pycom11g10240

RING/Ubox like zinc-binding domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0001311
Physical Location & Seq
Reverse (-)
8638030 .. 8643419
5390 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2286 bp
ATGAAGTCTCAGAAGGCAAAAGTCAAATCTACTGAAGGGCGGAAGCAGCTCACTACTGTGCGAGTGATTCAACGGAACCTCGTTTACATAGTTGGGTTGCCTCTTAATCTGGCAGATGAAGATCTTCTGCAGCGCAGAGAATATTTTGGTCAGTATGGGAAGGTTCAAAAAGTTTCAATGTCTCGAACAGCAGCTGGCGTCATTCAGCAATTTCCAAACAATACATGTAGTTCAGTATATATTACATACTCAAAAGAGGAGGAAGCGGTTCGTTGTATTCAAAATGTACATGGGTTCCTCTTGGATGGTAGATCTTTGAGGGCTTGCTTTGGGACCACAAAATATTGTCATGCATGGCTGAGGAATGTGCCTTGCACCAATCCTGATTGTTTGTATCTGCATGAGGTTGGGTCTCAGGAGGATAGTTTCACTAAAGATGAAATAATTTCTGCATACACTAGGGGAACACATGGTTCAAACTGCCAACCACCAGCTACACATATAATAAGTTCAAATGGACATTCTAAACAGAAACCTGATACAGTCAGAAGCACATTGCCATATTCTGCAGCAACTGGTGCTTCTGTTCAGTTATCTACAGTGCATAGTGAAGGAGGAAAGAGGTCAGCATTAAATGAAGAAAGTCAGACTTTGCATGCTAAATGTAAACCAGAATCATTGAAGATTGTGAAACAGCATAGTGGTGTGGATTGTCAAAATGATCTGTCTGACGTACCTGCTGCACCTGATGAAGGTTCTACTTCTGCGAATGTTAGCAACCAATTATTTGCGACATCTGTATCCAAGGAAGATGATAGAGGCAGAAGCATGCAACCAAACATTAGCAATCCTACCAACCATCTATCATGCAGTTCCTCTCATGAAAAAGAAAACATTGTTTCCACTGAAGAAGTGGTCCAAAACTTATGCTCTGATATCCCTTTAATGAGCATTGATAGAAATGCCAAGTTTGACAATTCCAGTGTAGCCAGATCTAATAGTTCACCTTCAGATAACTCCTTTATTAAATCGCCTCGGGACCAACAATATTGTGCTGAGCAGTCTAGAGATCCTCCATCAACTGGTGAGAAAGCTGTCACATCGGTTAATGGGGTGTGTATTACAAGGGAACAATCCAACTGGACGTTAGAGTCACAACCCCAACTAGTGCCAAGTACATCTTCTGAAGTCGAGGAGGATGTGCTGTCTTTTGACAATCAAAGACTCAAGGATCCAGAAGTGAGTCGGTCAACATATTTGCCTAGTTTGCCTAATACAGTACATGCTCCAAATCACTCTAGGCCCCCTTTGTTGCATAATGAGGCTTATGGTGCAGTTTATTCCAATGCTGATTGTCTATTTGTAGATAACAAGGTTAGGGATAGTTCACTTTTATCTAATGGTTACCCTGAAAACATGGTAACGAGATCTTCTGGTTCAGGGAGGCCATTGGAGTATCCCTATCCTCTTCCAAATGAAGTCCCAGGGAAGCACACTGGAAGATTCCTGGATGATGCAGCAAATCCTGATTTCAGTACTGCTGCTGACAAGGGAGAGAGTAGCATAATCTCAAATATATTATCAATGGACTTTGACACATGGGATGACTCACTAACATCACCACAGCATTTCTCCAAATTGTTGGGTGAAACTGATAAACAGTCTGGAGCGCTCAAAATGTCAAGTCCTTGGAAAGTACAAAATAATAATCAGTCCAGATTCTCTTTTGCAAGACAGGAGGATGCTAAAAATCAAGCATTTGATTTACAGTCATCTCTGAATGTCGATGGGCAGTTTTCTAATAACCAGTCAGTCCATCAGGGCTTTTCTGAAAATAGAGATCTATATTTGGATAATCTAGGAATTGGAAATGGTTTCCCATCTAGTACTTTTGAAGAATCTGAAAGTCATGCCAGAAATCATTTAGCATTCTCTTCTAACAAGCTTTCTGGTGAGTATTGTCTGGATTTATGGAAAACTCTCTTCTATTTCATATTTATTGAGCTTCACGTTATTTGCTGCCTTCCATTTGGTTTGTTACGTTATTTACTGCCTTTCATTTGGTTTGTCATGGCTCAAATTTCTGCTCCTCCTGGATTCTCTGTGCCAAGCAGGGCGCCACCTCCAGGCTTTACTTCCCATGAGAGAGTGGATCAGGATTTTGACACTCTGTCTGGGAATCATATGTATGGTACTTCATCTTTGTTGAGAAACGCATATCAACCTCAGGCAAATGGAAATATTGGGAGCTCTGCAGATATTGAGTTTATGGATCGGAGGTCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000075 GO:0000077 GO:0000278 GO:0000288 GO:0000289 GO:0000956 GO:0002682 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006401 GO:0006402 GO:0006464 GO:0006508 GO:0006511 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006977 GO:0007049 GO:0007093 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009892 GO:0009987 GO:0010468 GO:0010564 GO:0010605 GO:0010629 GO:0010948 GO:0016070 GO:0016071 GO:0016567 GO:0016740 GO:0019222 GO:0019439 GO:0019538 GO:0019787 GO:0019941 GO:0022402 GO:0023052 GO:0030163 GO:0030330 GO:0031570 GO:0031571 GO:0032446 GO:0033554 GO:0034641 GO:0034655 GO:0035556 GO:0036211 GO:0042770 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044270 GO:0044424 GO:0044444 GO:0044464 GO:0044773 GO:0044774 GO:0044783 GO:0044819 GO:0045595 GO:0045637 GO:0045652 GO:0045786 GO:0045787 GO:0045930 GO:0046483 GO:0046700 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051603 GO:0051716 GO:0051726 GO:0051865 GO:0060255 GO:0065007 GO:0070647 GO:0071156 GO:0071158 GO:0071704 GO:0072331 GO:0072395 GO:0072401 GO:0072413 GO:0072422 GO:0072431 GO:0090068 GO:0090304 GO:0140096 GO:1901360 GO:1901361 GO:1901564 GO:1901565 GO:1901575 GO:1901987 GO:1901988 GO:1901990 GO:1901991 GO:1902400 GO:1902402 GO:1902403 GO:1902806 GO:1902807 GO:1903047 GO:1903706 GO:2000026 GO:2000045 GO:2000134
KEGG Pathways
Metabolic & Signaling
ko03018 map03018
Pfam Domains
Protein Families
RRM_1 zf-RING_4

Protein Analysis

762

Amino Acids

84.17

Weight (kDa)

5.73

Isoelectric Point (pI)

54.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1150
Acc36I ACCTGC 1 cut(s) 745
AccB1I GGYRCC 1 cut(s) 2116
