Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0004056

Physical Location & Seq

Genomic Coordinates Forward (+)

16434587 .. 16441137

Gene Structure 6551 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2088 bp

ATGAGTAAGAGTACGAATATGACATGTTCGTTAAAACCAGGTTGGTGGGGGGGACCCTTGGCTAAAGAGTCACAGTTGACGATGGGGGAGACGGCGAGAGAGGACAGCAGCAAAGGCACGGTGATCTCAGTAGAAGACGCTCTCGAAACAGTTCTGAGAGTGGTCCAGCGGCTGCCGCCTGTCACTGTGCCCCTCCATGATGCGGCTGGGAAGGTGCTGGCGGAGGACATTCGCGCGCGTGAACCTCTGCCGCCGTACCCTGCGTCGGTGAAGGATGGGTATGCGGTGGTAGCTTCGGATGGGCCAGGCGAGTATCCTGTAATCGCTGAGTCAAGAGCTGGCAACGATGGACTTGGCATCACCGTCACTCCTGGAACTGTAGCCTATGTTACCACTGGAGGACCAATACCTGATGGTGCAGATGCAGTGGTACAAGTTGAGGACACTGAAGAAATTGAAGAGCATTCACTTGATTCAAGGCAAGTAAGAATATTGATACAAACAAGCAAAGGAGTAGATATTCGTCCAGTGGGTTGTGACATTGAAGCAGATGCTGTAGTGTTGACATCTGGGCAAAGAATTGGTGCTTCAGAAATTGGTTTGCTTGCTACTGTAGGAGTGACAATGGTGAAGGTATATCCAACTCCAACAATTGGTGTGCTTTCCACAGGAGATGAACTCGTGGAGCCAATGACAGGTTGTTTAAATCGTGGCCAGATTCGGGACTCCAACCGCGCTATGATACTGGCAGCTTCACTACAGCATCATTGCAAAGTTCTTGACCTAGGTATTGCTAGAGATGATGAAGAAGTACTGGAGAATATCATCAATACTGCCATTTCTGCTGGAGTTGATGTTATTCTTACGTCTGGAGGTGTTTCCATGGGAGACAGGGACTATGTCAAACCACTATTTCAAAGGAGAGGGACAGTGCATTTTAGTAAGGTTTGGATGAAACCAGGAAAGCCTTTAAATTTTGCGGGGATCAATTCCAGACCTGCAGAGAATATGCCAATGAAAAGAATTTTTGCATTCGGGTTGCCTGGAAATCCAGTTAGCTGTCTTGTCTGCTTCCATGTATTTGTGGTCCCTACCATCCGCCGTCTTGCTGGATGGAAAAATCCTCATCTTTTGAGAGTGCATGCTCGTCTTCGTCAGCCTTTAAAGACAGATCCTGCACGCCCAGAATTTCATCGTGCTATCGTTGGATGGGAGTTAAATGATGGATTGGGATATCCTGGCTTTGTTGCTGAGAGTACTGGCCACCAGAGGAGCAGTCGGATTTTAAGTATGAAGTCTGCTAATGCTTTGTTGGAGTTGCCAGCAACAGGCAGTGTAATAGCAGCTGGGACTTCTGTGCCAGCCATCATTATTTCTGATATAAGCAATGCTATTTGCGAAAGTTCCTTGTCACCTAATTCAGCATCACCTTTCCAAAGATTTATACTGCAAGAAAGAACTGTAGCTGAGTCTCAGGATGCTGGGGTTAGAGTAGCAATTCTTACAGTGAGTGATACTGTTGCATCAGGGGCTGGGCCTGATAGAAGTGGTCCAAGAGCAGTTTCTGTTGTAAATTCCTGTTCAGAAAGGTTGGGGGGAGCTAGGGTTGTTTCAACAGCTGTGGTCCCGGATGATGTAAGCAAAATAAAGGATGTTCTACATAGATGGAGTGATATTGAGCAAATGGATCTCATCCTCACCCTCGGTGGTACTGGCTTCACCCCACGAGATGTAACCCCAGAAGCAACCAAAGAGTTGATTGAGAAAGAAACACCTGGTCTTCTTCATGTCATGATGCAAGAGAGTATGAAGGTGACACCAACTGCTATGCTCTCGCGCTCTGCAGCAGGAATAAGAGGGTCATCACTGATCATTAACATGCCTGGGAATCCAAACGCGGTTGCTGAGTGTATGGAGGCTTTGTTGCCTGCCCTCAAGCATGGACTAAAGCAGATAAGGGGAGACAAGAGAGAAAAACATCCCAAACACGTCCCTCACGCACAAGGGGCGACTACGGATGTGTGGGAACAAAGTTATAAGCTGGCCTCAGCTAGTGGCACCGAGCCAGGTTGTTCTTGTTGCCGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006163 GO:0006464 GO:0006725 GO:0006732 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008940 GO:0009058 GO:0009116 GO:0009117 GO:0009119 GO:0009141 GO:0009144 GO:0009150 GO:0009199 GO:0009205 GO:0009259 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0016491 GO:0016661 GO:0016740 GO:0016772 GO:0016779 GO:0018130 GO:0018315 GO:0019538 GO:0019637 GO:0019693 GO:0023052 GO:0030151 GO:0032324 GO:0032870 GO:0034641 GO:0036211 GO:0042040 GO:0042221 GO:0042278 GO:0043167 GO:0043169 GO:0043170 GO:0043412 GO:0043545 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046039 GO:0046128 GO:0046483 GO:0046872 GO:0046914 GO:0050789 GO:0050794 GO:0050896 GO:0051186 GO:0051188 GO:0051189 GO:0051716 GO:0055086 GO:0055114 GO:0061598 GO:0061599 GO:0065007 GO:0070566 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071704 GO:0072521 GO:0090407 GO:1901068 GO:1901135 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657

