pycom11g26440

CW-type Zinc Finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0009959
Physical Location & Seq
Forward (+)
28996426 .. 29000827
4402 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2868 bp
ATGATTTCTGTGGGGACTAGGGATGCAAGGAAGGGGATAGAATTAGGGTTTGCAGGTAGGATAGAGATGGAGGATACTGAGCTTGAAGAAGGCGAAGCTTGCTCTTCCCACATCAATGAATACGATTCCAACATCGATGTCGATGTTGCTCTCTCTTACATCGATGATAAAATTCAGGATGTTTTGGGACACTTCCAGAAAGAATTTGAAGGTGGAGTTTCTGCGGAGAATTTGGGGGCAAAGTGGGGTGGGTATGGCTCATTTTTACCTTCCTATCAGAGGTCTCCAGTGTCGTCTCATCCAAAGACTCCGCAAAAAGTTCAGAACTGCAGCTTACTCAAATCTCCCAACAATTTGAAACTTGAGGCTGGTCAACGTAACAACGTAGTTTGTTATAATACACCTCAGTCAGTGGGAGTTGGACCTGCTTCTACAGGTTCCACTTCGCTTGTTGCACCAAAGGCACCCTCAGCAAATGATCCAGTCAAACAAGAAGGAAGTGTGTCATTAATTCAAGCTGACCAGTACGCTCCTCGGCATGAATCTGCAAACAAGAAAGATATTAATTCATCAGACCAGAAAACACTGAAGGTGCGACTTAAAGTGGGATCGGATAACTTGTCAACACGAAAAAATGCTATCTACAGTGGGCTTGGTCTTGATGCCACATCGTCTTCCTCAGTAGATGATAGCCCTTCCGAGAGTGAAGGGATATCTCATGAGCCTCAAGATGCCCCATTTGAATCTCCCACCAGTATTCTTCAGATTATGACTTCCTTTCCCGTGCATGAGGATATGATGTCACCTCTTCACGACGACCTCATTTACTTAATTGAAAAGGAAAAGCTCCTAAAAGAGGGTAGAGTGAATGGAAATCATACCATGGAGGGAGGTGGGAAAGTGTCAGGATCGAGGAAAACAAAATCGGTTGAAAGAAATGATTTGTCAGCAGAATCAAAGAGTGGGAAAAATAAGGATGGAACTGGGCTTCTGTCAAAGAAGGAACATGACATTGACATGTTTGCTTGTGAGGAGCTTGTTTCTAAAACCTTGAAGCTCCCACTTCTATCTAGTTCATTTTCTACTGTCAATGATGTGATAAAGAGCAAAGAAATGGATAAGAAAACTTTAGTGAGGGATAAGGTCTTCCCTGGTCAAGCAGAAGATGAACCAATGGAGCCAATTTCCACCCAAGAGGATGGCTGGGTTGAAAAGCGAAAAGCCAATTTGGCTGGAAAGGTTCAGGAAGATAGAAAAGTGAATGTGAGTGAGGACGTTTTGGTTCATCCAAAGAAAGAGGGCCATTGCAGAGTAGAGAAGACTTATGAATCAGTAAAAGGTGACTTAAATGTTTCCAAAGGGAGGAAAGCTCTAAATACTGAAATCATGGACCATTCAAAGCAGAAAGTCAATCAGAAGGCTACATCACATGAGGTAGATGATAGAAGACTATTTTCTGGGAAGGAGTATCCAGTACCTGGGGAGAAAAACAAACAGAAGGAAAGTCACAGGAACCCGGTTGCTGAGTTTCCAAAAGAAAGCTCAAGGGTTGGTTCTTCTTCAGCGCCCAAAATGAAGGGCACTCTTGCAAATAGTTCTAATATTGATCAAAGCAGGGATACATATAGAGATTTGTTTGGGGATATAGACGAAAAGAACCAAATGAATTTATCTGAACTGCTGTTTGAAGATAAGCTTAAGGAATCTGATGCTGTTGCAAAAAGCACATCTGCAGTTAACAGTGCGTCAAGGGAGAGACAAAGTGGCAATAAATTTGATAAACCATCAATTGCAGACTCATATCCTATGATGGCTTCAAATATAGCCCCACGCTCTGGAAATGGGCCTGTGTCTGCTGTGCCTCCTGCTACGGGGGCTCCTGCACTGATAAAAGATAATTGGGTGTGTTGTGACAAGTGTCAGAAATGGCGGCTTCTTCCATATGGTACAAACCCGGAGAGCCTACCTGAGAAGTGGCTATGTAGCATGCTTAATTGGCTGCCTGGGATGAATCGGTGTAATGTAAACGAGGAGGAAACAACAGAAAAGACGAAAGCTCTAATTGCACAGTACCAAGTTCCTGCCCCTGAGAATCAAAATAATCTGCCCAGAAATCCTGGTTTAATGGAGGGAGTGGCATTGCCTAAGCCTCGAAACCCTGACCAAAACCTTGAAAATTTTGGTTTGCCTGCCATGCCTAGTGGTGGAAAGAAAAAAATTGGAGCAAAAGAATTGCCAAATGCAACTAATAAAGATGGTTCCATTCAGTTTCCAAACTCTATGAAGAAAACCATGCAGGCATCAGTGAAGAGTAGAAGCTTGAATGATGTGAATCAGTCTCCACTGCCAAGTGAACCTGATTTGCAGCAGCTAAGCAAGTCCAGTGACATGGCAGTGGAGAAACGAAAACACAAGTACAGGGAGAAGCATAGAGATTTAGAGCGCTCTACTGGGGGAGGTGACTTCAAGAATTTAAAGATAAAGAATAGAAGAGACTCTGATCCAGATTCTTCTAGAGCTTCCAAGAAAATCAAGACTGAAGTTAAACATATCAATGATGAAGGATGGGCATCAGACTACAGTGGGGCAGTTGGGGAGGTAGGTCCTAGCTCAAGTGGTGGTTTTCTGACTGCTGCTGCAGGGAAAGATCAAATTAAGAACAGGTCACATGCCGCTTCTATTACAAAAGCAAAAGATGAAGCTTTCTTAAATAGTCGATCCTTAGATGTGGGAAACATTGATTCTAAAGGTAGATCAAAAAAGAGAAAACTGAAGGAATCCTCCGATTCTCAAATTCATATGGGTTCCATTCCAGCTACAGGGCATTATGTTGAGCGATCATTCAGTCGCCGTGAAGGAGGAGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-CW

