pycom10g22370

Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
OG0007664
Physical Location & Seq
Forward (+)
24751068 .. 24753886
2819 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2394 bp
ATGGCGAATATGGGCTCGATTGCCTCACTGGTGATGGCGGTTATCATCAATGGTAATGATGGTAATGATTCAACAAAGCTTTGGGGGTTGGTGGTGTGCCACCACACTTCCCCCCGCCATGTCCCTTTCCCTCTTCGCTATGCTTGTCAGTTTCTTATGCAGGCATTTGGGCTGCAAATCTACATGGAGCTTCAATTGGCTTCGCAGTTGGCTGAGAAAAAGATTCTCAGAACACAAACCTTGCTTTGTGACATGCTCCTTCGGGACTCCCCATCTGGTATTGTGACCCAATCTCCGAGTATAATGGATCTCGTGAAGTGTGACGGAGCTGCATTGTACTATGGCGGGACATGTTGGTTGATGGGGGTAACTCCAACCGAATCACAGGTTAAAGATATAGCAGAGTGGCTGCTAAAAAATCATGGGGATTCCACAGGTCTGAGTACTGATAGTTTGGCGGAAACTGGTTACCCTGATGCACCTTTACTGGGTAATGCAGTTTGTGGTATGGCTACCGCAAGAGTCAGTTCAAAAGATTTCTTGTTTTGGTTCAGGTCGCACACGGCAGCGGAAGTCAAATGGGGAGGAGCTAAGCATCATCCAGAGGATAAGGATGACGGTGGAAAGATGCACCCGAGATCATCATTTAAAGCTTTTATTGAAATAGTAAAAAGTAGAAGTTTGCCTTGGGAGGTCTCTGAGATTAATGCCATCCACTCTTTACAGCTCATAATGAGAGACTCGTTTCAGGATATCGAGGAAACTGGTTCGAAGGCAGTACAACAGAGTGATGCTGAGATGCAGTTGCAGGAGATAGATGAACTCAGTTCCGCGGCATGTGAAATGGTTAAATTGATCGAGACAGCTTCAGTTCCGATTTTTGGGGTTGATTCGGATGGTCTCATCAATGGATGGAATGCAAAAATAGCTGAGTTGACAGGACTACAAGATAGCGAAGCTATGGGCAAGTCCCTCGTTGACGAAATTGTTTATGAGGACTCGCGTGAAGCGGTTGAAAATCTTTTACGTAGAGCGTTACAAGGTGAGGAGGACAAGAACATTGAGTTAAAATTGAGAAATTTTGGGCTTCCACAACATAAGTCGGTTGTCTATATTGTGGCCAACACTTGCACGAGTAGGAGTCCTGCAAAGGATGTTGTCGGTGTATGCTTCGTGGGTCAGGATATTACTTGTGAAAAGGTTGTTATGGATAAATTCATCCGCTTGCAAGGGGATTACAAGGCCATCATACAGAGTCTTAACCCCTTGATTCCACCGATATTTGCATCTGATGAGAAAGCATGTTGCTCAGAATGGAATGCAGCCATGGAAAATCTGACTGGTTGGACTCGAGAAGACGTTATTGGTAAAACGCTTATTGGGGAAATCTTTGGAGGTTTCTGTCAACTGAAGGGTCAAGATACGCTGACTAAGTTTATGATTATGTTGTACCAAGGAATCAGTGGTAAAGAGATTGAGAAGTTTCCGTTCGGATTTTTTGATAGAAAGGGTAATTTTGTTGAGGTGCTTTTAACTGCTAGCAAGAGGACTGATGGAGGTGGGAATATAATCGGTTGTTTTTGTTTCTTGCAAATTTTTTTGCGTGACATGCAGCCGGCCTTGGAAGGACACAGACAAGAGGATATAGAATACTTTTCGAAACTTAAGCAATTAACATACATGCGGCAAGAGATGAAAAATCCTTTAAATGGCATTCGGTTTACCCACAGACTCCTTGGAAGTACAACTATTTCAGAAAATCAGAAGCAGTTTCTTGACACTAGCGATGCATGTGAAAGACAAATCATGGTGATCATCGAGGATATGGATGTGAGAAGCAGAGCCGAAGGTAGCGCGAAGCTGAACATGGAAGAATTTATGTTGGGAAATGTTTTGGATGTCATCATTTGCCAATCAATGCTCTCGCTGAGGGAAAAGAACTTGCAGCTCTTTCATGAGATTCCAGAAGAGATCAAATCACTATCTTTGGAAGGCGATCAAATCCGGCTTCAGTTGGTTTTGTCAGATTTCTGGCTCAATGTAGTGAATCATGCACCTTCCCCAAATGGATGGGTCGAAATAAAAATTTCACCTGGTCTAAAGTTAATACAGGACGACAACAATGATATCCGTCTCCAGATCAGAATGACACACCCTGGCCAAGGCCTTCCGGCGGTGCTCATCCAGGATATGTTCGAGGGTGGAAACAGATGGACGACACCAGAAGGGTTCGGGCTAAATCTGTCCCGGAAACTTCTGAATAGAATGAATGGTAAGGTGCAGTATGTTAGAGAGCACAATAAATGTTACTTTGTCGTTGACATCAAACTTAAGATGAAGAAAGAGAGGCAGAGGCTGCCTGTGTCTGAAGCTGATATGAGCACAACGACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GAF HATPase_c HisKA PAS PAS_2 PHY

Protein Analysis

798

Amino Acids

89.33

Weight (kDa)

5.42

Isoelectric Point (pI)

51.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PHY PF00360 77 - 250 8.2e-57 Phytochrome region
PAS PF00989 281 - 396 4.5e-26 PAS fold
PAS_4 PF08448 289 - 397 2.8e-09 PAS fold
PAS PF00989 412 - 531 7.5e-19 PAS fold
HisKA PF00512 554 - 616 3.2e-10 His Kinase A (phospho-acceptor) domain
HATPase_c PF02518 665 - 777 3.4e-11 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 3 cut(s) 833, 1003, 1856
AclWI GGATC 1 cut(s) 315
AcoI YGGCCR 2 cut(s) 1119, 2158
AcsI RAATTY 5 cut(s) 1078, 1214, 1593, 1874, 2085
AcuI CTGAAG 4 cut(s) 852, 1430, 1994, 2388
AfaI GTAC 5 cut(s) 338, 445, 780, 1451, 1744
AfiI CCNNNNNNNGG 5 cut(s) 488, 881, 1709, 2162, 2173
AflII CTTAAG 2 cut(s) 1664, 2330
AflIII ACRYGT 1 cut(s) 350
AgsI TTSAA 5 cut(s) 72, 194, 531, 662, 1016
AjnI CCWGG 3 cut(s) 2092, 2155, 2184
AjuI GAANNNNNNNTTGG 4 cut(s) 670, 702, 1347, 1379
Alw21I GWGCWC 3 cut(s) 2181, 2298, 2384
Alw26I GTCTC 5 cut(s) 700, 732, 854, 905, 2138
AlwI GGATC 1 cut(s) 315
AlwNI CAGNNNCTG 1 cut(s) 2356
Ama87I CYCGRG 2 cut(s) 634, 1350
AoxI GGCC 5 cut(s) 1119, 1242, 1617, 2158, 2164
ApeKI GCWGC 8 cut(s) 172, 329, 409, 566, 1322, 1612, 1945, 2356
ApoI RAATTY 5 cut(s) 1078, 1214, 1593, 1874, 2085
AseI ATTAAT 1 cut(s) 705
AspLEI GCGC 1 cut(s) 1856
AsuC2I CCSGG 1 cut(s) 2248
AsuHPI GGTGA 4 cut(s) 43, 1055, 1822, 2082
AsuII TTCGAA 2 cut(s) 770, 1658
AsuNHI GCTAGC 1 cut(s) 1538
AvaI CYCGRG 2 cut(s) 634, 1350
BalI TGGCCA 2 cut(s) 1121, 2160
BanII GRGCYC 1 cut(s) 17
