Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0004035

Physical Location & Seq

Genomic Coordinates Reverse (-)

66315115 .. 66317940

Gene Structure 2826 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0533600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1203 bp

ATGAATCGCTGGACTCGACTCTACTCGCTCACTTCTGCCCGTAACGCCCTTGCTTTTTTTGCTCCTCGATCGCGAAAAGCACAATTCTTGACCCTACGAAACCGAAGATTTACGGCATCTGCCACCGCCGGCGGTCACGACCGGCTACGGCGCGCGATGGACCCGGAATCATCGACCGTGCCCGACCCGAATTCGGCCGAGGATTTCGTCCACGTCGAGAATTCCCTGTCGGATAGCATCGTCAATGTGGAGGTGCCTAGAGAGGAGGAGGACGACGGCGACGTCGTTTCGACCAGCGCTGCCGCGGCGGAGGAGGAGGACGACGACGACCGGGGGAGGAAGGTCCTCCCGGAGGATCTGTCCCGGAGCGTGGTGGTGCTGACGTGTGAGTCCTCCGCCGATAGCGGCGTTTGCGACGTGCACCTCGTCGGAACGGCGCATGTTTCGGTGGAATCATGCAGAGAAGTCGAAGCAGTGATAAGTTTTTTGAAACCAGAGGTTGTTTTCTTGGAGTTATGCTCCAGCAGAGTAGCGGTACTTAGTCCTCAGAACTTGAAGGTTCCTACAGCGAGAGAAATGATAGATATGTGGAAGAAGAATCACAATGTTTTTGGAATTGTTTACAGCTGGTTCCTTGCCAAGGTTGCAAGTAAGCTTGAGGTGTTTCCTGGTGCTGAGTTTCGTGTAGCATATGACGAAGCAATGAAGTATGGGGGTAAGGTGGTACTTGGTGATCGTCCAGTGCAGATTACTTTGCGAAGGACATGGGCAAAAATGCCACTTTGGCATAAGATAAAACTAATCTACTCCATACTCTTTCAAGCGGTCTTTTTACCAGATCCCGAAGATCTTAATAAAATGCTAAAGGAAATGGATGATGTTGACATGCTGACCCTTGTGATTCAAGAGATGAGTAAGGAGTTCCCAACTCTAATGGAAACACTTGTACATGAACGAGATCAGTACATGTCGTCCACATTACTAAGAACTGCCCGGGAGCATAATTCAGTAGTTGCAGTGGTAGGGAAGGGGCACCTCCGAGGAATTAATAAGCACTGGAAGCAGCCTGTTGTGGTGACGGATCTTATGGAAATTCCTTCACAAAAGACCGGTATTTCCACAGTCAAAGTTCTTAAATCTTTTGGTGTAGTTGTTGCTGGGGCCGCCATAATATCTGGAATATATCTTGCATCTAAGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003333 GO:0003674 GO:0005215 GO:0005342 GO:0006810 GO:0006811 GO:0006820 GO:0006865 GO:0008150 GO:0008509 GO:0008514 GO:0015075 GO:0015171 GO:0015318 GO:0015711 GO:0015849 GO:0022857 GO:0034220 GO:0046942 GO:0046943 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0098656 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

ko04721 ko04723 ko04727 ko05032 ko05033 map04721 map04723 map04727 map05032 map05033

Pfam Domains

Protein Families

Aa_trans

Protein Analysis

400

Amino Acids

44.68

Weight (kDa)

6.24

Isoelectric Point (pI)

