Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

tig00000116

Orthogroup ID

OG0005880

Physical Location & Seq

Genomic Coordinates Reverse (-)

85132 .. 92562

Gene Structure 7431 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom116g00060.8

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2262 bp

ATGCCTGCTTCTCCTTCAGACTCCCGCGGCAAATGGAGGAAGCGGAAGCGTGACCCCCAAATTCGCCGGAACAAGCGCGAGGACGACGAAGACGACGACGCCGACGACAACGAGCTCGACCCGAACGACGACTCGGAGGACCCCCAACATAACCCCCAATCCGCTCCCACACCCGATCCCGCCCCTCACGAGACCGAGGTCCTCGACGGTGGGGTCCGCGTAAGCGACTTCCCTCCCGTCGTTTTGCGCACCGTCAACCGGCCCCATTCCTCCGTTCTTGCCCTCGTCGCGCTCGAGCGAGCCAATCATTGCGGCGGGGATGCCAAGGGGCCCGCCAGTCCGATTTTATTGGAGAATGTGTCGTACGGTCAGCTCCAGGCGCTGTCCGGCGTGCCTGCTGATAGTCCGGCGTTGGATCCGGACCGTGCAGATGGCTCCGGGGCGGCTTACGTGGTCATACCGCCGTCGATTATGGAGGGCCGTGGCGTTGTGAAGCGATATGGGAACAGAGTTCATGTGGTTCCAATGCACGCAGATTGGTTTTCACCTGCCACAGTGCATCGACTAGAGAGACAGGTGGTGCCACATTTTTTCTCAGGAAAATCATCAGATCATACTCCTGAGCTATACATGCATTGTAGGAATGAAATTGTTGCCAAATACATGGAAAATCCAGAGAAGAGGCTTGCATTTTCTGATTTCCAACAATTATTAGGTCGTCTAAGTACCGAAGATTTGACTCGAATAATTCGTTTTCTTGATCACTGGGGAATTATTAATTACTGTGCTGAAGCACCCAGTCATGAGCCGTGCAATGGCAGTTCCTACTTAAGGGAGGAGGTAAATGGTGAGATTCAAGTGCCATCAGCTGCTCTGAAGTCCATTGATAGTTTAATCAAATTTGACAAGCCCAGATGTAGGCTTAAGGCGGCTGAAGTTTATTTGTCATTGCCATGTCATGGTGATGATGATGTCCCTGATTTGGACAACACAATTCGGAAGCGTCTATCTGAAAATCATTGCAATTACTGTTCTTCTTCTCTTCCCAGTGTATACTATCAGTCACAGAAAGAGGTTGATGTATTGCTGTGCTCTAATTGCTTCCATGAGGGAAGATATGTTGTTGGTCATTCAAGCATAGATTTTGTACGGATGGATTCAACAAAAGATTATGGTGATTTGGATGGGGAAAGTTGGACCGATCAAGAAACCCTATTGCTGCTCGAGGCAATGGAAATACACAATGAGAACTGGAACGAAATTGCTGAGTATGTCGGTTCAAAGTCAAAAGCACAATGCATCCTTCATTTTCTTCGTTTGCCTGTGGAGGATGGCCTGCTTGAAAATATTGAAGTTCCGGGCGTGTCCCTGTCTTCCAATTCATCAGATAGAGATGGTCGTGGAGGATTTCATTCAAGTTCAAATGGTGATGCAGCAGGATCCTTCCTACAAGATGCTGATTCTGACAGTAGGTTCCCTTTTGCGAATTCTGGGAATCCAGTCATGGCCCTGGTTTCGTTTCTGGCCTCCTCTGTTGGGCCAAGAGTCGCTGCATCTTGTGCCCATGCAGCCTTGACGGTATTTTCTGAGGATAATGGTGTATCTGCCTCTGCAAAAAAGAACTCAGCAGGCCATGGTTCTTGGGGTCAAAATGAGGCAGGCGTGGTTCCAATACCTACAGAAAAAGTAAAAGCTGCTGCCAAGGCCGGGCTAGCTGCAGCTGCAATAAAAGCAAAATTGTTTGCTGATCACGAAGAACGGGAAATTCAGAGGCTATCTGCTAATATCATAAATCATCAGTTGAAGAGATTGGAGCTGAAGTTAAAGCAGTTTGCAGAAGTGGAAACCTTCCTAATGAAAGAATGTGAACAAGTGGAGAAGACAAGGCAGAGGATGGTTAGTGAACGTGCCCGCATTATGTCAACTCAGTTTGGACCTGCTGGAGCTTCGCCCATGAGTTTAGGAGGTGTTGGTTCTTCCATGTCAAATAATAACGTTGGTAACAATAGGCAACAGATTATGTCACCTTCAGCTTCACAAACGAGCATATCAGGATACAGCAACAACCAATCAGTCAATCCCCACATGCCATTTGTGCCACGTCAATCAATGCTAGGGTTGGGGCCGAGGATGCCTTTAACATCCATACAGCCATCCTCATCGGCTCAAAATGCCATGTTTAATGCCACAGGGGCTGCCCAGCCGACGCTAAATCATCCAATGTTGAGGCCTGTACCAGGTACCAGCTCCGGTCTAGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000785 GO:0000790 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006325 GO:0006338 GO:0006996 GO:0008150 GO:0009987 GO:0016043 GO:0016514 GO:0031974 GO:0031981 GO:0032991 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0051276 GO:0070013 GO:0070603 GO:0071840 GO:1902494 GO:1904949

