Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0005880

Physical Location & Seq

Genomic Coordinates Forward (+)

56653457 .. 56660474

Gene Structure 7018 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G032510.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1899 bp

ATGGAAGGCCGCGGCGTTGTGAAGCGGTATGGGAGTAGAGTTCATGTGGTTCCAATGCACGCAGATTGGTTTTCACCGGCTACAGTGCATCGACTGGAGAGACAGGTGGTGCCACATTTTTTCTCAGGAAAATCACCAGAGTTTACTCCTGAGATGTACATGCAAAGTAGGAATGAAATTGTTGCCAAGTACATGGAAAACCCAGAGAAGAGGCTTACAGTTTCTGATTGCACAAAATTAACAAGCCATCTAAATACTGAAGATTTGACTCGAATAGTTCGGTTTCTTGATCACTGGGGAATTATCAATTACTCTGCTGCCGCACCAAGTCCTGAGCCTTGGAATGGTAATTCCTACTTAAGGGAGGAGCAAAATGGTGAGATTCATGTTCCATCAGCTGCGTTGAAGTCGATTGATAGTCTGATCAAATTTGACAAGCCCAGATGTAGGCTTAAGGCAGCTGATGTTTATAAGTCATTGTCCTGTCATGACGACGATGATGACACCTCTGATTTGGACAACAGAATTCGAAAACGTCTCTGTGAAAATCATTGCAATTATTGTTCGTGTTCTCTTCCCAGTGTATGCTATCAGTCACAGAAGGAGGTTGATGTACTGCTCTGCTCTGACTGCTTCCATGAGGGAAGATATGTTGTGGGCCATTCAAGCATAGATTTCATACGAGTGGATTCAACAAAAGATTATGGCGATCCAGATGGGGAAAATTGGACTGATCAAGAAACCCTACTGCTGCTTGAGGCCATGGAAATCTATAATGAGAACTGGAATGAAATTGCAGAGCATGTTGGTACAAAGTCAAAAGCGCAATGCATACTTCATTTTCTACGTTTGCCTGTGGAGGATGGCCTGCTGGAAAATATTGAAGTTCCAAAGATGCCTCTGTCATCCAACTCGTCAAATAGAGATGATCATGGCGGATTTTATTCAACTTCAAATGGGAATTCAGCAGGATCCTGCCTACAAGATGGTGATTCTGAAAGCAGGTTCCCTTTTGCAAATTCTGGGAATCCAGTCATGTCCCTGGTTGCCTTTCTGGCCTCTTCTGTTGGGCCAAGAGTCGCTGCATCTTGTGCCCATGCAGCCTTGGCAGTGTTGTCTGAGGACAATGGCTTACCTGCTTCTGGTAGTAATTTGCAGGAAGGATCAGGAGGACATAGGATGAACTTGGAGAGCATGCATGGTCAAGGTGGCGCTCATAAAAATATTGCAAATTCAGTTCAGCAGAAGGATGAGAAATCAGCAGGACAAGGTTCTTGGGGTAAAAATGAGGCAGGGGCGACTCCAGTACCTGCAGAAAAAGTTAAAGCTGCTGCCAAAGCTGGCCTTGCTGCTGCTGCAATAAAAGCAAAATTGTTTGCTGATCATGAAGAACGGGAAATTCAGAGGTTATCTGCTAATATTGTAAATCATCAGTTGAAGAGATTGGAGCTGAAGTTAAAGCAGTTTGCAGAAGTGGAAACTTATCTAATGAAAGAATGTGAACAAGTGGAGAAGACAAGGCAGAGGATGGTTGCCGAACGTACCCGTCTTATATCAACTCGGTTTGGTGCTGCTGGAGTTGCTCCACCCATTAACTTAGCAGGTGTTGGTCCTTCCATGGCCAATAATAATTCTGGTAACAATAGGCAACAAATTATGCCATCTTCGGCTTCCCAGCCAAGCGTATCCGGATACAGCAACAGCCAACCAGTCCATTCTCACATGCCTTTCATGCCACAACAATCAATGCTAGGATTGGGACCGAGGATGCCATTGGCGTCCATACAAGCCTCCTCATCAGCTCCAAATGCCATGTTTAATTCCCCAGGGACTGGTCGGCCGACTCTAAGTCATCCGATGCTGAGGCCTGTACCGGGTACTAGCTCTGGTTTAGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000785 GO:0000790 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006325 GO:0006338 GO:0006996 GO:0008150 GO:0009987 GO:0016043 GO:0016514 GO:0031974 GO:0031981 GO:0032991 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0051276 GO:0070013 GO:0070603 GO:0071840 GO:1902494 GO:1904949