KEGG Pathways

Metabolic & Signaling

ko00790 ko01100 ko04727 map00790 map01100 map04727

Pfam Domains

Protein Families

MoCF_biosynth MoeA_C MoeA_N

Protein Analysis

696

Amino Acids

74.05

Weight (kDa)

6.18

Isoelectric Point (pI)

41.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MoeA_N	PF03453	42 - 206	6e-41	MoeA N-terminal region (domain I and II)
MoCF_biosynth	PF00994	219 - 367	4.2e-28	Probable molybdopterin binding domain
MoeA_C	PF03454	382 - 456	6.6e-12	MoeA C-terminal region (domain IV)
MoCF_biosynth	PF00994	499 - 647	5.5e-31	Probable molybdopterin binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004056)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G20990 AT5G20990 AT5G20990
fragaria_vesca	FvH4_3g26260 FvH4_3g26260 FvH4_3g26260 FvH4_3g26260 FvH4_3g26260
malus_domestica	MD11G1181200.v1.1
prunus_persica	Prupe.6G153900_v2.0.a1 Prupe.6G153900_v2.0.a1
pyrus_communis	pycom03g11700 pycom11g15630
rosa_chinensis	RchiOBHm_Chr5g0048741
rosa_laevigata	RLG00000034556
rosa_multiflora	Rmu_co8087680.1_g000001 Rmu_sc0003675.1_g000001 Rmu_sc0006432.1_g000010 Rmu_sc0006432.1_g000011 Rmu_sc0011208.1_g000008 Rmu_sc0027077.1_g000001
rosa_roxburghii	Rroxscaffold_1G00033080
rosa_rugosa	Rorug05G0240900 Rorug05G0257800 Rorug05G0257900 Rorug05G0258000
rosa_samantha	Rh5AG320700 Rh5BG330500 Rh5CG356400 Rh5CG367600 Rh5DG341700
rosa_wichuraiana	Rw5G030150 Rw5G031200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2037
Acc36I	ACCTGC	1 cut(s)	1006
AccB1I	GGYRCC	1 cut(s)	2057
AccB7I	CCANNNNNTGG	1 cut(s)	653
AccII	CGCG	6 cut(s)	234, 236, 238, 735, 1837, 1898
AclWI	GGATC	3 cut(s)	992, 1166, 1695
AcoI	YGGCCR	2 cut(s)	712, 1261
AcsI	RAATTY	4 cut(s)	973, 1023, 1187, 1573
AcuI	CTGAAG	2 cut(s)	468, 573
AfaI	GTAC	6 cut(s)	13, 257, 432, 813, 1258, 1711
AfiI	CCNNNNNNNGG	6 cut(s)	202, 265, 653, 695, 721, 1328
AflIII	ACRYGT	2 cut(s)	23, 1987
AgsI	TTSAA	5 cut(s)	458, 477, 545, 917, 1614
AjiI	CACGTC	1 cut(s)	1990
AjnI	CCWGG	9 cut(s)	37, 304, 370, 958, 1042, 1237, 1774, 1882, 2065
AjuI	GAANNNNNNNTTGG	2 cut(s)	1546, 1578
Alw26I	GTCTC	4 cut(s)	83, 882, 1476, 1956
AlwI	GGATC	3 cut(s)	992, 1166, 1695
