Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0004056

Physical Location & Seq

Genomic Coordinates Forward (+)

41867964 .. 41877268

Gene Structure 9305 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG356400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2004 bp

ATGATGGCGGAGACCAAACCAGCAATGCTCTCCGCGGAGGAGGCTCTGGAAATAGTTCTGAGAGTTATCCAGCGGCTGCCACCTGTCACGGTGCCCCTCCACGATGCCCTCGGAAAAGTCTTGGCCGAGGACATTCGCGCCGGCGACCCTTTGCCTCATTTCCCTGCATCCATCAAGGATGGATATGCAGTGGTAGCTTTAGATGGGCCTGGAGAGTATCCTATAGTTGGTGAGGCAAGAGCCGGTACCGATGGAATCGGCGTCACTGTCACCCCTGGGACTGTGGCATATGTTACTACTAGAGGACCGATACCTGATGGTGCTGATGCAGTTGTACAAGTTGAGGACACTGAACAGGTGCATGTGCATTCACATGAATCAAAGCGAGTGAAAATACTGGTACAGACGAGCAAAGGAGTTGATATCCGTCCAGTGGGATGTGACGTTGAGAAAGATGATGTAGTATTGATATCTGGACAAAGAATTGGTGCTGCAGAAATTGGTATACTTGCTACTGTTGGAAGGACAATGGTGAAGGTATATCCCACTCCAAAAATCGGTGTGCTTTCCACGGGAGATGAACTTATAGAGCTAACAACAGGTTGTCTGAGTCGCGGCCAGATCAGGGACTCCAACCGTGCTATGATAATGGCAGCTTCACTACAGCATCATTGTGAAGTTAGTGATTTCGGCATAACTAGAGATGATGAAGAAGGACTCGAAAAGACCATAGATACTATCATTTCTGCTGGAATTGATATTCTTCTCACCTCTGGAGGTGTTTCTATGGGAGATAAGGACTTTGTCAAACCACTGTTGCATAAGAAAGGGGCAGTGCATTTCAGTAAGGTGTGGATGAAACCAGGGAAACCCTTGACTTTCGCGGAGATCAATTCTGAACCGGCAGATAAAATGAGAATGAGAAAACTTTTTGCGTTTGGGCTGCCTGGAAATCCAGTTAGCTGTCTTGTCTGCTTCCATCTATTTGTGGTACCAACCATCCGTTTTCTTGCTGGATGGGCAGACCCTTTGCCTTTTAGAGTGCAGGCTCGCCTTCTCCAGCCTGTAAAGACAGATCCAGTCCGTCCAGAATTCCATTCTGCTATCGTCAAATGGGAGTTGAATAAGGGATTGGGTAATCCTGGCTTTGTTGCGGAGAGTACTGGCCACCAGAGAAGCAATAAGATTTTAAGTATGAACGTGTCATCTGCTAATGCGTTGTTGGAGTTTCCTGCAACAGGCAGTGTAATGCCCGCTGGGACTTCTGTGTCAGCCATTATTATTTCCGATATAAGTACTGCTGCTATTAATAAAACTTCCTCATCCCCGGATCCAGCTTCTCATATAGAAAGATTTAGAACACAAGAATTATCCGTAGCTGAGTCTCGCGATGCTGAGTTTAGAGTAGCTATTCTTACCATGAGTGATACTGTTGCATCCGGGGCTGGGCGGGATAGGAGTGGTCCAAGGGCAGTTTCTGTTGTAACTTCTTGTTCAGAAAGGTTGGGAGGAGCCAAGGTTGTTTCAACGGCTGTGGTACCAGATGATGTAAGCAAAATTAAGGATGTTCTGCAGAGATGGAGTGATATCGAGAATATGGATCTCATCCTCACCCTTGGTGGCACTGGATTTACCCCCCGAGATGTAACTCCAGAAGCAACCAAAGAGTTGATTGAGAAAGAAACACCTGGTCTTCTTCTTGTCATGATGCAAGAGAGTTTAAAGGTGACACCATTTGCTATGCTCTCCCGTGCTGCAGCAGGAATAAGAGGGTCAACATTGATCATCAACATGCCGGGGAATCCAAATGCGGTTGCTGAGTGCATGGAGGCTTTGTTGCCTGCCCTCAAGCATGGATTAAAGCAGATAAAGGGTGATAAGAGAGAAAAACATCCTCGACATGTCCCTCATGCGCAAGCTGCGTCCATGGATACTTGGAAGCAGAGTTATAAGTTGGCCTCGGGTACTGGTAAAGACTCGTCTGGTTGTTCTTGTTGCCATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006163 GO:0006464 GO:0006725 GO:0006732 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008940 GO:0009058 GO:0009116 GO:0009117 GO:0009119 GO:0009141 GO:0009144 GO:0009150 GO:0009199 GO:0009205 GO:0009259 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0016491 GO:0016661 GO:0016740 GO:0016772 GO:0016779 GO:0018130 GO:0018315 GO:0019538 GO:0019637 GO:0019693 GO:0023052 GO:0030151 GO:0032324 GO:0032870 GO:0034641 GO:0036211 GO:0042040 GO:0042221 GO:0042278 GO:0043167 GO:0043169 GO:0043170 GO:0043412 GO:0043545 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046039 GO:0046128 GO:0046483 GO:0046872 GO:0046914 GO:0050789 GO:0050794 GO:0050896 GO:0051186 GO:0051188 GO:0051189 GO:0051716 GO:0055086 GO:0055114 GO:0061598 GO:0061599 GO:0065007 GO:0070566 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071704 GO:0072521 GO:0090407 GO:1901068 GO:1901135 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657