KEGG Pathways

Metabolic & Signaling

ko04714 ko05225 map04714 map05225

Pfam Domains

Protein Families

Myb_DNA-binding SWIRM SWIRM-assoc_1

Protein Analysis

632

Amino Acids

69.09

Weight (kDa)

6.3

Isoelectric Point (pI)

51.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SWIRM	PF04433	25 - 104	1.4e-19	SWIRM domain
Myb_DNA-binding	PF00249	241 - 283	3e-11	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	243 - 285	2.8e-08	Myb-like DNA-binding domain
SWIRM-assoc_1	PF16495	447 - 523	6.8e-25	SWIRM-associated region 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005880)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21700
fragaria_vesca	FvH4_2g27500 FvH4_2g27500 FvH4_2g27500 FvH4_2g27500 FvH4_2g27500
malus_domestica	MD00G1030000.v1.1 MD00G1041900.v1.1
prunus_persica	Prupe.1G492600_v2.0.a1 Prupe.1G492600_v2.0.a1 Prupe.1G492600_v2.0.a1
pyrus_communis	pycom116g00060 pycom15g30900
rosa_chinensis	RchiOBHm_Chr6g0296331
rosa_laevigata	RLG00000011705
rosa_multiflora	Rmu_co8413639.1_g000001 Rmu_sc0001478.1_g000003 Rmu_sc0014424.1_g000002 Rmu_sc0042048.1_g000001
rosa_roxburghii	Rroxscaffold_5G00346270 Rroxscaffold_7G00171620 Rroxscaffold_7G00178460
rosa_rugosa	Rorug06G0261200
rosa_samantha	Rh6AG372900 Rh6BG381000 Rh6CG386200 Rh6DG373700
rosa_wichuraiana	Rw6G032510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	471
AarI	CACCTGC	1 cut(s)	1592
Acc36I	ACCTGC	4 cut(s)	993, 1144, 1318, 1592
AccB1I	GGYRCC	1 cut(s)	109
AccB7I	CCANNNNNTGG	1 cut(s)	1832
AccII	CGCG	1 cut(s)	12
AccIII	TCCGGA	1 cut(s)	1688
AciI	CCGC	5 cut(s)	10, 12, 25, 321, 936
AclWI	GGATC	4 cut(s)	704, 966, 979, 1171
AcoI	YGGCCR	2 cut(s)	1620, 1838
AcsI	RAATTY	6 cut(s)	428, 525, 961, 1018, 1231, 1398
AcuI	CTGAAG	2 cut(s)	279, 1472
AcyI	GRCGYC	1 cut(s)	1778
AfaI	GTAC	8 cut(s)	158, 191, 615, 811, 1308, 1543, 1872, 1879
AfiI	CCNNNNNNNGG	6 cut(s)	344, 360, 447, 1142, 1832, 1874
AflII	CTTAAG	2 cut(s)	358, 452
AgsI	TTSAA	7 cut(s)	406, 666, 693, 884, 948, 954, 1438
AhdI	GACNNNNNGTC	1 cut(s)	1848
AjnI	CCWGG	2 cut(s)	1041, 1825
AluBI	AGCT	7 cut(s)	398, 461, 1328, 1340, 1450, 1802, 1884
AluI	AGCT	7 cut(s)	398, 461, 1328, 1340, 1450, 1802, 1884
Alw26I	GTCTC	2 cut(s)	94, 542
AlwI	GGATC	4 cut(s)	704, 966, 979, 1171