KEGG Pathways

Metabolic & Signaling

ko04714 ko05225 map04714 map05225

Pfam Domains

Protein Families

Myb_DNA-binding SWIRM SWIRM-assoc_1

Protein Analysis

754

Amino Acids

82.12

Weight (kDa)

5.65

Isoelectric Point (pI)

51.52

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005880)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21700
fragaria_vesca	FvH4_2g27500 FvH4_2g27500 FvH4_2g27500 FvH4_2g27500 FvH4_2g27500
malus_domestica	MD00G1030000.v1.1 MD00G1041900.v1.1
prunus_persica	Prupe.1G492600_v2.0.a1 Prupe.1G492600_v2.0.a1 Prupe.1G492600_v2.0.a1
pyrus_communis	pycom116g00060 pycom15g30900
rosa_chinensis	RchiOBHm_Chr6g0296331
rosa_laevigata	RLG00000011705
rosa_multiflora	Rmu_co8413639.1_g000001 Rmu_sc0001478.1_g000003 Rmu_sc0014424.1_g000002 Rmu_sc0042048.1_g000001
rosa_roxburghii	Rroxscaffold_5G00346270 Rroxscaffold_7G00171620 Rroxscaffold_7G00178460
rosa_rugosa	Rorug06G0261200
rosa_samantha	Rh6AG372900 Rh6BG381000 Rh6CG386200 Rh6DG373700
rosa_wichuraiana	Rw6G032510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	556
AasI	GACNNNNNNGTC	1 cut(s)	212
Acc16I	TGCGCA	1 cut(s)	248
Acc36I	ACCTGC	2 cut(s)	556, 1945
Acc65I	GGTACC	1 cut(s)	2240
AccB1I	GGYRCC	2 cut(s)	580, 2240
AccB7I	CCANNNNNTGG	1 cut(s)	959
AccBSI	CCGCTC	1 cut(s)	164
AccI	GTMKAC	1 cut(s)	1053
AccII	CGCG	4 cut(s)	27, 78, 219, 290
AccIII	TCCGGA	1 cut(s)	418
AclI	AACGTT	1 cut(s)	1995
AclWI	GGATC	5 cut(s)	170, 410, 423, 1434, 1447
AcsI	RAATTY	4 cut(s)	60, 899, 1486, 1764
AcuI	CTGAAG	5 cut(s)	810, 896, 954, 1838, 2013
AcyI	GRCGYC	1 cut(s)	99
AfaI	GTAC	5 cut(s)	365, 727, 1149, 2235, 2242
AfiI	CCNNNNNNNGG	9 cut(s)	258, 815, 831, 918, 959, 982, 1536, 1707, 2237
AflII	CTTAAG	2 cut(s)	829, 923
AgsI	TTSAA	9 cut(s)	857, 1134, 1161, 1281, 1343, 1352, 1416, 1422, 1804
AjiI	CACGTC	1 cut(s)	2102
AjnI	CCWGG	3 cut(s)	375, 1509, 2236
Alw21I	GWGCWC	2 cut(s)	117, 1094
Alw26I	GTCTC	2 cut(s)	185, 565
AlwI	GGATC	5 cut(s)	170, 410, 423, 1434, 1447
AlwNI	CAGNNNCTG	2 cut(s)	382, 2195
Ama87I	CYCGRG	2 cut(s)	293, 1223
Aor13HI	TCCGGA	1 cut(s)	418
ApaI	GGGCCC	1 cut(s)	333