AlwNI	CAGNNNCTG	5 cut(s)	172, 554, 1175, 1532, 1565
AoxI	GGCC	5 cut(s)	302, 712, 1261, 1535, 2043
ApeKI	GCWGC	5 cut(s)	108, 172, 749, 1343, 1844
ApoI	RAATTY	4 cut(s)	973, 1023, 1187, 1573
Asp700I	GAANNNNTTC	1 cut(s)	150
AspA2I	CCTAGG	1 cut(s)	784
AspLEI	GCGC	4 cut(s)	236, 238, 737, 1839
AspS9I	GGNCC	8 cut(s)	53, 163, 302, 401, 1087, 1535, 1550, 1624
AsuC2I	CCSGG	1 cut(s)	1628
AsuHPI	GGTGA	9 cut(s)	133, 280, 352, 640, 1404, 1419, 1690, 1711, 1825
AvaII	GGWCC	6 cut(s)	53, 163, 401, 1087, 1550, 1624
AvrII	CCTAGG	1 cut(s)	784
BaeGI	GKGCMC	1 cut(s)	192
BalI	TGGCCA	2 cut(s)	714, 1263
BanI	GGYRCC	1 cut(s)	2057
BauI	CACGAG	2 cut(s)	680, 1725
BbsI	GAAGAC	3 cut(s)	141, 1142, 1772
BbvCI	CCTCAGC	1 cut(s)	2047
BbvI	GCAGC	5 cut(s)	120, 159, 761, 1355, 1856
BceAI	ACGGC	4 cut(s)	108, 238, 1086, 2067
BciT130I	CCWGG	9 cut(s)	39, 306, 372, 960, 1044, 1239, 1776, 1884, 2067
BciVI	GTATCC	1 cut(s)	324
BclI	TGATCA	1 cut(s)	1869
BcnI	CCSGG	1 cut(s)	1628
BcoDI	GTCTC	4 cut(s)	83, 882, 1476, 1956
BfaI	CTAG	4 cut(s)	785, 795, 1602, 2052
BfmI	CTRYAG	7 cut(s)	378, 555, 612, 758, 999, 1461, 1842
BfuAI	ACCTGC	1 cut(s)	1006
BfuI	GTATCC	1 cut(s)	324
BisI	GCNGC	9 cut(s)	109, 170, 173, 176, 204, 251, 750, 1344, 1845
BlnI	CCTAGG	1 cut(s)	784
BlsI	GCNGC	9 cut(s)	110, 171, 174, 177, 205, 252, 751, 1345, 1846
BmcAI	AGTACT	2 cut(s)	813, 1258
Bme18I	GGWCC	6 cut(s)	53, 163, 401, 1087, 1550, 1624
BmgBI	CACGTC	1 cut(s)	1990
BmgT120I	GGNCC	8 cut(s)	53, 163, 302, 401, 1087, 1535, 1550, 1624
BmiI	GGNNCC	6 cut(s)	54, 55, 687, 1089, 1626, 2059
BmsI	GCATC	9 cut(s)	190, 366, 412, 541, 772, 1433, 1468, 1532, 1785
BpiI	GAAGAC	3 cut(s)	141, 1142, 1772
BplI	GAGNNNNNCTC	2 cut(s)	663, 695
BpmI	CTGGAG	4 cut(s)	417, 836, 867, 891
Bpu10I	CCTNAGC	1 cut(s)	2047
BpuEI	CTTGAG	1 cut(s)	1919
BpuMI	CCSGG	1 cut(s)	1628
BsaJI	CCNNGG	5 cut(s)	57, 784, 882, 1702, 1883
BsaXI	ACNNNNNCTCC	8 cut(s)	352, 382, 840, 870, 1590, 1620, 1907, 1937
Bsc4I	CCNNNNNNNGG	6 cut(s)	202, 265, 653, 695, 721, 1328
Bse1I	ACTGG	7 cut(s)	400, 527, 750, 819, 1052, 1264, 1717
Bse3DI	GCAATG	2 cut(s)	766, 1393
BseBI	CCWGG	9 cut(s)	39, 306, 372, 960, 1044, 1239, 1776, 1884, 2067