KEGG Pathways

Metabolic & Signaling

ko00790 ko01100 ko04727 map00790 map01100 map04727

Pfam Domains

Protein Families

MoCF_biosynth MoeA_C MoeA_N

Protein Analysis

667

Amino Acids

71.28

Weight (kDa)

6.43

Isoelectric Point (pI)

35.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MoeA_N	PF03453	10 - 174	1.9e-37	MoeA N-terminal region (domain I and II)
MoCF_biosynth	PF00994	187 - 335	9.8e-28	Probable molybdopterin binding domain
MoCF_biosynth	PF00994	470 - 618	9.5e-31	Probable molybdopterin binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004056)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G20990 AT5G20990 AT5G20990
fragaria_vesca	FvH4_3g26260 FvH4_3g26260 FvH4_3g26260 FvH4_3g26260 FvH4_3g26260
malus_domestica	MD11G1181200.v1.1
prunus_persica	Prupe.6G153900_v2.0.a1 Prupe.6G153900_v2.0.a1
pyrus_communis	pycom03g11700 pycom11g15630
rosa_chinensis	RchiOBHm_Chr5g0048741
rosa_laevigata	RLG00000034556
rosa_multiflora	Rmu_co8087680.1_g000001 Rmu_sc0003675.1_g000001 Rmu_sc0006432.1_g000010 Rmu_sc0006432.1_g000011 Rmu_sc0011208.1_g000008 Rmu_sc0027077.1_g000001
rosa_roxburghii	Rroxscaffold_1G00033080
rosa_rugosa	Rorug05G0240900 Rorug05G0257800 Rorug05G0257900 Rorug05G0258000
rosa_samantha	Rh5AG320700 Rh5BG330500 Rh5CG356400 Rh5CG367600 Rh5DG341700
rosa_wichuraiana	Rw5G030150 Rw5G031200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1950
AasI	GACNNNNNNGTC	1 cut(s)	1267
Acc16I	TGCGCA	1 cut(s)	1914
Acc65I	GGTACC	3 cut(s)	245, 991, 1537
AccB1I	GGYRCC	4 cut(s)	91, 245, 991, 1537
AccI	GTMKAC	1 cut(s)	505
AccII	CGCG	5 cut(s)	35, 138, 615, 884, 1389
AclWI	GGATC	4 cut(s)	1070, 1325, 1338, 1608
AcoI	YGGCCR	3 cut(s)	123, 616, 1165
AcsI	RAATTY	1 cut(s)	1091
AcyI	GRCGYC	1 cut(s)	261
AfaI	GTAC	8 cut(s)	247, 336, 402, 993, 1162, 1297, 1539, 1966
AfiI	CCNNNNNNNGG	6 cut(s)	227, 433, 557, 625, 1238, 1446
AflIII	ACRYGT	2 cut(s)	1200, 1900
AgsI	TTSAA	2 cut(s)	1123, 1527
AjnI	CCWGG	6 cut(s)	208, 274, 862, 946, 1141, 1687
AjuI	GAANNNNNNNTTGG	4 cut(s)	1115, 1147, 1459, 1491
AluBI	AGCT	8 cut(s)	197, 592, 656, 963, 1337, 1379, 1409, 1919