AccB7I CCANNNNNTGG 1 cut(s) 1082
AciI CCGC 2 cut(s) 40, 266
AclWI GGATC 5 cut(s) 1064, 1226, 1239, 2160, 2280
AcsI RAATTY 1 cut(s) 2079
AcuI CTGAAG 4 cut(s) 54, 927, 993, 1206
AcyI GRCGYC 2 cut(s) 198, 2117
AfaI GTAC 8 cut(s) 288, 735, 1177, 1281, 1537, 1698, 1888, 2194
AfeI AGCGCT 1 cut(s) 1671
AfiI CCNNNNNNNGG 3 cut(s) 752, 1082, 2126
AflIII ACRYGT 1 cut(s) 224
AgsI TTSAA 8 cut(s) 71, 167, 177, 281, 477, 513, 682, 1895
AhdI GACNNNNNGTC 1 cut(s) 2170
AhlI ACTAGT 1 cut(s) 1165
AjnI CCWGG 4 cut(s) 1483, 1506, 2092, 2125
AjuI GAANNNNNNNTTGG 2 cut(s) 1165, 1197
AleI CACNNNNGTG 1 cut(s) 56
AluBI AGCT 7 cut(s) 49, 194, 494, 1094, 1945, 2005, 2250
AluI AGCT 7 cut(s) 49, 194, 494, 1094, 1945, 2005, 2250
Alw21I GWGCWC 1 cut(s) 2252
Alw26I GTCTC 3 cut(s) 12, 186, 417
AlwI GGATC 5 cut(s) 1064, 1226, 1239, 2160, 2280
AlwNI CAGNNNCTG 2 cut(s) 194, 575
Ama87I CYCGRG 1 cut(s) 1035
Aor51HI AGCGCT 1 cut(s) 1671
AoxI GGCC 2 cut(s) 1301, 1445
ApeKI GCWGC 8 cut(s) 46, 130, 191, 569, 740, 1517, 1541, 2019
ApoI RAATTY 1 cut(s) 2079
Asp700I GAANNNNTTC 2 cut(s) 123, 267
AspLEI GCGC 3 cut(s) 135, 1672, 2119
AspS9I GGNCC 4 cut(s) 333, 916, 1039, 1302
AsuHPI GGTGA 5 cut(s) 996, 1097, 1611, 1658, 1964
AvaI CYCGRG 1 cut(s) 1035
AvaII GGWCC 3 cut(s) 333, 916, 1039
AxyI CCTNAGG 1 cut(s) 2226
BaeI ACNNNNGTAYC 2 cut(s) 783, 816
BamHI GGATCC 1 cut(s) 1231
BanI GGYRCC 1 cut(s) 2116
BanII GRGCYC 1 cut(s) 2252
Bbv12I GWGCWC 1 cut(s) 2252
BbvCI CCTCAGC 1 cut(s) 359
BbvI GCAGC 8 cut(s) 58, 142, 203, 581, 727, 1528, 1529, 2006
BccI CCATC 6 cut(s) 299, 867, 1084, 1781, 1824, 1888
BciT130I CCWGG 4 cut(s) 1485, 1508, 2094, 2127
BciVI GTATCC 2 cut(s) 811, 1467
BcoDI GTCTC 3 cut(s) 12, 186, 417
BcuI ACTAGT 1 cut(s) 1165
BfaI CTAG 7 cut(s) 459, 1065, 1166, 1263, 1299, 1859, 1884
BfmI CTRYAG 4 cut(s) 128, 567, 597, 2253
BfoI RGCGCY 2 cut(s) 1673, 2120
BfuAI ACCTGC 1 cut(s) 745
BfuI GTATCC 2 cut(s) 811, 1467
BglII AGATCT 5 cut(s) 121, 311, 992, 1427, 1840
BisI GCNGC 8 cut(s) 47, 131, 192, 570, 741, 1518, 1542, 2020
BlpI GCTNAGC 1 cut(s) 1056
BlsI GCNGC 8 cut(s) 48, 132, 193, 571, 742, 1519, 1543, 2021