BseDI	CCNNGG	5 cut(s)	57, 784, 882, 1702, 1883
BseLI	CCNNNNNNNGG	6 cut(s)	202, 265, 653, 695, 721, 1328
BseMI	GCAATG	2 cut(s)	766, 1393
BseMII	CTCAG	8 cut(s)	141, 146, 318, 1242, 1458, 1487, 1896, 2061
BseNI	ACTGG	7 cut(s)	400, 527, 750, 819, 1052, 1264, 1717
BsePI	GCGCGC	1 cut(s)	234
BseRI	GAGGAG	1 cut(s)	1285
BseSI	GKGCMC	1 cut(s)	192
BseXI	GCAGC	5 cut(s)	120, 159, 761, 1355, 1856
BseYI	CCCAGC	4 cut(s)	206, 1346, 1481, 1532
BsgI	GTGCAG	2 cut(s)	438, 1161
Bsh1236I	CGCG	6 cut(s)	234, 236, 238, 735, 1837, 1898
BshFI	GGCC	5 cut(s)	304, 714, 1263, 1537, 2045
BshNI	GGYRCC	1 cut(s)	2057
BsiSI	CCGG	1 cut(s)	1628
BslFI	GGGAC	8 cut(s)	66, 737, 908, 940, 1073, 1363, 1610, 1976
BslI	CCNNNNNNNGG	6 cut(s)	202, 265, 653, 695, 721, 1328
BsmAI	GTCTC	4 cut(s)	83, 882, 1476, 1956
BsmBI	CGTCTC	1 cut(s)	83
BsmFI	GGGAC	8 cut(s)	66, 737, 908, 940, 1073, 1363, 1610, 1976
BsmI	GAATGC	2 cut(s)	463, 1031
BsnI	GGCC	5 cut(s)	304, 714, 1263, 1537, 2045
Bsp1286I	GDGCHC	1 cut(s)	192
Bsp143I	GATC	5 cut(s)	123, 984, 1171, 1687, 1869
Bsp19I	CCATGG	1 cut(s)	882
BspANI	GGCC	5 cut(s)	304, 714, 1263, 1537, 2045
BspCNI	CTCAG	8 cut(s)	140, 147, 319, 1243, 1459, 1486, 1897, 2060
BspFNI	CGCG	6 cut(s)	234, 236, 238, 735, 1837, 1898
BspHI	TCATGA	1 cut(s)	1791
BspLI	GGNNCC	6 cut(s)	54, 55, 687, 1089, 1626, 2059
BspMAI	CTGCAG	2 cut(s)	1003, 1846
BspMI	ACCTGC	1 cut(s)	1006
BspPI	GGATC	3 cut(s)	992, 1166, 1695
BspQI	GCTCTTC	1 cut(s)	453
BspT107I	GGYRCC	1 cut(s)	2057
BsrDI	GCAATG	2 cut(s)	766, 1393
BsrI	ACTGG	7 cut(s)	400, 527, 750, 819, 1052, 1264, 1717
BssECI	CCNNGG	5 cut(s)	57, 784, 882, 1702, 1883
BssHII	GCGCGC	1 cut(s)	234
BssMI	GATC	5 cut(s)	123, 984, 1171, 1687, 1869
BssSI	CACGAG	2 cut(s)	680, 1725
BssT1I	CCWWGG	3 cut(s)	57, 784, 882
Bst2BI	CACGAG	2 cut(s)	680, 1725
Bst2UI	CCWGG	9 cut(s)	39, 306, 372, 960, 1044, 1239, 1776, 1884, 2067
Bst6I	CTCTTC	1 cut(s)	453
BstDEI	CTNAG	8 cut(s)	127, 155, 327, 1251, 1467, 1473, 1905, 2047
BstDSI	CCRYGG	1 cut(s)	882
BstFNI	CGCG	6 cut(s)	234, 236, 238, 735, 1837, 1898
BstHHI	GCGC	4 cut(s)	236, 238, 737, 1839
BstKTI	GATC	5 cut(s)	126, 987, 1174, 1690, 1872
