pycom111g04290

vacuolar amino acid transporter

Basic Information

Type: gene
Biological Identity
pyrus_communis
SuperScaffold_111
Physical Location & Seq
Forward (+)
2605314 .. 2607202
1889 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom111g04290.2

Sequence Viewer

Length: 1305 bp
ATGGATGCTGATTCTTCAGAAAAGTCATCATCCTTAATCTTGCCTCTAATCCTTGGTGAGGAGCAACATGAGCACGTTGGAAGCAAGGTAGAAGAAGAACTAGAGTCGAGCTTTCATCACCAAACTACAGCCACAACCTCCTTCCTCAAAACCTGTTTTAATGGACTCAATGCACTCTCAGGAGTAGGGATACTGTCAGTTCCTTATGCACTAGCATCAGGAGGATGGCTAAGCTTGATCTTCCTTTTCTTAATCGCGGCTTCGGCCTTCTACTCGGGCTTGTTAATCCAGAGATGCATGGATGTGGATTCTGATATCAGAACTTATCCGGACATAGGTGAGCGCGCATTCGGGAAGAAGGGAAGAATTCTGCTGTCGATTGTCATGAATGTAGAACTCTACTTCGTTGCAACAGGGTTCCTAATTTTGGAAGGAGATAACTTACACAACTTATTTCCCGGCGTGGAATTAAAAGTGGCTGGATTAAGAATTGGCGGAGAACAGTGCTTCATAATTGTTGTTGCCCTCATTATTCTGCCAACAGTTTGGTTAGATAACCTGAGCCTTCTTTCTTATGTGTCTGCAAGTGGAGTTTTAGCATCTGCCATCATCCTCGGTTCGATTTTGTGGACTGGTGCTTTTGAAGGAATCGGATTTCATCAAGAGGGCACACCACTGAAGTGGAATGGAATCCCTACCGCTGTTAGCTTGTATGCCTTTTGTTACTGCGCACATCCGGTGTTCCCTACCCTCTACACTTCTATGAAAAACAAACGTCAGTTCTCCAATGTTCTTCTCCTATGCTTCATCTTGTGCACCATCTGTTATGCATCAATGGCAGTTTTCGGGTACCTAATGTTTGGATCTACGGTTCAATCACAGATAACATTAAATCTCCCAACTCACAAAATTAGCTCAAAAATCGCGATATACACCACGCTGGTCAATCCGATATCCAAATATGCTTTGATGGTTACACCAGTTGTAAATGCTGCAAAGAAGATGTTTCCGAGTCACTTCAACAAAAGACTCATCGGCATGTTAGCCAGCACCACCCTGGTGATCAGCACCGTTGTAGTAGCTTTGGCTATACCATTTTTTGCTTGTCTCATGTCACTAGTCGGAGCTTTTCTGAGTGTAACAGCATCGATTATATTGCCGTGCTTTTGCTACCTTAAAATTTCAGGTATTTATCGACGCCTCGGATGTGAGATGTTGATTATAGGGCTTATATTAGTACTGAGTGCTGCAGTTGTTGTATTTGGCACTTACACATCTCTAGGAGAAATAATAGAGCACTTGTAA

Protein Analysis

435

Amino Acids

47.1

Weight (kDa)

6.78

Isoelectric Point (pI)

36.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 730
Acc65I GGTACC 1 cut(s) 849
AccB1I GGYRCC 1 cut(s) 849
AccII CGCG 3 cut(s) 257, 345, 926
AccIII TCCGGA 1 cut(s) 328
AciI CCGC 3 cut(s) 257, 495, 699
AclWI GGATC 1 cut(s) 871
AcsI RAATTY 2 cut(s) 366, 1179
AcuI CTGAAG 1 cut(s) 698
AcyI GRCGYC 1 cut(s) 1198
AfaI GTAC 2 cut(s) 851, 1239
AfiI CCNNNNNNNGG 3 cut(s) 58, 335, 427
AgsI TTSAA 3 cut(s) 644, 875, 1021
AhlI ACTAGT 1 cut(s) 1117
AjnI CCWGG 1 cut(s) 1056
AleI CACNNNNGTG 2 cut(s) 679, 1058
AloI GAACNNNNNNTCC 2 cut(s) 855, 887
AluBI AGCT 6 cut(s) 111, 234, 708, 915, 1082, 1127
AluI AGCT 6 cut(s) 111, 234, 708, 915, 1082, 1127
Alw21I GWGCWC 3 cut(s) 75, 818, 1299
Alw26I GTCTC 1 cut(s) 1112
Alw44I GTGCAC 1 cut(s) 814
AlwI GGATC 1 cut(s) 871
Ama87I CYCGRG 1 cut(s) 274
Aor13HI TCCGGA 1 cut(s) 328
AoxI GGCC 1 cut(s) 264
ApaLI GTGCAC 1 cut(s) 814
ApeKI GCWGC 2 cut(s) 992, 1247
ApoI RAATTY 2 cut(s) 366, 1179
Asp718I GGTACC 1 cut(s) 849
AspLEI GCGC 3 cut(s) 345, 347, 731
AsuC2I CCSGG 1 cut(s) 459
AsuHPI GGTGA 4 cut(s) 68, 110, 350, 1072
AvaI CYCGRG 1 cut(s) 274
BaeGI GKGCMC 2 cut(s) 671, 818
BanI GGYRCC 1 cut(s) 849
Bbv12I GWGCWC 3 cut(s) 75, 818, 1299
BbvI GCAGC 2 cut(s) 979, 1234
BccI CCATC 4 cut(s) 219, 614, 827, 964
BceAI ACGGC 1 cut(s) 1144
BcgI CGANNNNNNTGC 2 cut(s) 1138, 1172
BciT130I CCWGG 1 cut(s) 1058
BciVI GTATCC 1 cut(s) 183
BclI TGATCA 1 cut(s) 1062
BcnI CCSGG 1 cut(s) 459
BcoDI GTCTC 1 cut(s) 1112
BcuI ACTAGT 1 cut(s) 1117
BfaI CTAG 4 cut(s) 101, 212, 1118, 1280
BfmI CTRYAG 2 cut(s) 126, 1248
BfuI GTATCC 1 cut(s) 183
BisI GCNGC 3 cut(s) 258, 993, 1248
BlpI GCTNAGC 1 cut(s) 230
BlsI GCNGC 3 cut(s) 259, 994, 1249
BmcAI AGTACT 1 cut(s) 1239
Bme1390I CCNGG 2 cut(s) 459, 1058
BmeT110I CYCGRG 1 cut(s) 274
BmiI GGNNCC 2 cut(s) 419, 851
BmrFI CCNGG 2 cut(s) 459, 1058
BmsI GCATC 5 cut(s) 224, 284, 608, 839, 1154
Bpu10I CCTNAGC 1 cut(s) 560
Bpu1102I GCTNAGC 1 cut(s) 230
BpuMI CCSGG 1 cut(s) 459
Bsa29I ATCGAT 1 cut(s) 1148
BsaHI GRCGYC 1 cut(s) 1198
BsaJI CCNNGG 4 cut(s) 52, 613, 1056, 1201
BsaWI WCCGGW 2 cut(s) 328, 736
Bsc4I CCNNNNNNNGG 3 cut(s) 58, 335, 427
Bse1I ACTGG 2 cut(s) 637, 980
BseAI TCCGGA 1 cut(s) 328
BseBI CCWGG 1 cut(s) 1058
BseCI ATCGAT 1 cut(s) 1148
BseDI CCNNGG 4 cut(s) 52, 613, 1056, 1201
BseGI GGATG 7 cut(s) 10, 29, 230, 307, 609, 733, 1211
BseLI CCNNNNNNNGG 3 cut(s) 58, 335, 427
BseMII CTCAG 4 cut(s) 192, 551, 1124, 1232
BseNI ACTGG 2 cut(s) 637, 980
BsePI GCGCGC 1 cut(s) 343
BseRI GAGGAG 1 cut(s) 74
BseSI GKGCMC 2 cut(s) 671, 818
BseXI GCAGC 2 cut(s) 979, 1234