BmcAI AGTACT 2 cut(s) 1537, 1888
Bme1390I CCNGG 4 cut(s) 1485, 1508, 2094, 2127
Bme18I GGWCC 3 cut(s) 333, 916, 1039
BmeRI GACNNNNNGTC 1 cut(s) 2170
BmeT110I CYCGRG 1 cut(s) 1035
BmgT120I GGNCC 4 cut(s) 333, 916, 1039, 1302
BmiI GGNNCC 7 cut(s) 77, 296, 334, 1040, 1233, 1304, 2118
BmrFI CCNGG 4 cut(s) 1485, 1508, 2094, 2127
BmsI GCATC 2 cut(s) 1504, 1732
BpmI CTGGAG 2 cut(s) 1686, 2109
Bpu10I CCTNAGC 1 cut(s) 359
Bpu1102I GCTNAGC 1 cut(s) 1056
BpuEI CTTGAG 1 cut(s) 1211
BsaBI GATNNNNATC 1 cut(s) 120
BsaHI GRCGYC 2 cut(s) 198, 2117
BsaI GGTCTC 1 cut(s) 417
BsaJI CCNNGG 5 cut(s) 804, 1034, 1483, 1484, 1688
Bsc4I CCNNNNNNNGG 3 cut(s) 752, 1082, 2126
Bse1I ACTGG 6 cut(s) 580, 981, 1087, 1145, 1501, 1807
Bse21I CCTNAGG 1 cut(s) 2226
Bse3DI GCAATG 1 cut(s) 554
Bse8I GATNNNNATC 1 cut(s) 120
BseBI CCWGG 4 cut(s) 1485, 1508, 2094, 2127
BseDI CCNNGG 5 cut(s) 804, 1034, 1483, 1484, 1688
BseGI GGATG 5 cut(s) 310, 1204, 1516, 1609, 1747
BseJI GATNNNNATC 1 cut(s) 120
BseLI CCNNNNNNNGG 3 cut(s) 752, 1082, 2126
BseMI GCAATG 1 cut(s) 554
BseMII CTCAG 5 cut(s) 23, 350, 428, 1047, 2240
BseNI ACTGG 6 cut(s) 580, 981, 1087, 1145, 1501, 1807
BseRI GAGGAG 3 cut(s) 272, 1208, 2079
BseXI GCAGC 8 cut(s) 58, 142, 203, 581, 727, 1528, 1529, 2006
BsgI GTGCAG 2 cut(s) 726, 1353
BshFI GGCC 2 cut(s) 1303, 1447
BshNI GGYRCC 1 cut(s) 2116
BsiHKAI GWGCWC 1 cut(s) 2252
BsiHKCI CYCGRG 1 cut(s) 1035
BslFI GGGAC 3 cut(s) 346, 1052, 1466
BslI CCNNNNNNNGG 3 cut(s) 752, 1082, 2126
BsmAI GTCTC 3 cut(s) 12, 186, 417
BsmFI GGGAC 3 cut(s) 346, 1052, 1466
BsmI GAATGC 1 cut(s) 1928
BsnI GGCC 2 cut(s) 1303, 1447
Bso31I GGTCTC 1 cut(s) 417
BsoBI CYCGRG 1 cut(s) 1035
Bsp1286I GDGCHC 1 cut(s) 2252
Bsp1407I TGTACA 1 cut(s) 286
Bsp1720I GCTNAGC 1 cut(s) 1056
BspACI CCGC 2 cut(s) 40, 266
BspANI GGCC 2 cut(s) 1303, 1447
BspCNI CTCAG 5 cut(s) 22, 351, 427, 1048, 2239
BspHI TCATGA 1 cut(s) 880
BspLI GGNNCC 7 cut(s) 77, 296, 334, 1040, 1233, 1304, 2118
BspMAI CTGCAG 3 cut(s) 132, 571, 2257
BspMI ACCTGC 1 cut(s) 745
BspPI GGATC 5 cut(s) 1064, 1226, 1239, 2160, 2280
BspT107I GGYRCC 1 cut(s) 2116
BspTNI GGTCTC 1 cut(s) 417