ApoI	RAATTY	4 cut(s)	60, 899, 1486, 1764
AseI	ATTAAT	1 cut(s)	777
Asp718I	GGTACC	1 cut(s)	2240
AspLEI	GCGC	4 cut(s)	78, 249, 292, 382
AsuC2I	CCSGG	3 cut(s)	439, 1359, 1708
AsuHPI	GGTGA	6 cut(s)	537, 860, 974, 1187, 1439, 2016
AsuNHI	GCTAGC	1 cut(s)	1711
AvaI	CYCGRG	2 cut(s)	293, 1223
AvaII	GGWCC	6 cut(s)	139, 199, 214, 421, 1197, 1934
BaeGI	GKGCMC	3 cut(s)	333, 1564, 1912
BamHI	GGATCC	2 cut(s)	415, 1439
BanI	GGYRCC	2 cut(s)	580, 2240
BanII	GRGCYC	2 cut(s)	117, 333
BauI	CACGAG	1 cut(s)	188
BbsI	GAAGAC	3 cut(s)	96, 1365, 1886
Bbv12I	GWGCWC	2 cut(s)	117, 1094
BccI	CCATC	8 cut(s)	425, 871, 1147, 1178, 1325, 1388, 1888, 2161
BceAI	ACGGC	3 cut(s)	448, 465, 793
BciT130I	CCWGG	3 cut(s)	377, 1511, 2238
BciVI	GTATCC	1 cut(s)	2048
BclI	TGATCA	2 cut(s)	760, 1747
BcnI	CCSGG	3 cut(s)	439, 1359, 1708
BcoDI	GTCTC	2 cut(s)	185, 565
BfaI	CTAG	4 cut(s)	566, 1712, 2114, 2255
BfmI	CTRYAG	2 cut(s)	1677, 1716
BfoI	RGCGCY	1 cut(s)	383
BfrI	CTTAAG	2 cut(s)	829, 923
BfuAI	ACCTGC	2 cut(s)	556, 1945
BfuI	GTATCC	1 cut(s)	2048
BglI	GCCNNNNNGGC	1 cut(s)	2192
Bme1390I	CCNGG	6 cut(s)	377, 439, 1359, 1511, 1708, 2238
Bme18I	GGWCC	6 cut(s)	139, 199, 214, 421, 1197, 1934
BmeT110I	CYCGRG	2 cut(s)	293, 1223
BmgBI	CACGTC	1 cut(s)	2102
BmrFI	CCNGG	6 cut(s)	377, 439, 1359, 1511, 1708, 2238
BmrI	ACTGGG	3 cut(s)	775, 792, 1041
BmsI	GCATC	7 cut(s)	310, 568, 1308, 1420, 1444, 1562, 2121
BmtI	GCTAGC	1 cut(s)	1715
BmuI	ACTGGG	3 cut(s)	775, 792, 1041
BoxI	GACNNNNGTC	1 cut(s)	197
BpiI	GAAGAC	3 cut(s)	96, 1365, 1886
BpmI	CTGGAG	2 cut(s)	359, 1962
Bpu10I	CCTNAGC	1 cut(s)	621
BpuMI	CCSGG	3 cut(s)	439, 1359, 1708
BsaAI	YACGTR	1 cut(s)	451
BsaHI	GRCGYC	1 cut(s)	99
BsaI	GGTCTC	1 cut(s)	185
BsaJI	CCNNGG	9 cut(s)	25, 195, 324, 438, 481, 1509, 1633, 1701, 2126
BsaWI	WCCGGW	2 cut(s)	418, 2249
BsaXI	ACNNNNNCTCC	4 cut(s)	344, 374, 1805, 1835
Bsc4I	CCNNNNNNNGG	9 cut(s)	258, 815, 831, 918, 959, 982, 1536, 1707, 2237
Bse118I	RCCGGY	1 cut(s)	258
Bse1I	ACTGG	6 cut(s)	336, 770, 798, 1047, 1256, 1499
Bse3DI	GCAATG	5 cut(s)	307, 820, 947, 1018, 1236
BseAI	TCCGGA	1 cut(s)	418