45.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TraB_PrgY_gumN	PF01963	139 - 355	2.6e-22	TraB/PrgY/gumN family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004035)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G28960 AT3G28960 AT3G28960 AT3G28960 AT3G28960
fragaria_vesca	FvH4_6g48490 FvH4_6g48490 FvH4_6g48490
malus_domestica	MD00G1130600.v1.1 MD09G1051600.v1.1 MD17G1243600.v1.1
prunus_persica	Prupe.3G152900_v2.0.a1 Prupe.3G153500_v2.0.a1 Prupe.3G157700_v2.0.a1 Prupe.3G267100_v2.0.a1 Prupe.3G267100_v2.0.a1 Prupe.3G267100_v2.0.a1 Prupe.3G267100_v2.0.a1 Prupe.3G267100_v2.0.a1 Prupe.3G267100_v2.0.a1
pyrus_communis	pycom111g04290 pycom17g04650 pycom17g04680 pycom17g24620
rosa_chinensis	RchiOBHm_Chr2g0168381
rosa_laevigata	RLG00000021773
rosa_roxburghii	Rroxscaffold_2G00083100
rosa_rugosa	Rorug02G0533400.1 Rorug02G0533500.1 Rorug02G0533600
rosa_samantha	Rh2AG602700 Rh2BG615900
rosa_wichuraiana	Rw2G050010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	281, 388
AatII	GACGTC	1 cut(s)	285
AccB1I	GGYRCC	2 cut(s)	253, 1032
AccII	CGCG	4 cut(s)	73, 153, 155, 305
AclWI	GGATC	3 cut(s)	363, 833, 1089
AcoI	YGGCCR	1 cut(s)	195
AcsI	RAATTY	3 cut(s)	190, 220, 1092
AcyI	GRCGYC	1 cut(s)	282
AfaI	GTAC	4 cut(s)	537, 726, 948, 965
AfeI	AGCGCT	1 cut(s)	298
AfiI	CCNNNNNNNGG	4 cut(s)	193, 352, 370, 640
AflIII	ACRYGT	2 cut(s)	383, 966
AgeI	ACCGGT	1 cut(s)	1109
AgsI	TTSAA	4 cut(s)	490, 556, 821, 905
AjiI	CACGTC	3 cut(s)	214, 384, 418
AjnI	CCWGG	1 cut(s)	667
AluBI	AGCT	2 cut(s)	627, 655
AluI	AGCT	2 cut(s)	627, 655
Alw21I	GWGCWC	1 cut(s)	423
Alw44I	GTGCAC	1 cut(s)	419
AlwI	GGATC	3 cut(s)	363, 833, 1089
Ama87I	CYCGRG	1 cut(s)	993
Aor51HI	AGCGCT	1 cut(s)	298
AoxI	GGCC	2 cut(s)	195, 1161
ApaLI	GTGCAC	1 cut(s)	419
ApeKI	GCWGC	2 cut(s)	299, 1063
ApoI	RAATTY	3 cut(s)	190, 220, 1092
AseI	ATTAAT	1 cut(s)	1047
AsiGI	ACCGGT	1 cut(s)	1109
AspLEI	GCGC	4 cut(s)	153, 155, 299, 439
AspS9I	GGNCC	3 cut(s)	160, 343, 1161
AsuC2I	CCSGG	6 cut(s)	164, 332, 350, 364, 994, 995
AsuHPI	GGTGA	2 cut(s)	743, 1087
AvaI	CYCGRG	1 cut(s)	993
AvaII	GGWCC	2 cut(s)	160, 343
BaeGI	GKGCMC	3 cut(s)	183, 423, 1035
BanI	GGYRCC	2 cut(s)	253, 1032
Bbv12I	GWGCWC	1 cut(s)	423