BsrDI GCAATG 1 cut(s) 554
BsrGI TGTACA 1 cut(s) 286
BsrI ACTGG 6 cut(s) 580, 981, 1087, 1145, 1501, 1807
BssECI CCNNGG 5 cut(s) 804, 1034, 1483, 1484, 1688
BssNI GRCGYC 2 cut(s) 198, 2117
BssT1I CCWWGG 2 cut(s) 804, 1688
Bst2UI CCWGG 4 cut(s) 1485, 1508, 2094, 2127
Bst4CI ACNGT 6 cut(s) 58, 544, 601, 1279, 1662, 1770
Bst6I CTCTTC 3 cut(s) 1473, 1939, 1988
BstACI GRCGYC 2 cut(s) 198, 2117
BstAPI GCANNNNNTGC 1 cut(s) 578
BstAUI TGTACA 1 cut(s) 286
BstC8I GCNNGC 4 cut(s) 196, 325, 657, 830
BstDEI CTNAG 5 cut(s) 9, 359, 414, 1056, 2226
BstEII GGTNACC 1 cut(s) 1403
BstENI CCTNNNNNAGG 1 cut(s) 750
BstF5I GGATG 5 cut(s) 310, 1204, 1516, 1609, 1747
BstH2I RGCGCY 2 cut(s) 1673, 2120
BstHHI GCGC 3 cut(s) 135, 1672, 2119
BstMAI GTCTC 3 cut(s) 12, 186, 417
BstMWI GCNNNNNNNGC 4 cut(s) 46, 578, 1267, 1331
BstNI CCWGG 4 cut(s) 1485, 1508, 2094, 2127
BstNSI RCATGY 4 cut(s) 228, 659, 832, 1286
BstPI GGTNACC 1 cut(s) 1403
BstSCI CCNGG 4 cut(s) 1483, 1506, 2092, 2125
BstSFI CTRYAG 4 cut(s) 128, 567, 597, 2253
BstV1I GCAGC 8 cut(s) 58, 142, 203, 581, 727, 1528, 1529, 2006
BstX2I RGATCY 7 cut(s) 121, 311, 992, 1069, 1231, 1427, 1840
BstXI CCANNNNNNTGG 1 cut(s) 1642
BstYI RGATCY 7 cut(s) 121, 311, 992, 1069, 1231, 1427, 1840
Bsu36I CCTNAGG 1 cut(s) 2226
BsuI GTATCC 2 cut(s) 811, 1467
BsuRI GGCC 2 cut(s) 1303, 1447
BtsCI GGATG 5 cut(s) 310, 1204, 1516, 1609, 1747
BtsIMutI CAGTG 4 cut(s) 606, 903, 988, 1494
BveI ACCTGC 1 cut(s) 745
Cac8I GCNNGC 4 cut(s) 196, 325, 657, 830
CaiI CAGNNNCTG 2 cut(s) 194, 575
CciI TCATGA 1 cut(s) 880
CfoI GCGC 3 cut(s) 135, 1672, 2119
Cfr13I GGNCC 4 cut(s) 333, 916, 1039, 1302
CseI GACGC 1 cut(s) 187
Csp6I GTAC 8 cut(s) 287, 734, 1176, 1280, 1536, 1697, 1887, 2193
CviQI GTAC 8 cut(s) 287, 734, 1176, 1280, 1536, 1697, 1887, 2193
DdeI CTNAG 5 cut(s) 9, 359, 414, 1056, 2226
DinI GGCGCC 1 cut(s) 2118
DrdI GACNNNNNNGTC 1 cut(s) 1150
DriI GACNNNNNGTC 1 cut(s) 2170
DseDI GACNNNNNNGTC 1 cut(s) 1150
Eam1104I CTCTTC 3 cut(s) 1473, 1939, 1988
Eam1105I GACNNNNNGTC 1 cut(s) 2170
EarI CTCTTC 3 cut(s) 1473, 1939, 1988
EciI GGCGGA 1 cut(s) 55
Ecl136II GAGCTC 1 cut(s) 2250
