pycom11g06060
ERF Family

Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0010747
Physical Location & Seq
Reverse (-)
4673597 .. 4676495
2899 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2160 bp
ATGAAGTGTTTACGAAGCTTTTGCTTCGGTTTTCGACGATTGAGAAGGATTGGGATCTTCATCTTCTTCCCATTACTTCTTCTAAAGCTTCAATGGAAGGAGTTTACTCGAAATCGAGGGAAGTATGAGCAAGAAGCTGCTTCTGTTCTGAAAATAGGATCAACTATTTCAGCAGCTGATCAGTGGTCAGCTAGCTTGCCTTCTTGGTTGCAAACGCGTGAACTTGACACTGGCAAGGGAGACGGAGACGATCTAGCAAAGACCAAAGACGATAAGACAACAATGAATGCTACAGTATCTGCACTGCAGAAAAAATGGGATGATATCTGCCGACAAAATCATCACTCTCAACCATTCCCTAAAGTGGACGTTTATCAAGCAGGGCCTCAAGTTGCATCTGCTGAGGGCTCCCTAGCTGTCTGGGATAGAAAAGAAAACAGCGGTGAAGATTCATCTCTAAATGAAAGCGGATGTGCTATTCATTATCGCTGCCAGCCGATGGACATGCAAACGAGTCTTCTATCAAAACAGAACTTGCCTACGCAAGTAGTTTCTGAGGCTGCTGAGAATGCTAGCCTCCGGTCAGAGCTATTGGTTAAAGTTTCGAAGGGTCAGCAAGTTGAAATGAGAAGCCCCTGCCGGACTACTTACCCCATCCACAATATGAATCTTTCCACCGACCACACATCATCTTCGTCGGTTACTTCTGTAGCAACAGATTTGGGATTGGGAACATTGTATGGATCAACCAGTCAAGGGCCAAGAAGTCCTAAATTACAAGATATTAGAGAGAGTTCCAGACACCTCTCTGGTTCCATTTCTGCTGAATTTGATGCATTGAGTGAAAATAGTTCACGCCATATTGCCCAGTCCTCTTCCTGCTCTGCGTCTGATCTTGGAGGGCAGGTTGATCCAAGCGATATCAAATCACTTAGGAGAGTTCTCACAGAAAAGGTTGGCTGGCAAAATGAAGCCATTTGCGGTATCAGTCAAGCTGTGGCACGTTGCAAGTCTGGTGGTGGAAGGAATCAGTGTTCGAAACTCAGAGGAGATATATGGCTGACTTTGGTTGGACCTGACAAAGTTGGAAAGAAGAAAATTGCTTTAGCACTTGCTGAGATACTTTTTGGCTCCAGAGAAAGCTTAATTTCTGTTGATCTGTGTTCCCAAGATAGGGGTTACCAATCAAACTCTGTTTTTCAATCTGAAGGTGTCGATGATTACAATGTGAAGTTTAGGGGTAAGACAGTTGTTGATTATGTTGCAGGGGAGTTAAGCAGGAGACCTCATTCAGTGGTTTTCCTTGAAAATGTCGATAAGGCGGACTTTCTTGCCCAGAGTAGTTTGTCCCAGGCCATTAGGACCGGAAGGTTTCCAGATTCGCATGGGAGAGAAATCAGCATTAACGACATAATCTTCGTGACTACCTCCACTATCAAAAGCAGCAGCAAAAGCCTCTCTGGAGAGAATGAACCCCATAAATTCTCTGAGGAGGTCATACTTGCCGCCAAGAAATGTCAAATGCAAATTTGGAATCTTGGGGATGCCAACCAAAGCAAGGGCATGAATGTGAGGATTGCACCAAGAGATGGAACCTCGAACCCGTCTTCTTCTACAAATAAAAGAAAGCTGATTGACACCAATGCCTCCTTAGAGCAATCCTCTGAACTACAGAAACGGTCCAACAAGCAATTAAGGAACTTTCTCGATTTGAATCTGCCAGTAGCGGAGCCAGACAAGAACATAGATTCTGAAGATTGTGACAGCGACAACATCTCCGAAAACTCTAAAGCTTGGCTGGAAGATTTCCTTGGTCAAGTGGACGAAAAAGTGGTTTTGAAGCCATTTGATTTTGAAGCACTTGCTGAGAAAATAGTGAAGGAAATCAATCGCGAATTGAAGAAAATCTTCGGATATGAGGTTCAGCTGGAGATTGATTTCGGAGTCATGGTGCAGATACTCGCAGCTGGCTGGTTATCGGACAAGAAGAAAGCCGTAGAGGAGTGGGTCGAACAAGTTCTCAGCAGAAGCTTTGTCGAAGCACACCAGAAGTTCCATCTCACTGCTCATTCTGTAATAAAATTGGCTGCTGCTGGAACCCTTTCTGTCGACGAACAAGCTCCCGGCGTTTGCCTTCCTGCTCGAATTGGTCTAGGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009719 GO:0009725 GO:0010033 GO:0014070 GO:0033993 GO:0042221 GO:0050896 GO:1901700 GO:1902347