BbvI	GCAGC	2 cut(s)	286, 1075
BccI	CCATC	1 cut(s)	151
BceAI	ACGGC	4 cut(s)	129, 164, 292, 450
BcgI	CGANNNNNNTGC	2 cut(s)	448, 482
BciT130I	CCWGG	1 cut(s)	669
BcnI	CCSGG	6 cut(s)	164, 332, 350, 364, 994, 995
BfaI	CTAG	1 cut(s)	258
BfmI	CTRYAG	1 cut(s)	564
BfoI	RGCGCY	1 cut(s)	300
BglI	GCCNNNNNGGC	1 cut(s)	784
BglII	AGATCT	1 cut(s)	847
BisI	GCNGC	6 cut(s)	300, 303, 306, 406, 1064, 1164
BlsI	GCNGC	6 cut(s)	301, 304, 307, 407, 1065, 1165
Bme1390I	CCNGG	7 cut(s)	164, 332, 350, 364, 669, 994, 995
Bme18I	GGWCC	2 cut(s)	160, 343
BmeT110I	CYCGRG	1 cut(s)	993
BmgBI	CACGTC	3 cut(s)	214, 384, 418
BmgT120I	GGNCC	3 cut(s)	160, 343, 1161
BmiI	GGNNCC	6 cut(s)	162, 255, 561, 632, 1034, 1162
BmrFI	CCNGG	7 cut(s)	164, 332, 350, 364, 669, 994, 995
BmsI	GCATC	3 cut(s)	125, 246, 1199
BplI	GAGNNNNNCTC	2 cut(s)	503, 535
BpmI	CTGGAG	1 cut(s)	505
BpuEI	CTTGAG	1 cut(s)	677
BpuMI	CCSGG	6 cut(s)	164, 332, 350, 364, 994, 995
BsaHI	GRCGYC	1 cut(s)	282
BsaJI	CCNNGG	6 cut(s)	198, 303, 331, 639, 993, 1039
BsaWI	WCCGGW	1 cut(s)	1109
BsaXI	ACNNNNNCTCC	2 cut(s)	344, 374
Bsc4I	CCNNNNNNNGG	4 cut(s)	193, 352, 370, 640
Bse118I	RCCGGY	3 cut(s)	128, 141, 1109
Bse1I	ACTGG	2 cut(s)	740, 1061
Bse3DI	GCAATG	1 cut(s)	708
BseBI	CCWGG	1 cut(s)	669
BseDI	CCNNGG	6 cut(s)	198, 303, 331, 639, 993, 1039
BseGI	GGATG	1 cut(s)	880
BseLI	CCNNNNNNNGG	4 cut(s)	193, 352, 370, 640
BseMI	GCAATG	1 cut(s)	708
BseMII	CTCAG	2 cut(s)	560, 666
BseNI	ACTGG	2 cut(s)	740, 1061
BsePI	GCGCGC	1 cut(s)	151
BseRI	GAGGAG	5 cut(s)	54, 278, 281, 326, 329
BseSI	GKGCMC	3 cut(s)	183, 423, 1035
BseX3I	CGGCCG	1 cut(s)	195
BseXI	GCAGC	2 cut(s)	286, 1075
BseYI	CCCAGC	1 cut(s)	1157
BsgI	GTGCAG	1 cut(s)	764
Bsh1236I	CGCG	4 cut(s)	73, 153, 155, 305
Bsh1285I	CGRYCG	5 cut(s)	71, 142, 177, 198, 331
BshFI	GGCC	2 cut(s)	197, 1163
BshNI	GGYRCC	2 cut(s)	253, 1032
BshTI	ACCGGT	1 cut(s)	1109
BsiEI	CGRYCG	5 cut(s)	71, 142, 177, 198, 331
BsiHKAI	GWGCWC	1 cut(s)	423
BsiHKCI	CYCGRG	1 cut(s)	993
BsiSI	CCGG	8 cut(s)	129, 142, 164, 331, 350, 364, 994, 1110
BslFI	GGGAC	1 cut(s)	346
BslI	CCNNNNNNNGG	4 cut(s)	193, 352, 370, 640
BsmFI	GGGAC	1 cut(s)	346
BsnI	GGCC	2 cut(s)	197, 1163
BsoBI	CYCGRG	1 cut(s)	993
Bsp1286I	GDGCHC	3 cut(s)	183, 423, 1035
