pycom11g25680

HUA2-like protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Reverse (-)
28426584 .. 28434758
8175 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3786 bp
ATGGCGCCCAGCCGGAGGAAAGGAGCTAGCAAGGCCGCTCAGGCCGCCGCTGCTCGCCGCCAATGGAAGGTCGGCGATCTTGTTCTTGCTAAAGTCAAAGGCTTCCCTGCTTGGCCGGCTACCGTAAGTGAACCGGAGAAGTGGGGCTACTCTGCTGATTGGAAGAAGGTACTAGTCTTCTTCTTTGGAACCCAACAGATAGCGTTCTGCAACCCTGCAGACGTCGAGGCATTTACCGATGAGAAGAAACAGTCTCTTCTGGGCAAGCGTCACGGAGCTGATTTTGTTCGTGCAGTCCAAGAGATTATTGATAGTTATGATAAAATGAAGAAAGAGGACCAAGTTGATGACTTCAAATCCACTGCAAATGGAAGGAACACAGTGGACTCTTTGTCGAACTTGGGTGCAAAGGATCAGTCAGAAGCTCCTGAAGCAATTCTGGATTCACATTCTAAATCTTCACAGTCAACAAATAGAAATGAGCCAAGTGTTTCTGTAGAGGATGCTTCAGCAACTGAACAAGTAGATGCTATGCACGATAAGGAAGCCTTAATCGAGGAACCTGCTGCAACAGCAATGGTTACTGAAGCACCTCTTCCAGTGACCTACTCTTCAAGAAAGAGATCAAGAGACTTGCGATCACGGAGTTGTGTCTCACTGAAAAAGGAAGGACCAGCTCGTAGGTCGAGACGTTCATCCAGGATGGAATCACGTAGAGTACGCAACTCAAGAATGTCATGTGATGATGATGACAAGAATGCTGGGCAAGTATCTGGTAATTTAATTCGGGATAGATGTCTAAGAAGGAATAAACGAATACGGAAATCACCTGATGCCTCTGAGTGTGATGATGTGAATTCAGCTGCTTTTGTTTCAAATGGTTGTATTGAATATAATGGTTCTGAAGTTGTGACAGTTGATTCTGACGCATTTAGTCTAAATGAAGGCAGTGCTATTGATTCTGGTTGTAAAGGTGAACACTCAGAGGCTGTTGCCAAATTCTTGGATGGCGATGCTGAGTTGGTCAAAGGACTTGATCTCCAAATAAAGGCAGTCGTTATCAAGAAGAAAAGGAAGCCAAACAGAAAGCGAATTACTAATGATGCAGCTGACCCTATTGCTATGGTGGACAAGGAAACAGTTTTGGAGGTAAAGCAAAGTAGTAATCAAACTATGCAGAATGATTGTGGGAAGATGAATGGAAATTCCTCCAAGGAAGATGGAGATGAGCACCTGCCATTAGTGAAACGAGCCAGGGTGCGAATGGGCAAACCATGTTCTGCTCACGAGGAAGTAGATAGCTTTGCACACACTGAAGAAAGTCAGAAGGAAGTTGTACTCAATCCACTGGGTCCAGTCAGCACATCATCAAATTGTGAGGAAAATTGTCCTTCTGGTAGGGACTCATCTGTGGTAAATGAAGTTTTGGATAATATTTCACCTTCTGGAGGTTGCACTCGCATTTTGGGAAACAGACCTCAGCTTTGGAACACCAAGAAAGACCAATCATTTGGTTGCTCAGTTGGTGGCGAAGCTGTTTTACCTCCATCTAAGCGTCTTCATCGCGCTCTAGAAGCCATGTCAGCTAATGTTGCTGAAGATGATAGATGTAATTATGAATCTTCAGTCGCCAAGACGTCTACTGTTGGTTGTCATCATTCTTCCACAAGCACATGCCCTGCTATGACTGTAGAAAATAATAAAGGGACTGGATTGGTACTGCAGAGTGAAGACTCTTTGGGCAATAATGCTTCAGGGGTTGATGCTTCTGGATTATCTACCAGTTTAAATCCTGTAGTCTTGGAGGAAAATGCTAAATCGGTTGTGGAAGTGGTTGCTGATGAAAAAACTGAGAGTCTGAACACCCAAAATCATGAATGTTCTATTGATGAATCACCAGATTTTGGAGACCATGTTGCTGGTAAAGATCTTAGTGGTGGTGCTTCTGGTTGTCACATTATGGGAAGTCCAGAGCATTTATCGCCTAATATTGACAGAGGAGAGGCTGGTATTCGGCTTATTGAAAGTTCAATTGATGAGTTGCCTACGAAGGACAAAAGCAAAGACAAAGATGAATTGAGCCACTGTGAAGCAGAAAATCCTGATATTGAATGTGATACTTCGGAGCATACTTTGAAGAGCATAAATCCTCTTGTATCGGGCACTATCCATGATATTTCTGAAGTTTCACCTTTAAACGAGGCTAGTCCACTTCATTATGGTGGAGAGGGCTGCAGTGAGAAAGTTGAGGCTTTGGAACCCCGTGTTCAAGATACTAGAGAAATCAATGACATGTTTGATTTGGTGGTGAAAGAGGTTGAAAATAAAAAAACAGAGAATGATCCAAGTTCAATTTCCTATCCAAATGAATACTTGGGTGAAAAAAATGCCTCTGGTATCCGGTCAAGTCCATCCCTAACAGATGGAGGAGATTCTCTAGCACATGCATCACCTCCCAATACCTCAAGCTGTCACATGTCGACTTCAGATGGTAGTAATATTCTTCAGAACAATGGCAGTTGTAGTCCAGATGGTGATTTGCAGAACAAGAGAACTTCATCTACTATACTTGGTGAGGACGGAAAGTCTGAATCAGTTGTTAGTCAAAGACCAAAATCTGTGGGCAGGTATGCAGAAGTACATGCAACCCTCTTATCATTTGAGACAATGCTTGGAACATTGACAAGGACCAAGGAGAGCATTGGTCGAGCAACTCGTGTTGCTATGGACTGTGGAAAGCTTGGTGTAGCTGCTAAGGTCTTGGAAATTCTTGCCCATTATTTGGAAACTGAGTCAAGCTTACACCGAAGGGTGGACTTATTCTTCCTGGTGGATTCAATTGCTCAATGCACCCGAGGGTTGAAGGGTGATGGCTGTGGTATGTACCCTTCTGCAATCCAAGCAATCCTGCCACGGTTATTGTCAGCTGCTGCTCCTCCTGGAAGTTCTGCACTTGAAAATCGTAGACAGTGTTTAAAGGTTTTGAAACTTTGGTCAGAGAGAAGGATTGTTCCAGAGTCCATAATTCATCGCCATATGCGAGAACTAGATACTCATGGTGTGTCTTCTTCTGGTGCATATGGCAGGCGCTCTGCGAGAACGGAAAGGTCTTTGGATGATCCTCTTAGAGAAATGGAGGGTATGCTTGTTGACGAATATGGAAGCAATTCAAGTTTTCAACTTCCTGGATTTTGTATGCCCCGTATGCTCAAGGATGAAGATGATGGATGTGATTCTGATGGGGAAAGTTTCGAGGCTGTCACTCCTGAGCACAATCCTCAGGCCCATGAAGAACAAGAAACCACACCTGCCACTGAAAGACATAGGCATATCTTGGAAGATGTGGATGGAGAGCTTGAAATGGAGGATGTGGCACCTTCTTGTGATGTTGACATGAGTTCATCTTGTGGTGTTGCTGGAGCCAATGGTGTGCAGGCTTCGCATAATCAGTTTGAACAGAATTATCAACCGTCCCTTGCCCCTCCATTACCTCGAGATGTGCCACCGTCATCTCCTCCACTACCATCTTCTCCTCCGCCTCCACCGCCTCCGCCGCCTCCACCACCACTGTCTCCACCTCATGTGATCCATCCTCCATGCGCTATGCCTGATGCCTATATGAGTGGTGTTGATTCAAAGTCCTACACTGTCACACATAATGTGCATGACAACAGAGTTCAACCTCCACCTCAGCAGTTGAATGCACCAAGAGTCAACCAAACAATTCCCGATGCCATGCATTATTGTGCCTCTGAATGCAGAGATCGATCAGAGACAGATGCCTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1262

Amino Acids

136.66

Weight (kDa)

5.22

Isoelectric Point (pI)

64.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PWWP PF00855 25 - 106 1.4e-16 PWWP domain
CID PF04818 887 - 1010 6.1e-12 CID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1242, 3316
AatII GACGTC 2 cut(s) 225, 1640