AluI	AGCT	8 cut(s)	197, 592, 656, 963, 1337, 1379, 1409, 1919
Alw26I	GTCTC	2 cut(s)	5, 1389
AlwI	GGATC	4 cut(s)	1070, 1325, 1338, 1608
AlwNI	CAGNNNCTG	2 cut(s)	76, 1478
Ama87I	CYCGRG	2 cut(s)	1638, 1960
AoxI	GGCC	5 cut(s)	123, 206, 616, 1165, 1956
ApeKI	GCWGC	8 cut(s)	76, 491, 653, 943, 1301, 1754, 1757, 1919
ApoI	RAATTY	1 cut(s)	1091
AseI	ATTAAT	1 cut(s)	1308
Asp700I	GAANNNNTTC	1 cut(s)	54
Asp718I	GGTACC	3 cut(s)	245, 991, 1537
AspLEI	GCGC	2 cut(s)	140, 1915
AspS9I	GGNCC	3 cut(s)	206, 305, 1463
AsuC2I	CCSGG	3 cut(s)	1328, 1441, 1797
AsuHPI	GGTGA	7 cut(s)	242, 262, 544, 760, 1603, 1738, 1886
AvaI	CYCGRG	2 cut(s)	1638, 1960
AvaII	GGWCC	2 cut(s)	305, 1463
BaeGI	GKGCMC	1 cut(s)	96
BalI	TGGCCA	1 cut(s)	1167
BamHI	GGATCC	1 cut(s)	1330
BanI	GGYRCC	4 cut(s)	91, 245, 991, 1537
BbsI	GAAGAC	1 cut(s)	1685
BbvI	GCAGC	8 cut(s)	63, 478, 665, 930, 1288, 1741, 1769, 1906
BccI	CCATC	9 cut(s)	173, 179, 197, 245, 311, 987, 1007, 1011, 1572
BceAI	ACGGC	1 cut(s)	1545
BciT130I	CCWGG	6 cut(s)	210, 276, 864, 948, 1143, 1689
BciVI	GTATCC	2 cut(s)	228, 1924
BclI	TGATCA	1 cut(s)	1782
BcnI	CCSGG	3 cut(s)	1328, 1441, 1797
BcoDI	GTCTC	2 cut(s)	5, 1389
BfaI	CTAG	2 cut(s)	300, 699
BfmI	CTRYAG	5 cut(s)	222, 492, 662, 1571, 1755
BfuI	GTATCC	2 cut(s)	228, 1924
BmcAI	AGTACT	2 cut(s)	1162, 1297
Bme1390I	CCNGG	9 cut(s)	210, 276, 864, 948, 1143, 1328, 1441, 1689, 1797
Bme18I	GGWCC	2 cut(s)	305, 1463
BmeT110I	CYCGRG	2 cut(s)	1638, 1960
BmgT120I	GGNCC	3 cut(s)	206, 305, 1463
BmiI	GGNNCC	6 cut(s)	93, 247, 993, 1332, 1513, 1539
BmrFI	CCNGG	9 cut(s)	210, 276, 864, 948, 1143, 1328, 1441, 1689, 1797
BmsI	GCATC	7 cut(s)	94, 176, 316, 676, 1381, 1445, 1698
BpiI	GAAGAC	1 cut(s)	1685
BpmI	CTGGAG	4 cut(s)	231, 795, 1043, 1635
BpuEI	CTTGAG	1 cut(s)	1832
BpuMI	CCSGG	3 cut(s)	1328, 1441, 1797
BsaHI	GRCGYC	1 cut(s)	261
BsaI	GGTCTC	1 cut(s)	5
BsaXI	ACNNNNNCTCC	4 cut(s)	1503, 1533, 1820, 1850
Bsc4I	CCNNNNNNNGG	6 cut(s)	227, 433, 557, 625, 1238, 1446
Bse118I	RCCGGY	3 cut(s)	140, 242, 901
Bse1I	ACTGG	7 cut(s)	402, 431, 956, 1079, 1168, 1630, 1972
Bse3DI	GCAATG	1 cut(s)	30
BseBI	CCWGG	6 cut(s)	210, 276, 864, 948, 1143, 1689
