Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0004056

Physical Location & Seq

Genomic Coordinates Forward (+)

47571885 .. 47578838

Gene Structure 6954 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG320700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1695 bp

ATGGCGGAGACCAAACCCGCAATGCTCTCCGCGGAGGAGGCTCTGGAAATAGTTCTGAGAGTTATCCAGCGGCTGCCACCTGTCACGGTGCCCTTCCACGATGCCCTCAGGAAGGTCTTGGCCGAGGACATTCGCGCCGGCGACCCTTTGCCTCCTTTCCCTGCATCCATCAAGGATGGATATGTAGTGGTAGCTTCAGACGGGCCTGGAGAGTATCTTGAAGTTGGTGAGGCAAGAGCCGGTAGCGATGGAATCGACGTCACTGTTACCCCTGGGACTGTGGCATATGTTACTACTGGAGGGATCACTACTCTTCTTCCTGAAGGTGCTTTCACACTTTACATCATGCGAGTGAGAATACTGGTACAGACGAGCAAAGGAGTTGATATCCGTCCGGTGGGATGTGACATTGAGAAAGATGATGTAGTATTGATATCTGGACAAAGAATTGGTGCTGCAGAAATTGGTATACTTGCTACTGTTGGAAGGACAATGGTGAAGGTTTATCCCACTCCAAAAATCGGTGTGCTTTCCACGGGAGATGAACTTGTAGAGCCAACGACCTCCCCCCCCCCGGGCGGCTGTCTCACTCTTTCAACTCTCCCATGTAAAAGTCTTTCAACATCCTATTTTGTGCAGATCCGGGACTGCAACCGTGCTATGATAATGGCAGCTTCACTACAGCATCATTGCGAAGTTAGTGATTTCGGCATAACTAGAGATGATGAAGAAGGACTCGAAAAGATCATAGATACTGTCATTTCTGCTGGAATTGATATTCTTCTCACCTCTGGAGGTGTTTCTATGGGAGATAAGGACTTTGTCAAACCACTGTTGCATAAGGGAGGGACAGTGCATTTCAGTAAGGTGTGGATGAAACCAGGGAAACCCTTGACTTTTGCGGAGATCAATTCTGAACCAGCAGATAAAATGAGAATGAGAAAACTTTTTGTGTTTGGGCTGCCTGGAAATCCAGTTAGCTGTCTTGTCTGCTTCCATCTATTTGTGGTACCAACCATTCGCTTTCTTGCTGGATGGGCAGACCCTTTGCCTTTCAGATGGGAGTTAAATAAGGGATTGGGTAATCCTGGCTTTGTTGCAGAGAGTACTGGCCACCAGAGAAGCAGTAAGATTTTAAGTATGAAGTCTGCTAATGCGTTGTTGGAGTTGCCTGCAACAGGCAGTGTAATGCCTGCTGGGACTTCTGTGTCAGCCATTATTATTTCCGATATAAGTACTGCTGCTATTAATAAAACTTCCTCATCCCCGGCTATTGTTACCGTGAGTGATACTGTTGCATCCGGGGCTAGGCCGGATAGGAGTGGTCCAAGGGCAGTTTCTGTTATAACTTCTTGTTCAGAAAGGTTGGGAGGAGCCAAGGTTGTTTCAACGGCTGTGGTACCAGATGATGTAAGCAAAATTAAGGATGTTCTGCAGAGATGGAGTGATATCGAGAATATGGATCTCATCCTCACCCTTGGTGGCACTGGATTTACCCCACGAGATGTAACTCCAGAAGCAACCAAAGAGTTGATTGAGAAAGAAACACCTGGTCTTCTTATTGTCATGATGCAAGAGAGTTTAAAGGTGCCTTTAGCTCAAAGACTATTGATTTACTATAACCCTGACAAATGGCGTTTCTACATGATCTCTGATTGCTGCAGCCTTTTCAATACATTCCTACAATCTTCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006163 GO:0006464 GO:0006725 GO:0006732 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008940 GO:0009058 GO:0009116 GO:0009117 GO:0009119 GO:0009141 GO:0009144 GO:0009150 GO:0009199 GO:0009205 GO:0009259 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0016491 GO:0016661 GO:0016740 GO:0016772 GO:0016779 GO:0018130 GO:0018315 GO:0019538 GO:0019637 GO:0019693 GO:0023052 GO:0030151 GO:0032324 GO:0032870 GO:0034641 GO:0036211 GO:0042040 GO:0042221 GO:0042278 GO:0043167 GO:0043169 GO:0043170 GO:0043412 GO:0043545 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046039 GO:0046128 GO:0046483 GO:0046872 GO:0046914 GO:0050789 GO:0050794 GO:0050896 GO:0051186 GO:0051188 GO:0051189 GO:0051716 GO:0055086 GO:0055114 GO:0061598 GO:0061599 GO:0065007 GO:0070566 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071704 GO:0072521 GO:0090407 GO:1901068 GO:1901135 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657