AlwNI	CAGNNNCTG	3 cut(s)	224, 1310, 1832
Aor13HI	TCCGGA	1 cut(s)	1688
ApoI	RAATTY	6 cut(s)	428, 525, 961, 1018, 1231, 1398
AspLEI	GCGC	2 cut(s)	826, 1214
AspS9I	GGNCC	4 cut(s)	658, 1070, 1610, 1760
AsuC2I	CCSGG	1 cut(s)	1875
AsuHPI	GGTGA	4 cut(s)	66, 126, 389, 1001
AsuII	TTCGAA	1 cut(s)	529
AvaII	GGWCC	2 cut(s)	1610, 1760
BaeGI	GKGCMC	1 cut(s)	1096
BaeI	ACNNNNGTAYC	2 cut(s)	1290, 1323
BalI	TGGCCA	1 cut(s)	1622
BamHI	GGATCC	1 cut(s)	971
BanI	GGYRCC	1 cut(s)	109
BbsI	GAAGAC	1 cut(s)	1520
BbvCI	CCTCAGC	1 cut(s)	1862
BccI	CCATC	7 cut(s)	255, 400, 710, 857, 980, 1522, 1669
BciT130I	CCWGG	2 cut(s)	1043, 1827
BciVI	GTATCC	2 cut(s)	1685, 1696
BclI	TGATCA	5 cut(s)	289, 423, 733, 928, 1381
BcnI	CCSGG	1 cut(s)	1875
BcoDI	GTCTC	2 cut(s)	94, 542
BfaI	CTAG	2 cut(s)	1751, 1881
BfmI	CTRYAG	2 cut(s)	81, 1311
BfoI	RGCGCY	1 cut(s)	1215
BfrI	CTTAAG	2 cut(s)	358, 452
BfuAI	ACCTGC	4 cut(s)	993, 1144, 1318, 1592
BfuI	GTATCC	2 cut(s)	1685, 1696
BglI	GCCNNNNNGGC	1 cut(s)	1055
Bme1390I	CCNGG	3 cut(s)	1043, 1827, 1875
Bme18I	GGWCC	2 cut(s)	1610, 1760
BmeRI	GACNNNNNGTC	1 cut(s)	1848
BmgT120I	GGNCC	4 cut(s)	658, 1070, 1610, 1760
BmiI	GGNNCC	5 cut(s)	51, 111, 973, 1007, 1761
BmrFI	CCNGG	3 cut(s)	1043, 1827, 1875
BmrI	ACTGGG	2 cut(s)	304, 573
BmsI	GCATC	5 cut(s)	97, 885, 1094, 1758, 1848
BmuI	ACTGGG	2 cut(s)	304, 573
BpiI	GAAGAC	1 cut(s)	1520
BpmI	CTGGAG	3 cut(s)	116, 1287, 1596
Bpu10I	CCTNAGC	2 cut(s)	333, 1862
Bpu14I	TTCGAA	1 cut(s)	529
BpuEI	CTTGAG	1 cut(s)	776
BpuMI	CCSGG	1 cut(s)	1875
BsaHI	GRCGYC	1 cut(s)	1778
BsaJI	CCNNGG	9 cut(s)	10, 338, 762, 1041, 1104, 1617, 1763, 1825, 1826
BsaWI	WCCGGW	1 cut(s)	1688
BsaXI	ACNNNNNCTCC	2 cut(s)	1439, 1469
Bsc4I	CCNNNNNNNGG	6 cut(s)	344, 360, 447, 1142, 1832, 1874
Bse118I	RCCGGY	1 cut(s)	76
Bse1I	ACTGG	8 cut(s)	99, 299, 579, 788, 1031, 1304, 1709, 1837
Bse3DI	GCAATG	2 cut(s)	550, 833
BseAI	TCCGGA	1 cut(s)	1688
BseBI	CCWGG	2 cut(s)	1043, 1827
BseDI	CCNNGG	9 cut(s)	10, 338, 762, 1041, 1104, 1617, 1763, 1825, 1826
BseGI	GGATG	7 cut(s)	868, 905, 1185, 1255, 1533, 1773, 1852
BseLI	CCNNNNNNNGG	6 cut(s)	344, 360, 447, 1142, 1832, 1874
BseMI	GCAATG	2 cut(s)	550, 833
BseMII	CTCAG	5 cut(s)	138, 141, 324, 1110, 1853
BseNI	ACTGG	8 cut(s)	99, 299, 579, 788, 1031, 1304, 1709, 1837
BseRI	GAGGAG	2 cut(s)	380, 1783