Eco130I CCWWGG 2 cut(s) 804, 1688
Eco24I GRGCYC 1 cut(s) 2252
Eco31I GGTCTC 1 cut(s) 417
Eco32I GATATC 1 cut(s) 937
Eco47I GGWCC 3 cut(s) 333, 916, 1039
Eco47III AGCGCT 1 cut(s) 1671
Eco53kI GAGCTC 1 cut(s) 2250
Eco57I CTGAAG 4 cut(s) 54, 927, 993, 1206
Eco81I CCTNAGG 1 cut(s) 2226
Eco88I CYCGRG 1 cut(s) 1035
Eco91I GGTNACC 1 cut(s) 1403
EcoICRI GAGCTC 1 cut(s) 2250
EcoNI CCTNNNNNAGG 1 cut(s) 750
EcoO109I RGGNCCY 1 cut(s) 1302
EcoO65I GGTNACC 1 cut(s) 1403
EcoRII CCWGG 4 cut(s) 1483, 1506, 2092, 2125
EcoRV GATATC 1 cut(s) 937
EcoT14I CCWWGG 2 cut(s) 804, 1688
EcoT22I ATGCAT 1 cut(s) 355
EcoT38I GRGCYC 1 cut(s) 2252
EgeI GGCGCC 1 cut(s) 2118
EheI GGCGCC 1 cut(s) 2118
ErhI CCWWGG 2 cut(s) 804, 1688
FalI AAGNNNNNCTT 4 cut(s) 634, 666, 1165, 1197
FaqI GGGAC 3 cut(s) 346, 1052, 1466
FauNDI CATATG 1 cut(s) 2184
Fnu4HI GCNGC 8 cut(s) 47, 131, 192, 570, 741, 1518, 1542, 2020
FokI GGATG 5 cut(s) 317, 1211, 1523, 1616, 1754
FriOI GRGCYC 1 cut(s) 2252
Fsp4HI GCNGC 8 cut(s) 47, 131, 192, 570, 741, 1518, 1542, 2020
FspBI CTAG 7 cut(s) 459, 1065, 1166, 1263, 1299, 1859, 1884
GlaI GCGC 3 cut(s) 134, 1671, 2118
GluI GCNGC 8 cut(s) 47, 131, 192, 570, 741, 1518, 1542, 2020
GsuI CTGGAG 2 cut(s) 1686, 2109
HaeII RGCGCY 2 cut(s) 1673, 2120
HaeIII GGCC 2 cut(s) 1303, 1447
HgaI GACGC 1 cut(s) 187
HhaI GCGC 3 cut(s) 135, 1672, 2119
Hin1I GRCGYC 2 cut(s) 198, 2117
Hin6I GCGC 3 cut(s) 133, 1670, 2117
HinP1I GCGC 3 cut(s) 133, 1670, 2117
HincII GTYRAC 1 cut(s) 1251
HindII GTYRAC 1 cut(s) 1251
HindIII AAGCTT 1 cut(s) 1943
HphI GGTGA 5 cut(s) 996, 1097, 1611, 1658, 1964
Hpy166II GTNNAC 5 cut(s) 85, 668, 1004, 1251, 1388
Hpy8I GTNNAC 5 cut(s) 85, 668, 1004, 1251, 1388
HpyAV CCTTC 7 cut(s) 7, 29, 154, 605, 746, 1017, 2033
HpyCH4III ACNGT 6 cut(s) 58, 544, 601, 1279, 1662, 1770
HpyCH4IV ACGT 4 cut(s) 732, 1145, 2010, 2041
HpyF10VI GCNNNNNNNGC 4 cut(s) 46, 578, 1267, 1331
HpyF3I CTNAG 5 cut(s) 9, 359, 414, 1056, 2226
HpySE526I ACGT 4 cut(s) 732, 1145, 2010, 2041
Hsp92I GRCGYC 2 cut(s) 198, 2117
HspAI GCGC 3 cut(s) 133, 1670, 2117
KasI GGCGCC 1 cut(s) 2116
