Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr9

Orthogroup ID

OG0004181

Physical Location & Seq

Genomic Coordinates Reverse (-)

4443172 .. 4449090

Gene Structure 5919 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom09g05980.13

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1545 bp

ATGGGGATCAGTAGTATTCTTCGATCCAATCTCAGAACCCAGCTTGTTTCATCTACAAAATATGCTGCTGTATCTAGAAGTCCACAGGAGCATCTCTTTATGGTTCCCTTTCTGGCCCGGTCCTATAGTACAGGGTCGTCTGTGCAAAAGGAAGAACCAACAACTGATGAAAAAGGCCTCGGGTTCAAGGGGCATGATATGCTTGCACCCTTCACAGCTGGGTGGCAGAGTACTGATGTGCATCCTTTGATTATAGAAAAGTCTGAGGGTAGCTATGCTTTTGACAGCAATGGGAAGAAGTATCTTGATGCTCTTGCGGGTCTATGGTGCACAGCATTAGGTGGAAATGAACCTCGACTGGTTGCGGCAGCAACTAAACAGTTGAATACCTTGCCATTTTACCACTCATTTTGGAATCGTACTACTAGACCATCTTTGGACTTGGCAAAAGAACTTCTAGAAACTTTTACAGCTACAAAAATGGCAAAAGCCTTCTTTACTAATAGTGGATCCGAAGCCAATGATACTCAGGTGAAGCTGGTTTGGTATTATAATAATGCACTTGGACGCCCAGATAAAAAGAAATTCATAGCTCGACATAAATCGTACCATGGTTCAACTTTAATAGCCGCAAGTCTTTCTGGCCTCCCTGCTTTGCATCAAAAGTTTGATCTTCCAGCTCCATTTGCATTGCACACTGACTGTCCACATTATTGGCGCCATCACCTTCCTGGTGAGACAGAAGAAGAGTTCTCTACAAGACTAGCCAACAATTTGGAAAATCTTATCCTCAAAGAGGGACCAGAGACGATTGCTGCGTTCATTGCTGAACCTGTCATGGGAGCAGGCGGTGTTATAACTCCACCTGCAACTTATTTTGAAAAGGTTCAAGCTGTTGTGAAGAAATATGACATTCTATTTATTGCCGATGAGGTAATCTGTGCATTTGGAAGGCTTGGCTACATGTATGGGTGTGACAAATACAACATTAAACCAGACCTTGTGTCTGTGGCAAAGGCTCTTTCTTCTGCATATATGCCAATTGGCGCTGTTCTTGTGAGCCCTGAAGTTTCAGATGTCATACACTCTCAAAGCAGCAAGCTTGGTTCTTTTTCTCATGGGTTTACATATTCTGGACACCCCGTAGCCTGTGCAGTTGCAATTGAAACACTCAAGATCTACAAGGAAAGAAATATTGTTGAACAAGTACGGAGCATTGCCCCAAGATTTCAAGATGGTGTAAAAGCCTTCTCTGATAGTCCAATCATAGGGGAGATACGGGGAACTGGGTTGATCCTTGGTACAGAATTCACAGACAATAAGTCACCCAATGATCCATTTCCTGCTGAATGGGGGGTAGGTGCATATTTTGGAGCGCAATGCGAGAAGCATGGGATGCTAGTACGTGTCGCTGGGGATAACATAATGATGTCTCCACCATTTATTATGACTCCTAGTGAGGTTGACGAGTTAATAAGCCTTTATGGGAAAGCATTGAAGGACACTGAAGAATATGTGAAGGAACTCAAATCTAAGCAGAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0001505 GO:0003006 GO:0003674 GO:0003824 GO:0003867 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005774 GO:0005794 GO:0005975 GO:0005984 GO:0005985 GO:0006020 GO:0006066 GO:0006082 GO:0006105 GO:0006520 GO:0006536 GO:0006538 GO:0006540 GO:0006541 GO:0006807 GO:0006935 GO:0006950 GO:0006970 GO:0006979 GO:0007154 GO:0007155 GO:0007275 GO:0008150 GO:0008152 GO:0008270 GO:0008483 GO:0009056 GO:0009063 GO:0009064 GO:0009065 GO:0009311 GO:0009448 GO:0009450 GO:0009605 GO:0009628 GO:0009651 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009865 GO:0009875 GO:0009932 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010154 GO:0010183 GO:0012505 GO:0016020 GO:0016043 GO:0016049 GO:0016054 GO:0016740 GO:0016769 GO:0017144 GO:0019482 GO:0019484 GO:0019751 GO:0019752 GO:0022414 GO:0022610 GO:0022622 GO:0030154 GO:0031090 GO:0032501 GO:0032502 GO:0032787 GO:0032989 GO:0040007 GO:0040011 GO:0042133 GO:0042135 GO:0042221 GO:0042330 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043648 GO:0043649 GO:0044237 GO:0044238 GO:0044248 GO:0044262 GO:0044281 GO:0044282 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0044703 GO:0044706 GO:0046395 GO:0046686 GO:0046872 GO:0046914 GO:0048364 GO:0048367 GO:0048468 GO:0048588 GO:0048589 GO:0048608 GO:0048731 GO:0048856 GO:0048868 GO:0048869 GO:0050896 GO:0050897 GO:0050918 GO:0051704 GO:0060560 GO:0061458 GO:0065007 GO:0065008 GO:0071704 GO:0071840 GO:0072329 GO:0098588 GO:0098609 GO:0098740 GO:0098805 GO:0099402 GO:1901564 GO:1901565 GO:1901575 GO:1901605 GO:1901606 GO:1901615