BseSI	GKGCMC	1 cut(s)	1096
BseX3I	CGGCCG	1 cut(s)	1838
BseYI	CCCAGC	1 cut(s)	1674
Bsh1236I	CGCG	1 cut(s)	12
Bsh1285I	CGRYCG	1 cut(s)	1841
BshNI	GGYRCC	1 cut(s)	109
BsiEI	CGRYCG	1 cut(s)	1841
BsiSI	CCGG	3 cut(s)	77, 1689, 1874
BslFI	GGGAC	3 cut(s)	1024, 1773, 1843
BslI	CCNNNNNNNGG	6 cut(s)	344, 360, 447, 1142, 1832, 1874
BsmAI	GTCTC	2 cut(s)	94, 542
BsmBI	CGTCTC	1 cut(s)	542
BsmFI	GGGAC	3 cut(s)	1024, 1773, 1843
Bsp119I	TTCGAA	1 cut(s)	529
Bsp1286I	GDGCHC	1 cut(s)	1096
Bsp13I	TCCGGA	1 cut(s)	1688
Bsp1407I	TGTACA	1 cut(s)	156
Bsp143I	GATC	8 cut(s)	289, 423, 709, 733, 928, 971, 1163, 1381
Bsp19I	CCATGG	2 cut(s)	762, 1617
BspACI	CCGC	5 cut(s)	10, 12, 25, 321, 936
BspCNI	CTCAG	5 cut(s)	137, 142, 325, 1111, 1854
BspEI	TCCGGA	1 cut(s)	1688
BspFNI	CGCG	1 cut(s)	12
BspHI	TCATGA	2 cut(s)	487, 1384
BspLI	GGNNCC	5 cut(s)	51, 111, 973, 1007, 1761
BspMAI	CTGCAG	1 cut(s)	1315
BspMI	ACCTGC	4 cut(s)	993, 1144, 1318, 1592
BspPI	GGATC	4 cut(s)	704, 966, 979, 1171
BspT104I	TTCGAA	1 cut(s)	529
BspT107I	GGYRCC	1 cut(s)	109
BspTI	CTTAAG	2 cut(s)	358, 452
BsrDI	GCAATG	2 cut(s)	550, 833
BsrFI	RCCGGY	1 cut(s)	76
BsrGI	TGTACA	1 cut(s)	156
BsrI	ACTGG	8 cut(s)	99, 299, 579, 788, 1031, 1304, 1709, 1837
BssAI	RCCGGY	1 cut(s)	76
BssECI	CCNNGG	9 cut(s)	10, 338, 762, 1041, 1104, 1617, 1763, 1825, 1826
BssMI	GATC	8 cut(s)	289, 423, 709, 733, 928, 971, 1163, 1381
BssNI	GRCGYC	1 cut(s)	1778
BssT1I	CCWWGG	4 cut(s)	338, 762, 1104, 1617
Bst2UI	CCWGG	2 cut(s)	1043, 1827
Bst4CI	ACNGT	2 cut(s)	85, 220
Bst6I	CTCTTC	4 cut(s)	203, 579, 1066, 1433
BstACI	GRCGYC	1 cut(s)	1778
BstAFI	CTTAAG	2 cut(s)	358, 452
BstAPI	GCANNNNNTGC	1 cut(s)	1091
BstAUI	TGTACA	1 cut(s)	156
BstBI	TTCGAA	1 cut(s)	529
BstC8I	GCNNGC	4 cut(s)	60, 869, 1196, 1342
BstDEI	CTNAG	7 cut(s)	124, 150, 333, 1119, 1597, 1847, 1862
BstDSI	CCRYGG	3 cut(s)	10, 762, 1617
BstENI	CCTNNNNNAGG	1 cut(s)	358
BstF5I	GGATG	7 cut(s)	868, 905, 1185, 1255, 1533, 1773, 1852
BstFNI	CGCG	1 cut(s)	12
BstH2I	RGCGCY	1 cut(s)	1215
BstHHI	GCGC	2 cut(s)	826, 1214
BstKTI	GATC	8 cut(s)	292, 426, 712, 736, 931, 974, 1166, 1384
BstMAI	GTCTC	2 cut(s)	94, 542
BstMBI	GATC	8 cut(s)	289, 423, 709, 733, 928, 971, 1163, 1381
BstMCI	CGRYCG	1 cut(s)	1841
BstNI	CCWGG	2 cut(s)	1043, 1827
BstNSI	RCATGY	4 cut(s)	163, 806, 1198, 1726
