	757, 775, 1211
SmoI	CTYRAG	3 cut(s)	757, 775, 1211
SsiI	CCGC	6 cut(s)	258, 575, 788, 823, 1896, 1989
SspDI	GGCGCC	1 cut(s)	990
SspMI	CTAG	2 cut(s)	1275, 1659
StyD4I	CCNGG	6 cut(s)	201, 409, 781, 982, 1962, 1963
StyI	CCWWGG	1 cut(s)	1274
TaaI	ACNGT	7 cut(s)	185, 331, 421, 880, 1252, 1873, 1906
TaiI	ACGT	1 cut(s)	601
TaqI	TCGA	5 cut(s)	377, 465, 740, 1924, 1998
TatI	WGTACW	3 cut(s)	1288, 1859, 1971
TauI	GCSGC	3 cut(s)	261, 826, 1991
TfiI	GAWTC	2 cut(s)	1066, 1464
Tru1I	TTAA	5 cut(s)	758, 812, 917, 1494, 1932
Tru9I	TTAA	5 cut(s)	758, 812, 917, 1494, 1932
TscAI	CASTG	9 cut(s)	231, 300, 424, 431, 613, 883, 1380, 1909, 1998
TseFI	GTSAC	6 cut(s)	400, 793, 805, 1298, 1417, 1715
TseI	GCWGC	3 cut(s)	131, 1592, 1985
Tsp45I	GTSAC	6 cut(s)	400, 793, 805, 1298, 1417, 1715
TspDTI	ATGAA	6 cut(s)	34, 339, 1094, 1700, 1767, 2091
TspGWI	ACGGA	4 cut(s)	458, 1244, 1436, 1623
TspMI	CCCGGG	1 cut(s)	1963
TspRI	CASTG	9 cut(s)	231, 300, 424, 431, 613, 883, 1380, 1909, 1998
Vha464I	CTTAAG	1 cut(s)	757
VneI	GTGCAC	1 cut(s)	415
VpaK11BI	GGWCC	2 cut(s)	199, 2069
XagI	CCTNNNNNAGG	1 cut(s)	455
XapI	RAATTY	3 cut(s)	307, 642, 727
XbaI	TCTAGA	1 cut(s)	1658
XceI	RCATGY	3 cut(s)	830, 1289, 1827
XcmI	CCANNNNNNNNNTGG	1 cut(s)	199
XmaI	CCCGGG	1 cut(s)	1963
XmaJI	CCTAGG	1 cut(s)	1274
XmiI	GTMKAC	1 cut(s)	465
XspI	CTAG	2 cut(s)	1275, 1659

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.