Rmu_sc0006432.1_g000011

Molybdopterin biosynthesis protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006432.1
Physical Location & Seq
Forward (+)
44206 .. 47847
3642 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006432.1_g000011.1.cds

Sequence Viewer

Length: 1095 bp
atgagaattagaaaactttttgcctttgggctgcctggaaatccagttagctgtcttgtctgcttccatctatttgtggtaccaaccatccgctttcttgctggatgggcagaccctttgcctttcagagtgcaggctcgccttctccagcctgtaaagacaaatccagtccgtccagaattccattctgctatcgtcagatgggagttaaatgtgggattgggtaatcctggctttgttgcggagggtactggccaccagagaagcagtaagattttaagtatgaagtctgctaatgcgttgttggagttgcctgcaacaggcagtgtaatgcctgctgggacttctgtcagttctgtgtcagccattattatttccgatataagtactgctgctattaataaaacttcctcattcccgggtccagcttctcatatggaaagatttagaacacaagaattatccatagctgagtctcgcgatgctgagtttagagtagctattcttaccgtgagtgatactgttgcatccggggctgggccggataggagtggtccaagggcagtttctgttgtaacttcttgttcagaaaggttgggaggagccaaggttgtttcaacggctgtggtgccagatgatgtaagcaaaattaaggatgttctgcagagatggaatgatatcgagaatatggatctcatcctcacccttggtggcactggatttaccccacgagatgtaactccagaagcaaccaaagagttgattgagaaagaaacacctggtcttcttcttgtcatgatgcaagagagtttaaaggtgacaccatttgctatgctctcccgtgctgcagcaggaataagagggtcaacattgatcatcaacatgccggggaatccaaatgcggttgctgagtgcatggaggctttgttgcctgccctcaagcatggattaaagcagataaagggagatgagagagaaaaacatcctcgacatgcccctcatgcgcaagctgcgtccatggatacttgggagcagagttataagttggcctcgggtactggtaaagactcgtctggttgttcttgttgccattaa

Protein Analysis

364

Amino Acids

38.91

Weight (kDa)

8.67

Isoelectric Point (pI)