LmnI GCTCC 4 cut(s) 1291, 1667, 2092, 2247
Lsp1109I GCAGC 8 cut(s) 58, 142, 203, 581, 727, 1528, 1529, 2006
LweI GCATC 2 cut(s) 1504, 1732
MaeI CTAG 7 cut(s) 459, 1065, 1166, 1263, 1299, 1859, 1884
MaeII ACGT 4 cut(s) 732, 1145, 2010, 2041
MaeIII GTNAC 5 cut(s) 1096, 1152, 1403, 1420, 2037
MflI RGATCY 7 cut(s) 121, 311, 992, 1069, 1231, 1427, 1840
MhlI GDGCHC 1 cut(s) 2252
MluCI AATT 7 cut(s) 209, 444, 782, 976, 1637, 1863, 2079
Mly113I GGCGCC 1 cut(s) 2117
MlyI GAGTC 4 cut(s) 1160, 1218, 1252, 1601
MmeI TCCRAC 1 cut(s) 1161
Mph1103I ATGCAT 1 cut(s) 355
MroXI GAANNNNTTC 2 cut(s) 123, 267
MseI TTAA 5 cut(s) 105, 632, 944, 1026, 1107
MslI CAYNNNNRTG 3 cut(s) 56, 702, 2187
MspA1I CMGCKG 1 cut(s) 194
MspR9I CCNGG 4 cut(s) 1485, 1508, 2094, 2127
Mva1269I GAATGC 1 cut(s) 1928
MvaI CCWGG 4 cut(s) 1485, 1508, 2094, 2127
MwoI GCNNNNNNNGC 4 cut(s) 46, 578, 1267, 1331
NarI GGCGCC 1 cut(s) 2117
NdeI CATATG 1 cut(s) 2184
NlaIV GGNNCC 7 cut(s) 77, 296, 334, 1040, 1233, 1304, 2118
NmuCI GTSAC 2 cut(s) 1096, 1152
NsiI ATGCAT 1 cut(s) 355
NspI RCATGY 4 cut(s) 228, 659, 832, 1286
OliI CACNNNNGTG 1 cut(s) 56
PaeI GCATGC 2 cut(s) 659, 832
PagI TCATGA 1 cut(s) 880
PasI CCCWGGG 1 cut(s) 1484
PciI ACATGT 1 cut(s) 224
PctI GAATGC 1 cut(s) 1928
PdmI GAANNNNTTC 2 cut(s) 123, 267
PfeI GAWTC 7 cut(s) 67, 674, 1503, 1719, 1898, 2097, 2179
PflMI CCANNNNNTGG 1 cut(s) 1082
PfoI TCCNGGA 2 cut(s) 1506, 2092
PkrI GCNGC 8 cut(s) 48, 132, 193, 571, 742, 1519, 1543, 2021
PleI GAGTC 4 cut(s) 1159, 1218, 1251, 1601
PluTI GGCGCC 1 cut(s) 2120
PpsI GAGTC 4 cut(s) 1159, 1218, 1251, 1601
PscI ACATGT 1 cut(s) 224
Psp124BI GAGCTC 1 cut(s) 2252
Psp6I CCWGG 4 cut(s) 1483, 1506, 2092, 2125
PspEI GGTNACC 1 cut(s) 1403
PspGI CCWGG 4 cut(s) 1483, 1506, 2092, 2125
PspN4I GGNNCC 7 cut(s) 77, 296, 334, 1040, 1233, 1304, 2118
PspPI GGNCC 4 cut(s) 333, 916, 1039, 1302
PsrI GAACNNNNNNTAC 2 cut(s) 68, 100
PstI CTGCAG 3 cut(s) 132, 571, 2257
PstNI CAGNNNCTG 2 cut(s) 194, 575
PsuI RGATCY 7 cut(s) 121, 311, 992, 1069, 1231, 1427, 1840
PvuII CAGCTG 1 cut(s) 194
RsaI GTAC 8 cut(s) 288, 735, 1177, 1281, 1537, 1698, 1888, 2194