BseLI	CCNNNNNNNGG	6 cut(s)	227, 433, 557, 625, 1238, 1446
BseMI	GCAATG	1 cut(s)	30
BseMII	CTCAG	5 cut(s)	50, 599, 1371, 1386, 1809
BseNI	ACTGG	7 cut(s)	402, 431, 956, 1079, 1168, 1630, 1972
BseRI	GAGGAG	2 cut(s)	53, 1524
BseSI	GKGCMC	1 cut(s)	96
BseXI	GCAGC	8 cut(s)	63, 478, 665, 930, 1288, 1741, 1769, 1906
BseYI	CCCAGC	2 cut(s)	1256, 1445
BsgI	GTGCAG	1 cut(s)	1064
Bsh1236I	CGCG	5 cut(s)	35, 138, 615, 884, 1389
BshFI	GGCC	5 cut(s)	125, 208, 618, 1167, 1958
BshNI	GGYRCC	4 cut(s)	91, 245, 991, 1537
BsiHKCI	CYCGRG	2 cut(s)	1638, 1960
BsiSI	CCGG	6 cut(s)	141, 243, 902, 1328, 1440, 1796
BslFI	GGGAC	4 cut(s)	292, 641, 1273, 1889
BslI	CCNNNNNNNGG	6 cut(s)	227, 433, 557, 625, 1238, 1446
BsmAI	GTCTC	2 cut(s)	5, 1389
BsmFI	GGGAC	4 cut(s)	292, 641, 1273, 1889
BsmI	GAATGC	1 cut(s)	367
BsnI	GGCC	5 cut(s)	125, 208, 618, 1167, 1958
Bso31I	GGTCTC	1 cut(s)	5
BsoBI	CYCGRG	2 cut(s)	1638, 1960
Bsp1286I	GDGCHC	1 cut(s)	96
Bsp1407I	TGTACA	1 cut(s)	334
Bsp143I	GATC	6 cut(s)	621, 888, 1075, 1330, 1600, 1782
Bsp19I	CCATGG	1 cut(s)	1926
Bsp68I	TCGCGA	1 cut(s)	1389
BspANI	GGCC	5 cut(s)	125, 208, 618, 1167, 1958
BspCNI	CTCAG	5 cut(s)	51, 600, 1372, 1387, 1810
BspFNI	CGCG	5 cut(s)	35, 138, 615, 884, 1389
BspHI	TCATGA	1 cut(s)	1704
BspLI	GGNNCC	6 cut(s)	93, 247, 993, 1332, 1513, 1539
BspMAI	CTGCAG	3 cut(s)	496, 1575, 1759
BspPI	GGATC	4 cut(s)	1070, 1325, 1338, 1608
BspT107I	GGYRCC	4 cut(s)	91, 245, 991, 1537
BspTNI	GGTCTC	1 cut(s)	5
BsrDI	GCAATG	1 cut(s)	30
BsrFI	RCCGGY	3 cut(s)	140, 242, 901
BsrGI	TGTACA	1 cut(s)	334
BsrI	ACTGG	7 cut(s)	402, 431, 956, 1079, 1168, 1630, 1972
BssAI	RCCGGY	3 cut(s)	140, 242, 901
BssMI	GATC	6 cut(s)	621, 888, 1075, 1330, 1600, 1782
BssNAI	GTATAC	1 cut(s)	506
BssNI	GRCGYC	1 cut(s)	261
BssT1I	CCWWGG	4 cut(s)	1466, 1515, 1615, 1926
Bst1107I	GTATAC	1 cut(s)	506
Bst2UI	CCWGG	6 cut(s)	210, 276, 864, 948, 1143, 1689
Bst4CI	ACNGT	7 cut(s)	91, 268, 283, 517, 638, 816, 1432
BstACI	GRCGYC	1 cut(s)	261
BstAUI	TGTACA	1 cut(s)	334
BstC8I	GCNNGC	6 cut(s)	142, 1047, 1051, 1254, 1842, 1917
BstDEI	CTNAG	5 cut(s)	59, 608, 1380, 1395, 1818
BstDSI	CCRYGG	3 cut(s)	33, 570, 1926