Bsp1407I	TGTACA	1 cut(s)	946
Bsp143I	GATC	7 cut(s)	68, 355, 733, 838, 847, 958, 1081
Bsp68I	TCGCGA	1 cut(s)	73
BspANI	GGCC	2 cut(s)	197, 1163
BspCNI	CTCAG	2 cut(s)	559, 667
BspFNI	CGCG	4 cut(s)	73, 153, 155, 305
BspLI	GGNNCC	6 cut(s)	162, 255, 561, 632, 1034, 1162
BspPI	GGATC	3 cut(s)	363, 833, 1089
BspT107I	GGYRCC	2 cut(s)	253, 1032
BsrDI	GCAATG	1 cut(s)	708
BsrFI	RCCGGY	3 cut(s)	128, 141, 1109
BsrGI	TGTACA	1 cut(s)	946
BsrI	ACTGG	2 cut(s)	740, 1061
BssAI	RCCGGY	3 cut(s)	128, 141, 1109
BssECI	CCNNGG	6 cut(s)	198, 303, 331, 639, 993, 1039
BssHII	GCGCGC	1 cut(s)	151
BssMI	GATC	7 cut(s)	68, 355, 733, 838, 847, 958, 1081
BssNI	GRCGYC	1 cut(s)	282
BssT1I	CCWWGG	1 cut(s)	639
Bst2UI	CCWGG	1 cut(s)	669
Bst4CI	ACNGT	2 cut(s)	178, 1123
BstACI	GRCGYC	1 cut(s)	282
BstAUI	TGTACA	1 cut(s)	946
BstC8I	GCNNGC	2 cut(s)	130, 153
BstDEI	CTNAG	5 cut(s)	539, 546, 675, 983, 1194
BstDSI	CCRYGG	1 cut(s)	303
BstENI	CCTNNNNNAGG	2 cut(s)	350, 638
BstF5I	GGATG	1 cut(s)	880
BstFNI	CGCG	4 cut(s)	73, 153, 155, 305
BstH2I	RGCGCY	1 cut(s)	300
BstHHI	GCGC	4 cut(s)	153, 155, 299, 439
BstKTI	GATC	7 cut(s)	71, 358, 736, 841, 850, 961, 1084
BstMBI	GATC	7 cut(s)	68, 355, 733, 838, 847, 958, 1081
BstMCI	CGRYCG	5 cut(s)	71, 142, 177, 198, 331
BstMWI	GCNNNNNNNGC	8 cut(s)	44, 59, 305, 411, 644, 784, 1060, 1163
BstNI	CCWGG	1 cut(s)	669
BstNSI	RCATGY	3 cut(s)	443, 889, 970
BstSCI	CCNGG	7 cut(s)	162, 330, 348, 362, 667, 992, 993
BstSFI	CTRYAG	1 cut(s)	564
BstSLI	GKGCMC	3 cut(s)	183, 423, 1035
BstUI	CGCG	4 cut(s)	73, 153, 155, 305
BstV1I	GCAGC	2 cut(s)	286, 1075
BstX2I	RGATCY	4 cut(s)	355, 838, 847, 1081
BstYI	RGATCY	4 cut(s)	355, 838, 847, 1081
BstZI	CGGCCG	1 cut(s)	195
BsuRI	GGCC	2 cut(s)	197, 1163
BtgI	CCRYGG	1 cut(s)	303
BtgZI	GCGATG	1 cut(s)	170
BtrI	CACGTC	3 cut(s)	214, 384, 418
BtsCI	GGATG	1 cut(s)	880
BtsI	GCAGTG	2 cut(s)	480, 1023
BtsIMutI	CAGTG	4 cut(s)	480, 747, 1023, 1054
BtuMI	TCGCGA	1 cut(s)	73
Cac8I	GCNNGC	2 cut(s)	130, 153
CfoI	GCGC	4 cut(s)	153, 155, 299, 439
Cfr10I	RCCGGY	3 cut(s)	128, 141, 1109
Cfr13I	GGNCC	3 cut(s)	160, 343, 1161
Cfr42I	CCGCGG	1 cut(s)	306
Cfr9I	CCCGGG	1 cut(s)	993
Csp6I	GTAC	4 cut(s)	536, 725, 947, 964
CspAI	ACCGGT	1 cut(s)	1109
