Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0008941

Physical Location & Seq

Genomic Coordinates Forward (+)

15892914 .. 15897585

Gene Structure 4672 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3387 bp

ATGGCAGCGTCCCTGAATAGAGAGCCATCGAAAAAGGCGATAAAAAGCCCTGGAGGTTCTGGTAGCTCTCAAGGCAAAACTAATTCGAGTGGCCAAACTGTGAAGTTTGCGCGAAGAACTTCGAGTGGACGGTATGTGAGTCTGTCTAGAGAAGACCTTGATATGTCCGGAGAATTATCCGGGGACTATATGGACTACACAGTACAGATTCCTGCCACCCCAGATAACCAGCCCATGGACTCATCCGGGGCTGTGAAGGCGGAGGAGCAATATGTTTCTAACTCTTTATTTACCGGAGGGTTCAATAGTACGACGCGTGCACATCTCATGGATAAGGTGATTGATTCGGAGGTGACTCATCCTCAGATGGCTGGAGCCAAAGGCTCTGCATGTATGATACCTGCTTGTGATGGTAAGGTGATGAAGGATGAGAGAGGAGTTGATATAACCCCCTGTGATTGCAGGTTCAAAATCTGTAGAGATTGCTATTTGGATGCACAGAAGAACACTGGCCTTTGTCCGGGTTGCAAGGAGCAATACAGAGTAGGAGACGAATTTGGTGATCCATCGGGTTACAACAATGGAACGCTGCAATTGCCTGGTGCTGACGGAAAAAGGGATAACATGTCTGCGATGAAGAGGAACCAAACCGGAGAACTTGATCACAATAGGTGGTTGTTTGAGAACAAGGGGACTTATGGTGATGGCAATGCTTTCGATCCCCAAGATGACGGGTATGGTGATGGCGGTGGTGATGGCTTCGGAGGGGGCTTGCTGGATGCGGATGACAAGGCTTGGAAACCCCTCGGCAAGATATTGCCAATTGCTACTGCCATTATCACCCCCTACAGGATACTGATCTTCGTTCGGTTAATCGTGCTAAGTTTGTTCCTGCATTGGAGAGTAGTCAATCCAAACAATGATGCAAGATGGCTGTGGATCATGTCGATTATCTGCGAAATATGGTTCGCCTTCTCTTGGATTCAGATCGATCAGACTCCTAAATTTTTCCCCATTAATCGTCAGACCTATCTTGAAGTCCTCCACGACAAGTTTGACAGGCCATCACCATCCAATCCAACGGGCCGGTCTGACCTCCCTGGCACTGACTTCTTTGTATCTACTGCTCGACACACGATCGATCCTGACAAAGAGCCACCTCTCACCACTGCCAACACCATCCTTTCAATCCTAGCCATTGATTACCCGGTCGAAAAGCTAGCATGCTACGTCTCTGATGATGGAGGTGCCCTCCTCACCTTTGAGGCAATGGCGGAAGCTGCTAGTTTCGCAGACTTGTGGGTTCCCTTCTGCCGGAAACACAACATTGAGCCGAGGAACCCTGACAGTTACTTCGCGTTGAAAGTTGACCCGACAAAGAACAAGAGTAGGCTGGACTTTGTGAAGGATAGGAGGAAGATCAAGAGGGAGTATGATGAGTTCAAGGTGAGGATTAACGGTCTTCCAGTTTCGATCAGGAGGCGGTCTGATGCTTTCCATGCCAGGGAGGAAATGCAGCAGTTGAAACATATGAGGGAGAATGGAATTGACCCTTTGGAGCAAGTCAAAGTCCCCAAGGCTACCTGGATGGCTGATGGCACACATTGGCCTGGTGCTTGGTCTGTTCCTTCCAGTGACCATGCCAAAGGTGACCATTCAGGAATTCTTCAGGTGATGCTGAAGCCTCCTAGTCCTGACCCCCTAATGGGAAGTGCCGATGATGACAAGCTCATAGATTTCACAGATGTCGATATACGCCTCCCAATGTTTGTCTACATGTCGCGAGAAAAGCGGCCTGGCTATGATCACAACAAGAAAGCCGGCGCCATGAATGCGCTGGTGAGAGCATCCGCCATCTTGTCAAACGGCCCTTTCATTCTCAACCTTGACTGTGATCACTACATCTACAACTGCAAAGCTGTCCGTGAAGGCATGTGCTTCATGATGGACAAAGGCGGTGAAAACATCTGCTACATTCAGTTTCCTCAGAGATTCGAAGGCATTGATCCCTCGATCGATCGCTATGCCAATCACAACACCGTGTTTTTCGATGGCAATATGCGTGCACTTGATGGTTTGCAGGGTCCGATGTATGTGGGAACCGGGACCATGTTCCGGCGTTTTGCCTTGTACGGTTTTGATCCACCAAATCCTGATAAGTTGCCGGTGAAGAAGGATGATGAGGCACAAGGAGAGCCTTTGACACAGTCGAATACGCAACCTTTGACAGCCAGTGACTTCGACCCGGATCTTGACACCAATCTACTTCCCAAGCGTTTTGGAAATTCAACAATGCTGGCGGAATCCATACCCGTTGCTGAGTACCAAGGTCGCCCCGTAGCTGATCATCCTTCAGTGAAATTCGGACGGCCTCCTGGAGCTCTCAGAGTTCCTCGTGATCCGCTCAATGCCACTACTGTTGCTGAAGCTGTCTCTGCCATTTCTTGCTGGTACGAGGACAAGACCGAATGGGGAGACCGTGTGGGGTGGATTTACGGGTCAGTGACAGAAGATGTGGTGACTGGGTACAGAATGCACAATCGCGGATGGCGCTCGGTGTACTGCGTTACCAAGCGTGACGCATTTCGCGGTTCAGCTCCCATTAATCTTACTGATCGACTCCACCAAGTGCTCCGTTGGGCAACTGGCTCAGTCGAGATTTTTTTCTCCCGGAACAACGCCTTCCTTGCCTCAATGCGCCTCAAGTTACTACAACGTCTTGCCTACATCAATGTCGGCATCTACCCTTTCACCTCAATCTTTCTCATCGTGTACTGCTTCCTCCCTGCGCTTTCACTCTTCAGTGGACAGTTCATTGTGGCGAATCTCAACATCACATTTTTGGTCTACTTGCTAACCATCACTATATGCCTCATAGCTTTGGCTATCCTGGAGGTGAAATGGTCGGGGATCGCGTTGGAAGAGTGGTGGCGAAATGAGCAGTTTTGGCTGATTTCCGGAACCAGCGCTCACTTGGCTGCTGTGGTGCAAGGCCTTCTAAAAGTGATTGCAGGGATTGAAATTTCCTTTACCTTGACGGCCAAGTCAGCTGGAGAGGACAATGAAGATATATATGCTGACCTCTACCTCGTGAAGTGGACTTCCCTCATGATCCCACCAATTGTGATTGCAATGGTGAACATAATCGCAATCGCAGTCGCGTTTTCGAGGGAGGTTTATGCTCTGAATCCTCAGTGGGCGAGGTTTATTGGCGGTGCCTTCTTCAGCTTTTGGGTTTTGGCTCACTTGTATCCTTTTGCCAAGGGTTTGATGGGAAGAAGAAGGAAGACCCCTACCATTGTGTTTGTTTGGTCGGGTCTCATTGCAATTACACTTTCCTTGCTCTGGGTCGCCATTAACCCGCCCGCCGTTGTTGTCGTTGGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000030 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0008150 GO:0008152 GO:0009846 GO:0009856 GO:0009987 GO:0012505 GO:0016740 GO:0016757 GO:0016758 GO:0019187 GO:0022414 GO:0032501 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0044706 GO:0051704 GO:0051753 GO:0070085 GO:0071554 GO:0071669 GO:0097502