BstMAI	GTCTC	4 cut(s)	83, 882, 1476, 1956
BstMBI	GATC	5 cut(s)	123, 984, 1171, 1687, 1869
BstMWI	GCNNNNNNNGC	6 cut(s)	114, 175, 290, 842, 1529, 2006
BstNI	CCWGG	9 cut(s)	39, 306, 372, 960, 1044, 1239, 1776, 1884, 2067
BstNSI	RCATGY	3 cut(s)	27, 1145, 1882
BstSFI	CTRYAG	7 cut(s)	378, 555, 612, 758, 999, 1461, 1842
BstSLI	GKGCMC	1 cut(s)	192
BstUI	CGCG	6 cut(s)	234, 236, 238, 735, 1837, 1898
BstV1I	GCAGC	5 cut(s)	120, 159, 761, 1355, 1856
BstV2I	GAAGAC	3 cut(s)	141, 1142, 1772
BstX2I	RGATCY	2 cut(s)	1171, 1687
BstXI	CCANNNNNNTGG	1 cut(s)	45
BstYI	RGATCY	2 cut(s)	1171, 1687
BsuI	GTATCC	1 cut(s)	324
BsuRI	GGCC	5 cut(s)	304, 714, 1263, 1537, 2045
BtgI	CCRYGG	1 cut(s)	882
BtrI	CACGTC	1 cut(s)	1990
BtsI	GCAGTG	2 cut(s)	432, 1339
BtsIMutI	CAGTG	9 cut(s)	183, 393, 432, 444, 534, 936, 1339, 1512, 1865
BveI	ACCTGC	1 cut(s)	1006
CaiI	CAGNNNCTG	5 cut(s)	172, 554, 1175, 1532, 1565
CciI	TCATGA	1 cut(s)	1791
CfoI	GCGC	4 cut(s)	236, 238, 737, 1839
Cfr13I	GGNCC	8 cut(s)	53, 163, 302, 401, 1087, 1535, 1550, 1624
CseI	GACGC	2 cut(s)	146, 252
CsiI	ACCWGGT	2 cut(s)	37, 1774
Csp6I	GTAC	6 cut(s)	12, 256, 431, 812, 1257, 1710
CspCI	CAANNNNNGTGG	2 cut(s)	1602, 1637
CviAII	CATG	9 cut(s)	24, 197, 883, 1076, 1142, 1787, 1792, 1879, 1940
CviQI	GTAC	6 cut(s)	12, 256, 431, 812, 1257, 1710
DdeI	CTNAG	8 cut(s)	127, 155, 327, 1251, 1467, 1473, 1905, 2047
DpnI	GATC	5 cut(s)	125, 986, 1173, 1689, 1871
DpnII	GATC	5 cut(s)	123, 984, 1171, 1687, 1869
DraI	TTTAAA	3 cut(s)	705, 972, 1164
EaeI	YGGCCR	2 cut(s)	712, 1261
Eam1104I	CTCTTC	1 cut(s)	453
EarI	CTCTTC	1 cut(s)	453
EciI	GGCGGA	2 cut(s)	236, 1088
Eco130I	CCWWGG	3 cut(s)	57, 784, 882
Eco32I	GATATC	1 cut(s)	1235
Eco47I	GGWCC	6 cut(s)	53, 163, 401, 1087, 1550, 1624
Eco57I	CTGAAG	2 cut(s)	468, 573
EcoO109I	RGGNCCY	1 cut(s)	53
EcoRII	CCWGG	9 cut(s)	37, 304, 370, 958, 1042, 1237, 1774, 1882, 2065
EcoRV	GATATC	1 cut(s)	1235
EcoT14I	CCWWGG	3 cut(s)	57, 784, 882
ErhI	CCWWGG	3 cut(s)	57, 784, 882
Esp3I	CGTCTC	1 cut(s)	83
FaeI	CATG	9 cut(s)	27, 200, 886, 1079, 1145, 1790, 1795, 1882, 1943
FaqI	GGGAC	8 cut(s)	66, 737, 908, 940, 1073, 1363, 1610, 1976