KEGG Pathways

Metabolic & Signaling

ko00250 ko00650 ko01100 ko01120 map00250 map00650 map01100 map01120

Pfam Domains

Protein Families

Aminotran_3

Protein Analysis

515

Amino Acids

56.55

Weight (kDa)

6.74

Isoelectric Point (pI)

52.64

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004181)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22200 AT3G22200
fragaria_vesca	FvH4_6g39530 FvH4_6g39560
malus_domestica	MD09G1139200.v1.1 MD17G1128700.v1.1
prunus_persica	Prupe.3G186500_v2.0.a1 Prupe.3G186500_v2.0.a1 Prupe.3G186500_v2.0.a1
pyrus_communis	pycom09g05980 pycom17g12080
rosa_chinensis	RchiOBHm_Chr1g0318031 RchiOBHm_Chr2g0136861 RchiOBHm_Chr2g0153591 RchiOBHm_Chr4g0413181 RchiOBHm_Chr7g0235481
rosa_laevigata	RLG00000020713
rosa_multiflora	Rmu_sc0002187.1_g000020 Rmu_sc0018730.1_g000001 Rmu_ssc0000024.1_g000016
rosa_roxburghii	Rroxscaffold_2G00094890 Rroxscaffold_4G00282830
rosa_rugosa	Rorug02G0440800
rosa_samantha	Rh2AG384900 Rh2AG528200 Rh2BG391800 Rh2BG514300 Rh2CG512500 Rh2DG526100 Rh4CG188400 Rh6AG130800
rosa_wichuraiana	Rw2G041360 Rw7G022490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	552, 857
AarI	CACCTGC	1 cut(s)	874
Acc36I	ACCTGC	1 cut(s)	874
AccB1I	GGYRCC	1 cut(s)	717
AciI	CCGC	4 cut(s)	317, 365, 630, 849
AclWI	GGATC	6 cut(s)	14, 18, 504, 517, 1288, 1328
AcsI	RAATTY	2 cut(s)	584, 1307
AcuI	CTGAAG	2 cut(s)	1086, 1527
AcyI	GRCGYC	2 cut(s)	568, 718
AfaI	GTAC	7 cut(s)	130, 232, 421, 608, 1209, 1303, 1404
AfiI	CCNNNNNNNGG	3 cut(s)	796, 839, 1268
AflIII	ACRYGT	2 cut(s)	963, 1405
AgsI	TTSAA	9 cut(s)	187, 385, 618, 881, 890, 1166, 1202, 1232, 1498
AhdI	GACNNNNNGTC	2 cut(s)	1003, 1321
AjnI	CCWGG	1 cut(s)	730
AluBI	AGCT	9 cut(s)	43, 218, 273, 473, 538, 593, 680, 893, 1102
AluI	AGCT	9 cut(s)	43, 218, 273, 473, 538, 593, 680, 893, 1102
Alw21I	GWGCWC	1 cut(s)	332
Alw26I	GTCTC	3 cut(s)	731, 800, 1437
Alw44I	GTGCAC	1 cut(s)	328
AlwI	GGATC	6 cut(s)	14, 18, 504, 517, 1288, 1328
Ama87I	CYCGRG	1 cut(s)	179
AoxI	GGCC	3 cut(s)	114, 175, 643
ApaLI	GTGCAC	1 cut(s)	328
ApeKI	GCWGC	4 cut(s)	65, 368, 815, 1095