RsaNI GTAC 8 cut(s) 287, 734, 1176, 1280, 1536, 1697, 1887, 2193
RseI CAYNNNNRTG 3 cut(s) 56, 702, 2187
SacI GAGCTC 1 cut(s) 2252
SaqAI TTAA 5 cut(s) 105, 632, 944, 1026, 1107
SatI GCNGC 8 cut(s) 47, 131, 192, 570, 741, 1518, 1542, 2020
Sau96I GGNCC 4 cut(s) 333, 916, 1039, 1302
ScaI AGTACT 2 cut(s) 1537, 1888
SchI GAGTC 4 cut(s) 1160, 1218, 1252, 1601
ScrFI CCNGG 4 cut(s) 1485, 1508, 2094, 2127
SduI GDGCHC 1 cut(s) 2252
SfaNI GCATC 2 cut(s) 1504, 1732
SfcI CTRYAG 4 cut(s) 128, 567, 597, 2253
SfoI GGCGCC 1 cut(s) 2118
SinI GGWCC 3 cut(s) 333, 916, 1039
SmiMI CAYNNNNRTG 3 cut(s) 56, 702, 2187
SmlI CTYRAG 1 cut(s) 1226
SmoI CTYRAG 1 cut(s) 1226
SpeI ACTAGT 1 cut(s) 1165
SphI GCATGC 2 cut(s) 659, 832
Sse9I AATT 7 cut(s) 209, 444, 782, 976, 1637, 1863, 2079
SsiI CCGC 2 cut(s) 40, 266
SspDI GGCGCC 1 cut(s) 2116
SspI AATATT 4 cut(s) 143, 344, 1049, 2242
SspMI CTAG 7 cut(s) 459, 1065, 1166, 1263, 1299, 1859, 1884
SstI GAGCTC 1 cut(s) 2252
StyD4I CCNGG 4 cut(s) 1483, 1506, 2092, 2125
StyI CCWWGG 2 cut(s) 804, 1688
TaaI ACNGT 6 cut(s) 58, 544, 601, 1279, 1662, 1770
TaiI ACGT 4 cut(s) 735, 1148, 2013, 2044
TaqI TCGA 3 cut(s) 184, 1191, 1785
TaqII GACCGA 1 cut(s) 1236
TasI AATT 7 cut(s) 209, 444, 782, 976, 1637, 1863, 2079
TatI WGTACW 6 cut(s) 286, 1175, 1279, 1535, 1696, 1886
TfiI GAWTC 7 cut(s) 67, 674, 1503, 1719, 1898, 2097, 2179
Tru1I TTAA 5 cut(s) 105, 632, 944, 1026, 1107
Tru9I TTAA 5 cut(s) 105, 632, 944, 1026, 1107
TscAI CASTG 4 cut(s) 606, 910, 988, 1501
TseFI GTSAC 2 cut(s) 1096, 1152
TseI GCWGC 8 cut(s) 46, 130, 191, 569, 740, 1517, 1541, 2019
Tsp45I GTSAC 2 cut(s) 1096, 1152
TspGWI ACGGA 1 cut(s) 88
TspRI CASTG 4 cut(s) 606, 910, 988, 1501
Van91I CCANNNNNTGG 1 cut(s) 1082
VpaK11BI GGWCC 3 cut(s) 333, 916, 1039
XagI CCTNNNNNAGG 1 cut(s) 750
XapI RAATTY 1 cut(s) 2079
XbaI TCTAGA 1 cut(s) 1064
XceI RCATGY 4 cut(s) 228, 659, 832, 1286
XcmI CCANNNNNNNNNTGG 1 cut(s) 910
XmnI GAANNNNTTC 2 cut(s) 123, 267
XspI CTAG 7 cut(s) 459, 1065, 1166, 1263, 1299, 1859, 1884
ZrmI AGTACT 2 cut(s) 1537, 1888
Zsp2I ATGCAT 1 cut(s) 355
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.