FatI	CATG	9 cut(s)	23, 196, 882, 1075, 1141, 1786, 1791, 1878, 1939
FauI	CCCGC	1 cut(s)	973
FbaI	TGATCA	1 cut(s)	1869
Fnu4HI	GCNGC	9 cut(s)	109, 170, 173, 176, 204, 251, 750, 1344, 1845
Fsp4HI	GCNGC	9 cut(s)	109, 170, 173, 176, 204, 251, 750, 1344, 1845
FspBI	CTAG	4 cut(s)	785, 795, 1602, 2052
GlaI	GCGC	4 cut(s)	235, 237, 736, 1838
GluI	GCNGC	9 cut(s)	109, 170, 173, 176, 204, 251, 750, 1344, 1845
GsaI	CCCAGC	4 cut(s)	210, 1350, 1485, 1536
GsuI	CTGGAG	4 cut(s)	417, 836, 867, 891
HaeIII	GGCC	5 cut(s)	304, 714, 1263, 1537, 2045
HapII	CCGG	1 cut(s)	1628
HgaI	GACGC	2 cut(s)	146, 252
HhaI	GCGC	4 cut(s)	236, 238, 737, 1839
Hin1II	CATG	9 cut(s)	27, 200, 886, 1079, 1145, 1790, 1795, 1882, 1943
Hin6I	GCGC	4 cut(s)	234, 236, 735, 1837
HinP1I	GCGC	4 cut(s)	234, 236, 735, 1837
HincII	GTYRAC	2 cut(s)	78, 564
HindII	GTYRAC	2 cut(s)	78, 564
HinfI	GANTC	7 cut(s)	68, 329, 473, 718, 725, 1469, 1888
HpaII	CCGG	1 cut(s)	1628
HphI	GGTGA	9 cut(s)	133, 280, 352, 640, 1404, 1419, 1690, 1711, 1825
Hpy166II	GTNNAC	3 cut(s)	78, 242, 564
Hpy188I	TCNGA	6 cut(s)	156, 298, 592, 1281, 1378, 1585
Hpy188III	TCNNGA	8 cut(s)	143, 333, 722, 779, 870, 993, 1475, 1792
Hpy8I	GTNNAC	3 cut(s)	78, 242, 564
Hpy99I	CGWCG	1 cut(s)	268
HpyAV	CCTTC	4 cut(s)	205, 265, 625, 1804
HpyCH4IV	ACGT	2 cut(s)	866, 1989
HpyF10VI	GCNNNNNNNGC	6 cut(s)	114, 175, 290, 842, 1529, 2006
HpyF3I	CTNAG	8 cut(s)	127, 155, 327, 1251, 1467, 1473, 1905, 2047
HpySE526I	ACGT	2 cut(s)	866, 1989
Hsp92II	CATG	9 cut(s)	27, 200, 886, 1079, 1145, 1790, 1795, 1882, 1943
HspAI	GCGC	4 cut(s)	234, 236, 735, 1837
KflI	GGGWCCC	1 cut(s)	53
Ksp22I	TGATCA	1 cut(s)	1869
Kzo9I	GATC	5 cut(s)	123, 984, 1171, 1687, 1869
LguI	GCTCTTC	1 cut(s)	453
LmnI	GCTCC	3 cut(s)	685, 1272, 1598
Lsp1109I	GCAGC	5 cut(s)	120, 159, 761, 1355, 1856
LweI	GCATC	9 cut(s)	190, 366, 412, 541, 772, 1433, 1468, 1532, 1785
MabI	ACCWGGT	2 cut(s)	37, 1774
MaeI	CTAG	4 cut(s)	785, 795, 1602, 2052
MaeII	ACGT	2 cut(s)	866, 1989
MaeIII	GTNAC	9 cut(s)	69, 181, 364, 388, 536, 619, 1410, 1732, 1813
MalI	GATC	5 cut(s)	125, 986, 1173, 1689, 1871
MauBI	CGCGCGCG	1 cut(s)	234
MboI	GATC	5 cut(s)	123, 984, 1171, 1687, 1869