CviAII	CATG	6 cut(s)	440, 456, 765, 886, 950, 967
CviJI	RGCY	6 cut(s)	145, 197, 627, 655, 1066, 1163
CviKI_1	RGCY	6 cut(s)	145, 197, 627, 655, 1066, 1163
CviQI	GTAC	4 cut(s)	536, 725, 947, 964
DdeI	CTNAG	5 cut(s)	539, 546, 675, 983, 1194
DpnI	GATC	7 cut(s)	70, 357, 735, 840, 849, 960, 1083
DpnII	GATC	7 cut(s)	68, 355, 733, 838, 847, 958, 1081
DrdI	GACNNNNNNGTC	2 cut(s)	281, 388
DseDI	GACNNNNNNGTC	2 cut(s)	281, 388
EaeI	YGGCCR	1 cut(s)	195
EagI	CGGCCG	1 cut(s)	195
EciI	GGCGGA	2 cut(s)	323, 385
EclXI	CGGCCG	1 cut(s)	195
Eco130I	CCWWGG	1 cut(s)	639
Eco47I	GGWCC	2 cut(s)	160, 343
Eco47III	AGCGCT	1 cut(s)	298
Eco52I	CGGCCG	1 cut(s)	195
Eco88I	CYCGRG	1 cut(s)	993
EcoNI	CCTNNNNNAGG	2 cut(s)	350, 638
EcoO109I	RGGNCCY	1 cut(s)	343
EcoRI	GAATTC	2 cut(s)	190, 220
EcoRII	CCWGG	1 cut(s)	667
EcoT14I	CCWWGG	1 cut(s)	639
ErhI	CCWWGG	1 cut(s)	639
FaeI	CATG	6 cut(s)	443, 459, 768, 889, 953, 970
FaqI	GGGAC	1 cut(s)	346
FatI	CATG	6 cut(s)	439, 455, 764, 885, 949, 966
FauNDI	CATATG	1 cut(s)	691
Fnu4HI	GCNGC	6 cut(s)	300, 303, 306, 406, 1064, 1164
FokI	GGATG	1 cut(s)	887
Fsp4HI	GCNGC	6 cut(s)	300, 303, 306, 406, 1064, 1164
FspBI	CTAG	1 cut(s)	258
GlaI	GCGC	4 cut(s)	152, 154, 298, 438
GluI	GCNGC	6 cut(s)	300, 303, 306, 406, 1064, 1164
GsaI	CCCAGC	1 cut(s)	1161
GsuI	CTGGAG	1 cut(s)	505
HaeII	RGCGCY	1 cut(s)	300
HaeIII	GGCC	2 cut(s)	197, 1163
HapII	CCGG	8 cut(s)	129, 142, 164, 331, 350, 364, 994, 1110
HhaI	GCGC	4 cut(s)	153, 155, 299, 439
Hin1I	GRCGYC	1 cut(s)	282
Hin1II	CATG	6 cut(s)	443, 459, 768, 889, 953, 970
Hin6I	GCGC	4 cut(s)	151, 153, 297, 437
HinP1I	GCGC	4 cut(s)	151, 153, 297, 437
HincII	GTYRAC	1 cut(s)	883
HindII	GTYRAC	1 cut(s)	883
HindIII	AAGCTT	1 cut(s)	653
HinfI	GANTC	8 cut(s)	4, 13, 18, 167, 389, 452, 598, 901
HpaII	CCGG	8 cut(s)	129, 142, 164, 331, 350, 364, 994, 1110
HphI	GGTGA	2 cut(s)	743, 1087
Hpy166II	GTNNAC	5 cut(s)	211, 421, 622, 883, 975
Hpy188I	TCNGA	4 cut(s)	232, 431, 549, 1040
Hpy188III	TCNNGA	7 cut(s)	72, 88, 137, 217, 842, 905, 1176
Hpy8I	GTNNAC	5 cut(s)	211, 421, 622, 883, 975
Hpy99I	CGWCG	8 cut(s)	218, 278, 284, 287, 326, 329, 419, 431
HpyAV	CCTTC	5 cut(s)	334, 550, 753, 1021, 1107
HpyCH4III	ACNGT	2 cut(s)	178, 1123
HpyCH4IV	ACGT	4 cut(s)	213, 282, 383, 417