Acc36I ACCTGC 4 cut(s) 571, 1242, 2616, 3316
AccB1I GGYRCC 2 cut(s) 4, 3373
AccB7I CCANNNNNTGG 2 cut(s) 1904, 2782
AccBSI CCGCTC 1 cut(s) 38
AccI GTMKAC 3 cut(s) 1640, 2480, 2965
AccII CGCG 1 cut(s) 1566
AciI CCGC 8 cut(s) 36, 45, 48, 58, 3536, 3545, 3551, 3554
AclWI GGATC 4 cut(s) 420, 2336, 3113, 3580
AcoI YGGCCR 1 cut(s) 113
AcsI RAATTY 4 cut(s) 856, 998, 1204, 2766
AcyI GRCGYC 3 cut(s) 5, 222, 1637
AfaI GTAC 6 cut(s) 171, 720, 1338, 1719, 2640, 2885
AfiI CCNNNNNNNGG 7 cut(s) 15, 67, 1048, 1448, 1904, 2782, 2812
AflIII ACRYGT 2 cut(s) 2292, 2475
AhdI GACNNNNNGTC 2 cut(s) 391, 2584
AhlI ACTAGT 1 cut(s) 172
AjnI CCWGG 5 cut(s) 698, 1253, 2826, 2938, 3184
AjuI GAANNNNNNNTTGG 2 cut(s) 2338, 2370
Alw21I GWGCWC 2 cut(s) 1233, 3273
Alw26I GTCTC 8 cut(s) 258, 624, 658, 682, 1902, 2657, 3576, 3767
AlwI GGATC 4 cut(s) 420, 2336, 3113, 3580
AlwNI CAGNNNCTG 3 cut(s) 515, 989, 2930
Ama87I CYCGRG 2 cut(s) 2853, 3492
AoxI GGCC 4 cut(s) 33, 42, 113, 3282
ApeKI GCWGC 8 cut(s) 50, 566, 863, 1106, 2232, 2750, 2927, 2930
ApoI RAATTY 4 cut(s) 856, 998, 1204, 2766
ArsI GACNNNNNNTTYG 6 cut(s) 401, 433, 1467, 1493, 1499, 1525
Asp700I GAANNNNTTC 2 cut(s) 435, 3166
AspLEI GCGC 4 cut(s) 7, 1568, 3090, 3602
AspS9I GGNCC 5 cut(s) 337, 671, 1352, 2688, 3283
AsuNHI GCTAGC 1 cut(s) 26
AvaI CYCGRG 2 cut(s) 2853, 3492
AvaII GGWCC 4 cut(s) 337, 671, 1352, 2688
AxyI CCTNAGG 1 cut(s) 3279
BaeGI GKGCMC 1 cut(s) 2165
BanI GGYRCC 2 cut(s) 4, 3373
BarI GAAGNNNNNNTAC 6 cut(s) 131, 163, 1524, 1556, 2872, 2904
BauI CACGAG 2 cut(s) 1286, 2715
BbsI GAAGAC 4 cut(s) 169, 1550, 1737, 3057
Bbv12I GWGCWC 2 cut(s) 1233, 3273
BbvCI CCTCAGC 2 cut(s) 1479, 3690
BbvI GCAGC 8 cut(s) 37, 553, 850, 1118, 2219, 2737, 2914, 2917
BcgI CGANNNNNNTGC 2 cut(s) 545, 579
BciT130I CCWGG 5 cut(s) 700, 1255, 2828, 2940, 3186
BciVI GTATCC 1 cut(s) 2408
BcoDI GTCTC 8 cut(s) 258, 624, 658, 682, 1902, 2657, 3576, 3767
BcuI ACTAGT 1 cut(s) 172
BfaI CTAG 7 cut(s) 27, 173, 1571, 2205, 2277, 2438, 3047
BfmI CTRYAG 6 cut(s) 216, 495, 1689, 1721, 1794, 2233
BfoI RGCGCY 2 cut(s) 8, 3091
BfuAI ACCTGC 4 cut(s) 571, 1242, 2616, 3316
BfuI GTATCC 1 cut(s) 2408
BglI GCCNNNNNGGC 1 cut(s) 41