BstENI	CCTNNNNNAGG	1 cut(s)	1236
BstFNI	CGCG	5 cut(s)	35, 138, 615, 884, 1389
BstHHI	GCGC	2 cut(s)	140, 1915
BstKTI	GATC	6 cut(s)	624, 891, 1078, 1333, 1603, 1785
BstMAI	GTCTC	2 cut(s)	5, 1389
BstMBI	GATC	6 cut(s)	621, 888, 1075, 1330, 1600, 1782
BstMWI	GCNNNNNNNGC	5 cut(s)	41, 194, 1019, 1442, 1919
BstNI	CCWGG	6 cut(s)	210, 276, 864, 948, 1143, 1689
BstNSI	RCATGY	3 cut(s)	365, 1795, 1904
BstSCI	CCNGG	9 cut(s)	208, 274, 862, 946, 1141, 1326, 1439, 1687, 1795
BstSFI	CTRYAG	5 cut(s)	222, 492, 662, 1571, 1755
BstSLI	GKGCMC	1 cut(s)	96
BstUI	CGCG	5 cut(s)	35, 138, 615, 884, 1389
BstV1I	GCAGC	8 cut(s)	63, 478, 665, 930, 1288, 1741, 1769, 1906
BstV2I	GAAGAC	1 cut(s)	1685
BstX2I	RGATCY	3 cut(s)	1075, 1330, 1600
BstYI	RGATCY	3 cut(s)	1075, 1330, 1600
BstZ17I	GTATAC	1 cut(s)	506
BsuI	GTATCC	2 cut(s)	228, 1924
BsuRI	GGCC	5 cut(s)	125, 208, 618, 1167, 1958
BtgI	CCRYGG	3 cut(s)	33, 570, 1926
BtgZI	GCGATG	1 cut(s)	1404
BtsI	GCAGTG	3 cut(s)	195, 840, 1249
BtsIMutI	CAGTG	8 cut(s)	195, 264, 348, 438, 812, 840, 1249, 1623
BtuMI	TCGCGA	1 cut(s)	1389
Cac8I	GCNNGC	6 cut(s)	142, 1047, 1051, 1254, 1842, 1917
CaiI	CAGNNNCTG	2 cut(s)	76, 1478
CciI	TCATGA	1 cut(s)	1704
CfoI	GCGC	2 cut(s)	140, 1915
Cfr10I	RCCGGY	3 cut(s)	140, 242, 901
Cfr13I	GGNCC	3 cut(s)	206, 305, 1463
Cfr42I	CCGCGG	1 cut(s)	36
CseI	GACGC	2 cut(s)	250, 1911
CsiI	ACCWGGT	1 cut(s)	1687
Csp6I	GTAC	8 cut(s)	246, 335, 401, 992, 1161, 1296, 1538, 1965
CspCI	CAANNNNNGTGG	2 cut(s)	1515, 1550
CviQI	GTAC	8 cut(s)	246, 335, 401, 992, 1161, 1296, 1538, 1965
DdeI	CTNAG	5 cut(s)	59, 608, 1380, 1395, 1818
DpnI	GATC	6 cut(s)	623, 890, 1077, 1332, 1602, 1784
DpnII	GATC	6 cut(s)	621, 888, 1075, 1330, 1600, 1782
DraI	TTTAAA	1 cut(s)	1722
DrdI	GACNNNNNNGTC	1 cut(s)	1267
DseDI	GACNNNNNNGTC	1 cut(s)	1267
EaeI	YGGCCR	3 cut(s)	123, 616, 1165
EciI	GGCGGA	1 cut(s)	23
Eco130I	CCWWGG	4 cut(s)	1466, 1515, 1615, 1926
Eco31I	GGTCTC	1 cut(s)	5
Eco32I	GATATC	3 cut(s)	424, 471, 1588
Eco47I	GGWCC	2 cut(s)	305, 1463
Eco88I	CYCGRG	2 cut(s)	1638, 1960
EcoNI	CCTNNNNNAGG	1 cut(s)	1236
EcoRI	GAATTC	1 cut(s)	1091
EcoRII	CCWGG	6 cut(s)	208, 274, 862, 946, 1141, 1687