KEGG Pathways
Metabolic & Signaling
ko04213 map04213
Pfam Domains
Protein Families
AAA_2 Clp_N

Protein Analysis

720

Amino Acids

79.31

Weight (kDa)

6.9

Isoelectric Point (pI)

44.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA_2 PF07724 355 - 491 8.7e-15 AAA domain (Cdc48 subfamily)
AAA_lid_SMAX1 PF26587 617 - 698 7.9e-30 SMAX1-like, AAA+ ATPase lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010747)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07200 AT1G07200 AT2G29970
fragaria_vesca FvH4_3g38740
malus_domestica MD03G1068500.v1.1 MD11G1072900.v1.1
prunus_persica Prupe.6G056400_v2.0.a1
pyrus_communis pycom03g05500 pycom11g06060
rosa_chinensis RchiOBHm_Chr5g0069891
rosa_laevigata RLG00000036105
rosa_multiflora Rmu_co8209630.1_g000001 Rmu_sc0030143.1_g000001
rosa_roxburghii Rroxscaffold_1G00011170
rosa_rugosa Rorug05G0400500
rosa_samantha Rh5AG457600 Rh5BG476400 Rh5CG500200 Rh5DG488300
rosa_wichuraiana Rw5G042720

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 895
AccB7I CCANNNNNTGG 2 cut(s) 499, 1589
AccI GTMKAC 1 cut(s) 2109
AccII CGCG 2 cut(s) 217, 1893
AciI CCGC 6 cut(s) 441, 468, 981, 1322, 1506, 1727
AclWI GGATC 4 cut(s) 62, 166, 751, 905
AcsI RAATTY 3 cut(s) 827, 1481, 1527
AcuI CTGAAG 2 cut(s) 1227, 1773
AfiI CCNNNNNNNGG 7 cut(s) 364, 499, 756, 1173, 1174, 1558, 1589
AflIII ACRYGT 1 cut(s) 215
AgsI TTSAA 8 cut(s) 92, 623, 1202, 1307, 1714, 1840, 1856, 1900
AjnI CCWGG 1 cut(s) 1350
AjuI GAANNNNNNNTTGG 2 cut(s) 1794, 1826
AloI GAACNNNNNNTCC 4 cut(s) 1018, 1050, 1905, 1937
Alw26I GTCTC 3 cut(s) 234, 240, 1276
AlwI GGATC 4 cut(s) 62, 166, 751, 905
AlwNI CAGNNNCTG 2 cut(s) 176, 299
AoxI GGCC 3 cut(s) 383, 758, 1353
ApeKI GCWGC 9 cut(s) 137, 173, 489, 560, 1443, 1446, 1964, 2087, 2090
ApoI RAATTY 3 cut(s) 827, 1481, 1527
ArsI GACNNNNNNTTYG 2 cut(s) 1400, 1432
Asp700I GAANNNNTTC 3 cut(s) 1907, 2016, 2101
AspS9I GGNCC 5 cut(s) 383, 758, 1073, 1362, 1680
AsuC2I CCSGG 1 cut(s) 2124
AsuHPI GGTGA 1 cut(s) 455
AsuII TTCGAA 2 cut(s) 605, 1037
AsuNHI GCTAGC 2 cut(s) 191, 572
AvaII GGWCC 3 cut(s) 1073, 1362, 1680
BanII GRGCYC 1 cut(s) 410
BbsI GAAGAC 2 cut(s) 509, 1599
BbvCI CCTCAGC 1 cut(s) 402
BbvI GCAGC 9 cut(s) 124, 185, 476, 547, 1455, 1458, 1976, 2074, 2077