KEGG Pathways

Metabolic & Signaling

ko00790 ko01100 ko04727 map00790 map01100 map04727

Pfam Domains

Protein Families

MoCF_biosynth MoeA_C MoeA_N

Protein Analysis

564

Amino Acids

60.44

Weight (kDa)

5.57

Isoelectric Point (pI)

36.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MoeA_N	PF03453	9 - 162	6e-25	MoeA N-terminal region (domain I and II)
MoCF_biosynth	PF00994	175 - 341	2.3e-24	Probable molybdopterin binding domain
MoeA_C	PF03454	362 - 406	5.7e-06	MoeA C-terminal region (domain IV)
MoCF_biosynth	PF00994	424 - 528	3.3e-20	Probable molybdopterin binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004056)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G20990 AT5G20990 AT5G20990
fragaria_vesca	FvH4_3g26260 FvH4_3g26260 FvH4_3g26260 FvH4_3g26260 FvH4_3g26260
malus_domestica	MD11G1181200.v1.1
prunus_persica	Prupe.6G153900_v2.0.a1 Prupe.6G153900_v2.0.a1
pyrus_communis	pycom03g11700 pycom11g15630
rosa_chinensis	RchiOBHm_Chr5g0048741
rosa_laevigata	RLG00000034556
rosa_multiflora	Rmu_co8087680.1_g000001 Rmu_sc0003675.1_g000001 Rmu_sc0006432.1_g000010 Rmu_sc0006432.1_g000011 Rmu_sc0011208.1_g000008 Rmu_sc0027077.1_g000001
rosa_roxburghii	Rroxscaffold_1G00033080
rosa_rugosa	Rorug05G0240900 Rorug05G0257800 Rorug05G0257900 Rorug05G0258000
rosa_samantha	Rh5AG320700 Rh5BG330500 Rh5CG356400 Rh5CG367600 Rh5DG341700
rosa_wichuraiana	Rw5G030150 Rw5G031200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1346
AasI	GACNNNNNNGTC	1 cut(s)	1207
AatII	GACGTC	1 cut(s)	261
Acc65I	GGTACC	2 cut(s)	1009, 1399
AccB1I	GGYRCC	4 cut(s)	88, 1009, 1399, 1588
AccI	GTMKAC	1 cut(s)	469
AccII	CGCG	2 cut(s)	32, 135
AciI	CCGC	7 cut(s)	5, 18, 30, 32, 70, 579, 902
AclWI	GGATC	3 cut(s)	311, 634, 1470
AcoI	YGGCCR	2 cut(s)	120, 1111
AcuI	CTGAAG	2 cut(s)	180, 342
AcyI	GRCGYC	1 cut(s)	258
AfaI	GTAC	5 cut(s)	366, 1011, 1108, 1237, 1401
AfiI	CCNNNNNNNGG	8 cut(s)	112, 397, 521, 574, 575, 578, 1178, 1308
AgsI	TTSAA	5 cut(s)	221, 597, 621, 1389, 1672
AjnI	CCWGG	6 cut(s)	205, 271, 880, 964, 1087, 1549
AjuI	GAANNNNNNNTTGG	2 cut(s)	1321, 1353
AluBI	AGCT	4 cut(s)	194, 674, 981, 1598
AluI	AGCT	4 cut(s)	194, 674, 981, 1598
Alw26I	GTCTC	2 cut(s)	2, 590
AlwI	GGATC	3 cut(s)	311, 634, 1470