39.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1041
Acc16I TGCGCA 1 cut(s) 1005
Acc65I GGTACC 1 cut(s) 79
AccB1I GGYRCC 2 cut(s) 79, 628
AccII CGCG 1 cut(s) 480
AciI CCGC 3 cut(s) 91, 242, 902
AclWI GGATC 1 cut(s) 699
AcoI YGGCCR 1 cut(s) 253
AcsI RAATTY 1 cut(s) 179
AfaI GTAC 4 cut(s) 81, 250, 388, 1057
AfiI CCNNNNNNNGG 2 cut(s) 320, 537
AgsI TTSAA 1 cut(s) 618
AjnI CCWGG 3 cut(s) 34, 229, 778
AjuI GAANNNNNNNTTGG 2 cut(s) 550, 582
AluBI AGCT 5 cut(s) 51, 428, 470, 500, 1010
AluI AGCT 5 cut(s) 51, 428, 470, 500, 1010
Alw26I GTCTC 1 cut(s) 480
AlwI GGATC 1 cut(s) 699
AlwNI CAGNNNCTG 1 cut(s) 569
Ama87I CYCGRG 2 cut(s) 418, 1051
AoxI GGCC 3 cut(s) 253, 539, 1047
ApeKI GCWGC 5 cut(s) 31, 392, 845, 848, 1010
ApoI RAATTY 1 cut(s) 179
AseI ATTAAT 1 cut(s) 399
Asp718I GGTACC 1 cut(s) 79
AspLEI GCGC 1 cut(s) 1006
AspS9I GGNCC 3 cut(s) 422, 539, 554
AsuC2I CCSGG 4 cut(s) 419, 420, 532, 888
AsuHPI GGTGA 2 cut(s) 694, 829
AvaI CYCGRG 2 cut(s) 418, 1051
AvaII GGWCC 2 cut(s) 422, 554
BalI TGGCCA 1 cut(s) 255
BanI GGYRCC 2 cut(s) 79, 628
BauI CACGAG 1 cut(s) 729
BbsI GAAGAC 1 cut(s) 776
BbvI GCAGC 5 cut(s) 18, 379, 832, 860, 997
BccI CCATC 5 cut(s) 75, 95, 99, 195, 663
BceAI ACGGC 1 cut(s) 636
BciT130I CCWGG 3 cut(s) 36, 231, 780
BciVI GTATCC 1 cut(s) 1015
BclI TGATCA 1 cut(s) 873
BcnI CCSGG 4 cut(s) 419, 420, 532, 888
BcoDI GTCTC 1 cut(s) 480
BfmI CTRYAG 2 cut(s) 662, 846
BfuI GTATCC 1 cut(s) 1015
BisI GCNGC 5 cut(s) 32, 393, 846, 849, 1011
BlsI GCNGC 5 cut(s) 33, 394, 847, 850, 1012
BmcAI AGTACT 1 cut(s) 388
Bme1390I CCNGG 7 cut(s) 36, 231, 419, 420, 532, 780, 888
Bme18I GGWCC 2 cut(s) 422, 554
BmeT110I CYCGRG 2 cut(s) 418, 1051
BmgT120I GGNCC 3 cut(s) 422, 539, 554
BmiI GGNNCC 4 cut(s) 81, 423, 604, 630
BmrFI CCNGG 7 cut(s) 36, 231, 419, 420, 532, 780, 888
BmsI GCATC 3 cut(s) 472, 536, 789
BoxI GACNNNNGTC 1 cut(s) 347
BpiI GAAGAC 1 cut(s) 776
BpmI CTGGAG 2 cut(s) 131, 726
BpuEI CTTGAG 1 cut(s) 923
BpuMI CCSGG 4 cut(s) 419, 420, 532, 888
BsaJI CCNNGG 8 cut(s) 418, 531, 557, 606, 706, 887, 1017, 1050
BsaXI ACNNNNNCTCC 4 cut(s) 594, 624, 911, 941
Bsc4I CCNNNNNNNGG 2 cut(s) 320, 537
Bse1I ACTGG 5 cut(s) 44, 167, 256, 721, 1063
BseBI CCWGG 3 cut(s) 36, 231, 780
BseDI CCNNGG 8 cut(s) 418, 531, 557, 606, 706, 887, 1017, 1050
BseGI GGATG 6 cut(s) 87, 110, 527, 661, 696, 982
BseLI CCNNNNNNNGG 2 cut(s) 320, 537
BseMII CTCAG 3 cut(s) 462, 477, 900
BseNI ACTGG 5 cut(s) 44, 167, 256, 721, 1063
BseRI GAGGAG 1 cut(s) 615
BseXI GCAGC 5 cut(s) 18, 379, 832, 860, 997