BauI CACGAG 2 cut(s) 311, 1132
BbsI GAAGAC 1 cut(s) 1362
Bbv12I GWGCWC 3 cut(s) 2181, 2298, 2384
BbvCI CCTCAGC 1 cut(s) 1928
BbvI GCAGC 8 cut(s) 159, 316, 396, 578, 1334, 1624, 1957, 2343
BceAI ACGGC 1 cut(s) 579
BcgI CGANNNNNNTGC 2 cut(s) 955, 989
BciT130I CCWGG 3 cut(s) 2094, 2157, 2186
BclI TGATCA 1 cut(s) 1812
BcnI CCSGG 1 cut(s) 2248
BcoDI GTCTC 5 cut(s) 700, 732, 854, 905, 2138
BfaI CTAG 2 cut(s) 1539, 1782
BfrI CTTAAG 2 cut(s) 1664, 2330
BlpI GCTNAGC 1 cut(s) 591
BmcAI AGTACT 1 cut(s) 445
Bme1390I CCNGG 4 cut(s) 2094, 2157, 2186, 2248
BmeT110I CYCGRG 2 cut(s) 634, 1350
BmrFI CCNGG 4 cut(s) 2094, 2157, 2186, 2248
BmrI ACTGGG 1 cut(s) 497
BmsI GCATC 7 cut(s) 466, 604, 618, 781, 789, 1295, 1777
BmtI GCTAGC 1 cut(s) 1542
BmuI ACTGGG 1 cut(s) 497
BpiI GAAGAC 1 cut(s) 1362
BpmI CTGGAG 1 cut(s) 2120
Bpu10I CCTNAGC 1 cut(s) 1928
Bpu1102I GCTNAGC 1 cut(s) 591
Bpu14I TTCGAA 2 cut(s) 770, 1658
BpuMI CCSGG 1 cut(s) 2248
BsaAI YACGTR 1 cut(s) 1028
BsaI GGTCTC 2 cut(s) 700, 905
BsaJI CCNNGG 8 cut(s) 686, 831, 1326, 1453, 1620, 1735, 2155, 2161
BsaXI ACNNNNNCTCC 2 cut(s) 277, 307
Bsc4I CCNNNNNNNGG 5 cut(s) 488, 881, 1709, 2162, 2173
Bse118I RCCGGY 1 cut(s) 1615
Bse1I ACTGG 5 cut(s) 33, 469, 492, 769, 1345
BseBI CCWGG 3 cut(s) 2094, 2157, 2186
BseDI CCNNGG 8 cut(s) 686, 831, 1326, 1453, 1620, 1735, 2155, 2161
BseLI CCNNNNNNNGG 5 cut(s) 488, 881, 1709, 2162, 2173
BseMII CTCAG 9 cut(s) 204, 241, 431, 690, 786, 838, 921, 1323, 1919
BseNI ACTGG 5 cut(s) 33, 469, 492, 769, 1345
BseRI GAGGAG 2 cut(s) 600, 1061
BseXI GCAGC 8 cut(s) 159, 316, 396, 578, 1334, 1624, 1957, 2343
BsgI GTGCAG 1 cut(s) 2300
Bsh1236I CGCG 3 cut(s) 833, 1003, 1856
BshFI GGCC 5 cut(s) 1121, 1244, 1619, 2160, 2166
BsiHKAI GWGCWC 3 cut(s) 2181, 2298, 2384
BsiHKCI CYCGRG 2 cut(s) 634, 1350
BsiSI CCGG 4 cut(s) 1616, 2005, 2171, 2248
BslFI GGGAC 5 cut(s) 107, 278, 361, 955, 2230
BslI CCNNNNNNNGG 5 cut(s) 488, 881, 1709, 2162, 2173
BsmAI GTCTC 5 cut(s) 700, 732, 854, 905, 2138
BsmBI CGTCTC 1 cut(s) 2138
BsmFI GGGAC 5 cut(s) 107, 278, 361, 955, 2230
BsmI GAATGC 3 cut(s) 922, 1324, 1713
BsnI GGCC 5 cut(s) 1121, 1244, 1619, 2160, 2166