BccI CCATC 4 cut(s) 493, 662, 1583, 2064
BceAI ACGGC 1 cut(s) 1979
BcgI CGANNNNNNTGC 3 cut(s) 37, 487, 521
BciT130I CCWGG 1 cut(s) 1352
BclI TGATCA 1 cut(s) 178
BcnI CCSGG 1 cut(s) 2124
BcoDI GTCTC 3 cut(s) 234, 240, 1276
BfaI CTAG 5 cut(s) 192, 254, 413, 573, 2153
BfmI CTRYAG 4 cut(s) 291, 305, 708, 1670
BfuAI ACCTGC 1 cut(s) 895
Bme1390I CCNGG 2 cut(s) 1352, 2124
Bme18I GGWCC 3 cut(s) 1073, 1362, 1680
BmgT120I GGNCC 5 cut(s) 383, 758, 1073, 1362, 1680
BmiI GGNNCC 6 cut(s) 409, 814, 1132, 1594, 1731, 2098
BmrFI CCNGG 2 cut(s) 1352, 2124
BmrI ACTGGG 1 cut(s) 862
BmsI GCATC 3 cut(s) 404, 823, 1534
BmtI GCTAGC 2 cut(s) 195, 576
BmuI ACTGGG 1 cut(s) 862
BpiI GAAGAC 2 cut(s) 509, 1599
BplI GAGNNNNNCTC 2 cut(s) 1646, 1678
BpmI CTGGAG 3 cut(s) 1117, 1482, 1949
Bpu10I CCTNAGC 1 cut(s) 402
Bpu14I TTCGAA 2 cut(s) 605, 1037
BpuEI CTTGAG 1 cut(s) 372
BpuMI CCSGG 1 cut(s) 2124
BsaBI GATNNNNATC 3 cut(s) 53, 59, 1713
BsaI GGTCTC 1 cut(s) 1276
BsaJI CCNNGG 2 cut(s) 1350, 1810
BsaWI WCCGGW 2 cut(s) 579, 1364
BsaXI ACNNNNNCTCC 6 cut(s) 891, 921, 1760, 1790, 1935, 1965
Bsc4I CCNNNNNNNGG 7 cut(s) 364, 499, 756, 1173, 1174, 1558, 1589
Bse1I ACTGG 4 cut(s) 235, 750, 868, 1721
Bse8I GATNNNNATC 3 cut(s) 53, 59, 1713
BseBI CCWGG 1 cut(s) 1352
BseDI CCNNGG 2 cut(s) 1350, 1810
BseGI GGATG 4 cut(s) 325, 476, 654, 1549
BseJI GATNNNNATC 3 cut(s) 53, 59, 1713
BseLI CCNNNNNNNGG 7 cut(s) 364, 499, 756, 1173, 1174, 1558, 1589
BseMII CTCAG 8 cut(s) 393, 546, 555, 1057, 1107, 1479, 1857, 2035
BseNI ACTGG 4 cut(s) 235, 750, 868, 1721
BseRI GAGGAG 3 cut(s) 1062, 1505, 2015
BseXI GCAGC 9 cut(s) 124, 185, 476, 547, 1455, 1458, 1976, 2074, 2077
BsgI GTGCAG 2 cut(s) 285, 1973
Bsh1236I CGCG 2 cut(s) 217, 1893
BshFI GGCC 3 cut(s) 385, 760, 1355
BsiSI CCGG 4 cut(s) 580, 640, 1365, 2124
BslFI GGGAC 1 cut(s) 1333
BslI CCNNNNNNNGG 7 cut(s) 364, 499, 756, 1173, 1174, 1558, 1589
BsmAI GTCTC 3 cut(s) 234, 240, 1276
BsmBI CGTCTC 2 cut(s) 234, 240
BsmFI GGGAC 1 cut(s) 1333
BsmI GAATGC 2 cut(s) 292, 574
BsnI GGCC 3 cut(s) 385, 760, 1355
Bso31I GGTCTC 1 cut(s) 1276
Bsp119I TTCGAA 2 cut(s) 605, 1037
Bsp1286I GDGCHC 1 cut(s) 410
Bsp143I GATC 8 cut(s) 54, 158, 178, 250, 743, 892, 910, 1156
Bsp68I TCGCGA 1 cut(s) 1893
BspACI CCGC 6 cut(s) 441, 468, 981, 1322, 1506, 1727
BspANI GGCC 3 cut(s) 385, 760, 1355
BspCNI CTCAG 8 cut(s) 394, 547, 556, 1056, 1108, 1480, 1858, 2034