BseBI	CCWGG	3 cut(s)	377, 1511, 2238
BseDI	CCNNGG	9 cut(s)	25, 195, 324, 438, 481, 1509, 1633, 1701, 2126
BseLI	CCNNNNNNNGG	9 cut(s)	258, 815, 831, 918, 959, 982, 1536, 1707, 2237
BseMI	GCAATG	5 cut(s)	307, 820, 947, 1018, 1236
BseMII	CTCAG	6 cut(s)	609, 612, 1257, 1578, 1638, 1940
BseNI	ACTGG	6 cut(s)	336, 770, 798, 1047, 1256, 1499
BseRI	GAGGAG	2 cut(s)	851, 1519
BseSI	GKGCMC	3 cut(s)	333, 1564, 1912
BseYI	CCCAGC	1 cut(s)	2199
BsgI	GTGCAG	1 cut(s)	447
Bsh1236I	CGCG	4 cut(s)	27, 78, 219, 290
BshNI	GGYRCC	2 cut(s)	580, 2240
BsiHKAI	GWGCWC	2 cut(s)	117, 1094
BsiHKCI	CYCGRG	2 cut(s)	293, 1223
BsiSI	CCGG	9 cut(s)	67, 259, 387, 407, 419, 438, 1358, 1707, 2250
BsiWI	CGTACG	1 cut(s)	363
BslFI	GGGAC	2 cut(s)	959, 1351
BslI	CCNNNNNNNGG	9 cut(s)	258, 815, 831, 918, 959, 982, 1536, 1707, 2237
BsmAI	GTCTC	2 cut(s)	185, 565
BsmFI	GGGAC	2 cut(s)	959, 1351
Bso31I	GGTCTC	1 cut(s)	185
BsoBI	CYCGRG	2 cut(s)	293, 1223
Bsp120I	GGGCCC	1 cut(s)	329
Bsp1286I	GDGCHC	5 cut(s)	117, 333, 1094, 1564, 1912
Bsp13I	TCCGGA	1 cut(s)	418
Bsp143I	GATC	7 cut(s)	175, 415, 610, 760, 1201, 1439, 1747
Bsp19I	CCATGG	1 cut(s)	1633
BspCNI	CTCAG	6 cut(s)	608, 613, 1258, 1579, 1637, 1939
BspEI	TCCGGA	1 cut(s)	418
BspFNI	CGCG	4 cut(s)	27, 78, 219, 290
BspHI	TCATGA	1 cut(s)	802
BspMAI	CTGCAG	1 cut(s)	1720
BspMI	ACCTGC	2 cut(s)	556, 1945
BspOI	GCTAGC	1 cut(s)	1715
BspPI	GGATC	5 cut(s)	170, 410, 423, 1434, 1447
BspT107I	GGYRCC	2 cut(s)	580, 2240
BspTI	CTTAAG	2 cut(s)	829, 923
BspTNI	GGTCTC	1 cut(s)	185
BsrBI	CCGCTC	1 cut(s)	164
BsrDI	GCAATG	5 cut(s)	307, 820, 947, 1018, 1236
BsrFI	RCCGGY	1 cut(s)	258
BsrI	ACTGG	6 cut(s)	336, 770, 798, 1047, 1256, 1499
BssAI	RCCGGY	1 cut(s)	258
BssECI	CCNNGG	9 cut(s)	25, 195, 324, 438, 481, 1509, 1633, 1701, 2126
BssMI	GATC	7 cut(s)	175, 415, 610, 760, 1201, 1439, 1747
BssNAI	GTATAC	1 cut(s)	1054
BssNI	GRCGYC	1 cut(s)	99
BssSI	CACGAG	1 cut(s)	188
BssT1I	CCWWGG	3 cut(s)	324, 1633, 1701
Bst1107I	GTATAC	1 cut(s)	1054
Bst2BI	CACGAG	1 cut(s)	188
Bst2UI	CCWGG	3 cut(s)	377, 1511, 2238
Bst4CI	ACNGT	9 cut(s)	209, 253, 368, 425, 556, 785, 1031, 1469, 1579