ApoI	RAATTY	2 cut(s)	584, 1307
Asp700I	GAANNNNTTC	1 cut(s)	885
AspLEI	GCGC	3 cut(s)	720, 1049, 1378
AspS9I	GGNCC	3 cut(s)	115, 120, 800
AsuC2I	CCSGG	1 cut(s)	118
AsuHPI	GGTGA	4 cut(s)	544, 716, 746, 1317
AvaI	CYCGRG	1 cut(s)	179
AvaII	GGWCC	2 cut(s)	120, 800
BaeGI	GKGCMC	1 cut(s)	332
BaeI	ACNNNNGTAYC	2 cut(s)	516, 549
BamHI	GGATCC	1 cut(s)	509
BanI	GGYRCC	1 cut(s)	717
BanII	GRGCYC	1 cut(s)	1064
Bbv12I	GWGCWC	1 cut(s)	332
BbvI	GCAGC	4 cut(s)	52, 380, 802, 1107
BccI	CCATC	3 cut(s)	439, 729, 1229
BciT130I	CCWGG	1 cut(s)	732
BcnI	CCSGG	1 cut(s)	118
BcoDI	GTCTC	3 cut(s)	731, 800, 1437
BfaI	CTAG	6 cut(s)	75, 426, 458, 764, 1400, 1455
BfmI	CTRYAG	1 cut(s)	124
BfoI	RGCGCY	2 cut(s)	721, 1050
BfuAI	ACCTGC	1 cut(s)	874
BglII	AGATCT	1 cut(s)	1176
BisI	GCNGC	6 cut(s)	66, 366, 369, 630, 816, 1096
BlsI	GCNGC	6 cut(s)	67, 367, 370, 631, 817, 1097
BmcAI	AGTACT	1 cut(s)	232
Bme1390I	CCNGG	2 cut(s)	118, 732
Bme18I	GGWCC	2 cut(s)	120, 800
BmeRI	GACNNNNNGTC	2 cut(s)	1003, 1321
BmeT110I	CYCGRG	1 cut(s)	179
BmgT120I	GGNCC	3 cut(s)	115, 120, 800
BmiI	GGNNCC	4 cut(s)	105, 511, 719, 801
BmrFI	CCNGG	2 cut(s)	118, 732
BmrI	ACTGGG	1 cut(s)	1296
BmsI	GCATC	5 cut(s)	100, 250, 298, 667, 1386
BmuI	ACTGGG	1 cut(s)	1296
BpuEI	CTTGAG	1 cut(s)	1157
BpuMI	CCSGG	1 cut(s)	118
BsaAI	YACGTR	1 cut(s)	1406
BsaBI	GATNNNNATC	1 cut(s)	240
BsaHI	GRCGYC	2 cut(s)	568, 718
BsaJI	CCNNGG	3 cut(s)	178, 610, 1297
Bsc4I	CCNNNNNNNGG	3 cut(s)	796, 839, 1268
Bse1I	ACTGG	2 cut(s)	363, 1291
Bse3DI	GCAATG	5 cut(s)	295, 689, 822, 1215, 1385
Bse8I	GATNNNNATC	1 cut(s)	240
BseBI	CCWGG	1 cut(s)	732
BseDI	CCNNGG	3 cut(s)	178, 610, 1297
BseGI	GGATG	2 cut(s)	241, 1401
BseJI	GATNNNNATC	1 cut(s)	240
BseLI	CCNNNNNNNGG	3 cut(s)	796, 839, 1268
BseMI	GCAATG	5 cut(s)	295, 689, 822, 1215, 1385
BseMII	CTCAG	3 cut(s)	46, 255, 542
BseNI	ACTGG	2 cut(s)	363, 1291
BseSI	GKGCMC	1 cut(s)	332
BseXI	GCAGC	4 cut(s)	52, 380, 802, 1107
BseYI	CCCAGC	3 cut(s)	39, 218, 1412
BsgI	GTGCAG	1 cut(s)	1173
BshFI	GGCC	3 cut(s)	116, 177, 645
BshNI	GGYRCC	1 cut(s)	717
BsiHKAI	GWGCWC	1 cut(s)	332
BsiHKCI	CYCGRG	1 cut(s)	179