Bsh1236I CGCG 3 cut(s) 257, 345, 926
BshFI GGCC 1 cut(s) 266
BshNI GGYRCC 1 cut(s) 849
BshVI ATCGAT 1 cut(s) 1148
BsiHKAI GWGCWC 3 cut(s) 75, 818, 1299
BsiHKCI CYCGRG 1 cut(s) 274
BsiSI CCGG 3 cut(s) 329, 459, 737
BslI CCNNNNNNNGG 3 cut(s) 58, 335, 427
BsmAI GTCTC 1 cut(s) 1112
BsmI GAATGC 1 cut(s) 347
BsnI GGCC 1 cut(s) 266
BsoBI CYCGRG 1 cut(s) 274
Bsp1286I GDGCHC 4 cut(s) 75, 671, 818, 1299
Bsp13I TCCGGA 1 cut(s) 328
Bsp143I GATC 3 cut(s) 237, 863, 1062
Bsp1720I GCTNAGC 1 cut(s) 230
Bsp68I TCGCGA 1 cut(s) 926
BspACI CCGC 3 cut(s) 257, 495, 699
BspANI GGCC 1 cut(s) 266
BspCNI CTCAG 4 cut(s) 191, 552, 1125, 1233
BspDI ATCGAT 1 cut(s) 1148
BspEI TCCGGA 1 cut(s) 328
BspFNI CGCG 3 cut(s) 257, 345, 926
BspHI TCATGA 1 cut(s) 384
BspLI GGNNCC 2 cut(s) 419, 851
BspMAI CTGCAG 1 cut(s) 1252
BspPI GGATC 1 cut(s) 871
BspT107I GGYRCC 1 cut(s) 849
BsrI ACTGG 2 cut(s) 637, 980
BssECI CCNNGG 4 cut(s) 52, 613, 1056, 1201
BssHII GCGCGC 1 cut(s) 343
BssMI GATC 3 cut(s) 237, 863, 1062
BssNI GRCGYC 1 cut(s) 1198
BssT1I CCWWGG 1 cut(s) 52
Bst2UI CCWGG 1 cut(s) 1058
Bst4CI ACNGT 5 cut(s) 195, 504, 544, 871, 1072
BstACI GRCGYC 1 cut(s) 1198
BstC8I GCNNGC 2 cut(s) 345, 1048
BstDEI CTNAG 5 cut(s) 178, 230, 560, 1133, 1241
BstENI CCTNNNNNAGG 1 cut(s) 56
BstF5I GGATG 7 cut(s) 10, 29, 230, 307, 609, 733, 1211
BstFNI CGCG 3 cut(s) 257, 345, 926
BstHHI GCGC 3 cut(s) 345, 347, 731
BstKTI GATC 3 cut(s) 240, 866, 1065
BstMAI GTCTC 1 cut(s) 1112
BstMBI GATC 3 cut(s) 237, 863, 1062
BstMWI GCNNNNNNNGC 3 cut(s) 70, 263, 836
BstNI CCWGG 1 cut(s) 1058
BstNSI RCATGY 1 cut(s) 1042
BstSCI CCNGG 2 cut(s) 457, 1056
BstSFI CTRYAG 2 cut(s) 126, 1248
BstSLI GKGCMC 2 cut(s) 671, 818
BstUI CGCG 3 cut(s) 257, 345, 926
BstV1I GCAGC 2 cut(s) 979, 1234
BstX2I RGATCY 1 cut(s) 863
BstXI CCANNNNNNTGG 2 cut(s) 546, 681
BstYI RGATCY 1 cut(s) 863
Bsu15I ATCGAT 1 cut(s) 1148
BsuI GTATCC 1 cut(s) 183
BsuRI GGCC 1 cut(s) 266
BsuTUI ATCGAT 1 cut(s) 1148
BtsCI GGATG 7 cut(s) 10, 29, 230, 307, 609, 733, 1211
BtsIMutI CAGTG 2 cut(s) 509, 674
BtuMI TCGCGA 1 cut(s) 926
Cac8I GCNNGC 2 cut(s) 345, 1048
CciI TCATGA 1 cut(s) 384
CfoI GCGC 3 cut(s) 345, 347, 731
ClaI ATCGAT 1 cut(s) 1148
CseI GACGC 1 cut(s) 1206
Csp6I GTAC 2 cut(s) 850, 1238
CviAII CATG 5 cut(s) 68, 298, 385, 1039, 1111
CviQI GTAC 2 cut(s) 850, 1238
DdeI CTNAG 5 cut(s) 178, 230, 560, 1133, 1241
DpnI GATC 3 cut(s) 239, 865, 1064
DpnII GATC 3 cut(s) 237, 863, 1062
EciI GGCGGA 1 cut(s) 510
Eco130I CCWWGG 1 cut(s) 52
Eco32I GATATC 2 cut(s) 316, 954
Eco57I CTGAAG 1 cut(s) 698