Bst6I	CTCTTC	3 cut(s)	674, 1047, 1799
BstACI	GRCGYC	1 cut(s)	99
BstAFI	CTTAAG	2 cut(s)	829, 923
BstAPI	GCANNNNNTGC	1 cut(s)	1559
BstBAI	YACGTR	1 cut(s)	451
BstDEI	CTNAG	7 cut(s)	595, 621, 722, 1266, 1587, 1624, 1926
BstDSI	CCRYGG	3 cut(s)	25, 481, 1633
BstENI	CCTNNNNNAGG	2 cut(s)	829, 2235
BstFNI	CGCG	4 cut(s)	27, 78, 219, 290
BstH2I	RGCGCY	1 cut(s)	383
BstHHI	GCGC	4 cut(s)	78, 249, 292, 382
BstKTI	GATC	7 cut(s)	178, 418, 613, 763, 1204, 1442, 1750
BstMAI	GTCTC	2 cut(s)	185, 565
BstMBI	GATC	7 cut(s)	175, 415, 610, 760, 1201, 1439, 1747
BstNI	CCWGG	3 cut(s)	377, 1511, 2238
BstNSI	RCATGY	2 cut(s)	634, 2089
BstPAI	GACNNNNGTC	1 cut(s)	197
BstSCI	CCNGG	6 cut(s)	375, 437, 1357, 1509, 1706, 2236
BstSFI	CTRYAG	2 cut(s)	1677, 1716
BstSLI	GKGCMC	3 cut(s)	333, 1564, 1912
BstUI	CGCG	4 cut(s)	27, 78, 219, 290
BstV2I	GAAGAC	3 cut(s)	96, 1365, 1886
BstX2I	RGATCY	2 cut(s)	415, 1439
BstXI	CCANNNNNNTGG	1 cut(s)	664
BstYI	RGATCY	2 cut(s)	415, 1439
BstZ17I	GTATAC	1 cut(s)	1054
BsuI	GTATCC	1 cut(s)	2048
BtgI	CCRYGG	3 cut(s)	25, 481, 1633
BtrI	CACGTC	1 cut(s)	2102
BtsIMutI	CAGTG	3 cut(s)	561, 763, 1054
BveI	ACCTGC	2 cut(s)	556, 1945
CaiI	CAGNNNCTG	2 cut(s)	382, 2195
CciI	TCATGA	1 cut(s)	802
CfoI	GCGC	4 cut(s)	78, 249, 292, 382
Cfr10I	RCCGGY	1 cut(s)	258
Cfr42I	CCGCGG	1 cut(s)	28
CpoI	CGGWCCG	1 cut(s)	421
CseI	GACGC	3 cut(s)	107, 992, 2215
CsiI	ACCWGGT	1 cut(s)	2236
Csp6I	GTAC	5 cut(s)	364, 726, 1148, 2234, 2241
CspI	CGGWCCG	1 cut(s)	421
CviQI	GTAC	5 cut(s)	364, 726, 1148, 2234, 2241
DdeI	CTNAG	7 cut(s)	595, 621, 722, 1266, 1587, 1624, 1926
DpnI	GATC	7 cut(s)	177, 417, 612, 762, 1203, 1441, 1749
DpnII	GATC	7 cut(s)	175, 415, 610, 760, 1201, 1439, 1747
DrdI	GACNNNNNNGTC	1 cut(s)	212
DseDI	GACNNNNNNGTC	1 cut(s)	212
Eam1104I	CTCTTC	3 cut(s)	674, 1047, 1799
EarI	CTCTTC	3 cut(s)	674, 1047, 1799
Ecl136II	GAGCTC	1 cut(s)	115
Eco130I	CCWWGG	3 cut(s)	324, 1633, 1701
Eco147I	AGGCCT	1 cut(s)	2230
Eco24I	GRGCYC	2 cut(s)	117, 333
Eco31I	GGTCTC	1 cut(s)	185
Eco47I	GGWCC	6 cut(s)	139, 199, 214, 421, 1197, 1934
Eco53kI	GAGCTC	1 cut(s)	115