BsiSI	CCGG	1 cut(s)	118
BslFI	GGGAC	1 cut(s)	813
BslI	CCNNNNNNNGG	3 cut(s)	796, 839, 1268
BsmAI	GTCTC	3 cut(s)	731, 800, 1437
BsmBI	CGTCTC	1 cut(s)	800
BsmFI	GGGAC	1 cut(s)	813
BsnI	GGCC	3 cut(s)	116, 177, 645
BsoBI	CYCGRG	1 cut(s)	179
Bsp1286I	GDGCHC	2 cut(s)	332, 1064
Bsp143I	GATC	7 cut(s)	6, 23, 509, 670, 1176, 1293, 1333
Bsp19I	CCATGG	1 cut(s)	610
BspACI	CCGC	4 cut(s)	317, 365, 630, 849
BspANI	GGCC	3 cut(s)	116, 177, 645
BspCNI	CTCAG	3 cut(s)	45, 256, 541
BspLI	GGNNCC	4 cut(s)	105, 511, 719, 801
BspMI	ACCTGC	1 cut(s)	874
BspPI	GGATC	6 cut(s)	14, 18, 504, 517, 1288, 1328
BspT107I	GGYRCC	1 cut(s)	717
BsrDI	GCAATG	5 cut(s)	295, 689, 822, 1215, 1385
BsrI	ACTGG	2 cut(s)	363, 1291
BssECI	CCNNGG	3 cut(s)	178, 610, 1297
BssMI	GATC	7 cut(s)	6, 23, 509, 670, 1176, 1293, 1333
BssNI	GRCGYC	2 cut(s)	568, 718
BssT1I	CCWWGG	2 cut(s)	610, 1297
Bst2UI	CCWGG	1 cut(s)	732
Bst4CI	ACNGT	2 cut(s)	381, 704
Bst6I	CTCTTC	1 cut(s)	741
BstACI	GRCGYC	2 cut(s)	568, 718
BstAPI	GCANNNNNTGC	2 cut(s)	199, 1396
BstBAI	YACGTR	1 cut(s)	1406
BstC8I	GCNNGC	3 cut(s)	204, 847, 1100
BstDEI	CTNAG	4 cut(s)	32, 264, 528, 1533
BstDSI	CCRYGG	1 cut(s)	610
BstENI	CCTNNNNNAGG	1 cut(s)	794
BstF5I	GGATG	2 cut(s)	241, 1401
BstH2I	RGCGCY	2 cut(s)	721, 1050
BstHHI	GCGC	3 cut(s)	720, 1049, 1378
BstKTI	GATC	7 cut(s)	9, 26, 512, 673, 1179, 1296, 1336
BstMAI	GTCTC	3 cut(s)	731, 800, 1437
BstMBI	GATC	7 cut(s)	6, 23, 509, 670, 1176, 1293, 1333
BstMWI	GCNNNNNNNGC	4 cut(s)	199, 686, 824, 1396
BstNI	CCWGG	1 cut(s)	732
BstNSI	RCATGY	1 cut(s)	967
BstSCI	CCNGG	2 cut(s)	116, 730
BstSFI	CTRYAG	1 cut(s)	124
BstSLI	GKGCMC	1 cut(s)	332
BstV1I	GCAGC	4 cut(s)	52, 380, 802, 1107
BstX2I	RGATCY	2 cut(s)	509, 1176
BstXI	CCANNNNNNTGG	2 cut(s)	714, 775
BstYI	RGATCY	2 cut(s)	509, 1176
BsuRI	GGCC	3 cut(s)	116, 177, 645
BtgI	CCRYGG	1 cut(s)	610
BtsCI	GGATG	2 cut(s)	241, 1401
BtsIMutI	CAGTG	2 cut(s)	696, 1503
BveI	ACCTGC	1 cut(s)	874
Cac8I	GCNNGC	3 cut(s)	204, 847, 1100
CfoI	GCGC	3 cut(s)	720, 1049, 1378
Cfr13I	GGNCC	3 cut(s)	115, 120, 800
CseI	GACGC	1 cut(s)	576