BglII AGATCT 1 cut(s) 1927
Bme1390I CCNGG 5 cut(s) 700, 1255, 2828, 2940, 3186
Bme18I GGWCC 4 cut(s) 337, 671, 1352, 2688
BmeRI GACNNNNNGTC 2 cut(s) 391, 2584
BmeT110I CYCGRG 2 cut(s) 2853, 3492
BmgT120I GGNCC 5 cut(s) 337, 671, 1352, 2688, 3283
BmiI GGNNCC 7 cut(s) 6, 190, 561, 1353, 2259, 3375, 3421
BmrFI CCNGG 5 cut(s) 700, 1255, 2828, 2940, 3186
BmrI ACTGGG 1 cut(s) 1358
BmtI GCTAGC 1 cut(s) 30
BmuI ACTGGG 1 cut(s) 1358
BpiI GAAGAC 4 cut(s) 169, 1550, 1737, 3057
BpmI CTGGAG 2 cut(s) 1467, 3438
Bpu10I CCTNAGC 5 cut(s) 39, 1479, 2754, 3267, 3690
BpuEI CTTGAG 3 cut(s) 712, 2449, 3194
Bsa29I ATCGAT 1 cut(s) 3766
BsaAI YACGTR 1 cut(s) 713
BsaHI GRCGYC 3 cut(s) 5, 222, 1637
BsaI GGTCTC 1 cut(s) 1902
BsaJI CCNNGG 5 cut(s) 1212, 1254, 2691, 2854, 2912
BsaWI WCCGGW 2 cut(s) 133, 2400
BsaXI ACNNNNNCTCC 4 cut(s) 1023, 1053, 1899, 1929
Bsc4I CCNNNNNNNGG 7 cut(s) 15, 67, 1048, 1448, 1904, 2782, 2812
Bse118I RCCGGY 1 cut(s) 115
Bse1I ACTGG 5 cut(s) 599, 1353, 1355, 1714, 1782
Bse21I CCTNAGG 1 cut(s) 3279
Bse3DI GCAATG 1 cut(s) 582
BseBI CCWGG 5 cut(s) 700, 1255, 2828, 2940, 3186
BseCI ATCGAT 1 cut(s) 3766
BseDI CCNNGG 5 cut(s) 1212, 1254, 2691, 2854, 2912
BseLI CCNNNNNNNGG 7 cut(s) 15, 67, 1048, 1448, 1904, 2782, 2812
BseMI GCAATG 1 cut(s) 582
BseNI ACTGG 5 cut(s) 599, 1353, 1355, 1714, 1782
BseRI GAGGAG 5 cut(s) 2013, 2442, 2925, 3504, 3522
BseSI GKGCMC 1 cut(s) 2165
BseXI GCAGC 8 cut(s) 37, 553, 850, 1118, 2219, 2737, 2914, 2917
BseYI CCCAGC 2 cut(s) 8, 761
BsgI GTGCAG 3 cut(s) 312, 2934, 3452
Bsh1236I CGCG 1 cut(s) 1566
BshFI GGCC 4 cut(s) 35, 44, 115, 3284
BshNI GGYRCC 2 cut(s) 4, 3373
BshVI ATCGAT 1 cut(s) 3766
BsiHKAI GWGCWC 2 cut(s) 1233, 3273
BsiHKCI CYCGRG 2 cut(s) 2853, 3492
BsiSI CCGG 4 cut(s) 13, 116, 134, 2401
BslFI GGGAC 3 cut(s) 1415, 1720, 3457
BslI CCNNNNNNNGG 7 cut(s) 15, 67, 1048, 1448, 1904, 2782, 2812
BsmAI GTCTC 8 cut(s) 258, 624, 658, 682, 1902, 2657, 3576, 3767
BsmBI CGTCTC 1 cut(s) 682
BsmFI GGGAC 3 cut(s) 1415, 1720, 3457
BsmI GAATGC 3 cut(s) 763, 3706, 3761
BsnI GGCC 4 cut(s) 35, 44, 115, 3284
Bso31I GGTCTC 1 cut(s) 1902
BsoBI CYCGRG 2 cut(s) 2853, 3492
Bsp1286I GDGCHC 3 cut(s) 1233, 2165, 3273