BstSCI	CCNGG	3 cut(s)	1041, 1825, 1873
BstSFI	CTRYAG	2 cut(s)	81, 1311
BstSLI	GKGCMC	1 cut(s)	1096
BstUI	CGCG	1 cut(s)	12
BstV2I	GAAGAC	1 cut(s)	1520
BstX2I	RGATCY	1 cut(s)	971
BstXI	CCANNNNNNTGG	1 cut(s)	193
BstYI	RGATCY	1 cut(s)	971
BstZI	CGGCCG	1 cut(s)	1838
BsuI	GTATCC	2 cut(s)	1685, 1696
BtgI	CCRYGG	3 cut(s)	10, 762, 1617
BtsCI	GGATG	7 cut(s)	868, 905, 1185, 1255, 1533, 1773, 1852
BtsI	GCAGTG	1 cut(s)	1116
BtsIMutI	CAGTG	4 cut(s)	90, 292, 586, 1116
BveI	ACCTGC	4 cut(s)	993, 1144, 1318, 1592
Cac8I	GCNNGC	4 cut(s)	60, 869, 1196, 1342
CaiI	CAGNNNCTG	3 cut(s)	224, 1310, 1832
CciI	TCATGA	2 cut(s)	487, 1384
CfoI	GCGC	2 cut(s)	826, 1214
Cfr10I	RCCGGY	1 cut(s)	76
Cfr13I	GGNCC	4 cut(s)	658, 1070, 1610, 1760
Cfr42I	CCGCGG	1 cut(s)	13
CseI	GACGC	1 cut(s)	1767
Csp6I	GTAC	8 cut(s)	157, 190, 614, 810, 1307, 1542, 1871, 1878
CviQI	GTAC	8 cut(s)	157, 190, 614, 810, 1307, 1542, 1871, 1878
DdeI	CTNAG	7 cut(s)	124, 150, 333, 1119, 1597, 1847, 1862
DpnI	GATC	8 cut(s)	291, 425, 711, 735, 930, 973, 1165, 1383
DpnII	GATC	8 cut(s)	289, 423, 709, 733, 928, 971, 1163, 1381
DriI	GACNNNNNGTC	1 cut(s)	1848
EaeI	YGGCCR	2 cut(s)	1620, 1838
EagI	CGGCCG	1 cut(s)	1838
Eam1104I	CTCTTC	4 cut(s)	203, 579, 1066, 1433
Eam1105I	GACNNNNNGTC	1 cut(s)	1848
EarI	CTCTTC	4 cut(s)	203, 579, 1066, 1433
EciI	GGCGGA	1 cut(s)	951
EclXI	CGGCCG	1 cut(s)	1838
Eco130I	CCWWGG	4 cut(s)	338, 762, 1104, 1617
Eco147I	AGGCCT	1 cut(s)	1867
Eco47I	GGWCC	2 cut(s)	1610, 1760
Eco52I	CGGCCG	1 cut(s)	1838
Eco57I	CTGAAG	2 cut(s)	279, 1472
EcoNI	CCTNNNNNAGG	1 cut(s)	358
EcoRI	GAATTC	2 cut(s)	525, 961
EcoRII	CCWGG	2 cut(s)	1041, 1825
EcoT14I	CCWWGG	4 cut(s)	338, 762, 1104, 1617
EcoT22I	ATGCAT	2 cut(s)	833, 1200
ErhI	CCWWGG	4 cut(s)	338, 762, 1104, 1617
Esp3I	CGTCTC	1 cut(s)	542
FalI	AAGNNNNNCTT	2 cut(s)	1329, 1361
FaqI	GGGAC	3 cut(s)	1024, 1773, 1843
FbaI	TGATCA	5 cut(s)	289, 423, 733, 928, 1381
FokI	GGATG	7 cut(s)	875, 892, 1192, 1262, 1540, 1780, 1839
FspBI	CTAG	2 cut(s)	1751, 1881
GlaI	GCGC	2 cut(s)	825, 1213
GsaI	CCCAGC	1 cut(s)	1678
GsuI	CTGGAG	3 cut(s)	116, 1287, 1596
HaeII	RGCGCY	1 cut(s)	1215
HapII	CCGG	3 cut(s)	77, 1689, 1874
HgaI	GACGC	1 cut(s)	1767
HhaI	GCGC	2 cut(s)	826, 1214
Hin1I	GRCGYC	1 cut(s)	1778
Hin6I	GCGC	2 cut(s)	824, 1212