Eco88I CYCGRG 1 cut(s) 274
EcoNI CCTNNNNNAGG 1 cut(s) 56
EcoRI GAATTC 1 cut(s) 366
EcoRII CCWGG 1 cut(s) 1056
EcoRV GATATC 2 cut(s) 316, 954
EcoT14I CCWWGG 1 cut(s) 52
EcoT22I ATGCAT 2 cut(s) 299, 832
ErhI CCWWGG 1 cut(s) 52
FaeI CATG 5 cut(s) 71, 301, 388, 1042, 1114
FatI CATG 5 cut(s) 67, 297, 384, 1038, 1110
FbaI TGATCA 1 cut(s) 1062
Fnu4HI GCNGC 3 cut(s) 258, 993, 1248
FokI GGATG 7 cut(s) 16, 17, 237, 314, 596, 720, 1218
Fsp4HI GCNGC 3 cut(s) 258, 993, 1248
FspBI CTAG 4 cut(s) 101, 212, 1118, 1280
FspI TGCGCA 1 cut(s) 730
GlaI GCGC 3 cut(s) 344, 346, 730
GluI GCNGC 3 cut(s) 258, 993, 1248
HaeIII GGCC 1 cut(s) 266
HapII CCGG 3 cut(s) 329, 459, 737
HgaI GACGC 1 cut(s) 1206
HhaI GCGC 3 cut(s) 345, 347, 731
Hin1I GRCGYC 1 cut(s) 1198
Hin1II CATG 5 cut(s) 71, 301, 388, 1042, 1114
Hin6I GCGC 3 cut(s) 343, 345, 729
HinP1I GCGC 3 cut(s) 343, 345, 729
HindIII AAGCTT 1 cut(s) 232
HinfI GANTC 8 cut(s) 11, 104, 165, 308, 648, 690, 1012, 1029
HpaII CCGG 3 cut(s) 329, 459, 737
HphI GGTGA 4 cut(s) 68, 110, 350, 1072
Hpy166II GTNNAC 2 cut(s) 630, 816
Hpy188I TCNGA 9 cut(s) 19, 313, 320, 653, 951, 1011, 1124, 1134, 1205
Hpy188III TCNNGA 8 cut(s) 180, 219, 289, 329, 352, 385, 662, 925
Hpy8I GTNNAC 2 cut(s) 630, 816
Hpy99I CGWCG 1 cut(s) 1200
HpyAV CCTTC 6 cut(s) 151, 277, 352, 425, 575, 638
HpyCH4III ACNGT 5 cut(s) 195, 504, 544, 871, 1072
HpyCH4IV ACGT 2 cut(s) 75, 775
HpyCH4V TGCA 9 cut(s) 173, 209, 297, 410, 584, 816, 830, 995, 1250
HpyF10VI GCNNNNNNNGC 3 cut(s) 70, 263, 836
HpyF3I CTNAG 5 cut(s) 178, 230, 560, 1133, 1241
HpySE526I ACGT 2 cut(s) 75, 775
Hsp92I GRCGYC 1 cut(s) 1198
Hsp92II CATG 5 cut(s) 71, 301, 388, 1042, 1114
HspAI GCGC 3 cut(s) 343, 345, 729
Kpn2I TCCGGA 1 cut(s) 328
KpnI GGTACC 1 cut(s) 853
Ksp22I TGATCA 1 cut(s) 1062
Kzo9I GATC 3 cut(s) 237, 863, 1062
LmnI GCTCC 2 cut(s) 61, 1124
Lsp1109I GCAGC 2 cut(s) 979, 1234
LweI GCATC 5 cut(s) 224, 284, 608, 839, 1154
MaeI CTAG 4 cut(s) 101, 212, 1118, 1280
MaeII ACGT 2 cut(s) 75, 775
MaeIII GTNAC 5 cut(s) 722, 973, 1013, 1113, 1138
MalI GATC 3 cut(s) 239, 865, 1064
MboI GATC 3 cut(s) 237, 863, 1062
MboII GAAGA 8 cut(s) 6, 104, 107, 232, 367, 375, 785, 1012
MflI RGATCY 1 cut(s) 863
MhlI GDGCHC 4 cut(s) 75, 671, 818, 1299
MluCI AATT 7 cut(s) 366, 423, 467, 489, 513, 909, 1179
MlyI GAGTC 4 cut(s) 113, 159, 1021, 1023
MmeI TCCRAC 2 cut(s) 58, 1102
Mph1103I ATGCAT 2 cut(s) 299, 832
MroI TCCGGA 1 cut(s) 328
MseI TTAA 8 cut(s) 35, 159, 251, 284, 470, 485, 890, 1176
MslI CAYNNNNRTG 5 cut(s) 302, 679, 761, 1037, 1058
MspA1I CMGCKG 1 cut(s) 701