BspACI CCGC 8 cut(s) 36, 45, 48, 58, 3536, 3545, 3551, 3554
BspANI GGCC 4 cut(s) 35, 44, 115, 3284
BspDI ATCGAT 1 cut(s) 3766
BspFNI CGCG 1 cut(s) 1566
BspHI TCATGA 1 cut(s) 1873
BspLI GGNNCC 7 cut(s) 6, 190, 561, 1353, 2259, 3375, 3421
BspMAI CTGCAG 3 cut(s) 220, 1725, 2237
BspMI ACCTGC 4 cut(s) 571, 1242, 2616, 3316
BspOI GCTAGC 1 cut(s) 30
BspPI GGATC 4 cut(s) 420, 2336, 3113, 3580
BspQI GCTCTTC 1 cut(s) 2132
BspT107I GGYRCC 2 cut(s) 4, 3373
BspTNI GGTCTC 1 cut(s) 1902
BsrBI CCGCTC 1 cut(s) 38
BsrDI GCAATG 1 cut(s) 582
BsrFI RCCGGY 1 cut(s) 115
BsrI ACTGG 5 cut(s) 599, 1353, 1355, 1714, 1782
BssAI RCCGGY 1 cut(s) 115
BssECI CCNNGG 5 cut(s) 1212, 1254, 2691, 2854, 2912
BssNI GRCGYC 3 cut(s) 5, 222, 1637
BssSI CACGAG 2 cut(s) 1286, 2715
BssT1I CCWWGG 2 cut(s) 1212, 2691
Bst2BI CACGAG 2 cut(s) 1286, 2715
Bst2UI CCWGG 5 cut(s) 700, 1255, 2828, 2940, 3186
Bst6I CTCTTC 4 cut(s) 261, 600, 616, 2132
BstACI GRCGYC 3 cut(s) 5, 222, 1637
BstBAI YACGTR 1 cut(s) 713
BstC8I GCNNGC 6 cut(s) 28, 55, 117, 266, 3086, 3435
BstDSI CCRYGG 1 cut(s) 2912
BstENI CCTNNNNNAGG 1 cut(s) 1446
BstFNI CGCG 1 cut(s) 1566
BstH2I RGCGCY 2 cut(s) 8, 3091
BstHHI GCGC 4 cut(s) 7, 1568, 3090, 3602
BstMAI GTCTC 8 cut(s) 258, 624, 658, 682, 1902, 2657, 3576, 3767
BstNI CCWGG 5 cut(s) 700, 1255, 2828, 2940, 3186
BstNSI RCATGY 5 cut(s) 1677, 2296, 2447, 2479, 2645
BstSCI CCNGG 5 cut(s) 698, 1253, 2826, 2938, 3184
BstSFI CTRYAG 6 cut(s) 216, 495, 1689, 1721, 1794, 2233
BstSLI GKGCMC 1 cut(s) 2165
BstUI CGCG 1 cut(s) 1566
BstV1I GCAGC 8 cut(s) 37, 553, 850, 1118, 2219, 2737, 2914, 2917
BstV2I GAAGAC 4 cut(s) 169, 1550, 1737, 3057
BstX2I RGATCY 1 cut(s) 1927
BstXI CCANNNNNNTGG 3 cut(s) 1003, 1511, 1919
BstYI RGATCY 1 cut(s) 1927
Bsu15I ATCGAT 1 cut(s) 3766
Bsu36I CCTNAGG 1 cut(s) 3279
BsuI GTATCC 1 cut(s) 2408
BsuRI GGCC 4 cut(s) 35, 44, 115, 3284
BsuTUI ATCGAT 1 cut(s) 3766
BtgI CCRYGG 1 cut(s) 2912
BtgZI GCGATG 3 cut(s) 1026, 1547, 3014
BtsI GCAGTG 3 cut(s) 360, 955, 2242
BveI ACCTGC 4 cut(s) 571, 1242, 2616, 3316
Cac8I GCNNGC 6 cut(s) 28, 55, 117, 266, 3086, 3435
CaiI CAGNNNCTG 3 cut(s) 515, 989, 2930
CciI TCATGA 1 cut(s) 1873
CfoI GCGC 4 cut(s) 7, 1568, 3090, 3602