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt zf-RING_4

Protein Analysis

1129

Amino Acids

125.87

Weight (kDa)

6.33

Isoelectric Point (pI)

38.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RING_4	PF14570	133 - 181	2.6e-15	RING/Ubox like zinc-binding domain
Cellulose_synt	PF03552	370 - 1122	0.0	Cellulose synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008941)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G38190
fragaria_vesca	FvH4_2g17120
malus_domestica	MD05G1144100.v1.1 MD05G1144400.v1.1 MD10G1143700.v1.1
prunus_persica	Prupe.8G182500_v2.0.a1
pyrus_communis	pycom05g13840 pycom05g13860 pycom05g13910 pycom05g13940 pycom10g12370
rosa_chinensis	RchiOBHm_Chr6g0281541
rosa_laevigata	RLG00000012965
rosa_multiflora	Rmu_sc0012649.1_g000003
rosa_roxburghii	Rroxscaffold_7G00187020
rosa_rugosa	Rorug06G0141300 Rorug06G0141400
rosa_samantha	Rh6AG253900 Rh6BG256800 Rh6CG256000 Rh6DG248000
rosa_wichuraiana	Rw6G022040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	3043
Acc36I	ACCTGC	2 cut(s)	409, 453
AccB1I	GGYRCC	3 cut(s)	1247, 1823, 3215
AccB7I	CCANNNNNTGG	1 cut(s)	235
AccBSI	CCGCTC	1 cut(s)	2404
AccI	GTMKAC	2 cut(s)	1773, 2847
AccII	CGCG	8 cut(s)	112, 316, 1358, 1783, 2544, 2589, 2915, 3161
AccIII	TCCGGA	2 cut(s)	167, 2957
AcoI	YGGCCR	2 cut(s)	91, 3039
AcsI	RAATTY	6 cut(s)	554, 1004, 1662, 2284, 2360, 3021
AcuI	CTGAAG	6 cut(s)	1652, 1700, 2337, 2445, 2785, 3208
AcyI	GRCGYC	1 cut(s)	1824
AdeI	CACNNNGTG	1 cut(s)	2629
AfaI	GTAC	8 cut(s)	204, 310, 2132, 2324, 2453, 2528, 2561, 2774
AfeI	AGCGCT	1 cut(s)	2968
AflIII	ACRYGT	3 cut(s)	314, 624, 1776
AgsI	TTSAA	9 cut(s)	304, 469, 1037, 1188, 1363, 1444, 1525, 2289, 3020
AjnI	CCWGG	9 cut(s)	49, 598, 1099, 1502, 1583, 1609, 1795, 2374, 2889
Alw21I	GWGCWC	4 cut(s)	322, 2068, 2383, 2634
Alw26I	GTCTC	5 cut(s)	543, 1237, 2437, 2469, 3323
Alw44I	GTGCAC	2 cut(s)	318, 2064
Aor13HI	TCCGGA	2 cut(s)	167, 2957
Aor51HI	AGCGCT	1 cut(s)	2968
ApaLI	GTGCAC	2 cut(s)	318, 2064
ApeKI	GCWGC	5 cut(s)	5, 589, 1280, 1516, 2978
ApoI	RAATTY	6 cut(s)	554, 1004, 1662, 2284, 2360, 3021
ArsI	GACNNNNNNTTYG	2 cut(s)	1337, 1369
AseI	ATTAAT	2 cut(s)	1017, 2604
Asp700I	GAANNNNTTC	1 cut(s)	118
AspLEI	GCGC	7 cut(s)	112, 1826, 1837, 2553, 2700, 2791, 2969
AspS9I	GGNCC	4 cut(s)	1084, 1868, 2084, 2106
AsuC2I	CCSGG	7 cut(s)	181, 247, 522, 1208, 2104, 2246, 2671
AsuII	TTCGAA	1 cut(s)	1995
AsuNHI	GCTAGC	1 cut(s)	1219
AvaII	GGWCC	2 cut(s)	2084, 2106
BaeGI	GKGCMC	3 cut(s)	322, 1252, 2068