MspI CCGG 3 cut(s) 329, 459, 737
MspR9I CCNGG 2 cut(s) 459, 1058
Mva1269I GAATGC 1 cut(s) 347
MvaI CCWGG 1 cut(s) 1058
MvnI CGCG 3 cut(s) 257, 345, 926
MwoI GCNNNNNNNGC 3 cut(s) 70, 263, 836
NciI CCSGG 1 cut(s) 459
NdeII GATC 3 cut(s) 237, 863, 1062
NlaIII CATG 5 cut(s) 71, 301, 388, 1042, 1114
NlaIV GGNNCC 2 cut(s) 419, 851
NmuCI GTSAC 2 cut(s) 1013, 1113
NruI TCGCGA 1 cut(s) 926
NsbI TGCGCA 1 cut(s) 730
NsiI ATGCAT 2 cut(s) 299, 832
NspI RCATGY 1 cut(s) 1042
OliI CACNNNNGTG 2 cut(s) 679, 1058
PagI TCATGA 1 cut(s) 384
PauI GCGCGC 1 cut(s) 343
PctI GAATGC 1 cut(s) 347
PfeI GAWTC 4 cut(s) 11, 308, 648, 690
PkrI GCNGC 3 cut(s) 259, 994, 1249
PleI GAGTC 4 cut(s) 112, 159, 1020, 1023
PpsI GAGTC 4 cut(s) 112, 159, 1020, 1023
Psp6I CCWGG 1 cut(s) 1056
PspGI CCWGG 1 cut(s) 1056
PspN4I GGNNCC 2 cut(s) 419, 851
PstI CTGCAG 1 cut(s) 1252
PsuI RGATCY 1 cut(s) 863
PteI GCGCGC 1 cut(s) 343
RruI TCGCGA 1 cut(s) 926
RsaI GTAC 2 cut(s) 851, 1239
RsaNI GTAC 2 cut(s) 850, 1238
RseI CAYNNNNRTG 5 cut(s) 302, 679, 761, 1037, 1058
SaqAI TTAA 8 cut(s) 35, 159, 251, 284, 470, 485, 890, 1176
SatI GCNGC 3 cut(s) 258, 993, 1248
Sau3AI GATC 3 cut(s) 237, 863, 1062
ScaI AGTACT 1 cut(s) 1239
SchI GAGTC 4 cut(s) 113, 159, 1021, 1023
ScrFI CCNGG 2 cut(s) 459, 1058
SduI GDGCHC 4 cut(s) 75, 671, 818, 1299
SfaNI GCATC 5 cut(s) 224, 284, 608, 839, 1154
SfcI CTRYAG 2 cut(s) 126, 1248
SmiMI CAYNNNNRTG 5 cut(s) 302, 679, 761, 1037, 1058
SpeI ACTAGT 1 cut(s) 1117
Sse9I AATT 7 cut(s) 366, 423, 467, 489, 513, 909, 1179
SsiI CCGC 3 cut(s) 257, 495, 699
SspMI CTAG 4 cut(s) 101, 212, 1118, 1280
StyD4I CCNGG 2 cut(s) 457, 1056
StyI CCWWGG 1 cut(s) 52
TaaI ACNGT 5 cut(s) 195, 504, 544, 871, 1072
TaiI ACGT 2 cut(s) 78, 778
TaqI TCGA 5 cut(s) 107, 377, 620, 1148, 1195
TasI AATT 7 cut(s) 366, 423, 467, 489, 513, 909, 1179
TatI WGTACW 1 cut(s) 1237
TauI GCSGC 1 cut(s) 260
TfiI GAWTC 4 cut(s) 11, 308, 648, 690
Tru1I TTAA 8 cut(s) 35, 159, 251, 284, 470, 485, 890, 1176
Tru9I TTAA 8 cut(s) 35, 159, 251, 284, 470, 485, 890, 1176
TscAI CASTG 2 cut(s) 509, 681
TseFI GTSAC 2 cut(s) 1013, 1113
TseI GCWGC 2 cut(s) 992, 1247
Tsp45I GTSAC 2 cut(s) 1013, 1113
TspDTI ATGAA 6 cut(s) 104, 401, 499, 647, 779, 796
TspRI CASTG 2 cut(s) 509, 681
VneI GTGCAC 1 cut(s) 814
XagI CCTNNNNNAGG 1 cut(s) 56
XapI RAATTY 2 cut(s) 366, 1179
XceI RCATGY 1 cut(s) 1042
XcmI CCANNNNNNNNNTGG 1 cut(s) 1054
XspI CTAG 4 cut(s) 101, 212, 1118, 1280
ZrmI AGTACT 1 cut(s) 1239
Zsp2I ATGCAT 2 cut(s) 299, 832
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.