AlwNI	CAGNNNCTG	2 cut(s)	73, 1340
Ama87I	CYCGRG	1 cut(s)	574
AoxI	GGCC	4 cut(s)	120, 203, 1111, 1310
ApeKI	GCWGC	7 cut(s)	73, 455, 671, 961, 1241, 1659, 1662
AseI	ATTAAT	1 cut(s)	1248
Asp700I	GAANNNNTTC	1 cut(s)	51
Asp718I	GGTACC	2 cut(s)	1009, 1399
AspLEI	GCGC	1 cut(s)	137
AspS9I	GGNCC	2 cut(s)	203, 1325
AsuC2I	CCSGG	5 cut(s)	575, 576, 644, 1268, 1303
AsuHPI	GGTGA	4 cut(s)	239, 508, 778, 1465
AvaI	CYCGRG	1 cut(s)	574
AvaII	GGWCC	1 cut(s)	1325
AxyI	CCTNAGG	1 cut(s)	107
BaeGI	GKGCMC	1 cut(s)	93
BalI	TGGCCA	1 cut(s)	1113
BanI	GGYRCC	4 cut(s)	88, 1009, 1399, 1588
BauI	CACGAG	1 cut(s)	1500
BbsI	GAAGAC	1 cut(s)	1547
BbvI	GCAGC	7 cut(s)	60, 442, 683, 948, 1228, 1646, 1674
BccI	CCATC	7 cut(s)	170, 176, 242, 1005, 1029, 1053, 1434
BceAI	ACGGC	1 cut(s)	1407
BciT130I	CCWGG	6 cut(s)	207, 273, 882, 966, 1089, 1551
BcnI	CCSGG	5 cut(s)	575, 576, 644, 1268, 1303
BcoDI	GTCTC	2 cut(s)	2, 590
BfaI	CTAG	2 cut(s)	717, 1308
BfmI	CTRYAG	4 cut(s)	456, 680, 1433, 1660
BisI	GCNGC	9 cut(s)	71, 74, 456, 580, 672, 962, 1242, 1660, 1663
BlsI	GCNGC	9 cut(s)	72, 75, 457, 581, 673, 963, 1243, 1661, 1664
BmcAI	AGTACT	2 cut(s)	1108, 1237
Bme18I	GGWCC	1 cut(s)	1325
BmeT110I	CYCGRG	1 cut(s)	574
BmgT120I	GGNCC	2 cut(s)	203, 1325
BmiI	GGNNCC	5 cut(s)	90, 1011, 1375, 1401, 1590
BmsI	GCATC	5 cut(s)	91, 173, 694, 1307, 1560
BpiI	GAAGAC	1 cut(s)	1547
BpmI	CTGGAG	4 cut(s)	228, 318, 813, 1497
BpuMI	CCSGG	5 cut(s)	575, 576, 644, 1268, 1303
BsaHI	GRCGYC	1 cut(s)	258
BsaI	GGTCTC	1 cut(s)	2
BsaWI	WCCGGW	1 cut(s)	394
BsaXI	ACNNNNNCTCC	4 cut(s)	837, 867, 1365, 1395
Bsc4I	CCNNNNNNNGG	8 cut(s)	112, 397, 521, 574, 575, 578, 1178, 1308
Bse118I	RCCGGY	2 cut(s)	137, 239
Bse1I	ACTGG	5 cut(s)	301, 366, 974, 1114, 1492
Bse21I	CCTNAGG	1 cut(s)	107
Bse3DI	GCAATG	2 cut(s)	27, 688
BseBI	CCWGG	6 cut(s)	207, 273, 882, 966, 1089, 1551
BseLI	CCNNNNNNNGG	8 cut(s)	112, 397, 521, 574, 575, 578, 1178, 1308
BseMI	GCAATG	2 cut(s)	27, 688
BseMII	CTCAG	2 cut(s)	47, 121
BseNI	ACTGG	5 cut(s)	301, 366, 974, 1114, 1492
BseRI	GAGGAG	2 cut(s)	50, 1386
BseSI	GKGCMC	1 cut(s)	93
BseXI	GCAGC	7 cut(s)	60, 442, 683, 948, 1228, 1646, 1674
BseYI	CCCAGC	1 cut(s)	1196
BsgI	GTGCAG	1 cut(s)	656
Bsh1236I	CGCG	2 cut(s)	32, 135
BshFI	GGCC	4 cut(s)	122, 205, 1113, 1312