BalI	TGGCCA	1 cut(s)	93
BanI	GGYRCC	3 cut(s)	1247, 1823, 3215
BanII	GRGCYC	1 cut(s)	2383
BauI	CACGAG	2 cut(s)	2394, 3089
BbsI	GAAGAC	3 cut(s)	159, 1454, 3293
Bbv12I	GWGCWC	4 cut(s)	322, 2068, 2383, 2634
BbvI	GCAGC	5 cut(s)	17, 576, 1267, 1528, 2965
BceAI	ACGGC	4 cut(s)	1882, 2384, 3054, 3353
BcgI	CGANNNNNNTGC	4 cut(s)	697, 731, 2006, 2040
BciT130I	CCWGG	9 cut(s)	51, 600, 1101, 1504, 1585, 1611, 1797, 2376, 2891
BciVI	GTATCC	2 cut(s)	846, 3261
BclI	TGATCA	4 cut(s)	661, 1804, 1894, 2344
BcnI	CCSGG	7 cut(s)	181, 247, 522, 1208, 2104, 2246, 2671
BcoDI	GTCTC	5 cut(s)	543, 1237, 2437, 2469, 3323
BfaI	CTAG	5 cut(s)	147, 1193, 1220, 1284, 1689
BfmI	CTRYAG	2 cut(s)	475, 847
BfoI	RGCGCY	3 cut(s)	1827, 2554, 2970
BfuAI	ACCTGC	2 cut(s)	409, 453
BfuI	GTATCC	2 cut(s)	846, 3261
BisI	GCNGC	6 cut(s)	6, 590, 1281, 1517, 1793, 2979
BlsI	GCNGC	6 cut(s)	7, 591, 1282, 1518, 1794, 2980
Bme18I	GGWCC	2 cut(s)	2084, 2106
BmgT120I	GGNCC	4 cut(s)	1084, 1868, 2084, 2106
BmrI	ACTGGG	1 cut(s)	2532
BmsI	GCATC	7 cut(s)	484, 769, 913, 1480, 1665, 1856, 2748
BmtI	GCTAGC	1 cut(s)	1223
BmuI	ACTGGG	1 cut(s)	2532
BpiI	GAAGAC	3 cut(s)	159, 1454, 3293
BplI	GAGNNNNNCTC	2 cut(s)	1236, 1268
BpmI	CTGGAG	5 cut(s)	72, 393, 2397, 2912, 3072
Bpu14I	TTCGAA	1 cut(s)	1995
BpuEI	CTTGAG	2 cut(s)	54, 2687
BpuMI	CCSGG	7 cut(s)	181, 247, 522, 1208, 2104, 2246, 2671
Bsa29I	ATCGAT	3 cut(s)	990, 1140, 2016
BsaBI	GATNNNNATC	2 cut(s)	857, 986
BsaHI	GRCGYC	1 cut(s)	1824
BsaI	GGTCTC	2 cut(s)	2469, 3323
BsaWI	WCCGGW	4 cut(s)	167, 293, 650, 2957
BsaXI	ACNNNNNCTCC	2 cut(s)	2466, 2496
Bse118I	RCCGGY	3 cut(s)	1086, 1820, 2164
Bse1I	ACTGG	6 cut(s)	514, 1466, 1632, 2232, 2527, 2650
Bse3DI	GCAATG	4 cut(s)	715, 1275, 3138, 3321
Bse8I	GATNNNNATC	2 cut(s)	857, 986
BseAI	TCCGGA	2 cut(s)	167, 2957
BseBI	CCWGG	9 cut(s)	51, 600, 1101, 1504, 1585, 1611, 1797, 2376, 2891
BseCI	ATCGAT	3 cut(s)	990, 1140, 2016
BseJI	GATNNNNATC	2 cut(s)	857, 986
BseMI	GCAATG	4 cut(s)	715, 1275, 3138, 3321
BseMII	CTCAG	6 cut(s)	377, 2000, 2310, 2398, 2664, 3206
BseNI	ACTGG	6 cut(s)	514, 1466, 1632, 2232, 2527, 2650
BseRI	GAGGAG	3 cut(s)	278, 450, 1244
BseSI	GKGCMC	3 cut(s)	322, 1252, 2068
BseXI	GCAGC	5 cut(s)	17, 576, 1267, 1528, 2965
Bsh1236I	CGCG	8 cut(s)	112, 316, 1358, 1783, 2544, 2589, 2915, 3161
Bsh1285I	CGRYCG	4 cut(s)	1140, 1212, 2016, 2020
BshNI	GGYRCC	3 cut(s)	1247, 1823, 3215
BshVI	ATCGAT	3 cut(s)	990, 1140, 2016
BsiEI	CGRYCG	4 cut(s)	1140, 1212, 2016, 2020
BsiHKAI	GWGCWC	4 cut(s)	322, 2068, 2383, 2634
