pycom11g05990

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Forward (+)
4602324 .. 4608209
5886 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 243 bp
ATGGGATTTGGAGGTACTCGGTTGTGCGTATGTCTCTTGCTTGCCTTCGCTGTAATTTCTTCTGCTCAGAACACCGTTCTATTCTCAGATGATGAGGTGGTAATGGCAATGGAGATGGAGGGTAGGTCTTTGAGGGTGACGACAAACGACTACGACGACCCGACTGCAAATCGTGGGCACGATCCCTCCGCCTTCGCCTCCTCAAGGGTCAAGTCTGGCGGTGGAGGTGGCCGAAAAGGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

81

Amino Acids

8.39

Weight (kDa)

5.63

Isoelectric Point (pI)

33.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 189, 219
AclWI GGATC 1 cut(s) 176
AcoI YGGCCR 1 cut(s) 229
AfaI GTAC 1 cut(s) 16
AfiI CCNNNNNNNGG 1 cut(s) 204
Alw26I GTCTC 1 cut(s) 38
AlwI GGATC 1 cut(s) 176
AoxI GGCC 1 cut(s) 229
AsuHPI GGTGA 1 cut(s) 148
BaeGI GKGCMC 1 cut(s) 180
BccI CCATC 1 cut(s) 109
BcgI CGANNNNNNTGC 2 cut(s) 146, 180
BcoDI GTCTC 1 cut(s) 38
BglI GCCNNNNNGGC 1 cut(s) 237
BpuEI CTTGAG 1 cut(s) 187
BsaXI ACNNNNNCTCC 4 cut(s) 110, 140, 170, 200
Bsc4I CCNNNNNNNGG 1 cut(s) 204
Bse3DI GCAATG 1 cut(s) 114
BseLI CCNNNNNNNGG 1 cut(s) 204
BseMI GCAATG 1 cut(s) 114
BseMII CTCAG 2 cut(s) 80, 99
BseRI GAGGAG 1 cut(s) 190
BseSI GKGCMC 1 cut(s) 180
BshFI GGCC 1 cut(s) 231
BslI CCNNNNNNNGG 1 cut(s) 204
BsmAI GTCTC 1 cut(s) 38
BsnI GGCC 1 cut(s) 231
Bsp1286I GDGCHC 1 cut(s) 180
Bsp143I GATC 1 cut(s) 181
BspACI CCGC 2 cut(s) 189, 219
BspANI GGCC 1 cut(s) 231
BspCNI CTCAG 2 cut(s) 79, 98
BspPI GGATC 1 cut(s) 176
BsrDI GCAATG 1 cut(s) 114
BssMI GATC 1 cut(s) 181
Bst4CI ACNGT 1 cut(s) 76
BstC8I GCNNGC 1 cut(s) 42
BstDEI CTNAG 2 cut(s) 66, 85
BstENI CCTNNNNNAGG 1 cut(s) 202
BstKTI GATC 1 cut(s) 184
BstMAI GTCTC 1 cut(s) 38
BstMBI GATC 1 cut(s) 181
BstMWI GCNNNNNNNGC 1 cut(s) 237
BstSLI GKGCMC 1 cut(s) 180
BsuRI GGCC 1 cut(s) 231
Cac8I GCNNGC 1 cut(s) 42
Csp6I GTAC 1 cut(s) 15
CviJI RGCY 2 cut(s) 231, 240
CviKI_1 RGCY 2 cut(s) 231, 240
CviQI GTAC 1 cut(s) 15
DdeI CTNAG 2 cut(s) 66, 85
DpnI GATC 1 cut(s) 183
DpnII GATC 1 cut(s) 181
EaeI YGGCCR 1 cut(s) 229
EciI GGCGGA 1 cut(s) 178
EcoNI CCTNNNNNAGG 1 cut(s) 202
FaiI YATR 1 cut(s) 31
HaeIII GGCC 1 cut(s) 231
HphI GGTGA 1 cut(s) 148
Hpy188I TCNGA 2 cut(s) 69, 88
Hpy99I CGWCG 1 cut(s) 158
HpyAV CCTTC 2 cut(s) 55, 202
HpyCH4III ACNGT 1 cut(s) 76
HpyCH4V TGCA 1 cut(s) 167
HpyF10VI GCNNNNNNNGC 1 cut(s) 237
HpyF3I CTNAG 2 cut(s) 66, 85
Kzo9I GATC 1 cut(s) 181
LpnPI CCDG 1 cut(s) 201
MaeIII GTNAC 1 cut(s) 136
MalI GATC 1 cut(s) 183
MboI GATC 1 cut(s) 181
MboII GAAGA 1 cut(s) 51
MhlI GDGCHC 1 cut(s) 180
MluCI AATT 1 cut(s) 54
MnlI CCTC 8 cut(s) 5, 88, 112, 126, 196, 208, 211, 218
MwoI GCNNNNNNNGC 1 cut(s) 237
NdeII GATC 1 cut(s) 181
NmuCI GTSAC 1 cut(s) 136
PcsI WCGNNNNNNNCGW 1 cut(s) 153
RsaI GTAC 1 cut(s) 16
RsaNI GTAC 1 cut(s) 15
Sau3AI GATC 1 cut(s) 181
SduI GDGCHC 1 cut(s) 180
SetI ASST 4 cut(s) 16, 99, 128, 229
SgeI CNNG 9 cut(s) 30, 49, 53, 172, 185, 191, 216, 223, 228
SmlI CTYRAG 1 cut(s) 202
SmoI CTYRAG 1 cut(s) 202
Sse9I AATT 1 cut(s) 54
SsiI CCGC 2 cut(s) 189, 219
TaaI ACNGT 1 cut(s) 76
TasI AATT 1 cut(s) 54
TseFI GTSAC 1 cut(s) 136
Tsp45I GTSAC 1 cut(s) 136
XagI CCTNNNNNAGG 1 cut(s) 202
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.