BshNI	GGYRCC	4 cut(s)	88, 1009, 1399, 1588
BsiHKCI	CYCGRG	1 cut(s)	574
BsiSI	CCGG	8 cut(s)	138, 240, 395, 575, 643, 1268, 1302, 1313
BslFI	GGGAC	4 cut(s)	289, 659, 862, 1213
BslI	CCNNNNNNNGG	8 cut(s)	112, 397, 521, 574, 575, 578, 1178, 1308
BsmAI	GTCTC	2 cut(s)	2, 590
BsmFI	GGGAC	4 cut(s)	289, 659, 862, 1213
BsnI	GGCC	4 cut(s)	122, 205, 1113, 1312
Bso31I	GGTCTC	1 cut(s)	2
BsoBI	CYCGRG	1 cut(s)	574
Bsp1286I	GDGCHC	1 cut(s)	93
Bsp143I	GATC	6 cut(s)	303, 639, 744, 906, 1462, 1647
BspACI	CCGC	7 cut(s)	5, 18, 30, 32, 70, 579, 902
BspANI	GGCC	4 cut(s)	122, 205, 1113, 1312
BspCNI	CTCAG	2 cut(s)	48, 120
BspFNI	CGCG	2 cut(s)	32, 135
BspHI	TCATGA	1 cut(s)	1566
BspLI	GGNNCC	5 cut(s)	90, 1011, 1375, 1401, 1590
BspMAI	CTGCAG	3 cut(s)	460, 1437, 1664
BspPI	GGATC	3 cut(s)	311, 634, 1470
BspT107I	GGYRCC	4 cut(s)	88, 1009, 1399, 1588
BspTNI	GGTCTC	1 cut(s)	2
BsrDI	GCAATG	2 cut(s)	27, 688
BsrFI	RCCGGY	2 cut(s)	137, 239
BsrI	ACTGG	5 cut(s)	301, 366, 974, 1114, 1492
BssAI	RCCGGY	2 cut(s)	137, 239
BssMI	GATC	6 cut(s)	303, 639, 744, 906, 1462, 1647
BssNAI	GTATAC	1 cut(s)	470
BssNI	GRCGYC	1 cut(s)	258
BssSI	CACGAG	1 cut(s)	1500
BssT1I	CCWWGG	3 cut(s)	1328, 1377, 1477
Bst1107I	GTATAC	1 cut(s)	470
Bst2BI	CACGAG	1 cut(s)	1500
Bst2UI	CCWGG	6 cut(s)	207, 273, 882, 966, 1089, 1551
Bst6I	CTCTTC	1 cut(s)	318
BstACI	GRCGYC	1 cut(s)	258
BstC8I	GCNNGC	3 cut(s)	139, 1173, 1194
BstDEI	CTNAG	3 cut(s)	56, 107, 1692
BstDSI	CCRYGG	2 cut(s)	30, 534
BstENI	CCTNNNNNAGG	2 cut(s)	110, 1176
BstFNI	CGCG	2 cut(s)	32, 135
BstHHI	GCGC	1 cut(s)	137
BstKTI	GATC	6 cut(s)	306, 642, 747, 909, 1465, 1650
BstMAI	GTCTC	2 cut(s)	2, 590
BstMBI	GATC	6 cut(s)	303, 639, 744, 906, 1462, 1647
BstMWI	GCNNNNNNNGC	3 cut(s)	38, 1037, 1304
BstNI	CCWGG	6 cut(s)	207, 273, 882, 966, 1089, 1551
BstSFI	CTRYAG	4 cut(s)	456, 680, 1433, 1660
BstSLI	GKGCMC	1 cut(s)	93
BstUI	CGCG	2 cut(s)	32, 135
BstV1I	GCAGC	7 cut(s)	60, 442, 683, 948, 1228, 1646, 1674
BstV2I	GAAGAC	1 cut(s)	1547
BstX2I	RGATCY	2 cut(s)	639, 1462
BstYI	RGATCY	2 cut(s)	639, 1462
BstZ17I	GTATAC	1 cut(s)	470
Bsu36I	CCTNAGG	1 cut(s)	107
BsuRI	GGCC	4 cut(s)	122, 205, 1113, 1312
BtgI	CCRYGG	2 cut(s)	30, 534
BtgZI	GCGATG	1 cut(s)	261
BtsI	GCAGTG	1 cut(s)	1189
BtsIMutI	CAGTG	5 cut(s)	261, 830, 858, 1189, 1485