BslFI	GGGAC	4 cut(s)	197, 706, 1556, 2119
BsmAI	GTCTC	5 cut(s)	543, 1237, 2437, 2469, 3323
BsmBI	CGTCTC	2 cut(s)	543, 1237
BsmFI	GGGAC	4 cut(s)	197, 706, 1556, 2119
BsmI	GAATGC	2 cut(s)	1837, 2538
Bso31I	GGTCTC	2 cut(s)	2469, 3323
Bsp119I	TTCGAA	1 cut(s)	1995
Bsp1286I	GDGCHC	5 cut(s)	322, 1252, 2068, 2383, 2634
Bsp13I	TCCGGA	2 cut(s)	167, 2957
Bsp19I	CCATGG	1 cut(s)	234
Bsp68I	TCGCGA	1 cut(s)	1783
BspCNI	CTCAG	6 cut(s)	376, 1999, 2311, 2397, 2663, 3205
BspDI	ATCGAT	3 cut(s)	990, 1140, 2016
BspEI	TCCGGA	2 cut(s)	167, 2957
BspFNI	CGCG	8 cut(s)	112, 316, 1358, 1783, 2544, 2589, 2915, 3161
BspHI	TCATGA	2 cut(s)	1941, 3108
BspMI	ACCTGC	2 cut(s)	409, 453
BspOI	GCTAGC	1 cut(s)	1223
BspT104I	TTCGAA	1 cut(s)	1995
BspT107I	GGYRCC	3 cut(s)	1247, 1823, 3215
BspTNI	GGTCTC	2 cut(s)	2469, 3323
BsrBI	CCGCTC	1 cut(s)	2404
BsrDI	GCAATG	4 cut(s)	715, 1275, 3138, 3321
BsrFI	RCCGGY	3 cut(s)	1086, 1820, 2164
BsrI	ACTGG	6 cut(s)	514, 1466, 1632, 2232, 2527, 2650
BssAI	RCCGGY	3 cut(s)	1086, 1820, 2164
BssNI	GRCGYC	1 cut(s)	1824
BssSI	CACGAG	2 cut(s)	2394, 3089
BssT1I	CCWWGG	4 cut(s)	234, 1575, 2326, 3261
Bst2BI	CACGAG	2 cut(s)	2394, 3089
Bst2UI	CCWGG	9 cut(s)	51, 600, 1101, 1504, 1585, 1611, 1797, 2376, 2891
Bst6I	CTCTTC	3 cut(s)	632, 2804, 2916
BstACI	GRCGYC	1 cut(s)	1824
BstBI	TTCGAA	1 cut(s)	1995
BstC8I	GCNNGC	8 cut(s)	318, 773, 1221, 1225, 1822, 2064, 2298, 3366
BstDEI	CTNAG	7 cut(s)	363, 881, 1986, 2319, 2384, 2650, 3192
BstDSI	CCRYGG	1 cut(s)	234
BstEII	GGTNACC	1 cut(s)	1649
BstFNI	CGCG	8 cut(s)	112, 316, 1358, 1783, 2544, 2589, 2915, 3161
BstH2I	RGCGCY	3 cut(s)	1827, 2554, 2970
BstHHI	GCGC	7 cut(s)	112, 1826, 1837, 2553, 2700, 2791, 2969
BstMAI	GTCTC	5 cut(s)	543, 1237, 2437, 2469, 3323
BstMCI	CGRYCG	4 cut(s)	1140, 1212, 2016, 2020
BstNI	CCWGG	9 cut(s)	51, 600, 1101, 1504, 1585, 1611, 1797, 2376, 2891
BstNSI	RCATGY	5 cut(s)	393, 628, 1227, 1780, 1936
BstPI	GGTNACC	1 cut(s)	1649
BstSFI	CTRYAG	2 cut(s)	475, 847
BstSLI	GKGCMC	3 cut(s)	322, 1252, 2068
BstUI	CGCG	8 cut(s)	112, 316, 1358, 1783, 2544, 2589, 2915, 3161
BstV1I	GCAGC	5 cut(s)	17, 576, 1267, 1528, 2965
BstV2I	GAAGAC	3 cut(s)	159, 1454, 3293
BstX2I	RGATCY	1 cut(s)	2248
BstYI	RGATCY	1 cut(s)	2248
Bsu15I	ATCGAT	3 cut(s)	990, 1140, 2016
BsuI	GTATCC	2 cut(s)	846, 3261
BsuTUI	ATCGAT	3 cut(s)	990, 1140, 2016
BtgI	CCRYGG	1 cut(s)	234
BtgZI	GCGATG	1 cut(s)	647
BtsI	GCAGTG	1 cut(s)	1167
BtsIMutI	CAGTG	9 cut(s)	507, 1104, 1167, 1639, 2239, 2361, 2508, 2809, 3200
BtuMI	TCGCGA	1 cut(s)	1783