Cfr10I RCCGGY 1 cut(s) 115
Cfr13I GGNCC 5 cut(s) 337, 671, 1352, 2688, 3283
ClaI ATCGAT 1 cut(s) 3766
CseI GACGC 3 cut(s) 257, 935, 1544
Csp6I GTAC 6 cut(s) 170, 719, 1337, 1718, 2639, 2884
CspCI CAANNNNNGTGG 4 cut(s) 2601, 2636, 2901, 2936
CviQI GTAC 6 cut(s) 170, 719, 1337, 1718, 2639, 2884
DinI GGCGCC 1 cut(s) 6
DraI TTTAAA 3 cut(s) 1788, 2196, 2976
DriI GACNNNNNGTC 2 cut(s) 391, 2584
EaeI YGGCCR 1 cut(s) 113
Eam1104I CTCTTC 4 cut(s) 261, 600, 616, 2132
Eam1105I GACNNNNNGTC 2 cut(s) 391, 2584
EarI CTCTTC 4 cut(s) 261, 600, 616, 2132
EciI GGCGGA 2 cut(s) 3525, 3540
Eco130I CCWWGG 2 cut(s) 1212, 2691
Eco31I GGTCTC 1 cut(s) 1902
Eco47I GGWCC 4 cut(s) 337, 671, 1352, 2688
Eco81I CCTNAGG 1 cut(s) 3279
Eco88I CYCGRG 2 cut(s) 2853, 3492
EcoNI CCTNNNNNAGG 1 cut(s) 1446
EcoRI GAATTC 1 cut(s) 856
EcoRII CCWGG 5 cut(s) 698, 1253, 2826, 2938, 3184
EcoT14I CCWWGG 2 cut(s) 1212, 2691
EcoT22I ATGCAT 2 cut(s) 2449, 3741
EgeI GGCGCC 1 cut(s) 6
EheI GGCGCC 1 cut(s) 6
ErhI CCWWGG 2 cut(s) 1212, 2691
Esp3I CGTCTC 1 cut(s) 682
FalI AAGNNNNNCTT 4 cut(s) 533, 565, 579, 611
FaqI GGGAC 3 cut(s) 1415, 1720, 3457
FauNDI CATATG 2 cut(s) 3036, 3079
FblI GTMKAC 3 cut(s) 1640, 2480, 2965
FspBI CTAG 7 cut(s) 27, 173, 1571, 2205, 2277, 2438, 3047
GlaI GCGC 4 cut(s) 6, 1567, 3089, 3601
GsaI CCCAGC 2 cut(s) 12, 765
GsuI CTGGAG 2 cut(s) 1467, 3438
HaeII RGCGCY 2 cut(s) 8, 3091
HaeIII GGCC 4 cut(s) 35, 44, 115, 3284
HapII CCGG 4 cut(s) 13, 116, 134, 2401
HgaI GACGC 3 cut(s) 257, 935, 1544
HhaI GCGC 4 cut(s) 7, 1568, 3090, 3602
Hin1I GRCGYC 3 cut(s) 5, 222, 1637
Hin6I GCGC 4 cut(s) 5, 1566, 3088, 3600
HinP1I GCGC 4 cut(s) 5, 1566, 3088, 3600
HincII GTYRAC 5 cut(s) 468, 2481, 3151, 3391, 3715
HindII GTYRAC 5 cut(s) 468, 2481, 3151, 3391, 3715
HindIII AAGCTT 2 cut(s) 2738, 2797
HpaII CCGG 4 cut(s) 13, 116, 134, 2401
Hpy99I CGWCG 1 cut(s) 227
HpyCH4IV ACGT 4 cut(s) 222, 691, 712, 1637
HpySE526I ACGT 4 cut(s) 222, 691, 712, 1637
Hsp92I GRCGYC 3 cut(s) 5, 222, 1637
HspAI GCGC 4 cut(s) 5, 1566, 3088, 3600
KasI GGCGCC 1 cut(s) 4
KroI GCCGGC 1 cut(s) 115
KroNI GCCGGC 1 cut(s) 117
LguI GCTCTTC 1 cut(s) 2132
LmnI GCTCC 6 cut(s) 23, 275, 430, 2125, 2938, 3419