Bso31I GGTCTC 2 cut(s) 700, 905
BsoBI CYCGRG 2 cut(s) 634, 1350
Bsp119I TTCGAA 2 cut(s) 770, 1658
Bsp1286I GDGCHC 4 cut(s) 17, 2181, 2298, 2384
Bsp143I GATC 7 cut(s) 307, 638, 855, 1812, 1971, 1996, 2139
Bsp1720I GCTNAGC 1 cut(s) 591
Bsp19I CCATGG 1 cut(s) 1326
BspANI GGCC 5 cut(s) 1121, 1244, 1619, 2160, 2166
BspCNI CTCAG 9 cut(s) 205, 240, 432, 691, 787, 837, 922, 1322, 1920
BspFNI CGCG 3 cut(s) 833, 1003, 1856
BspHI TCATGA 1 cut(s) 1954
BspOI GCTAGC 1 cut(s) 1542
BspPI GGATC 1 cut(s) 315
BspT104I TTCGAA 2 cut(s) 770, 1658
BspTI CTTAAG 2 cut(s) 1664, 2330
BspTNI GGTCTC 2 cut(s) 700, 905
BsrFI RCCGGY 1 cut(s) 1615
BsrI ACTGG 5 cut(s) 33, 469, 492, 769, 1345
BssAI RCCGGY 1 cut(s) 1615
BssECI CCNNGG 8 cut(s) 686, 831, 1326, 1453, 1620, 1735, 2155, 2161
BssMI GATC 7 cut(s) 307, 638, 855, 1812, 1971, 1996, 2139
BssSI CACGAG 2 cut(s) 311, 1132
BssT1I CCWWGG 6 cut(s) 686, 1326, 1453, 1620, 1735, 2161
Bst2BI CACGAG 2 cut(s) 311, 1132
Bst2UI CCWGG 3 cut(s) 2094, 2157, 2186
Bst4CI ACNGT 1 cut(s) 620
Bst6I CTCTTC 2 cut(s) 138, 1962
BstAFI CTTAAG 2 cut(s) 1664, 2330
BstAPI GCANNNNNTGC 1 cut(s) 2356
BstBAI YACGTR 1 cut(s) 1028
BstBI TTCGAA 2 cut(s) 770, 1658
BstC8I GCNNGC 4 cut(s) 162, 1226, 1540, 1617
BstDSI CCRYGG 2 cut(s) 831, 1326
BstEII GGTNACC 1 cut(s) 467
BstENI CCTNNNNNAGG 1 cut(s) 2160
BstFNI CGCG 3 cut(s) 833, 1003, 1856
BstHHI GCGC 1 cut(s) 1856
BstKTI GATC 7 cut(s) 310, 641, 858, 1815, 1974, 1999, 2142
BstMAI GTCTC 5 cut(s) 700, 732, 854, 905, 2138
BstMBI GATC 7 cut(s) 307, 638, 855, 1812, 1971, 1996, 2139
BstMWI GCNNNNNNNGC 3 cut(s) 926, 1609, 2356
BstNI CCWGG 3 cut(s) 2094, 2157, 2186
BstNSI RCATGY 7 cut(s) 256, 354, 840, 1305, 1612, 1684, 1794
BstPI GGTNACC 1 cut(s) 467
BstSCI CCNGG 4 cut(s) 2092, 2155, 2184, 2246
BstSNI TACGTA 1 cut(s) 1028
BstUI CGCG 3 cut(s) 833, 1003, 1856
BstV1I GCAGC 8 cut(s) 159, 316, 396, 578, 1334, 1624, 1957, 2343
BstV2I GAAGAC 1 cut(s) 1362
BstX2I RGATCY 1 cut(s) 307
BstXI CCANNNNNNTGG 1 cut(s) 2070
BstYI RGATCY 1 cut(s) 307
BsuRI GGCC 5 cut(s) 1121, 1244, 1619, 2160, 2166
BtgI CCRYGG 2 cut(s) 831, 1326
BtgZI GCGATG 1 cut(s) 1800
BtsIMutI CAGTG 2 cut(s) 26, 1468