BveI	ACCTGC	2 cut(s)	409, 453
Cac8I	GCNNGC	8 cut(s)	318, 773, 1221, 1225, 1822, 2064, 2298, 3366
CciI	TCATGA	2 cut(s)	1941, 3108
CfoI	GCGC	7 cut(s)	112, 1826, 1837, 2553, 2700, 2791, 2969
Cfr10I	RCCGGY	3 cut(s)	1086, 1820, 2164
Cfr13I	GGNCC	4 cut(s)	1084, 1868, 2084, 2106
ClaI	ATCGAT	3 cut(s)	990, 1140, 2016
CseI	GACGC	2 cut(s)	322, 2588
Csp6I	GTAC	8 cut(s)	203, 309, 2131, 2323, 2452, 2527, 2560, 2773
CspCI	CAANNNNNGTGG	2 cut(s)	2401, 2436
CviQI	GTAC	8 cut(s)	203, 309, 2131, 2323, 2452, 2527, 2560, 2773
DdeI	CTNAG	7 cut(s)	363, 881, 1986, 2319, 2384, 2650, 3192
DinI	GGCGCC	1 cut(s)	1825
DraIII	CACNNNGTG	1 cut(s)	2629
DrdI	GACNNNNNNGTC	1 cut(s)	3043
DseDI	GACNNNNNNGTC	1 cut(s)	3043
EaeI	YGGCCR	2 cut(s)	91, 3039
Eam1104I	CTCTTC	3 cut(s)	632, 2804, 2916
EarI	CTCTTC	3 cut(s)	632, 2804, 2916
EciI	GGCGGA	4 cut(s)	275, 1289, 1840, 2315
Ecl136II	GAGCTC	1 cut(s)	2381
Eco130I	CCWWGG	4 cut(s)	234, 1575, 2326, 3261
Eco147I	AGGCCT	1 cut(s)	2994
Eco24I	GRGCYC	1 cut(s)	2383
Eco31I	GGTCTC	2 cut(s)	2469, 3323
Eco47I	GGWCC	2 cut(s)	2084, 2106
Eco47III	AGCGCT	1 cut(s)	2968
Eco53kI	GAGCTC	1 cut(s)	2381
Eco57I	CTGAAG	6 cut(s)	1652, 1700, 2337, 2445, 2785, 3208
Eco91I	GGTNACC	1 cut(s)	1649
EcoICRI	GAGCTC	1 cut(s)	2381
EcoO65I	GGTNACC	1 cut(s)	1649
EcoRI	GAATTC	1 cut(s)	1662
EcoRII	CCWGG	9 cut(s)	49, 598, 1099, 1502, 1583, 1609, 1795, 2374, 2889
EcoT14I	CCWWGG	4 cut(s)	234, 1575, 2326, 3261
EcoT38I	GRGCYC	1 cut(s)	2383
EgeI	GGCGCC	1 cut(s)	1825
EheI	GGCGCC	1 cut(s)	1825
ErhI	CCWWGG	4 cut(s)	234, 1575, 2326, 3261
Esp3I	CGTCTC	2 cut(s)	543, 1237
FaqI	GGGAC	4 cut(s)	197, 706, 1556, 2119
FauI	CCCGC	2 cut(s)	3369, 3373
FauNDI	CATATG	1 cut(s)	1530
FbaI	TGATCA	4 cut(s)	661, 1804, 1894, 2344
FblI	GTMKAC	2 cut(s)	1773, 2847
Fnu4HI	GCNGC	6 cut(s)	6, 590, 1281, 1517, 1793, 2979
FriOI	GRGCYC	1 cut(s)	2383
Fsp4HI	GCNGC	6 cut(s)	6, 590, 1281, 1517, 1793, 2979
FspBI	CTAG	5 cut(s)	147, 1193, 1220, 1284, 1689
GlaI	GCGC	7 cut(s)	111, 1825, 1836, 2552, 2699, 2790, 2968
GluI	GCNGC	6 cut(s)	6, 590, 1281, 1517, 1793, 2979
GsuI	CTGGAG	5 cut(s)	72, 393, 2397, 2912, 3072
HaeII	RGCGCY	3 cut(s)	1827, 2554, 2970
HgaI	GACGC	2 cut(s)	322, 2588
HhaI	GCGC	7 cut(s)	112, 1826, 1837, 2553, 2700, 2791, 2969
Hin1I	GRCGYC	1 cut(s)	1824
Hin6I	GCGC	7 cut(s)	110, 1824, 1835, 2551, 2698, 2789, 2967
HinP1I	GCGC	7 cut(s)	110, 1824, 1835, 2551, 2698, 2789, 2967
HincII	GTYRAC	1 cut(s)	1369
HindII	GTYRAC	1 cut(s)	1369
Hpy99I	CGWCG	1 cut(s)	316
HpyCH4IV	ACGT	2 cut(s)	1230, 2716