MboII	GAAGA	7 cut(s)	146, 461, 470, 818, 1142, 1772, 1775
MfeI	CAATTG	1 cut(s)	651
MflI	RGATCY	2 cut(s)	1171, 1687
MhlI	GDGCHC	1 cut(s)	192
MlsI	TGGCCA	2 cut(s)	714, 1263
MluNI	TGGCCA	2 cut(s)	714, 1263
MlyI	GAGTC	4 cut(s)	77, 338, 719, 1478
MmeI	TCCRAC	6 cut(s)	665, 671, 753, 1186, 1259, 1293
Mox20I	TGGCCA	2 cut(s)	714, 1263
MroXI	GAANNNNTTC	1 cut(s)	150
MscI	TGGCCA	2 cut(s)	714, 1263
MseI	TTAA	8 cut(s)	32, 704, 971, 1163, 1217, 1286, 1875, 2086
MslI	CAYNNNNRTG	1 cut(s)	1877
Msp20I	TGGCCA	2 cut(s)	714, 1263
MspA1I	CMGCKG	3 cut(s)	169, 1346, 1619
MspI	CCGG	1 cut(s)	1628
MunI	CAATTG	1 cut(s)	651
Mva1269I	GAATGC	2 cut(s)	463, 1031
MvaI	CCWGG	9 cut(s)	39, 306, 372, 960, 1044, 1239, 1776, 1884, 2067
MvnI	CGCG	6 cut(s)	234, 236, 238, 735, 1837, 1898
MwoI	GCNNNNNNNGC	6 cut(s)	114, 175, 290, 842, 1529, 2006
NciI	CCSGG	1 cut(s)	1628
NcoI	CCATGG	1 cut(s)	882
NdeII	GATC	5 cut(s)	123, 984, 1171, 1687, 1869
NlaIII	CATG	9 cut(s)	27, 200, 886, 1079, 1145, 1790, 1795, 1882, 1943
NlaIV	GGNNCC	6 cut(s)	54, 55, 687, 1089, 1626, 2059
NmuCI	GTSAC	7 cut(s)	69, 181, 364, 536, 619, 1410, 1813
NspI	RCATGY	3 cut(s)	27, 1145, 1882
PaeI	GCATGC	1 cut(s)	1145
PagI	TCATGA	1 cut(s)	1791
PauI	GCGCGC	1 cut(s)	234
PciI	ACATGT	1 cut(s)	23
PciSI	GCTCTTC	1 cut(s)	453
PctI	GAATGC	2 cut(s)	463, 1031
PdmI	GAANNNNTTC	1 cut(s)	150
PfeI	GAWTC	3 cut(s)	473, 718, 1888
PflFI	GACNNNGTC	1 cut(s)	899
PflMI	CCANNNNNTGG	1 cut(s)	653
PfoI	TCCNGGA	2 cut(s)	370, 1626
PkrI	GCNGC	9 cut(s)	110, 171, 174, 177, 205, 252, 751, 1345, 1846
PleI	GAGTC	4 cut(s)	76, 337, 719, 1477
PpsI	GAGTC	4 cut(s)	76, 337, 719, 1477
PpuMI	RGGWCCY	1 cut(s)	53
PscI	ACATGT	1 cut(s)	23
PsiI	TTATAA	1 cut(s)	2037
Psp5II	RGGWCCY	1 cut(s)	53
Psp6I	CCWGG	9 cut(s)	37, 304, 370, 958, 1042, 1237, 1774, 1882, 2065
PspFI	CCCAGC	4 cut(s)	206, 1346, 1481, 1532
PspGI	CCWGG	9 cut(s)	37, 304, 370, 958, 1042, 1237, 1774, 1882, 2065
PspN4I	GGNNCC	6 cut(s)	54, 55, 687, 1089, 1626, 2059
PspPI	GGNCC	8 cut(s)	53, 163, 302, 401, 1087, 1535, 1550, 1624
PspPPI	RGGWCCY	1 cut(s)	53
PstI	CTGCAG	2 cut(s)	1003, 1846
PstNI	CAGNNNCTG	5 cut(s)	172, 554, 1175, 1532, 1565