Lsp1109I GCAGC 8 cut(s) 37, 553, 850, 1118, 2219, 2737, 2914, 2917
MaeI CTAG 7 cut(s) 27, 173, 1571, 2205, 2277, 2438, 3047
MaeII ACGT 4 cut(s) 222, 691, 712, 1637
MaeIII GTNAC 8 cut(s) 269, 580, 601, 910, 1952, 2471, 3259, 3649
MbiI CCGCTC 1 cut(s) 38
MfeI CAATTG 2 cut(s) 2031, 2838
MflI RGATCY 1 cut(s) 1927
MhlI GDGCHC 3 cut(s) 1233, 2165, 3273
Mly113I GGCGCC 1 cut(s) 5
MlyI GAGTC 7 cut(s) 380, 1397, 1727, 1864, 2801, 3026, 3720
Mph1103I ATGCAT 2 cut(s) 2449, 3741
MroNI GCCGGC 1 cut(s) 115
MroXI GAANNNNTTC 2 cut(s) 435, 3166
MseI TTAA 5 cut(s) 551, 782, 1787, 2195, 2975
MslI CAYNNNNRTG 2 cut(s) 2220, 3744
MspA1I CMGCKG 4 cut(s) 50, 863, 1109, 2927
MspI CCGG 4 cut(s) 13, 116, 134, 2401
MspR9I CCNGG 5 cut(s) 700, 1255, 2828, 2940, 3186
MunI CAATTG 2 cut(s) 2031, 2838
Mva1269I GAATGC 3 cut(s) 763, 3706, 3761
MvaI CCWGG 5 cut(s) 700, 1255, 2828, 2940, 3186
MvnI CGCG 1 cut(s) 1566
NaeI GCCGGC 1 cut(s) 117
NarI GGCGCC 1 cut(s) 5
NdeI CATATG 2 cut(s) 3036, 3079
NgoMIV GCCGGC 1 cut(s) 115
NheI GCTAGC 1 cut(s) 26
NlaIV GGNNCC 7 cut(s) 6, 190, 561, 1353, 2259, 3375, 3421
NmuCI GTSAC 7 cut(s) 269, 601, 910, 1952, 2471, 3259, 3649
NsiI ATGCAT 2 cut(s) 2449, 3741
NspI RCATGY 5 cut(s) 1677, 2296, 2447, 2479, 2645
PaeR7I CTCGAG 1 cut(s) 3492
PagI TCATGA 1 cut(s) 1873
PaqCI CACCTGC 2 cut(s) 1242, 3316
PciI ACATGT 2 cut(s) 2292, 2475
PciSI GCTCTTC 1 cut(s) 2132
PcsI WCGNNNNNNNCGW 2 cut(s) 2713, 3037
PctI GAATGC 3 cut(s) 763, 3706, 3761
PdiI GCCGGC 1 cut(s) 117
PdmI GAANNNNTTC 2 cut(s) 435, 3166
PflMI CCANNNNNTGG 2 cut(s) 1904, 2782
PfoI TCCNGGA 3 cut(s) 698, 2938, 3184
PleI GAGTC 7 cut(s) 380, 1397, 1727, 1863, 2800, 3025, 3719
PluTI GGCGCC 1 cut(s) 8
PpsI GAGTC 7 cut(s) 380, 1397, 1727, 1863, 2800, 3025, 3719
Ppu21I YACGTR 1 cut(s) 713
PscI ACATGT 2 cut(s) 2292, 2475
Psp6I CCWGG 5 cut(s) 698, 1253, 2826, 2938, 3184
PspFI CCCAGC 2 cut(s) 8, 761
PspGI CCWGG 5 cut(s) 698, 1253, 2826, 2938, 3184
PspN4I GGNNCC 7 cut(s) 6, 190, 561, 1353, 2259, 3375, 3421
PspPI GGNCC 5 cut(s) 337, 671, 1352, 2688, 3283
PsrI GAACNNNNNNTAC 2 cut(s) 2545, 2577
PstI CTGCAG 3 cut(s) 220, 1725, 2237
PstNI CAGNNNCTG 3 cut(s) 515, 989, 2930