EcoRV	GATATC	3 cut(s)	424, 471, 1588
EcoT14I	CCWWGG	4 cut(s)	1466, 1515, 1615, 1926
ErhI	CCWWGG	4 cut(s)	1466, 1515, 1615, 1926
FaqI	GGGAC	4 cut(s)	292, 641, 1273, 1889
FauI	CCCGC	2 cut(s)	1261, 1443
FauNDI	CATATG	1 cut(s)	289
FbaI	TGATCA	1 cut(s)	1782
FblI	GTMKAC	1 cut(s)	505
FspBI	CTAG	2 cut(s)	300, 699
FspI	TGCGCA	1 cut(s)	1914
GlaI	GCGC	2 cut(s)	139, 1914
GsaI	CCCAGC	2 cut(s)	1260, 1449
GsuI	CTGGAG	4 cut(s)	231, 795, 1043, 1635
HaeIII	GGCC	5 cut(s)	125, 208, 618, 1167, 1958
HapII	CCGG	6 cut(s)	141, 243, 902, 1328, 1440, 1796
HgaI	GACGC	2 cut(s)	250, 1911
HhaI	GCGC	2 cut(s)	140, 1915
Hin1I	GRCGYC	1 cut(s)	261
Hin6I	GCGC	2 cut(s)	138, 1913
HinP1I	GCGC	2 cut(s)	138, 1913
HincII	GTYRAC	1 cut(s)	1776
HindII	GTYRAC	1 cut(s)	1776
HinfI	GANTC	8 cut(s)	255, 377, 610, 629, 717, 1382, 1801, 1976
HpaII	CCGG	6 cut(s)	141, 243, 902, 1328, 1440, 1796
HphI	GGTGA	7 cut(s)	242, 262, 544, 760, 1603, 1738, 1886
Hpy166II	GTNNAC	2 cut(s)	506, 1776
Hpy188I	TCNGA	6 cut(s)	60, 113, 609, 898, 1288, 1498
Hpy188III	TCNNGA	8 cut(s)	47, 474, 774, 1088, 1388, 1591, 1652, 1705
Hpy8I	GTNNAC	2 cut(s)	506, 1776
HpyAV	CCTTC	4 cut(s)	516, 529, 707, 1064
HpyCH4III	ACNGT	7 cut(s)	91, 268, 283, 517, 638, 816, 1432
HpyCH4IV	ACGT	2 cut(s)	444, 1200
HpyF10VI	GCNNNNNNNGC	5 cut(s)	41, 194, 1019, 1442, 1919
HpyF3I	CTNAG	5 cut(s)	59, 608, 1380, 1395, 1818
HpySE526I	ACGT	2 cut(s)	444, 1200
Hsp92I	GRCGYC	1 cut(s)	261
HspAI	GCGC	2 cut(s)	138, 1913
KpnI	GGTACC	3 cut(s)	249, 995, 1541
KroI	GCCGGC	1 cut(s)	140
KroNI	GCCGGC	1 cut(s)	142
Ksp22I	TGATCA	1 cut(s)	1782
KspI	CCGCGG	1 cut(s)	36
Kzo9I	GATC	6 cut(s)	621, 888, 1075, 1330, 1600, 1782
LmnI	GCTCC	1 cut(s)	1511
Lsp1109I	GCAGC	8 cut(s)	63, 478, 665, 930, 1288, 1741, 1769, 1906
LweI	GCATC	7 cut(s)	94, 176, 316, 676, 1381, 1445, 1698
MabI	ACCWGGT	1 cut(s)	1687
MaeI	CTAG	2 cut(s)	300, 699
MaeII	ACGT	2 cut(s)	444, 1200
MaeIII	GTNAC	8 cut(s)	85, 262, 268, 292, 440, 1483, 1645, 1726
MalI	GATC	6 cut(s)	623, 890, 1077, 1332, 1602, 1784
MboI	GATC	6 cut(s)	621, 888, 1075, 1330, 1600, 1782
MboII	GAAGA	4 cut(s)	722, 755, 1685, 1688
MflI	RGATCY	3 cut(s)	1075, 1330, 1600