Cac8I	GCNNGC	3 cut(s)	139, 1173, 1194
CaiI	CAGNNNCTG	2 cut(s)	73, 1340
CciI	TCATGA	1 cut(s)	1566
CfoI	GCGC	1 cut(s)	137
Cfr10I	RCCGGY	2 cut(s)	137, 239
Cfr13I	GGNCC	2 cut(s)	203, 1325
Cfr42I	CCGCGG	1 cut(s)	33
Cfr9I	CCCGGG	1 cut(s)	574
CsiI	ACCWGGT	1 cut(s)	1549
Csp6I	GTAC	5 cut(s)	365, 1010, 1107, 1236, 1400
CspCI	CAANNNNNGTGG	2 cut(s)	1377, 1412
CviAII	CATG	4 cut(s)	346, 606, 1567, 1645
CviQI	GTAC	5 cut(s)	365, 1010, 1107, 1236, 1400
DdeI	CTNAG	3 cut(s)	56, 107, 1692
DpnI	GATC	6 cut(s)	305, 641, 746, 908, 1464, 1649
DpnII	GATC	6 cut(s)	303, 639, 744, 906, 1462, 1647
DraI	TTTAAA	1 cut(s)	1584
DrdI	GACNNNNNNGTC	1 cut(s)	1207
DseDI	GACNNNNNNGTC	1 cut(s)	1207
EaeI	YGGCCR	2 cut(s)	120, 1111
Eam1104I	CTCTTC	1 cut(s)	318
EarI	CTCTTC	1 cut(s)	318
EciI	GGCGGA	1 cut(s)	20
Eco130I	CCWWGG	3 cut(s)	1328, 1377, 1477
Eco31I	GGTCTC	1 cut(s)	2
Eco32I	GATATC	3 cut(s)	388, 435, 1450
Eco47I	GGWCC	1 cut(s)	1325
Eco57I	CTGAAG	2 cut(s)	180, 342
Eco81I	CCTNAGG	1 cut(s)	107
Eco88I	CYCGRG	1 cut(s)	574
EcoNI	CCTNNNNNAGG	2 cut(s)	110, 1176
EcoRII	CCWGG	6 cut(s)	205, 271, 880, 964, 1087, 1549
EcoRV	GATATC	3 cut(s)	388, 435, 1450
EcoT14I	CCWWGG	3 cut(s)	1328, 1377, 1477
ErhI	CCWWGG	3 cut(s)	1328, 1377, 1477
FaeI	CATG	4 cut(s)	349, 609, 1570, 1648
FaqI	GGGAC	4 cut(s)	289, 659, 862, 1213
FatI	CATG	4 cut(s)	345, 605, 1566, 1644
FauI	CCCGC	1 cut(s)	25
FauNDI	CATATG	1 cut(s)	286
FblI	GTMKAC	1 cut(s)	469
Fnu4HI	GCNGC	9 cut(s)	71, 74, 456, 580, 672, 962, 1242, 1660, 1663
Fsp4HI	GCNGC	9 cut(s)	71, 74, 456, 580, 672, 962, 1242, 1660, 1663
FspBI	CTAG	2 cut(s)	717, 1308
GlaI	GCGC	1 cut(s)	136
GluI	GCNGC	9 cut(s)	71, 74, 456, 580, 672, 962, 1242, 1660, 1663
GsaI	CCCAGC	1 cut(s)	1200
GsuI	CTGGAG	4 cut(s)	228, 318, 813, 1497
HaeIII	GGCC	4 cut(s)	122, 205, 1113, 1312
HapII	CCGG	8 cut(s)	138, 240, 395, 575, 643, 1268, 1302, 1313
HhaI	GCGC	1 cut(s)	137
Hin1I	GRCGYC	1 cut(s)	258
Hin1II	CATG	4 cut(s)	349, 609, 1570, 1648
Hin6I	GCGC	1 cut(s)	135
HinP1I	GCGC	1 cut(s)	135
HinfI	GANTC	2 cut(s)	252, 735
HpaII	CCGG	8 cut(s)	138, 240, 395, 575, 643, 1268, 1302, 1313
HphI	GGTGA	4 cut(s)	239, 508, 778, 1465
Hpy166II	GTNNAC	1 cut(s)	470
Hpy188I	TCNGA	7 cut(s)	57, 199, 916, 1058, 1228, 1360, 1654