Csp6I	GTAC	7 cut(s)	129, 231, 420, 607, 1208, 1302, 1403
CspCI	CAANNNNNGTGG	2 cut(s)	392, 427
CviAII	CATG	6 cut(s)	194, 611, 838, 964, 1118, 1391
CviQI	GTAC	7 cut(s)	129, 231, 420, 607, 1208, 1302, 1403
DdeI	CTNAG	4 cut(s)	32, 264, 528, 1533
DinI	GGCGCC	1 cut(s)	719
DpnI	GATC	7 cut(s)	8, 25, 511, 672, 1178, 1295, 1335
DpnII	GATC	7 cut(s)	6, 23, 509, 670, 1176, 1293, 1333
DriI	GACNNNNNGTC	2 cut(s)	1003, 1321
Eam1104I	CTCTTC	1 cut(s)	741
Eam1105I	GACNNNNNGTC	2 cut(s)	1003, 1321
EarI	CTCTTC	1 cut(s)	741
Eco130I	CCWWGG	2 cut(s)	610, 1297
Eco147I	AGGCCT	1 cut(s)	177
Eco24I	GRGCYC	1 cut(s)	1064
Eco47I	GGWCC	2 cut(s)	120, 800
Eco57I	CTGAAG	2 cut(s)	1086, 1527
Eco88I	CYCGRG	1 cut(s)	179
EcoNI	CCTNNNNNAGG	1 cut(s)	794
EcoRI	GAATTC	1 cut(s)	1307
EcoRII	CCWGG	1 cut(s)	730
EcoT14I	CCWWGG	2 cut(s)	610, 1297
EcoT38I	GRGCYC	1 cut(s)	1064
EgeI	GGCGCC	1 cut(s)	719
EheI	GGCGCC	1 cut(s)	719
ErhI	CCWWGG	2 cut(s)	610, 1297
Esp3I	CGTCTC	1 cut(s)	800
FaeI	CATG	6 cut(s)	197, 614, 841, 967, 1121, 1394
FaqI	GGGAC	1 cut(s)	813
FatI	CATG	6 cut(s)	193, 610, 837, 963, 1117, 1390
FauI	CCCGC	1 cut(s)	310
Fnu4HI	GCNGC	6 cut(s)	66, 366, 369, 630, 816, 1096
FokI	GGATG	2 cut(s)	228, 1408
FriOI	GRGCYC	1 cut(s)	1064
Fsp4HI	GCNGC	6 cut(s)	66, 366, 369, 630, 816, 1096
FspBI	CTAG	6 cut(s)	75, 426, 458, 764, 1400, 1455
GlaI	GCGC	3 cut(s)	719, 1048, 1377
GluI	GCNGC	6 cut(s)	66, 366, 369, 630, 816, 1096
GsaI	CCCAGC	3 cut(s)	43, 222, 1416
HaeII	RGCGCY	2 cut(s)	721, 1050
HaeIII	GGCC	3 cut(s)	116, 177, 645
HapII	CCGG	1 cut(s)	118
HgaI	GACGC	1 cut(s)	576
HhaI	GCGC	3 cut(s)	720, 1049, 1378
Hin1I	GRCGYC	2 cut(s)	568, 718
Hin1II	CATG	6 cut(s)	197, 614, 841, 967, 1121, 1394
Hin6I	GCGC	3 cut(s)	718, 1047, 1376
HinP1I	GCGC	3 cut(s)	718, 1047, 1376
HincII	GTYRAC	1 cut(s)	1465
HindII	GTYRAC	1 cut(s)	1465
HindIII	AAGCTT	1 cut(s)	1100
HinfI	GANTC	2 cut(s)	415, 1450
HpaII	CCGG	1 cut(s)	118
HphI	GGTGA	4 cut(s)	544, 716, 746, 1317
Hpy166II	GTNNAC	5 cut(s)	83, 330, 707, 1125, 1465
Hpy188I	TCNGA	5 cut(s)	35, 265, 514, 1075, 1255
Hpy188III	TCNNGA	6 cut(s)	75, 305, 458, 1134, 1174, 1232