HpyF3I	CTNAG	7 cut(s)	363, 881, 1986, 2319, 2384, 2650, 3192
HpySE526I	ACGT	2 cut(s)	1230, 2716
Hsp92I	GRCGYC	1 cut(s)	1824
HspAI	GCGC	7 cut(s)	110, 1824, 1835, 2551, 2698, 2789, 2967
KasI	GGCGCC	1 cut(s)	1823
Kpn2I	TCCGGA	2 cut(s)	167, 2957
KroI	GCCGGC	1 cut(s)	1820
KroNI	GCCGGC	1 cut(s)	1822
Ksp22I	TGATCA	4 cut(s)	661, 1804, 1894, 2344
LmnI	GCTCC	7 cut(s)	265, 374, 532, 1558, 2378, 2602, 2637
Lsp1109I	GCAGC	5 cut(s)	17, 576, 1267, 1528, 2965
LweI	GCATC	7 cut(s)	484, 769, 913, 1480, 1665, 1856, 2748
MaeI	CTAG	5 cut(s)	147, 1193, 1220, 1284, 1689
MaeII	ACGT	2 cut(s)	1230, 2716
MbiI	CCGCTC	1 cut(s)	2404
MfeI	CAATTG	3 cut(s)	593, 822, 3120
MflI	RGATCY	1 cut(s)	2248
MhlI	GDGCHC	5 cut(s)	322, 1252, 2068, 2383, 2634
MlsI	TGGCCA	1 cut(s)	93
MluI	ACGCGT	1 cut(s)	314
MluNI	TGGCCA	1 cut(s)	93
Mly113I	GGCGCC	1 cut(s)	1824
MlyI	GAGTC	5 cut(s)	148, 233, 349, 991, 2613
MmeI	TCCRAC	2 cut(s)	1103, 2898
Mox20I	TGGCCA	1 cut(s)	93
MroI	TCCGGA	2 cut(s)	167, 2957
MroNI	GCCGGC	1 cut(s)	1820
MroXI	GAANNNNTTC	1 cut(s)	118
MscI	TGGCCA	1 cut(s)	93
MseI	TTAA	6 cut(s)	872, 1017, 1455, 2604, 3357, 3385
Msp20I	TGGCCA	1 cut(s)	93
MspA1I	CMGCKG	1 cut(s)	3050
MunI	CAATTG	3 cut(s)	593, 822, 3120
Mva1269I	GAATGC	2 cut(s)	1837, 2538
MvaI	CCWGG	9 cut(s)	51, 600, 1101, 1504, 1585, 1611, 1797, 2376, 2891
MvnI	CGCG	8 cut(s)	112, 316, 1358, 1783, 2544, 2589, 2915, 3161
NaeI	GCCGGC	1 cut(s)	1822
NarI	GGCGCC	1 cut(s)	1824
NciI	CCSGG	7 cut(s)	181, 247, 522, 1208, 2104, 2246, 2671
NcoI	CCATGG	1 cut(s)	234
NdeI	CATATG	1 cut(s)	1530
NgoMIV	GCCGGC	1 cut(s)	1820
NheI	GCTAGC	1 cut(s)	1219
NmeAIII	GCCGAG	2 cut(s)	786, 1359
NmuCI	GTSAC	7 cut(s)	352, 1634, 1649, 2234, 2503, 2518, 2576
NruI	TCGCGA	1 cut(s)	1783
NspI	RCATGY	5 cut(s)	393, 628, 1227, 1780, 1936
NspV	TTCGAA	1 cut(s)	1995
PaeI	GCATGC	1 cut(s)	1227
PagI	TCATGA	2 cut(s)	1941, 3108
PceI	AGGCCT	1 cut(s)	2994
PciI	ACATGT	2 cut(s)	624, 1776
PcsI	WCGNNNNNNNCGW	2 cut(s)	35, 2912
PctI	GAATGC	2 cut(s)	1837, 2538
PdiI	GCCGGC	1 cut(s)	1822
PdmI	GAANNNNTTC	1 cut(s)	118
PfeI	GAWTC	7 cut(s)	208, 344, 982, 1992, 2303, 2824, 3187
PflFI	GACNNNGTC	1 cut(s)	2206
PflMI	CCANNNNNTGG	1 cut(s)	235
PfoI	TCCNGGA	3 cut(s)	2374, 2669, 2889
PkrI	GCNGC	6 cut(s)	7, 591, 1282, 1518, 1794, 2980
Ple19I	CGATCG	3 cut(s)	1140, 2016, 2020
PleI	GAGTC	5 cut(s)	147, 233, 349, 991, 2613
PluTI	GGCGCC	1 cut(s)	1827
PpsI	GAGTC	5 cut(s)	147, 233, 349, 991, 2613
PscI	ACATGT	2 cut(s)	624, 1776
PshBI	ATTAAT	2 cut(s)	1017, 2604
Psp124BI	GAGCTC	1 cut(s)	2383