Eco57I	CTGAAG	5 cut(s)	810, 896, 954, 1838, 2013
Eco88I	CYCGRG	2 cut(s)	293, 1223
EcoICRI	GAGCTC	1 cut(s)	115
EcoNI	CCTNNNNNAGG	2 cut(s)	829, 2235
EcoO109I	RGGNCCY	3 cut(s)	139, 199, 329
EcoRI	GAATTC	1 cut(s)	1486
EcoRII	CCWGG	3 cut(s)	375, 1509, 2236
EcoT14I	CCWWGG	3 cut(s)	324, 1633, 1701
EcoT22I	ATGCAT	2 cut(s)	636, 1301
EcoT38I	GRGCYC	2 cut(s)	117, 333
ErhI	CCWWGG	3 cut(s)	324, 1633, 1701
FaqI	GGGAC	2 cut(s)	959, 1351
FauI	CCCGC	5 cut(s)	32, 187, 308, 340, 1919
FbaI	TGATCA	2 cut(s)	760, 1747
FblI	GTMKAC	1 cut(s)	1053
FriOI	GRGCYC	2 cut(s)	117, 333
FspBI	CTAG	4 cut(s)	566, 1712, 2114, 2255
FspI	TGCGCA	1 cut(s)	248
GlaI	GCGC	4 cut(s)	77, 248, 291, 381
GsaI	CCCAGC	1 cut(s)	2203
GsuI	CTGGAG	2 cut(s)	359, 1962
HaeII	RGCGCY	1 cut(s)	383
HapII	CCGG	9 cut(s)	67, 259, 387, 407, 419, 438, 1358, 1707, 2250
HgaI	GACGC	3 cut(s)	107, 992, 2215
HhaI	GCGC	4 cut(s)	78, 249, 292, 382
Hin1I	GRCGYC	1 cut(s)	99
Hin6I	GCGC	4 cut(s)	76, 247, 290, 380
HinP1I	GCGC	4 cut(s)	76, 247, 290, 380
HincII	GTYRAC	2 cut(s)	256, 1923
HindII	GTYRAC	2 cut(s)	256, 1923
HinfI	GANTC	8 cut(s)	20, 131, 739, 853, 1157, 1460, 1495, 1545
HpaII	CCGG	9 cut(s)	67, 259, 387, 407, 419, 438, 1358, 1707, 2250
HphI	GGTGA	6 cut(s)	537, 860, 974, 1187, 1439, 2016
Hpy166II	GTNNAC	5 cut(s)	256, 1054, 1868, 1904, 1923
Hpy8I	GTNNAC	5 cut(s)	256, 1054, 1868, 1904, 1923
HpyAV	CCTTC	5 cut(s)	24, 1313, 1453, 1858, 2037
HpyCH4III	ACNGT	9 cut(s)	209, 253, 368, 425, 556, 785, 1031, 1469, 1579
HpyCH4IV	ACGT	4 cut(s)	450, 1906, 1995, 2101
HpyF3I	CTNAG	7 cut(s)	595, 621, 722, 1266, 1587, 1624, 1926
HpySE526I	ACGT	4 cut(s)	450, 1906, 1995, 2101
Hsp92I	GRCGYC	1 cut(s)	99
HspAI	GCGC	4 cut(s)	76, 247, 290, 380
Kpn2I	TCCGGA	1 cut(s)	418
KpnI	GGTACC	1 cut(s)	2244
Ksp22I	TGATCA	2 cut(s)	760, 1747
KspI	CCGCGG	1 cut(s)	28
Kzo9I	GATC	7 cut(s)	175, 415, 610, 760, 1201, 1439, 1747
LmnI	GCTCC	6 cut(s)	169, 378, 440, 1813, 1943, 2252
LweI	GCATC	7 cut(s)	310, 568, 1308, 1420, 1444, 1562, 2121
MabI	ACCWGGT	1 cut(s)	2236
MaeI	CTAG	4 cut(s)	566, 1712, 2114, 2255
MaeII	ACGT	4 cut(s)	450, 1906, 1995, 2101