BseYI CCCAGC 2 cut(s) 338, 536
BsgI GTGCAG 1 cut(s) 152
Bsh1236I CGCG 1 cut(s) 480
BshFI GGCC 3 cut(s) 255, 541, 1049
BshNI GGYRCC 2 cut(s) 79, 628
BsiHKCI CYCGRG 2 cut(s) 418, 1051
BsiSI CCGG 4 cut(s) 419, 531, 542, 887
BslFI GGGAC 1 cut(s) 355
BslI CCNNNNNNNGG 2 cut(s) 320, 537
BsmAI GTCTC 1 cut(s) 480
BsmFI GGGAC 1 cut(s) 355
BsnI GGCC 3 cut(s) 255, 541, 1049
BsoBI CYCGRG 2 cut(s) 418, 1051
Bsp143I GATC 2 cut(s) 691, 873
Bsp19I CCATGG 1 cut(s) 1017
Bsp68I TCGCGA 1 cut(s) 480
BspACI CCGC 3 cut(s) 91, 242, 902
BspANI GGCC 3 cut(s) 255, 541, 1049
BspCNI CTCAG 3 cut(s) 463, 478, 901
BspFNI CGCG 1 cut(s) 480
BspHI TCATGA 1 cut(s) 795
BspLI GGNNCC 4 cut(s) 81, 423, 604, 630
BspMAI CTGCAG 2 cut(s) 666, 850
BspPI GGATC 1 cut(s) 699
BspT107I GGYRCC 2 cut(s) 79, 628
BsrI ACTGG 5 cut(s) 44, 167, 256, 721, 1063
BssECI CCNNGG 8 cut(s) 418, 531, 557, 606, 706, 887, 1017, 1050
BssMI GATC 2 cut(s) 691, 873
BssSI CACGAG 1 cut(s) 729
BssT1I CCWWGG 4 cut(s) 557, 606, 706, 1017
Bst2BI CACGAG 1 cut(s) 729
Bst2UI CCWGG 3 cut(s) 36, 231, 780
Bst4CI ACNGT 2 cut(s) 511, 523
BstC8I GCNNGC 6 cut(s) 135, 139, 315, 336, 933, 1008
BstDEI CTNAG 3 cut(s) 471, 486, 909
BstDSI CCRYGG 1 cut(s) 1017
BstENI CCTNNNNNAGG 1 cut(s) 318
BstF5I GGATG 6 cut(s) 87, 110, 527, 661, 696, 982
BstFNI CGCG 1 cut(s) 480
BstHHI GCGC 1 cut(s) 1006
BstKTI GATC 2 cut(s) 694, 876
BstMAI GTCTC 1 cut(s) 480
BstMBI GATC 2 cut(s) 691, 873
BstMWI GCNNNNNNNGC 4 cut(s) 107, 533, 1001, 1010
BstNI CCWGG 3 cut(s) 36, 231, 780
BstNSI RCATGY 2 cut(s) 886, 995
BstPAI GACNNNNGTC 1 cut(s) 347
BstSCI CCNGG 7 cut(s) 34, 229, 417, 418, 530, 778, 886
BstSFI CTRYAG 2 cut(s) 662, 846
BstUI CGCG 1 cut(s) 480
BstV1I GCAGC 5 cut(s) 18, 379, 832, 860, 997
BstV2I GAAGAC 1 cut(s) 776
BstX2I RGATCY 1 cut(s) 691
BstYI RGATCY 1 cut(s) 691
BsuI GTATCC 1 cut(s) 1015
BsuRI GGCC 3 cut(s) 255, 541, 1049
BtgI CCRYGG 1 cut(s) 1017
BtgZI GCGATG 1 cut(s) 495
BtsCI GGATG 6 cut(s) 87, 110, 527, 661, 696, 982
BtsI GCAGTG 1 cut(s) 331
BtsIMutI CAGTG 2 cut(s) 331, 714
BtuMI TCGCGA 1 cut(s) 480
Cac8I GCNNGC 6 cut(s) 135, 139, 315, 336, 933, 1008
CaiI CAGNNNCTG 1 cut(s) 569
CciI TCATGA 1 cut(s) 795
CfoI GCGC 1 cut(s) 1006
Cfr13I GGNCC 3 cut(s) 422, 539, 554
Cfr9I CCCGGG 1 cut(s) 418
CseI GACGC 1 cut(s) 1002
CsiI ACCWGGT 1 cut(s) 778
Csp6I GTAC 4 cut(s) 80, 249, 387, 1056
CspCI CAANNNNNGTGG 2 cut(s) 606, 641
CviAII CATG 7 cut(s) 796, 883, 916, 944, 992, 1001, 1018
CviQI GTAC 4 cut(s) 80, 249, 387, 1056
DdeI CTNAG 3 cut(s) 471, 486, 909
DpnI GATC 2 cut(s) 693, 875