Cac8I GCNNGC 4 cut(s) 162, 1226, 1540, 1617
CaiI CAGNNNCTG 1 cut(s) 2356
CciI TCATGA 1 cut(s) 1954
CfoI GCGC 1 cut(s) 1856
Cfr10I RCCGGY 1 cut(s) 1615
Cfr42I CCGCGG 1 cut(s) 834
CsiI ACCWGGT 1 cut(s) 2092
Csp6I GTAC 5 cut(s) 337, 444, 779, 1450, 1743
CviQI GTAC 5 cut(s) 337, 444, 779, 1450, 1743
DpnI GATC 7 cut(s) 309, 640, 857, 1814, 1973, 1998, 2141
DpnII GATC 7 cut(s) 307, 638, 855, 1812, 1971, 1996, 2139
DraI TTTAAA 2 cut(s) 649, 1707
EaeI YGGCCR 2 cut(s) 1119, 2158
Eam1104I CTCTTC 2 cut(s) 138, 1962
EarI CTCTTC 2 cut(s) 138, 1962
EciI GGCGGA 1 cut(s) 473
Eco105I TACGTA 1 cut(s) 1028
Eco130I CCWWGG 6 cut(s) 686, 1326, 1453, 1620, 1735, 2161
Eco147I AGGCCT 1 cut(s) 2166
Eco24I GRGCYC 1 cut(s) 17
Eco31I GGTCTC 2 cut(s) 700, 905
Eco32I GATATC 2 cut(s) 754, 2128
Eco57I CTGAAG 4 cut(s) 852, 1430, 1994, 2388
Eco88I CYCGRG 2 cut(s) 634, 1350
Eco91I GGTNACC 1 cut(s) 467
EcoNI CCTNNNNNAGG 1 cut(s) 2160
EcoO65I GGTNACC 1 cut(s) 467
EcoRII CCWGG 3 cut(s) 2092, 2155, 2184
EcoRV GATATC 2 cut(s) 754, 2128
EcoT14I CCWWGG 6 cut(s) 686, 1326, 1453, 1620, 1735, 2161
EcoT22I ATGCAT 1 cut(s) 1792
EcoT38I GRGCYC 1 cut(s) 17
ErhI CCWWGG 6 cut(s) 686, 1326, 1453, 1620, 1735, 2161
Esp3I CGTCTC 1 cut(s) 2138
FalI AAGNNNNNCTT 2 cut(s) 670, 702
FaqI GGGAC 5 cut(s) 107, 278, 361, 955, 2230
FauI CCCGC 2 cut(s) 122, 338
FbaI TGATCA 1 cut(s) 1812
FriOI GRGCYC 1 cut(s) 17
FspBI CTAG 2 cut(s) 1539, 1782
GlaI GCGC 1 cut(s) 1855
GsuI CTGGAG 1 cut(s) 2120
HaeIII GGCC 5 cut(s) 1121, 1244, 1619, 2160, 2166
HapII CCGG 4 cut(s) 1616, 2005, 2171, 2248
HhaI GCGC 1 cut(s) 1856
Hin6I GCGC 1 cut(s) 1854
HinP1I GCGC 1 cut(s) 1854
HincII GTYRAC 4 cut(s) 936, 979, 1406, 2320
HindII GTYRAC 4 cut(s) 936, 979, 1406, 2320
HindIII AAGCTT 2 cut(s) 77, 651
HpaII CCGG 4 cut(s) 1616, 2005, 2171, 2248
HphI GGTGA 4 cut(s) 43, 1055, 1822, 2082
Hpy166II GTNNAC 5 cut(s) 936, 979, 1406, 1722, 2320
Hpy8I GTNNAC 5 cut(s) 936, 979, 1406, 1722, 2320
HpyAV CCTTC 9 cut(s) 269, 766, 1405, 1619, 1841, 1985, 2067, 2177, 2219
HpyCH4III ACNGT 1 cut(s) 620
HpyCH4IV ACGT 2 cut(s) 1027, 1359
HpyF10VI GCNNNNNNNGC 3 cut(s) 926, 1609, 2356