MaeIII	GTNAC	4 cut(s)	50, 1062, 2000, 2022
MalI	GATC	7 cut(s)	177, 417, 612, 762, 1203, 1441, 1749
MbiI	CCGCTC	1 cut(s)	164
MboI	GATC	7 cut(s)	175, 415, 610, 760, 1201, 1439, 1747
MflI	RGATCY	2 cut(s)	415, 1439
MhlI	GDGCHC	5 cut(s)	117, 333, 1094, 1564, 1912
MlyI	GAGTC	4 cut(s)	14, 125, 733, 1554
MmeI	TCCRAC	3 cut(s)	393, 727, 1175
Mph1103I	ATGCAT	2 cut(s)	636, 1301
MroI	TCCGGA	1 cut(s)	418
MseI	TTAA	7 cut(s)	777, 830, 893, 924, 1823, 2138, 2181
MslI	CAYNNNNRTG	2 cut(s)	952, 963
MspA1I	CMGCKG	3 cut(s)	27, 869, 1721
MspCI	CTTAAG	2 cut(s)	829, 923
MspI	CCGG	9 cut(s)	67, 259, 387, 407, 419, 438, 1358, 1707, 2250
MspR9I	CCNGG	6 cut(s)	377, 439, 1359, 1511, 1708, 2238
MvaI	CCWGG	3 cut(s)	377, 1511, 2238
MvnI	CGCG	4 cut(s)	27, 78, 219, 290
NciI	CCSGG	3 cut(s)	439, 1359, 1708
NcoI	CCATGG	1 cut(s)	1633
NdeII	GATC	7 cut(s)	175, 415, 610, 760, 1201, 1439, 1747
NheI	GCTAGC	1 cut(s)	1711
NmeAIII	GCCGAG	1 cut(s)	2151
NmuCI	GTSAC	3 cut(s)	50, 1062, 2022
NsbI	TGCGCA	1 cut(s)	248
NsiI	ATGCAT	2 cut(s)	636, 1301
NspI	RCATGY	2 cut(s)	634, 2089
PaeR7I	CTCGAG	2 cut(s)	293, 1223
PagI	TCATGA	1 cut(s)	802
PaqCI	CACCTGC	1 cut(s)	556
PceI	AGGCCT	1 cut(s)	2230
PcsI	WCGNNNNNNNCGW	7 cut(s)	90, 93, 99, 102, 123, 291, 748
PfeI	GAWTC	4 cut(s)	853, 1157, 1460, 1495
Pfl23II	CGTACG	1 cut(s)	363
PflMI	CCANNNNNTGG	1 cut(s)	959
PleI	GAGTC	4 cut(s)	14, 125, 733, 1553
PpsI	GAGTC	4 cut(s)	14, 125, 733, 1553
Ppu21I	YACGTR	1 cut(s)	451
PpuMI	RGGWCCY	2 cut(s)	139, 199
PshAI	GACNNNNGTC	1 cut(s)	197
PshBI	ATTAAT	1 cut(s)	777
Psp124BI	GAGCTC	1 cut(s)	117
Psp1406I	AACGTT	1 cut(s)	1995
Psp5II	RGGWCCY	2 cut(s)	139, 199
Psp6I	CCWGG	3 cut(s)	375, 1509, 2236
PspFI	CCCAGC	1 cut(s)	2199
PspGI	CCWGG	3 cut(s)	375, 1509, 2236
PspLI	CGTACG	1 cut(s)	363
PspOMI	GGGCCC	1 cut(s)	329
PspPPI	RGGWCCY	2 cut(s)	139, 199
PspXI	VCTCGAGB	2 cut(s)	293, 1223
PstI	CTGCAG	1 cut(s)	1720
PstNI	CAGNNNCTG	2 cut(s)	382, 2195
PsuI	RGATCY	2 cut(s)	415, 1439
PvuII	CAGCTG	2 cut(s)	869, 1721
RsaI	GTAC	5 cut(s)	365, 727, 1149, 2235, 2242
RsaNI	GTAC	5 cut(s)	364, 726, 1148, 2234, 2241
RseI	CAYNNNNRTG	2 cut(s)	952, 963