Hpy188III	TCNNGA	9 cut(s)	44, 109, 218, 320, 438, 792, 1453, 1514, 1567
Hpy8I	GTNNAC	1 cut(s)	470
Hpy99I	CGWCG	1 cut(s)	260
HpyAV	CCTTC	6 cut(s)	103, 106, 317, 480, 493, 725
HpyCH4IV	ACGT	1 cut(s)	258
HpyF10VI	GCNNNNNNNGC	3 cut(s)	38, 1037, 1304
HpyF3I	CTNAG	3 cut(s)	56, 107, 1692
HpySE526I	ACGT	1 cut(s)	258
Hsp92I	GRCGYC	1 cut(s)	258
Hsp92II	CATG	4 cut(s)	349, 609, 1570, 1648
HspAI	GCGC	1 cut(s)	135
KpnI	GGTACC	2 cut(s)	1013, 1403
KroI	GCCGGC	1 cut(s)	137
KroNI	GCCGGC	1 cut(s)	139
KspI	CCGCGG	1 cut(s)	33
Kzo9I	GATC	6 cut(s)	303, 639, 744, 906, 1462, 1647
LmnI	GCTCC	1 cut(s)	1373
Lsp1109I	GCAGC	7 cut(s)	60, 442, 683, 948, 1228, 1646, 1674
LweI	GCATC	5 cut(s)	91, 173, 694, 1307, 1560
MabI	ACCWGGT	1 cut(s)	1549
MaeI	CTAG	2 cut(s)	717, 1308
MaeII	ACGT	1 cut(s)	258
MaeIII	GTNAC	7 cut(s)	82, 259, 265, 289, 404, 1276, 1507
MalI	GATC	6 cut(s)	305, 641, 746, 908, 1464, 1649
MboI	GATC	6 cut(s)	303, 639, 744, 906, 1462, 1647
MboII	GAAGA	6 cut(s)	305, 308, 740, 773, 1547, 1680
MflI	RGATCY	2 cut(s)	639, 1462
MhlI	GDGCHC	1 cut(s)	93
MlsI	TGGCCA	1 cut(s)	1113
MluCI	AATT	5 cut(s)	447, 462, 771, 910, 1419
MluNI	TGGCCA	1 cut(s)	1113
MlyI	GAGTC	1 cut(s)	729
MmeI	TCCRAC	2 cut(s)	463, 1143
Mox20I	TGGCCA	1 cut(s)	1113
MreI	CGCCGGCG	1 cut(s)	137
MroNI	GCCGGC	1 cut(s)	137
MroXI	GAANNNNTTC	1 cut(s)	51
MscI	TGGCCA	1 cut(s)	1113
MseI	TTAA	5 cut(s)	1067, 1136, 1248, 1422, 1583
MslI	CAYNNNNRTG	1 cut(s)	350
Msp20I	TGGCCA	1 cut(s)	1113
MspA1I	CMGCKG	2 cut(s)	32, 70
MspI	CCGG	8 cut(s)	138, 240, 395, 575, 643, 1268, 1302, 1313
MvaI	CCWGG	6 cut(s)	207, 273, 882, 966, 1089, 1551
MvnI	CGCG	2 cut(s)	32, 135
MwoI	GCNNNNNNNGC	3 cut(s)	38, 1037, 1304
NaeI	GCCGGC	1 cut(s)	139
NciI	CCSGG	5 cut(s)	575, 576, 644, 1268, 1303
NdeI	CATATG	1 cut(s)	286
NdeII	GATC	6 cut(s)	303, 639, 744, 906, 1462, 1647
NgoMIV	GCCGGC	1 cut(s)	137
NlaIII	CATG	4 cut(s)	349, 609, 1570, 1648
NlaIV	GGNNCC	5 cut(s)	90, 1011, 1375, 1401, 1590
NmeAIII	GCCGAG	1 cut(s)	148
NmuCI	GTSAC	3 cut(s)	82, 259, 404
PagI	TCATGA	1 cut(s)	1566
PasI	CCCWGGG	1 cut(s)	272
PdiI	GCCGGC	1 cut(s)	139
PdmI	GAANNNNTTC	1 cut(s)	51
PfeI	GAWTC	1 cut(s)	252
PflFI	GACNNNGTC	1 cut(s)	821
PfoI	TCCNGGA	1 cut(s)	642
PkrI	GCNGC	9 cut(s)	72, 75, 457, 581, 673, 963, 1243, 1661, 1664
PleI	GAGTC	1 cut(s)	729