MhlI	GDGCHC	1 cut(s)	96
MlsI	TGGCCA	1 cut(s)	1167
MluCI	AATT	7 cut(s)	483, 498, 753, 892, 1091, 1367, 1557
MluNI	TGGCCA	1 cut(s)	1167
MlyI	GAGTC	5 cut(s)	619, 623, 711, 1391, 1970
MmeI	TCCRAC	3 cut(s)	499, 657, 1203
Mox20I	TGGCCA	1 cut(s)	1167
MreI	CGCCGGCG	1 cut(s)	140
MroNI	GCCGGC	1 cut(s)	140
MroXI	GAANNNNTTC	1 cut(s)	54
MscI	TGGCCA	1 cut(s)	1167
MseI	TTAA	6 cut(s)	1190, 1308, 1560, 1721, 1859, 2002
MslI	CAYNNNNRTG	3 cut(s)	372, 672, 1790
Msp20I	TGGCCA	1 cut(s)	1167
MspA1I	CMGCKG	3 cut(s)	35, 73, 1256
MspI	CCGG	6 cut(s)	141, 243, 902, 1328, 1440, 1796
MspR9I	CCNGG	9 cut(s)	210, 276, 864, 948, 1143, 1328, 1441, 1689, 1797
Mva1269I	GAATGC	1 cut(s)	367
MvaI	CCWGG	6 cut(s)	210, 276, 864, 948, 1143, 1689
MvnI	CGCG	5 cut(s)	35, 138, 615, 884, 1389
MwoI	GCNNNNNNNGC	5 cut(s)	41, 194, 1019, 1442, 1919
NaeI	GCCGGC	1 cut(s)	142
NciI	CCSGG	3 cut(s)	1328, 1441, 1797
NcoI	CCATGG	1 cut(s)	1926
NdeI	CATATG	1 cut(s)	289
NdeII	GATC	6 cut(s)	621, 888, 1075, 1330, 1600, 1782
NgoMIV	GCCGGC	1 cut(s)	140
NlaIV	GGNNCC	6 cut(s)	93, 247, 993, 1332, 1513, 1539
NmeAIII	GCCGAG	1 cut(s)	151
NmuCI	GTSAC	5 cut(s)	85, 262, 268, 440, 1726
NruI	TCGCGA	1 cut(s)	1389
NsbI	TGCGCA	1 cut(s)	1914
NspI	RCATGY	3 cut(s)	365, 1795, 1904
PagI	TCATGA	1 cut(s)	1704
PasI	CCCWGGG	1 cut(s)	275
PciI	ACATGT	1 cut(s)	1900
PctI	GAATGC	1 cut(s)	367
PdiI	GCCGGC	1 cut(s)	142
PdmI	GAANNNNTTC	1 cut(s)	54
PfeI	GAWTC	3 cut(s)	255, 377, 1801
PflFI	GACNNNGTC	1 cut(s)	803
PleI	GAGTC	5 cut(s)	618, 623, 711, 1390, 1970
PpsI	GAGTC	5 cut(s)	618, 623, 711, 1390, 1970
PscI	ACATGT	1 cut(s)	1900
PshBI	ATTAAT	1 cut(s)	1308
PsiI	TTATAA	1 cut(s)	1950
Psp6I	CCWGG	6 cut(s)	208, 274, 862, 946, 1141, 1687
PspFI	CCCAGC	2 cut(s)	1256, 1445
PspGI	CCWGG	6 cut(s)	208, 274, 862, 946, 1141, 1687
PspN4I	GGNNCC	6 cut(s)	93, 247, 993, 1332, 1513, 1539
PspPI	GGNCC	3 cut(s)	206, 305, 1463
PstI	CTGCAG	3 cut(s)	496, 1575, 1759
PstNI	CAGNNNCTG	2 cut(s)	76, 1478
PsuI	RGATCY	3 cut(s)	1075, 1330, 1600
PsyI	GACNNNGTC	1 cut(s)	803
RruI	TCGCGA	1 cut(s)	1389
RsaI	GTAC	8 cut(s)	247, 336, 402, 993, 1162, 1297, 1539, 1966