Rsr2I	CGGWCCG	1 cut(s)	421
RsrII	CGGWCCG	1 cut(s)	421
SacI	GAGCTC	1 cut(s)	117
SacII	CCGCGG	1 cut(s)	28
SaqAI	TTAA	7 cut(s)	777, 830, 893, 924, 1823, 2138, 2181
Sau3AI	GATC	7 cut(s)	175, 415, 610, 760, 1201, 1439, 1747
SchI	GAGTC	4 cut(s)	14, 125, 733, 1554
ScrFI	CCNGG	6 cut(s)	377, 439, 1359, 1511, 1708, 2238
SduI	GDGCHC	5 cut(s)	117, 333, 1094, 1564, 1912
SexAI	ACCWGGT	1 cut(s)	2236
SfaNI	GCATC	7 cut(s)	310, 568, 1308, 1420, 1444, 1562, 2121
SfcI	CTRYAG	2 cut(s)	1677, 1716
Sfr274I	CTCGAG	2 cut(s)	293, 1223
Sfr303I	CCGCGG	1 cut(s)	28
SgrBI	CCGCGG	1 cut(s)	28
SinI	GGWCC	6 cut(s)	139, 199, 214, 421, 1197, 1934
SlaI	CTCGAG	2 cut(s)	293, 1223
SmiMI	CAYNNNNRTG	2 cut(s)	952, 963
SmlI	CTYRAG	4 cut(s)	293, 829, 923, 1223
SmoI	CTYRAG	4 cut(s)	293, 829, 923, 1223
SseBI	AGGCCT	1 cut(s)	2230
SspI	AATATT	1 cut(s)	1348
SspMI	CTAG	4 cut(s)	566, 1712, 2114, 2255
SstI	GAGCTC	1 cut(s)	117
StuI	AGGCCT	1 cut(s)	2230
StyD4I	CCNGG	6 cut(s)	375, 437, 1357, 1509, 1706, 2236
StyI	CCWWGG	3 cut(s)	324, 1633, 1701
TaaI	ACNGT	9 cut(s)	209, 253, 368, 425, 556, 785, 1031, 1469, 1579
TaiI	ACGT	4 cut(s)	453, 1909, 1998, 2104
TaqI	TCGA	7 cut(s)	117, 204, 294, 467, 562, 742, 1224
TaqII	GACCGA	2 cut(s)	209, 1214
TauI	GCSGC	4 cut(s)	30, 315, 446, 932
TfiI	GAWTC	4 cut(s)	853, 1157, 1460, 1495
Tru1I	TTAA	7 cut(s)	777, 830, 893, 924, 1823, 2138, 2181
Tru9I	TTAA	7 cut(s)	777, 830, 893, 924, 1823, 2138, 2181
TscAI	CASTG	3 cut(s)	561, 770, 1054
TseFI	GTSAC	3 cut(s)	50, 1062, 2022
Tsp45I	GTSAC	3 cut(s)	50, 1062, 2022
TspDTI	ATGAA	6 cut(s)	503, 660, 1295, 1371, 1400, 1871
TspGWI	ACGGA	2 cut(s)	262, 1165
TspRI	CASTG	3 cut(s)	561, 770, 1054
Van91I	CCANNNNNTGG	1 cut(s)	959
Vha464I	CTTAAG	2 cut(s)	829, 923
VpaK11BI	GGWCC	6 cut(s)	139, 199, 214, 421, 1197, 1934
VspI	ATTAAT	1 cut(s)	777
XagI	CCTNNNNNAGG	2 cut(s)	829, 2235
XapI	RAATTY	4 cut(s)	60, 899, 1486, 1764
XceI	RCATGY	2 cut(s)	634, 2089
XhoI	CTCGAG	2 cut(s)	293, 1223
XmiI	GTMKAC	1 cut(s)	1053
XspI	CTAG	4 cut(s)	566, 1712, 2114, 2255
Zsp2I	ATGCAT	2 cut(s)	636, 1301

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.