PsuI RGATCY 1 cut(s) 1927
PvuII CAGCTG 3 cut(s) 863, 1109, 2927
RsaI GTAC 6 cut(s) 171, 720, 1338, 1719, 2640, 2885
RsaNI GTAC 6 cut(s) 170, 719, 1337, 1718, 2639, 2884
RseI CAYNNNNRTG 2 cut(s) 2220, 3744
SalI GTCGAC 1 cut(s) 2479
SapI GCTCTTC 1 cut(s) 2132
SaqAI TTAA 5 cut(s) 551, 782, 1787, 2195, 2975
Sau96I GGNCC 5 cut(s) 337, 671, 1352, 2688, 3283
SchI GAGTC 7 cut(s) 380, 1397, 1727, 1864, 2801, 3026, 3720
ScrFI CCNGG 5 cut(s) 700, 1255, 2828, 2940, 3186
SduI GDGCHC 3 cut(s) 1233, 2165, 3273
SfcI CTRYAG 6 cut(s) 216, 495, 1689, 1721, 1794, 2233
SfiI GGCCNNNNNGGCC 1 cut(s) 41
SfoI GGCGCC 1 cut(s) 6
Sfr274I CTCGAG 1 cut(s) 3492
SinI GGWCC 4 cut(s) 337, 671, 1352, 2688
SlaI CTCGAG 1 cut(s) 3492
SmiMI CAYNNNNRTG 2 cut(s) 2220, 3744
SmlI CTYRAG 4 cut(s) 727, 2464, 3209, 3492
SmoI CTYRAG 4 cut(s) 727, 2464, 3209, 3492
SpeI ACTAGT 1 cut(s) 172
SsiI CCGC 8 cut(s) 36, 45, 48, 58, 3536, 3545, 3551, 3554
SspDI GGCGCC 1 cut(s) 4
SspI AATATT 3 cut(s) 1435, 1990, 2500
SspMI CTAG 7 cut(s) 27, 173, 1571, 2205, 2277, 2438, 3047
StyD4I CCNGG 5 cut(s) 698, 1253, 2826, 2938, 3184
StyI CCWWGG 2 cut(s) 1212, 2691
TaiI ACGT 4 cut(s) 225, 694, 715, 1640
TaqI TCGA 9 cut(s) 225, 395, 555, 686, 2480, 2707, 3252, 3493, 3766
TatI WGTACW 2 cut(s) 1336, 2638
TauI GCSGC 5 cut(s) 38, 47, 50, 60, 3556
Tru1I TTAA 5 cut(s) 551, 782, 1787, 2195, 2975
Tru9I TTAA 5 cut(s) 551, 782, 1787, 2195, 2975
TseFI GTSAC 7 cut(s) 269, 601, 910, 1952, 2471, 3259, 3649
TseI GCWGC 8 cut(s) 50, 566, 863, 1106, 2232, 2750, 2927, 2930
Tsp45I GTSAC 7 cut(s) 269, 601, 910, 1952, 2471, 3259, 3649
TspGWI ACGGA 5 cut(s) 288, 658, 835, 2595, 3116
Van91I CCANNNNNTGG 2 cut(s) 1904, 2782
VpaK11BI GGWCC 4 cut(s) 337, 671, 1352, 2688
XagI CCTNNNNNAGG 1 cut(s) 1446
XapI RAATTY 4 cut(s) 856, 998, 1204, 2766
XbaI TCTAGA 1 cut(s) 1570
XceI RCATGY 5 cut(s) 1677, 2296, 2447, 2479, 2645
XcmI CCANNNNNNNNNTGG 1 cut(s) 1261
XhoI CTCGAG 1 cut(s) 3492
XmiI GTMKAC 3 cut(s) 1640, 2480, 2965
XmnI GAANNNNTTC 2 cut(s) 435, 3166
XspI CTAG 7 cut(s) 27, 173, 1571, 2205, 2277, 2438, 3047
ZraI GACGTC 2 cut(s) 223, 1638
Zsp2I ATGCAT 2 cut(s) 2449, 3741
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.