BspFNI CGCG 2 cut(s) 217, 1893
BspLI GGNNCC 6 cut(s) 409, 814, 1132, 1594, 1731, 2098
BspMAI CTGCAG 1 cut(s) 309
BspMI ACCTGC 1 cut(s) 895
BspOI GCTAGC 2 cut(s) 195, 576
BspPI GGATC 4 cut(s) 62, 166, 751, 905
BspT104I TTCGAA 2 cut(s) 605, 1037
BspTNI GGTCTC 1 cut(s) 1276
BsrI ACTGG 4 cut(s) 235, 750, 868, 1721
BssECI CCNNGG 2 cut(s) 1350, 1810
BssMI GATC 8 cut(s) 54, 158, 178, 250, 743, 892, 910, 1156
BssT1I CCWWGG 1 cut(s) 1810
Bst2UI CCWGG 1 cut(s) 1352
Bst4CI ACNGT 3 cut(s) 295, 1249, 1680
Bst6I CTCTTC 1 cut(s) 880
BstBI TTCGAA 2 cut(s) 605, 1037
BstC8I GCNNGC 6 cut(s) 193, 197, 494, 574, 962, 1969
BstEII GGTNACC 1 cut(s) 1178
BstF5I GGATG 4 cut(s) 325, 476, 654, 1549
BstFNI CGCG 2 cut(s) 217, 1893
BstKTI GATC 8 cut(s) 57, 161, 181, 253, 746, 895, 913, 1159
BstMAI GTCTC 3 cut(s) 234, 240, 1276
BstMBI GATC 8 cut(s) 54, 158, 178, 250, 743, 892, 910, 1156
BstMWI GCNNNNNNNGC 2 cut(s) 569, 1452
BstNI CCWGG 1 cut(s) 1352
BstNSI RCATGY 1 cut(s) 508
BstPI GGTNACC 1 cut(s) 1178
BstSCI CCNGG 2 cut(s) 1350, 2122
BstSFI CTRYAG 4 cut(s) 291, 305, 708, 1670
BstUI CGCG 2 cut(s) 217, 1893
BstV1I GCAGC 9 cut(s) 124, 185, 476, 547, 1455, 1458, 1976, 2074, 2077
BstV2I GAAGAC 2 cut(s) 509, 1599
BstX2I RGATCY 1 cut(s) 54
BstYI RGATCY 1 cut(s) 54
BsuRI GGCC 3 cut(s) 385, 760, 1355
BtsCI GGATG 4 cut(s) 325, 476, 654, 1549
BtsI GCAGTG 2 cut(s) 302, 2061
BtsIMutI CAGTG 6 cut(s) 188, 228, 302, 1037, 1299, 2061
BtuMI TCGCGA 1 cut(s) 1893
BveI ACCTGC 1 cut(s) 895
Cac8I GCNNGC 6 cut(s) 193, 197, 494, 574, 962, 1969
CaiI CAGNNNCTG 2 cut(s) 176, 299
Cfr13I GGNCC 5 cut(s) 383, 758, 1073, 1362, 1680
CseI GACGC 1 cut(s) 876
CspCI CAANNNNNGTGG 2 cut(s) 997, 1032
CviAII CATG 4 cut(s) 505, 1385, 1564, 1948
DpnI GATC 8 cut(s) 56, 160, 180, 252, 745, 894, 912, 1158
DpnII GATC 8 cut(s) 54, 158, 178, 250, 743, 892, 910, 1156
Eam1104I CTCTTC 1 cut(s) 880
EarI CTCTTC 1 cut(s) 880
EciI GGCGGA 1 cut(s) 1337
Eco130I CCWWGG 1 cut(s) 1810
Eco24I GRGCYC 1 cut(s) 410
Eco31I GGTCTC 1 cut(s) 1276
Eco32I GATATC 2 cut(s) 325, 922
Eco47I GGWCC 3 cut(s) 1073, 1362, 1680
Eco57I CTGAAG 2 cut(s) 1227, 1773
Eco91I GGTNACC 1 cut(s) 1178
EcoO109I RGGNCCY 1 cut(s) 383
EcoO65I GGTNACC 1 cut(s) 1178
EcoRII CCWGG 1 cut(s) 1350
EcoRV GATATC 2 cut(s) 325, 922
EcoT14I CCWWGG 1 cut(s) 1810
EcoT22I ATGCAT 1 cut(s) 838
EcoT38I GRGCYC 1 cut(s) 410
ErhI CCWWGG 1 cut(s) 1810