DpnII GATC 2 cut(s) 691, 873
DraI TTTAAA 1 cut(s) 813
EaeI YGGCCR 1 cut(s) 253
Eco130I CCWWGG 4 cut(s) 557, 606, 706, 1017
Eco32I GATATC 1 cut(s) 679
Eco47I GGWCC 2 cut(s) 422, 554
Eco88I CYCGRG 2 cut(s) 418, 1051
EcoNI CCTNNNNNAGG 1 cut(s) 318
EcoRI GAATTC 1 cut(s) 179
EcoRII CCWGG 3 cut(s) 34, 229, 778
EcoRV GATATC 1 cut(s) 679
EcoT14I CCWWGG 4 cut(s) 557, 606, 706, 1017
ErhI CCWWGG 4 cut(s) 557, 606, 706, 1017
FaeI CATG 7 cut(s) 799, 886, 919, 947, 995, 1004, 1021
FaqI GGGAC 1 cut(s) 355
FatI CATG 7 cut(s) 795, 882, 915, 943, 991, 1000, 1017
FauNDI CATATG 1 cut(s) 435
FbaI TGATCA 1 cut(s) 873
Fnu4HI GCNGC 5 cut(s) 32, 393, 846, 849, 1011
FokI GGATG 6 cut(s) 74, 117, 514, 668, 683, 969
Fsp4HI GCNGC 5 cut(s) 32, 393, 846, 849, 1011
FspI TGCGCA 1 cut(s) 1005
GlaI GCGC 1 cut(s) 1005
GluI GCNGC 5 cut(s) 32, 393, 846, 849, 1011
GsaI CCCAGC 2 cut(s) 342, 540
GsuI CTGGAG 2 cut(s) 131, 726
HaeIII GGCC 3 cut(s) 255, 541, 1049
HapII CCGG 4 cut(s) 419, 531, 542, 887
HgaI GACGC 1 cut(s) 1002
HhaI GCGC 1 cut(s) 1006
Hin1II CATG 7 cut(s) 799, 886, 919, 947, 995, 1004, 1021
Hin6I GCGC 1 cut(s) 1004
HinP1I GCGC 1 cut(s) 1004
HincII GTYRAC 1 cut(s) 867
HindII GTYRAC 1 cut(s) 867
HinfI GANTC 3 cut(s) 473, 892, 1067
HpaII CCGG 4 cut(s) 419, 531, 542, 887
HphI GGTGA 2 cut(s) 694, 829
Hpy166II GTNNAC 1 cut(s) 867
Hpy188I TCNGA 4 cut(s) 128, 200, 379, 589
Hpy188III TCNNGA 5 cut(s) 176, 479, 682, 743, 796
Hpy8I GTNNAC 1 cut(s) 867
HpyAV CCTTC 1 cut(s) 152
HpyCH4III ACNGT 2 cut(s) 511, 523
HpyCH4V TGCA 7 cut(s) 133, 317, 527, 664, 802, 848, 915
HpyF10VI GCNNNNNNNGC 4 cut(s) 107, 533, 1001, 1010
HpyF3I CTNAG 3 cut(s) 471, 486, 909
Hsp92II CATG 7 cut(s) 799, 886, 919, 947, 995, 1004, 1021
HspAI GCGC 1 cut(s) 1004
KpnI GGTACC 1 cut(s) 83
Ksp22I TGATCA 1 cut(s) 873
Kzo9I GATC 2 cut(s) 691, 873
LmnI GCTCC 2 cut(s) 602, 1030
Lsp1109I GCAGC 5 cut(s) 18, 379, 832, 860, 997
LweI GCATC 3 cut(s) 472, 536, 789
MabI ACCWGGT 1 cut(s) 778
MaeIII GTNAC 3 cut(s) 574, 736, 817
MalI GATC 2 cut(s) 693, 875
MboI GATC 2 cut(s) 691, 873
MboII GAAGA 2 cut(s) 776, 779
MflI RGATCY 1 cut(s) 691
MlsI TGGCCA 1 cut(s) 255
MluCI AATT 4 cut(s) 6, 179, 458, 648
MluNI TGGCCA 1 cut(s) 255
MlyI GAGTC 2 cut(s) 482, 1061
MmeI TCCRAC 1 cut(s) 285
Mox20I TGGCCA 1 cut(s) 255
MscI TGGCCA 1 cut(s) 255
MseI TTAA 7 cut(s) 209, 278, 399, 651, 812, 950, 1093
MslI CAYNNNNRTG 1 cut(s) 881
Msp20I TGGCCA 1 cut(s) 255
MspI CCGG 4 cut(s) 419, 531, 542, 887
MspR9I CCNGG 7 cut(s) 36, 231, 419, 420, 532, 780, 888