PpsI	GAGTC	1 cut(s)	729
PshBI	ATTAAT	1 cut(s)	1248
PsiI	TTATAA	1 cut(s)	1346
Psp6I	CCWGG	6 cut(s)	205, 271, 880, 964, 1087, 1549
PspFI	CCCAGC	1 cut(s)	1196
PspGI	CCWGG	6 cut(s)	205, 271, 880, 964, 1087, 1549
PspN4I	GGNNCC	5 cut(s)	90, 1011, 1375, 1401, 1590
PspPI	GGNCC	2 cut(s)	203, 1325
PstI	CTGCAG	3 cut(s)	460, 1437, 1664
PstNI	CAGNNNCTG	2 cut(s)	73, 1340
PsuI	RGATCY	2 cut(s)	639, 1462
PsyI	GACNNNGTC	1 cut(s)	821
RsaI	GTAC	5 cut(s)	366, 1011, 1108, 1237, 1401
RsaNI	GTAC	5 cut(s)	365, 1010, 1107, 1236, 1400
RseI	CAYNNNNRTG	1 cut(s)	350
SacII	CCGCGG	1 cut(s)	33
SaqAI	TTAA	5 cut(s)	1067, 1136, 1248, 1422, 1583
SatI	GCNGC	9 cut(s)	71, 74, 456, 580, 672, 962, 1242, 1660, 1663
Sau3AI	GATC	6 cut(s)	303, 639, 744, 906, 1462, 1647
Sau96I	GGNCC	2 cut(s)	203, 1325
ScaI	AGTACT	2 cut(s)	1108, 1237
SchI	GAGTC	1 cut(s)	729
SduI	GDGCHC	1 cut(s)	93
SexAI	ACCWGGT	1 cut(s)	1549
SfaNI	GCATC	5 cut(s)	91, 173, 694, 1307, 1560
SfcI	CTRYAG	4 cut(s)	456, 680, 1433, 1660
Sfr303I	CCGCGG	1 cut(s)	33
SgrAI	CRCCGGYG	1 cut(s)	137
SgrBI	CCGCGG	1 cut(s)	33
SinI	GGWCC	1 cut(s)	1325
SmaI	CCCGGG	1 cut(s)	576
SmiMI	CAYNNNNRTG	1 cut(s)	350
Sse9I	AATT	5 cut(s)	447, 462, 771, 910, 1419
SsiI	CCGC	7 cut(s)	5, 18, 30, 32, 70, 579, 902
SspMI	CTAG	2 cut(s)	717, 1308
StyI	CCWWGG	3 cut(s)	1328, 1377, 1477
TaiI	ACGT	1 cut(s)	261
TaqI	TCGA	3 cut(s)	255, 738, 1452
TasI	AATT	5 cut(s)	447, 462, 771, 910, 1419
TatI	WGTACW	2 cut(s)	1106, 1235
TauI	GCSGC	2 cut(s)	73, 582
TfiI	GAWTC	1 cut(s)	252
Tru1I	TTAA	5 cut(s)	1067, 1136, 1248, 1422, 1583
Tru9I	TTAA	5 cut(s)	1067, 1136, 1248, 1422, 1583
TscAI	CASTG	5 cut(s)	268, 837, 858, 1189, 1492
TseFI	GTSAC	3 cut(s)	82, 259, 404
TseI	GCWGC	7 cut(s)	73, 455, 671, 961, 1241, 1659, 1662
Tsp45I	GTSAC	3 cut(s)	82, 259, 404
TspDTI	ATGAA	4 cut(s)	558, 741, 890, 1157
TspGWI	ACGGA	1 cut(s)	380
TspMI	CCCGGG	1 cut(s)	574
TspRI	CASTG	5 cut(s)	268, 837, 858, 1189, 1492
Tth111I	GACNNNGTC	1 cut(s)	821
VpaK11BI	GGWCC	1 cut(s)	1325
VspI	ATTAAT	1 cut(s)	1248
XagI	CCTNNNNNAGG	2 cut(s)	110, 1176
XmaI	CCCGGG	1 cut(s)	574
XmiI	GTMKAC	1 cut(s)	469
XmnI	GAANNNNTTC	1 cut(s)	51
XspI	CTAG	2 cut(s)	717, 1308
ZraI	GACGTC	1 cut(s)	259
ZrmI	AGTACT	2 cut(s)	1108, 1237

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.