Esp3I CGTCTC 2 cut(s) 234, 240
FaeI CATG 4 cut(s) 508, 1388, 1567, 1951
FalI AAGNNNNNCTT 6 cut(s) 1310, 1342, 1794, 1826, 1892, 1924
FaqI GGGAC 1 cut(s) 1333
FatI CATG 4 cut(s) 504, 1384, 1563, 1947
FbaI TGATCA 1 cut(s) 178
FblI GTMKAC 1 cut(s) 2109
FokI GGATG 4 cut(s) 332, 483, 641, 1556
FriOI GRGCYC 1 cut(s) 410
FspBI CTAG 5 cut(s) 192, 254, 413, 573, 2153
GsuI CTGGAG 3 cut(s) 1117, 1482, 1949
HaeIII GGCC 3 cut(s) 385, 760, 1355
HapII CCGG 4 cut(s) 580, 640, 1365, 2124
HgaI GACGC 1 cut(s) 876
Hin1II CATG 4 cut(s) 508, 1388, 1567, 1951
HincII GTYRAC 1 cut(s) 2110
HindII GTYRAC 1 cut(s) 2110
HindIII AAGCTT 5 cut(s) 16, 86, 1141, 1791, 2029
HinfI GANTC 9 cut(s) 449, 514, 667, 1027, 1379, 1534, 1714, 1748, 1944
HpaII CCGG 4 cut(s) 580, 640, 1365, 2124
HphI GGTGA 1 cut(s) 455
Hpy166II GTNNAC 7 cut(s) 11, 105, 221, 367, 854, 1822, 2110
Hpy188III TCNNGA 7 cut(s) 798, 1134, 1376, 1420, 1461, 1706, 1892
Hpy8I GTNNAC 7 cut(s) 11, 105, 221, 367, 854, 1822, 2110
Hpy99I CGWCG 3 cut(s) 39, 700, 2114
HpyAV CCTTC 9 cut(s) 39, 91, 210, 601, 1017, 1202, 1362, 1873, 2144
HpyCH4III ACNGT 3 cut(s) 295, 1249, 1680
HpyCH4IV ACGT 2 cut(s) 369, 1003
HpyF10VI GCNNNNNNNGC 2 cut(s) 569, 1452
HpySE526I ACGT 2 cut(s) 369, 1003
Hsp92II CATG 4 cut(s) 508, 1388, 1567, 1951
Ksp22I TGATCA 1 cut(s) 178
Kzo9I GATC 8 cut(s) 54, 158, 178, 250, 743, 892, 910, 1156
LmnI GCTCC 4 cut(s) 413, 1136, 1729, 2125
Lsp1109I GCAGC 9 cut(s) 124, 185, 476, 547, 1455, 1458, 1976, 2074, 2077
LweI GCATC 3 cut(s) 404, 823, 1534
MaeI CTAG 5 cut(s) 192, 254, 413, 573, 2153
MaeII ACGT 2 cut(s) 369, 1003
MaeIII GTNAC 4 cut(s) 700, 1178, 1420, 1760
MalI GATC 8 cut(s) 56, 160, 180, 252, 745, 894, 912, 1158
MboI GATC 8 cut(s) 54, 158, 178, 250, 743, 892, 910, 1156
MflI RGATCY 1 cut(s) 54
MhlI GDGCHC 1 cut(s) 410
MluI ACGCGT 1 cut(s) 215
MlyI GAGTC 2 cut(s) 523, 1953
MmeI TCCRAC 3 cut(s) 1051, 1066, 1707
Mph1103I ATGCAT 1 cut(s) 838
MroXI GAANNNNTTC 3 cut(s) 1907, 2016, 2101
MseI TTAA 6 cut(s) 597, 1145, 1274, 1404, 1694, 2158
MslI CAYNNNNRTG 1 cut(s) 1568
MspA1I CMGCKG 4 cut(s) 176, 441, 1927, 1967
MspI CCGG 4 cut(s) 580, 640, 1365, 2124
MspR9I CCNGG 2 cut(s) 1352, 2124
Mva1269I GAATGC 2 cut(s) 292, 574
MvaI CCWGG 1 cut(s) 1352
MvnI CGCG 2 cut(s) 217, 1893
MwoI GCNNNNNNNGC 2 cut(s) 569, 1452
NciI CCSGG 1 cut(s) 2124
NdeII GATC 8 cut(s) 54, 158, 178, 250, 743, 892, 910, 1156