HpySE526I ACGT 2 cut(s) 1027, 1359
HspAI GCGC 1 cut(s) 1854
KroI GCCGGC 1 cut(s) 1615
KroNI GCCGGC 1 cut(s) 1617
Ksp22I TGATCA 1 cut(s) 1812
KspI CCGCGG 1 cut(s) 834
Kzo9I GATC 7 cut(s) 307, 638, 855, 1812, 1971, 1996, 2139
LmnI GCTCC 4 cut(s) 187, 261, 326, 587
Lsp1109I GCAGC 8 cut(s) 159, 316, 396, 578, 1334, 1624, 1957, 2343
LweI GCATC 7 cut(s) 466, 604, 618, 781, 789, 1295, 1777
MabI ACCWGGT 1 cut(s) 2092
MaeI CTAG 2 cut(s) 1539, 1782
MaeII ACGT 2 cut(s) 1027, 1359
MaeIII GTNAC 8 cut(s) 248, 283, 320, 367, 467, 1035, 1604, 2306
MalI GATC 7 cut(s) 309, 640, 857, 1814, 1973, 1998, 2141
MboI GATC 7 cut(s) 307, 638, 855, 1812, 1971, 1996, 2139
MboII GAAGA 5 cut(s) 125, 1367, 1883, 1979, 2350
MfeI CAATTG 1 cut(s) 194
MflI RGATCY 1 cut(s) 307
MhlI GDGCHC 4 cut(s) 17, 2181, 2298, 2384
MlsI TGGCCA 2 cut(s) 1121, 2160
MluNI TGGCCA 2 cut(s) 1121, 2160
MlyI GAGTC 8 cut(s) 260, 531, 734, 992, 1150, 1264, 1342, 1725
MmeI TCCRAC 2 cut(s) 398, 1325
Mox20I TGGCCA 2 cut(s) 1121, 2160
Mph1103I ATGCAT 1 cut(s) 1792
MroNI GCCGGC 1 cut(s) 1615
MscI TGGCCA 2 cut(s) 1121, 2160
Msp20I TGGCCA 2 cut(s) 1121, 2160
MspA1I CMGCKG 2 cut(s) 569, 833
MspCI CTTAAG 2 cut(s) 1664, 2330
MspI CCGG 4 cut(s) 1616, 2005, 2171, 2248
MspR9I CCNGG 4 cut(s) 2094, 2157, 2186, 2248
MunI CAATTG 1 cut(s) 194
Mva1269I GAATGC 3 cut(s) 922, 1324, 1713
MvaI CCWGG 3 cut(s) 2094, 2157, 2186
MvnI CGCG 3 cut(s) 833, 1003, 1856
MwoI GCNNNNNNNGC 3 cut(s) 926, 1609, 2356
NaeI GCCGGC 1 cut(s) 1617
NciI CCSGG 1 cut(s) 2248
NcoI CCATGG 1 cut(s) 1326
NdeII GATC 7 cut(s) 307, 638, 855, 1812, 1971, 1996, 2139
NgoMIV GCCGGC 1 cut(s) 1615
NheI GCTAGC 1 cut(s) 1538
NmuCI GTSAC 4 cut(s) 248, 283, 320, 1604
NsiI ATGCAT 1 cut(s) 1792
NspI RCATGY 7 cut(s) 256, 354, 840, 1305, 1612, 1684, 1794
NspV TTCGAA 2 cut(s) 770, 1658
PaeR7I CTCGAG 1 cut(s) 1350
PagI TCATGA 1 cut(s) 1954
PceI AGGCCT 1 cut(s) 2166
PciI ACATGT 1 cut(s) 350
PctI GAATGC 3 cut(s) 922, 1324, 1713
PdiI GCCGGC 1 cut(s) 1617
PfeI GAWTC 9 cut(s) 68, 223, 380, 428, 890, 1270, 1458, 1960, 2047
PfoI TCCNGGA 2 cut(s) 2184, 2246
PleI GAGTC 8 cut(s) 260, 530, 734, 992, 1149, 1263, 1342, 1725