HpyCH4V	TGCA	6 cut(s)	421, 459, 647, 745, 1016, 1190
HpyF10VI	GCNNNNNNNGC	8 cut(s)	44, 59, 305, 411, 644, 784, 1060, 1163
HpyF3I	CTNAG	5 cut(s)	539, 546, 675, 983, 1194
HpySE526I	ACGT	4 cut(s)	213, 282, 383, 417
Hsp92I	GRCGYC	1 cut(s)	282
Hsp92II	CATG	6 cut(s)	443, 459, 768, 889, 953, 970
HspAI	GCGC	4 cut(s)	151, 153, 297, 437
KroI	GCCGGC	1 cut(s)	128
KroNI	GCCGGC	1 cut(s)	130
KspI	CCGCGG	1 cut(s)	306
Kzo9I	GATC	7 cut(s)	68, 355, 733, 838, 847, 958, 1081
LmnI	GCTCC	4 cut(s)	67, 366, 524, 997
Lsp1109I	GCAGC	2 cut(s)	286, 1075
LweI	GCATC	3 cut(s)	125, 246, 1199
MaeI	CTAG	1 cut(s)	258
MaeII	ACGT	4 cut(s)	213, 282, 383, 417
MaeIII	GTNAC	3 cut(s)	41, 134, 1075
MalI	GATC	7 cut(s)	70, 357, 735, 840, 849, 960, 1083
MboI	GATC	7 cut(s)	68, 355, 733, 838, 847, 958, 1081
MboII	GAAGA	4 cut(s)	117, 604, 607, 857
MflI	RGATCY	4 cut(s)	355, 838, 847, 1081
MhlI	GDGCHC	3 cut(s)	183, 423, 1035
MluCI	AATT	7 cut(s)	83, 190, 220, 615, 1003, 1044, 1092
MlyI	GAGTC	3 cut(s)	7, 12, 398
MmeI	TCCRAC	2 cut(s)	210, 409
MreI	CGCCGGCG	1 cut(s)	128
MroNI	GCCGGC	1 cut(s)	128
MseI	TTAA	3 cut(s)	852, 1047, 1134
MspA1I	CMGCKG	2 cut(s)	305, 627
MspI	CCGG	8 cut(s)	129, 142, 164, 331, 350, 364, 994, 1110
MspR9I	CCNGG	7 cut(s)	164, 332, 350, 364, 669, 994, 995
MvaI	CCWGG	1 cut(s)	669
MvnI	CGCG	4 cut(s)	73, 153, 155, 305
MwoI	GCNNNNNNNGC	8 cut(s)	44, 59, 305, 411, 644, 784, 1060, 1163
NaeI	GCCGGC	1 cut(s)	130
NciI	CCSGG	6 cut(s)	164, 332, 350, 364, 994, 995
NdeI	CATATG	1 cut(s)	691
NdeII	GATC	7 cut(s)	68, 355, 733, 838, 847, 958, 1081
NgoMIV	GCCGGC	1 cut(s)	128
NlaIII	CATG	6 cut(s)	443, 459, 768, 889, 953, 970
NlaIV	GGNNCC	6 cut(s)	162, 255, 561, 632, 1034, 1162
NmeAIII	GCCGAG	1 cut(s)	223
NmuCI	GTSAC	2 cut(s)	134, 1075
NruI	TCGCGA	1 cut(s)	73
NspI	RCATGY	3 cut(s)	443, 889, 970
PauI	GCGCGC	1 cut(s)	151
PciI	ACATGT	1 cut(s)	966
PcsI	WCGNNNNNNNCGW	5 cut(s)	13, 213, 279, 282, 423
PdiI	GCCGGC	1 cut(s)	130
PfeI	GAWTC	5 cut(s)	4, 167, 452, 598, 901
PfoI	TCCNGGA	2 cut(s)	348, 362
PinAI	ACCGGT	1 cut(s)	1109
PkrI	GCNGC	6 cut(s)	301, 304, 307, 407, 1065, 1165
Ple19I	CGATCG	1 cut(s)	71
PleI	GAGTC	3 cut(s)	7, 12, 397
PpsI	GAGTC	3 cut(s)	7, 12, 397
PpuMI	RGGWCCY	1 cut(s)	343