NheI GCTAGC 2 cut(s) 191, 572
NlaIII CATG 4 cut(s) 508, 1388, 1567, 1951
NlaIV GGNNCC 6 cut(s) 409, 814, 1132, 1594, 1731, 2098
NmuCI GTSAC 2 cut(s) 1420, 1760
NruI TCGCGA 1 cut(s) 1893
NsiI ATGCAT 1 cut(s) 838
NspI RCATGY 1 cut(s) 508
NspV TTCGAA 2 cut(s) 605, 1037
PctI GAATGC 2 cut(s) 292, 574
PdmI GAANNNNTTC 3 cut(s) 1907, 2016, 2101
PfeI GAWTC 7 cut(s) 449, 667, 1027, 1379, 1534, 1714, 1748
PflMI CCANNNNNTGG 2 cut(s) 499, 1589
PleI GAGTC 2 cut(s) 522, 1952
PpsI GAGTC 2 cut(s) 522, 1952
Psp6I CCWGG 1 cut(s) 1350
PspEI GGTNACC 1 cut(s) 1178
PspGI CCWGG 1 cut(s) 1350
PspN4I GGNNCC 6 cut(s) 409, 814, 1132, 1594, 1731, 2098
PspPI GGNCC 5 cut(s) 383, 758, 1073, 1362, 1680
PstI CTGCAG 1 cut(s) 309
PstNI CAGNNNCTG 2 cut(s) 176, 299
PsuI RGATCY 1 cut(s) 54
PvuII CAGCTG 3 cut(s) 176, 1927, 1967
RruI TCGCGA 1 cut(s) 1893
RseI CAYNNNNRTG 1 cut(s) 1568
SalI GTCGAC 1 cut(s) 2108
SaqAI TTAA 6 cut(s) 597, 1145, 1274, 1404, 1694, 2158
Sau3AI GATC 8 cut(s) 54, 158, 178, 250, 743, 892, 910, 1156
Sau96I GGNCC 5 cut(s) 383, 758, 1073, 1362, 1680
SchI GAGTC 2 cut(s) 523, 1953
ScrFI CCNGG 2 cut(s) 1352, 2124
SduI GDGCHC 1 cut(s) 410
SfaNI GCATC 3 cut(s) 404, 823, 1534
SfcI CTRYAG 4 cut(s) 291, 305, 708, 1670
SfuI TTCGAA 2 cut(s) 605, 1037
SinI GGWCC 3 cut(s) 1073, 1362, 1680
SmiMI CAYNNNNRTG 1 cut(s) 1568
SmlI CTYRAG 1 cut(s) 387
SmoI CTYRAG 1 cut(s) 387
SsiI CCGC 6 cut(s) 441, 468, 981, 1322, 1506, 1727
SspMI CTAG 5 cut(s) 192, 254, 413, 573, 2153
StyD4I CCNGG 2 cut(s) 1350, 2122
StyI CCWWGG 1 cut(s) 1810
TaaI ACNGT 3 cut(s) 295, 1249, 1680
TaiI ACGT 2 cut(s) 372, 1006
TauI GCSGC 1 cut(s) 1508
TfiI GAWTC 7 cut(s) 449, 667, 1027, 1379, 1534, 1714, 1748
Tru1I TTAA 6 cut(s) 597, 1145, 1274, 1404, 1694, 2158
Tru9I TTAA 6 cut(s) 597, 1145, 1274, 1404, 1694, 2158
TscAI CASTG 6 cut(s) 188, 235, 309, 1037, 1299, 2068
TseFI GTSAC 2 cut(s) 1420, 1760
TseI GCWGC 9 cut(s) 137, 173, 489, 560, 1443, 1446, 1964, 2087, 2090
Tsp45I GTSAC 2 cut(s) 1420, 1760
TspGWI ACGGA 1 cut(s) 258
TspRI CASTG 6 cut(s) 188, 235, 309, 1037, 1299, 2068
Van91I CCANNNNNTGG 2 cut(s) 499, 1589
VpaK11BI GGWCC 3 cut(s) 1073, 1362, 1680
XapI RAATTY 3 cut(s) 827, 1481, 1527
XceI RCATGY 1 cut(s) 508
XmiI GTMKAC 1 cut(s) 2109
XmnI GAANNNNTTC 3 cut(s) 1907, 2016, 2101
XspI CTAG 5 cut(s) 192, 254, 413, 573, 2153
Zsp2I ATGCAT 1 cut(s) 838
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.