PpsI GAGTC 8 cut(s) 260, 530, 734, 992, 1149, 1263, 1342, 1725
Ppu21I YACGTR 1 cut(s) 1028
PscI ACATGT 1 cut(s) 350
PshBI ATTAAT 1 cut(s) 705
Psp6I CCWGG 3 cut(s) 2092, 2155, 2184
PspEI GGTNACC 1 cut(s) 467
PspGI CCWGG 3 cut(s) 2092, 2155, 2184
PstNI CAGNNNCTG 1 cut(s) 2356
PsuI RGATCY 1 cut(s) 307
RsaI GTAC 5 cut(s) 338, 445, 780, 1451, 1744
RsaNI GTAC 5 cut(s) 337, 444, 779, 1450, 1743
SacII CCGCGG 1 cut(s) 834
Sau3AI GATC 7 cut(s) 307, 638, 855, 1812, 1971, 1996, 2139
ScaI AGTACT 1 cut(s) 445
SchI GAGTC 8 cut(s) 260, 531, 734, 992, 1150, 1264, 1342, 1725
ScrFI CCNGG 4 cut(s) 2094, 2157, 2186, 2248
SduI GDGCHC 4 cut(s) 17, 2181, 2298, 2384
SexAI ACCWGGT 1 cut(s) 2092
SfaNI GCATC 7 cut(s) 466, 604, 618, 781, 789, 1295, 1777
Sfr274I CTCGAG 1 cut(s) 1350
Sfr303I CCGCGG 1 cut(s) 834
SfuI TTCGAA 2 cut(s) 770, 1658
SgrBI CCGCGG 1 cut(s) 834
SlaI CTCGAG 1 cut(s) 1350
SmlI CTYRAG 3 cut(s) 1350, 1664, 2330
SmoI CTYRAG 3 cut(s) 1350, 1664, 2330
SnaBI TACGTA 1 cut(s) 1028
SseBI AGGCCT 1 cut(s) 2166
SspMI CTAG 2 cut(s) 1539, 1782
StuI AGGCCT 1 cut(s) 2166
StyD4I CCNGG 4 cut(s) 2092, 2155, 2184, 2246
StyI CCWWGG 6 cut(s) 686, 1326, 1453, 1620, 1735, 2161
TaaI ACNGT 1 cut(s) 620
TaiI ACGT 2 cut(s) 1030, 1362
TaqI TCGA 9 cut(s) 17, 756, 770, 858, 1351, 1658, 1818, 2076, 2196
TatI WGTACW 4 cut(s) 336, 443, 778, 1742
TauI GCSGC 2 cut(s) 836, 1687
TfiI GAWTC 9 cut(s) 68, 223, 380, 428, 890, 1270, 1458, 1960, 2047
TscAI CASTG 2 cut(s) 33, 1468
TseFI GTSAC 4 cut(s) 248, 283, 320, 1604
TseI GCWGC 8 cut(s) 172, 329, 409, 566, 1322, 1612, 1945, 2356
Tsp45I GTSAC 4 cut(s) 248, 283, 320, 1604
TspDTI ATGAA 6 cut(s) 834, 1207, 1709, 1943, 2282, 2351
TspGWI ACGGA 3 cut(s) 339, 1476, 2120
TspRI CASTG 2 cut(s) 33, 1468
Vha464I CTTAAG 2 cut(s) 1664, 2330
VspI ATTAAT 1 cut(s) 705
XagI CCTNNNNNAGG 1 cut(s) 2160
XapI RAATTY 5 cut(s) 1078, 1214, 1593, 1874, 2085
XceI RCATGY 7 cut(s) 256, 354, 840, 1305, 1612, 1684, 1794
XcmI CCANNNNNNNNNTGG 2 cut(s) 1460, 1733
XhoI CTCGAG 1 cut(s) 1350
XspI CTAG 2 cut(s) 1539, 1782
ZrmI AGTACT 1 cut(s) 445
Zsp2I ATGCAT 1 cut(s) 1792
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.