PscI	ACATGT	1 cut(s)	966
PshBI	ATTAAT	1 cut(s)	1047
Psp5II	RGGWCCY	1 cut(s)	343
Psp6I	CCWGG	1 cut(s)	667
PspFI	CCCAGC	1 cut(s)	1157
PspGI	CCWGG	1 cut(s)	667
PspN4I	GGNNCC	6 cut(s)	162, 255, 561, 632, 1034, 1162
PspPI	GGNCC	3 cut(s)	160, 343, 1161
PspPPI	RGGWCCY	1 cut(s)	343
PsuI	RGATCY	4 cut(s)	355, 838, 847, 1081
PteI	GCGCGC	1 cut(s)	151
PvuI	CGATCG	1 cut(s)	71
PvuII	CAGCTG	1 cut(s)	627
RruI	TCGCGA	1 cut(s)	73
RsaI	GTAC	4 cut(s)	537, 726, 948, 965
RsaNI	GTAC	4 cut(s)	536, 725, 947, 964
SacII	CCGCGG	1 cut(s)	306
SaqAI	TTAA	3 cut(s)	852, 1047, 1134
SatI	GCNGC	6 cut(s)	300, 303, 306, 406, 1064, 1164
Sau3AI	GATC	7 cut(s)	68, 355, 733, 838, 847, 958, 1081
Sau96I	GGNCC	3 cut(s)	160, 343, 1161
SchI	GAGTC	3 cut(s)	7, 12, 398
ScrFI	CCNGG	7 cut(s)	164, 332, 350, 364, 669, 994, 995
SduI	GDGCHC	3 cut(s)	183, 423, 1035
SfaNI	GCATC	3 cut(s)	125, 246, 1199
SfcI	CTRYAG	1 cut(s)	564
Sfr303I	CCGCGG	1 cut(s)	306
SgrAI	CRCCGGYG	1 cut(s)	128
SgrBI	CCGCGG	1 cut(s)	306
SinI	GGWCC	2 cut(s)	160, 343
SmaI	CCCGGG	1 cut(s)	995
SmlI	CTYRAG	1 cut(s)	656
SmoI	CTYRAG	1 cut(s)	656
Sse9I	AATT	7 cut(s)	83, 190, 220, 615, 1003, 1044, 1092
SspMI	CTAG	1 cut(s)	258
StyD4I	CCNGG	7 cut(s)	162, 330, 348, 362, 667, 992, 993
StyI	CCWWGG	1 cut(s)	639
TaaI	ACNGT	2 cut(s)	178, 1123
TaiI	ACGT	4 cut(s)	216, 285, 386, 420
TaqI	TCGA	6 cut(s)	16, 67, 173, 216, 290, 468
TasI	AATT	7 cut(s)	83, 190, 220, 615, 1003, 1044, 1092
TatI	WGTACW	2 cut(s)	946, 963
TauI	GCSGC	4 cut(s)	305, 308, 408, 1166
TfiI	GAWTC	5 cut(s)	4, 167, 452, 598, 901
Tru1I	TTAA	3 cut(s)	852, 1047, 1134
Tru9I	TTAA	3 cut(s)	852, 1047, 1134
TscAI	CASTG	4 cut(s)	480, 747, 1023, 1061
TseFI	GTSAC	2 cut(s)	134, 1075
TseI	GCWGC	2 cut(s)	299, 1063
Tsp45I	GTSAC	2 cut(s)	134, 1075
TspDTI	ATGAA	3 cut(s)	17, 719, 966
TspGWI	ACGGA	1 cut(s)	1094
TspMI	CCCGGG	1 cut(s)	993
TspRI	CASTG	4 cut(s)	480, 747, 1023, 1061
VneI	GTGCAC	1 cut(s)	419
VpaK11BI	GGWCC	2 cut(s)	160, 343
VspI	ATTAAT	1 cut(s)	1047
XagI	CCTNNNNNAGG	2 cut(s)	350, 638
XapI	RAATTY	3 cut(s)	190, 220, 1092
XceI	RCATGY	3 cut(s)	443, 889, 970
XmaI	CCCGGG	1 cut(s)	993
XspI	CTAG	1 cut(s)	258
ZraI	GACGTC	1 cut(s)	283

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.