Psp6I	CCWGG	9 cut(s)	49, 598, 1099, 1502, 1583, 1609, 1795, 2374, 2889
PspEI	GGTNACC	1 cut(s)	1649
PspGI	CCWGG	9 cut(s)	49, 598, 1099, 1502, 1583, 1609, 1795, 2374, 2889
PspPI	GGNCC	4 cut(s)	1084, 1868, 2084, 2106
PsrI	GAACNNNNNNTAC	2 cut(s)	1424, 1456
PsuI	RGATCY	1 cut(s)	2248
PsyI	GACNNNGTC	1 cut(s)	2206
PvuI	CGATCG	3 cut(s)	1140, 2016, 2020
PvuII	CAGCTG	1 cut(s)	3050
RruI	TCGCGA	1 cut(s)	1783
RsaI	GTAC	8 cut(s)	204, 310, 2132, 2324, 2453, 2528, 2561, 2774
RsaNI	GTAC	8 cut(s)	203, 309, 2131, 2323, 2452, 2527, 2560, 2773
SacI	GAGCTC	1 cut(s)	2383
SaqAI	TTAA	6 cut(s)	872, 1017, 1455, 2604, 3357, 3385
SatI	GCNGC	6 cut(s)	6, 590, 1281, 1517, 1793, 2979
Sau96I	GGNCC	4 cut(s)	1084, 1868, 2084, 2106
SchI	GAGTC	5 cut(s)	148, 233, 349, 991, 2613
SduI	GDGCHC	5 cut(s)	322, 1252, 2068, 2383, 2634
SfaNI	GCATC	7 cut(s)	484, 769, 913, 1480, 1665, 1856, 2748
SfcI	CTRYAG	2 cut(s)	475, 847
SfoI	GGCGCC	1 cut(s)	1825
SfuI	TTCGAA	1 cut(s)	1995
SinI	GGWCC	2 cut(s)	2084, 2106
SmlI	CTYRAG	2 cut(s)	69, 2702
SmoI	CTYRAG	2 cut(s)	69, 2702
SphI	GCATGC	1 cut(s)	1227
SseBI	AGGCCT	1 cut(s)	2994
SspDI	GGCGCC	1 cut(s)	1823
SspMI	CTAG	5 cut(s)	147, 1193, 1220, 1284, 1689
SstI	GAGCTC	1 cut(s)	2383
StuI	AGGCCT	1 cut(s)	2994
StyI	CCWWGG	4 cut(s)	234, 1575, 2326, 3261
TaiI	ACGT	2 cut(s)	1233, 2719
TaqII	GACCGA	1 cut(s)	2480
TatI	WGTACW	3 cut(s)	202, 2559, 2772
TauI	GCSGC	1 cut(s)	1795
TfiI	GAWTC	7 cut(s)	208, 344, 982, 1992, 2303, 2824, 3187
Tru1I	TTAA	6 cut(s)	872, 1017, 1455, 2604, 3357, 3385
Tru9I	TTAA	6 cut(s)	872, 1017, 1455, 2604, 3357, 3385
TscAI	CASTG	9 cut(s)	514, 1111, 1174, 1639, 2239, 2361, 2508, 2809, 3200
TseFI	GTSAC	7 cut(s)	352, 1634, 1649, 2234, 2503, 2518, 2576
TseI	GCWGC	5 cut(s)	5, 589, 1280, 1516, 2978
Tsp45I	GTSAC	7 cut(s)	352, 1634, 1649, 2234, 2503, 2518, 2576
TspDTI	ATGAA	7 cut(s)	437, 650, 1844, 1864, 1930, 2803, 3078
TspGWI	ACGGA	3 cut(s)	624, 1913, 2624
TspRI	CASTG	9 cut(s)	514, 1111, 1174, 1639, 2239, 2361, 2508, 2809, 3200
Tth111I	GACNNNGTC	1 cut(s)	2206
Van91I	CCANNNNNTGG	1 cut(s)	235
VneI	GTGCAC	2 cut(s)	318, 2064
VpaK11BI	GGWCC	2 cut(s)	2084, 2106
VspI	ATTAAT	2 cut(s)	1017, 2604
XapI	RAATTY	6 cut(s)	554, 1004, 1662, 2284, 2360, 3021
XbaI	TCTAGA	1 cut(s)	146
XceI	RCATGY	5 cut(s)	393, 628, 1227, 1780, 1936
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1834, 2971, 3268
XmiI	GTMKAC	2 cut(s)	1773, 2847
XmnI	GAANNNNTTC	1 cut(s)	118
XspI	CTAG	5 cut(s)	147, 1193, 1220, 1284, 1689

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.