Hpy8I	GTNNAC	5 cut(s)	83, 330, 707, 1125, 1465
HpyAV	CCTTC	7 cut(s)	220, 502, 737, 945, 1258, 1492, 1513
HpyCH4III	ACNGT	2 cut(s)	381, 704
HpyCH4IV	ACGT	1 cut(s)	1405
HpyF10VI	GCNNNNNNNGC	4 cut(s)	199, 686, 824, 1396
HpyF3I	CTNAG	4 cut(s)	32, 264, 528, 1533
HpySE526I	ACGT	1 cut(s)	1405
Hsp92I	GRCGYC	2 cut(s)	568, 718
Hsp92II	CATG	6 cut(s)	197, 614, 841, 967, 1121, 1394
HspAI	GCGC	3 cut(s)	718, 1047, 1376
KasI	GGCGCC	1 cut(s)	717
Kzo9I	GATC	7 cut(s)	6, 23, 509, 670, 1176, 1293, 1333
LmnI	GCTCC	5 cut(s)	88, 685, 842, 1212, 1373
Lsp1109I	GCAGC	4 cut(s)	52, 380, 802, 1107
LweI	GCATC	5 cut(s)	100, 250, 298, 667, 1386
MaeI	CTAG	6 cut(s)	75, 426, 458, 764, 1400, 1455
MaeII	ACGT	1 cut(s)	1405
MaeIII	GTNAC	2 cut(s)	974, 1323
MalI	GATC	7 cut(s)	8, 25, 511, 672, 1178, 1295, 1335
MboI	GATC	7 cut(s)	6, 23, 509, 670, 1176, 1293, 1333
MboII	GAAGA	9 cut(s)	11, 164, 307, 665, 755, 758, 913, 1017, 1520
MfeI	CAATTG	2 cut(s)	1041, 1161
MflI	RGATCY	2 cut(s)	509, 1176
MhlI	GDGCHC	2 cut(s)	332, 1064
MluCI	AATT	5 cut(s)	584, 772, 1041, 1161, 1307
Mly113I	GGCGCC	1 cut(s)	718
MlyI	GAGTC	1 cut(s)	1444
MnlI	CCTC	8 cut(s)	188, 259, 363, 656, 790, 800, 925, 1453
MroXI	GAANNNNTTC	1 cut(s)	885
MseI	TTAA	3 cut(s)	623, 990, 1472
MslI	CAYNNNNRTG	1 cut(s)	1427
MspA1I	CMGCKG	1 cut(s)	218
MspI	CCGG	1 cut(s)	118
MspR9I	CCNGG	2 cut(s)	118, 732
MunI	CAATTG	2 cut(s)	1041, 1161
MvaI	CCWGG	1 cut(s)	732
MwoI	GCNNNNNNNGC	4 cut(s)	199, 686, 824, 1396
NarI	GGCGCC	1 cut(s)	718
NciI	CCSGG	1 cut(s)	118
NcoI	CCATGG	1 cut(s)	610
NdeII	GATC	7 cut(s)	6, 23, 509, 670, 1176, 1293, 1333
NlaIII	CATG	6 cut(s)	197, 614, 841, 967, 1121, 1394
NlaIV	GGNNCC	4 cut(s)	105, 511, 719, 801
NmuCI	GTSAC	2 cut(s)	974, 1323
NspI	RCATGY	1 cut(s)	967
PaqCI	CACCTGC	1 cut(s)	874
PceI	AGGCCT	1 cut(s)	177
PciI	ACATGT	1 cut(s)	963
PcsI	WCGNNNNNNNCGW	1 cut(s)	815
PdmI	GAANNNNTTC	1 cut(s)	885
PfeI	GAWTC	1 cut(s)	415
PkrI	GCNGC	6 cut(s)	67, 367, 370, 631, 817, 1097
PleI	GAGTC	1 cut(s)	1444
PluTI	GGCGCC	1 cut(s)	721
PpsI	GAGTC	1 cut(s)	1444
Ppu21I	YACGTR	1 cut(s)	1406
PscI	ACATGT	1 cut(s)	963
PsiI	TTATAA	2 cut(s)	552, 857