HinP1I	GCGC	2 cut(s)	824, 1212
HinfI	GANTC	8 cut(s)	268, 382, 689, 992, 1027, 1077, 1300, 1843
HpaII	CCGG	3 cut(s)	77, 1689, 1874
HphI	GGTGA	4 cut(s)	66, 126, 389, 1001
Hpy166II	GTNNAC	2 cut(s)	144, 1502
Hpy188I	TCNGA	8 cut(s)	226, 423, 511, 628, 997, 1120, 1404, 1857
Hpy8I	GTNNAC	2 cut(s)	144, 1502
Hpy99I	CGWCG	1 cut(s)	497
HpyAV	CCTTC	4 cut(s)	595, 1154, 1240, 1623
HpyCH4III	ACNGT	2 cut(s)	85, 220
HpyCH4IV	ACGT	3 cut(s)	535, 847, 1540
HpyF3I	CTNAG	7 cut(s)	124, 150, 333, 1119, 1597, 1847, 1862
HpySE526I	ACGT	3 cut(s)	535, 847, 1540
Hsp92I	GRCGYC	1 cut(s)	1778
HspAI	GCGC	2 cut(s)	824, 1212
Kpn2I	TCCGGA	1 cut(s)	1688
Ksp22I	TGATCA	5 cut(s)	289, 423, 733, 928, 1381
KspI	CCGCGG	1 cut(s)	13
Kzo9I	GATC	8 cut(s)	289, 423, 709, 733, 928, 971, 1163, 1381
LmnI	GCTCC	4 cut(s)	367, 1447, 1588, 1807
LweI	GCATC	5 cut(s)	97, 885, 1094, 1758, 1848
MaeI	CTAG	2 cut(s)	1751, 1881
MaeII	ACGT	3 cut(s)	535, 847, 1540
MaeIII	GTNAC	2 cut(s)	594, 1637
MalI	GATC	8 cut(s)	291, 425, 711, 735, 930, 973, 1165, 1383
MboI	GATC	8 cut(s)	289, 423, 709, 733, 928, 971, 1163, 1381
MboII	GAAGA	9 cut(s)	220, 272, 566, 657, 1053, 1400, 1450, 1525, 1656
MflI	RGATCY	1 cut(s)	971
MhlI	GDGCHC	1 cut(s)	1096
MlsI	TGGCCA	1 cut(s)	1622
MluNI	TGGCCA	1 cut(s)	1622
MlyI	GAGTC	4 cut(s)	262, 1086, 1294, 1837
MmeI	TCCRAC	1 cut(s)	933
Mox20I	TGGCCA	1 cut(s)	1622
Mph1103I	ATGCAT	2 cut(s)	833, 1200
MroI	TCCGGA	1 cut(s)	1688
MscI	TGGCCA	1 cut(s)	1622
MseI	TTAA	7 cut(s)	239, 359, 453, 1323, 1457, 1593, 1818
MslI	CAYNNNNRTG	1 cut(s)	683
Msp20I	TGGCCA	1 cut(s)	1622
MspA1I	CMGCKG	3 cut(s)	12, 398, 461
MspCI	CTTAAG	2 cut(s)	358, 452
MspI	CCGG	3 cut(s)	77, 1689, 1874
MspR9I	CCNGG	3 cut(s)	1043, 1827, 1875
MvaI	CCWGG	2 cut(s)	1043, 1827
MvnI	CGCG	1 cut(s)	12
NciI	CCSGG	1 cut(s)	1875
NcoI	CCATGG	2 cut(s)	762, 1617
NdeII	GATC	8 cut(s)	289, 423, 709, 733, 928, 971, 1163, 1381
NlaIV	GGNNCC	5 cut(s)	51, 111, 973, 1007, 1761
NmuCI	GTSAC	1 cut(s)	594
NsiI	ATGCAT	2 cut(s)	833, 1200
NspI	RCATGY	4 cut(s)	163, 806, 1198, 1726
NspV	TTCGAA	1 cut(s)	529
PaeI	GCATGC	1 cut(s)	1198
PagI	TCATGA	2 cut(s)	487, 1384
PaqCI	CACCTGC	1 cut(s)	1592
PasI	CCCWGGG	1 cut(s)	1826
PceI	AGGCCT	1 cut(s)	1867
PfeI	GAWTC	4 cut(s)	382, 689, 992, 1027
PflMI	CCANNNNNTGG	1 cut(s)	1832