MvaI CCWGG 3 cut(s) 36, 231, 780
MvnI CGCG 1 cut(s) 480
MwoI GCNNNNNNNGC 4 cut(s) 107, 533, 1001, 1010
NciI CCSGG 4 cut(s) 419, 420, 532, 888
NcoI CCATGG 1 cut(s) 1017
NdeI CATATG 1 cut(s) 435
NdeII GATC 2 cut(s) 691, 873
NlaIII CATG 7 cut(s) 799, 886, 919, 947, 995, 1004, 1021
NlaIV GGNNCC 4 cut(s) 81, 423, 604, 630
NmuCI GTSAC 1 cut(s) 817
NruI TCGCGA 1 cut(s) 480
NsbI TGCGCA 1 cut(s) 1005
NspI RCATGY 2 cut(s) 886, 995
PagI TCATGA 1 cut(s) 795
PfeI GAWTC 1 cut(s) 892
PkrI GCNGC 5 cut(s) 33, 394, 847, 850, 1012
PleI GAGTC 2 cut(s) 481, 1061
PpsI GAGTC 2 cut(s) 481, 1061
PshAI GACNNNNGTC 1 cut(s) 347
PshBI ATTAAT 1 cut(s) 399
PsiI TTATAA 1 cut(s) 1041
Psp6I CCWGG 3 cut(s) 34, 229, 778
PspFI CCCAGC 2 cut(s) 338, 536
PspGI CCWGG 3 cut(s) 34, 229, 778
PspN4I GGNNCC 4 cut(s) 81, 423, 604, 630
PspPI GGNCC 3 cut(s) 422, 539, 554
PstI CTGCAG 2 cut(s) 666, 850
PstNI CAGNNNCTG 1 cut(s) 569
PsuI RGATCY 1 cut(s) 691
RruI TCGCGA 1 cut(s) 480
RsaI GTAC 4 cut(s) 81, 250, 388, 1057
RsaNI GTAC 4 cut(s) 80, 249, 387, 1056
RseI CAYNNNNRTG 1 cut(s) 881
SaqAI TTAA 7 cut(s) 209, 278, 399, 651, 812, 950, 1093
SatI GCNGC 5 cut(s) 32, 393, 846, 849, 1011
Sau3AI GATC 2 cut(s) 691, 873
Sau96I GGNCC 3 cut(s) 422, 539, 554
ScaI AGTACT 1 cut(s) 388
SchI GAGTC 2 cut(s) 482, 1061
ScrFI CCNGG 7 cut(s) 36, 231, 419, 420, 532, 780, 888
SetI ASST 9 cut(s) 53, 430, 472, 502, 596, 612, 781, 819, 1012
SexAI ACCWGGT 1 cut(s) 778
SfaNI GCATC 3 cut(s) 472, 536, 789
SfcI CTRYAG 2 cut(s) 662, 846
SinI GGWCC 2 cut(s) 422, 554
SmaI CCCGGG 1 cut(s) 420
SmiMI CAYNNNNRTG 1 cut(s) 881
SmlI CTYRAG 1 cut(s) 938
SmoI CTYRAG 1 cut(s) 938
Sse9I AATT 4 cut(s) 6, 179, 458, 648
SsiI CCGC 3 cut(s) 91, 242, 902
StyD4I CCNGG 7 cut(s) 34, 229, 417, 418, 530, 778, 886
StyI CCWWGG 4 cut(s) 557, 606, 706, 1017
TaaI ACNGT 2 cut(s) 511, 523
TaqI TCGA 2 cut(s) 681, 988
TasI AATT 4 cut(s) 6, 179, 458, 648
TatI WGTACW 1 cut(s) 386
TfiI GAWTC 1 cut(s) 892
Tru1I TTAA 7 cut(s) 209, 278, 399, 651, 812, 950, 1093
Tru9I TTAA 7 cut(s) 209, 278, 399, 651, 812, 950, 1093
TscAI CASTG 2 cut(s) 331, 721
TseFI GTSAC 1 cut(s) 817
TseI GCWGC 5 cut(s) 31, 392, 845, 848, 1010
Tsp45I GTSAC 1 cut(s) 817
TspDTI ATGAA 1 cut(s) 299
TspGWI ACGGA 1 cut(s) 161
TspMI CCCGGG 1 cut(s) 418
TspRI CASTG 2 cut(s) 331, 721
VpaK11BI GGWCC 2 cut(s) 422, 554
VspI ATTAAT 1 cut(s) 399
XagI CCTNNNNNAGG 1 cut(s) 318
XapI RAATTY 1 cut(s) 179
XceI RCATGY 2 cut(s) 886, 995
XmaI CCCGGG 1 cut(s) 418
ZrmI AGTACT 1 cut(s) 388
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.