Psp6I	CCWGG	1 cut(s)	730
PspFI	CCCAGC	3 cut(s)	39, 218, 1412
PspGI	CCWGG	1 cut(s)	730
PspN4I	GGNNCC	4 cut(s)	105, 511, 719, 801
PspPI	GGNCC	3 cut(s)	115, 120, 800
PsuI	RGATCY	2 cut(s)	509, 1176
PvuII	CAGCTG	1 cut(s)	218
RsaI	GTAC	7 cut(s)	130, 232, 421, 608, 1209, 1303, 1404
RsaNI	GTAC	7 cut(s)	129, 231, 420, 607, 1208, 1302, 1403
RseI	CAYNNNNRTG	1 cut(s)	1427
SaqAI	TTAA	3 cut(s)	623, 990, 1472
SatI	GCNGC	6 cut(s)	66, 366, 369, 630, 816, 1096
Sau3AI	GATC	7 cut(s)	6, 23, 509, 670, 1176, 1293, 1333
Sau96I	GGNCC	3 cut(s)	115, 120, 800
ScaI	AGTACT	1 cut(s)	232
SchI	GAGTC	1 cut(s)	1444
ScrFI	CCNGG	2 cut(s)	118, 732
SduI	GDGCHC	2 cut(s)	332, 1064
SfaNI	GCATC	5 cut(s)	100, 250, 298, 667, 1386
SfcI	CTRYAG	1 cut(s)	124
SfoI	GGCGCC	1 cut(s)	719
SinI	GGWCC	2 cut(s)	120, 800
SmiMI	CAYNNNNRTG	1 cut(s)	1427
SmlI	CTYRAG	1 cut(s)	1172
SmoI	CTYRAG	1 cut(s)	1172
Sse9I	AATT	5 cut(s)	584, 772, 1041, 1161, 1307
SseBI	AGGCCT	1 cut(s)	177
SsiI	CCGC	4 cut(s)	317, 365, 630, 849
SspDI	GGCGCC	1 cut(s)	717
SspI	AATATT	1 cut(s)	1195
SspMI	CTAG	6 cut(s)	75, 426, 458, 764, 1400, 1455
StuI	AGGCCT	1 cut(s)	177
StyD4I	CCNGG	2 cut(s)	116, 730
StyI	CCWWGG	2 cut(s)	610, 1297
TaaI	ACNGT	2 cut(s)	381, 704
TaiI	ACGT	1 cut(s)	1408
TaqI	TCGA	3 cut(s)	22, 355, 595
TasI	AATT	5 cut(s)	584, 772, 1041, 1161, 1307
TatI	WGTACW	2 cut(s)	128, 230
TauI	GCSGC	2 cut(s)	368, 632
TfiI	GAWTC	1 cut(s)	415
Tru1I	TTAA	3 cut(s)	623, 990, 1472
Tru9I	TTAA	3 cut(s)	623, 990, 1472
TscAI	CASTG	2 cut(s)	703, 1510
TseFI	GTSAC	2 cut(s)	974, 1323
TseI	GCWGC	4 cut(s)	65, 368, 815, 1095
Tsp45I	GTSAC	2 cut(s)	974, 1323
TspDTI	ATGAA	5 cut(s)	39, 183, 363, 577, 811
TspGWI	ACGGA	1 cut(s)	1225
TspRI	CASTG	2 cut(s)	703, 1510
VneI	GTGCAC	1 cut(s)	328
VpaK11BI	GGWCC	2 cut(s)	120, 800
XagI	CCTNNNNNAGG	1 cut(s)	794
XapI	RAATTY	2 cut(s)	584, 1307
XbaI	TCTAGA	2 cut(s)	74, 457
XceI	RCATGY	1 cut(s)	967
XcmI	CCANNNNNNNNNTGG	1 cut(s)	728
XmnI	GAANNNNTTC	1 cut(s)	885
XspI	CTAG	6 cut(s)	75, 426, 458, 764, 1400, 1455
ZrmI	AGTACT	1 cut(s)	232

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.