PleI	GAGTC	4 cut(s)	262, 1085, 1294, 1837
PpsI	GAGTC	4 cut(s)	262, 1085, 1294, 1837
PsiI	TTATAA	1 cut(s)	471
Psp6I	CCWGG	2 cut(s)	1041, 1825
PspFI	CCCAGC	1 cut(s)	1674
PspGI	CCWGG	2 cut(s)	1041, 1825
PspN4I	GGNNCC	5 cut(s)	51, 111, 973, 1007, 1761
PspPI	GGNCC	4 cut(s)	658, 1070, 1610, 1760
PstI	CTGCAG	1 cut(s)	1315
PstNI	CAGNNNCTG	3 cut(s)	224, 1310, 1832
PsuI	RGATCY	1 cut(s)	971
PvuII	CAGCTG	2 cut(s)	398, 461
RsaI	GTAC	8 cut(s)	158, 191, 615, 811, 1308, 1543, 1872, 1879
RsaNI	GTAC	8 cut(s)	157, 190, 614, 810, 1307, 1542, 1871, 1878
RseI	CAYNNNNRTG	1 cut(s)	683
SacII	CCGCGG	1 cut(s)	13
SaqAI	TTAA	7 cut(s)	239, 359, 453, 1323, 1457, 1593, 1818
Sau3AI	GATC	8 cut(s)	289, 423, 709, 733, 928, 971, 1163, 1381
Sau96I	GGNCC	4 cut(s)	658, 1070, 1610, 1760
SchI	GAGTC	4 cut(s)	262, 1086, 1294, 1837
ScrFI	CCNGG	3 cut(s)	1043, 1827, 1875
SduI	GDGCHC	1 cut(s)	1096
SfaNI	GCATC	5 cut(s)	97, 885, 1094, 1758, 1848
SfcI	CTRYAG	2 cut(s)	81, 1311
Sfr303I	CCGCGG	1 cut(s)	13
SfuI	TTCGAA	1 cut(s)	529
SgrBI	CCGCGG	1 cut(s)	13
SinI	GGWCC	2 cut(s)	1610, 1760
SmiMI	CAYNNNNRTG	1 cut(s)	683
SmlI	CTYRAG	3 cut(s)	358, 452, 755
SmoI	CTYRAG	3 cut(s)	358, 452, 755
SphI	GCATGC	1 cut(s)	1198
SseBI	AGGCCT	1 cut(s)	1867
SsiI	CCGC	5 cut(s)	10, 12, 25, 321, 936
SspI	AATATT	3 cut(s)	880, 1225, 1420
SspMI	CTAG	2 cut(s)	1751, 1881
StuI	AGGCCT	1 cut(s)	1867
StyD4I	CCNGG	3 cut(s)	1041, 1825, 1873
StyI	CCWWGG	4 cut(s)	338, 762, 1104, 1617
TaaI	ACNGT	2 cut(s)	85, 220
TaiI	ACGT	3 cut(s)	538, 850, 1543
TaqI	TCGA	4 cut(s)	91, 271, 410, 529
TaqII	GACCGA	1 cut(s)	1777
TatI	WGTACW	3 cut(s)	156, 189, 613
TauI	GCSGC	3 cut(s)	12, 15, 323
TfiI	GAWTC	4 cut(s)	382, 689, 992, 1027
Tru1I	TTAA	7 cut(s)	239, 359, 453, 1323, 1457, 1593, 1818
Tru9I	TTAA	7 cut(s)	239, 359, 453, 1323, 1457, 1593, 1818
TscAI	CASTG	4 cut(s)	90, 299, 586, 1116
TseFI	GTSAC	1 cut(s)	594
Tsp45I	GTSAC	1 cut(s)	594
TspRI	CASTG	4 cut(s)	90, 299, 586, 1116
Van91I	CCANNNNNTGG	1 cut(s)	1832
Vha464I	CTTAAG	2 cut(s)	358, 452
VpaK11BI	GGWCC	2 cut(s)	1610, 1760
XagI	CCTNNNNNAGG	1 cut(s)	358
XapI	RAATTY	6 cut(s)	428, 525, 961, 1018, 1231, 1398
XceI	RCATGY	4 cut(s)	163, 806, 1198, 1726
XspI	CTAG	2 cut(s)	1751, 1881
Zsp2I	ATGCAT	2 cut(s)	833, 1200

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.