RsaNI	GTAC	8 cut(s)	246, 335, 401, 992, 1161, 1296, 1538, 1965
RseI	CAYNNNNRTG	3 cut(s)	372, 672, 1790
SacII	CCGCGG	1 cut(s)	36
SaqAI	TTAA	6 cut(s)	1190, 1308, 1560, 1721, 1859, 2002
Sau3AI	GATC	6 cut(s)	621, 888, 1075, 1330, 1600, 1782
Sau96I	GGNCC	3 cut(s)	206, 305, 1463
ScaI	AGTACT	2 cut(s)	1162, 1297
SchI	GAGTC	5 cut(s)	619, 623, 711, 1391, 1970
ScrFI	CCNGG	9 cut(s)	210, 276, 864, 948, 1143, 1328, 1441, 1689, 1797
SduI	GDGCHC	1 cut(s)	96
SexAI	ACCWGGT	1 cut(s)	1687
SfaNI	GCATC	7 cut(s)	94, 176, 316, 676, 1381, 1445, 1698
SfcI	CTRYAG	5 cut(s)	222, 492, 662, 1571, 1755
Sfr303I	CCGCGG	1 cut(s)	36
SgrAI	CRCCGGYG	1 cut(s)	140
SgrBI	CCGCGG	1 cut(s)	36
SinI	GGWCC	2 cut(s)	305, 1463
SmiMI	CAYNNNNRTG	3 cut(s)	372, 672, 1790
SmlI	CTYRAG	1 cut(s)	1847
SmoI	CTYRAG	1 cut(s)	1847
Sse9I	AATT	7 cut(s)	483, 498, 753, 892, 1091, 1367, 1557
SspMI	CTAG	2 cut(s)	300, 699
StyD4I	CCNGG	9 cut(s)	208, 274, 862, 946, 1141, 1326, 1439, 1687, 1795
StyI	CCWWGG	4 cut(s)	1466, 1515, 1615, 1926
TaaI	ACNGT	7 cut(s)	91, 268, 283, 517, 638, 816, 1432
TaiI	ACGT	2 cut(s)	447, 1203
TaqI	TCGA	3 cut(s)	720, 1590, 1897
TaqII	GACCGA	1 cut(s)	322
TasI	AATT	7 cut(s)	483, 498, 753, 892, 1091, 1367, 1557
TatI	WGTACW	3 cut(s)	334, 1160, 1295
TauI	GCSGC	2 cut(s)	76, 618
TfiI	GAWTC	3 cut(s)	255, 377, 1801
Tru1I	TTAA	6 cut(s)	1190, 1308, 1560, 1721, 1859, 2002
Tru9I	TTAA	6 cut(s)	1190, 1308, 1560, 1721, 1859, 2002
TscAI	CASTG	8 cut(s)	195, 271, 355, 438, 819, 840, 1249, 1630
TseFI	GTSAC	5 cut(s)	85, 262, 268, 440, 1726
TseI	GCWGC	8 cut(s)	76, 491, 653, 943, 1301, 1754, 1757, 1919
Tsp45I	GTSAC	5 cut(s)	85, 262, 268, 440, 1726
TspDTI	ATGAA	5 cut(s)	390, 594, 723, 872, 1211
TspGWI	ACGGA	4 cut(s)	416, 992, 1073, 1363
TspRI	CASTG	8 cut(s)	195, 271, 355, 438, 819, 840, 1249, 1630
Tth111I	GACNNNGTC	1 cut(s)	803
VpaK11BI	GGWCC	2 cut(s)	305, 1463
VspI	ATTAAT	1 cut(s)	1308
XagI	CCTNNNNNAGG	1 cut(s)	1236
XapI	RAATTY	1 cut(s)	1091
XceI	RCATGY	3 cut(s)	365, 1795, 1904
XmiI	GTMKAC	1 cut(s)	505
XmnI	GAANNNNTTC	1 cut(s)	54
XspI	CTAG	2 cut(s)	300, 699
ZrmI	AGTACT	2 cut(s)	1162, 1297

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.