PsuI	RGATCY	2 cut(s)	1171, 1687
PsyI	GACNNNGTC	1 cut(s)	899
PteI	GCGCGC	1 cut(s)	234
PvuII	CAGCTG	2 cut(s)	1346, 1619
RsaI	GTAC	6 cut(s)	13, 257, 432, 813, 1258, 1711
RsaNI	GTAC	6 cut(s)	12, 256, 431, 812, 1257, 1710
RseI	CAYNNNNRTG	1 cut(s)	1877
SapI	GCTCTTC	1 cut(s)	453
SaqAI	TTAA	8 cut(s)	32, 704, 971, 1163, 1217, 1286, 1875, 2086
SatI	GCNGC	9 cut(s)	109, 170, 173, 176, 204, 251, 750, 1344, 1845
Sau3AI	GATC	5 cut(s)	123, 984, 1171, 1687, 1869
Sau96I	GGNCC	8 cut(s)	53, 163, 302, 401, 1087, 1535, 1550, 1624
ScaI	AGTACT	2 cut(s)	813, 1258
SchI	GAGTC	4 cut(s)	77, 338, 719, 1478
SduI	GDGCHC	1 cut(s)	192
SexAI	ACCWGGT	2 cut(s)	37, 1774
SfaNI	GCATC	9 cut(s)	190, 366, 412, 541, 772, 1433, 1468, 1532, 1785
SfcI	CTRYAG	7 cut(s)	378, 555, 612, 758, 999, 1461, 1842
SinI	GGWCC	6 cut(s)	53, 163, 401, 1087, 1550, 1624
SmiMI	CAYNNNNRTG	1 cut(s)	1877
SmlI	CTYRAG	1 cut(s)	1934
SmoI	CTYRAG	1 cut(s)	1934
SphI	GCATGC	1 cut(s)	1145
SspI	AATATT	1 cut(s)	492
SspMI	CTAG	4 cut(s)	785, 795, 1602, 2052
StyI	CCWWGG	3 cut(s)	57, 784, 882
TaiI	ACGT	2 cut(s)	869, 1992
TaqI	TCGA	1 cut(s)	144
TatI	WGTACW	2 cut(s)	811, 1256
TauI	GCSGC	4 cut(s)	172, 178, 206, 253
TfiI	GAWTC	3 cut(s)	473, 718, 1888
Tru1I	TTAA	8 cut(s)	32, 704, 971, 1163, 1217, 1286, 1875, 2086
Tru9I	TTAA	8 cut(s)	32, 704, 971, 1163, 1217, 1286, 1875, 2086
TscAI	CASTG	9 cut(s)	190, 400, 432, 451, 534, 936, 1339, 1512, 1872
TseFI	GTSAC	7 cut(s)	69, 181, 364, 536, 619, 1410, 1813
TseI	GCWGC	5 cut(s)	108, 172, 749, 1343, 1844
Tsp45I	GTSAC	7 cut(s)	69, 181, 364, 536, 619, 1410, 1813
TspDTI	ATGAA	8 cut(s)	690, 819, 968, 1031, 1181, 1307, 1775, 1823
TspGWI	ACGGA	1 cut(s)	2030
TspRI	CASTG	9 cut(s)	190, 400, 432, 451, 534, 936, 1339, 1512, 1872
Tth111I	GACNNNGTC	1 cut(s)	899
Van91I	CCANNNNNTGG	1 cut(s)	653
VpaK11BI	GGWCC	6 cut(s)	53, 163, 401, 1087, 1550, 1624
XapI	RAATTY	4 cut(s)	973, 1023, 1187, 1573
XceI	RCATGY	3 cut(s)	27, 1145, 1882
XcmI	CCANNNNNNNNNTGG	1 cut(s)	203
XmaJI	CCTAGG	1 cut(s)	784
XmnI	GAANNNNTTC	1 cut(s)	150
XspI	CTAG	4 cut(s)	785, 795, 1602, 2052
ZrmI	AGTACT	2 cut(s)	813, 1258

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.