Protein Analysis

956

Amino Acids

104.61

Weight (kDa)

8.33

Isoelectric Point (pI)

48.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CW PF07496 633 - 679 2e-15 CW-type Zinc Finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0009959)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G62900 AT3G62900 AT3G62900
fragaria_vesca FvH4_2g25070
malus_domestica MD03G1282000.v1.1 MD11G1301800.v1.1
prunus_persica Prupe.8G255400_v2.0.a1
pyrus_communis pycom03g22260 pycom03g22270 pycom03g22280 pycom11g26440
rosa_chinensis RchiOBHm_Chr6g0293091
rosa_laevigata RLG00000011972
rosa_multiflora Rmu_sc0001042.1_g000002
rosa_roxburghii Rroxscaffold_7G00174420
rosa_rugosa Rorug06G0232700
rosa_samantha Rh6AG345500 Rh6BG353300 Rh6CG359700 Rh6DG345600
rosa_wichuraiana Rw6G030110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 396
Acc36I ACCTGC 2 cut(s) 44, 433
AccB1I GGYRCC 1 cut(s) 463
AccB7I CCANNNNNTGG 2 cut(s) 1478, 1835
AciI CCGC 4 cut(s) 224, 311, 1930, 2673
AclWI GGATC 5 cut(s) 473, 616, 916, 2495, 2712
AcsI RAATTY 8 cut(s) 171, 203, 229, 1666, 1772, 2176, 2470, 2793
AcuI CTGAAG 5 cut(s) 608, 746, 1545, 2559, 2792
AfaI GTAC 5 cut(s) 527, 1476, 1948, 2072, 2417
AfeI AGCGCT 1 cut(s) 2444
AfiI CCNNNNNNNGG 8 cut(s) 279, 856, 1362, 1478, 1835, 1871, 2204, 2819
AflII CTTAAG 1 cut(s) 1697
AflIII ACRYGT 1 cut(s) 1017
AjnI CCWGG 4 cut(s) 1150, 1477, 2002, 2116
Alw26I GTCTC 5 cut(s) 288, 300, 1750, 2343, 2487
AlwI GGATC 5 cut(s) 473, 616, 916, 2495, 2712
AlwNI CAGNNNCTG 1 cut(s) 1478
Aor51HI AGCGCT 1 cut(s) 2444
AoxI GGCC 2 cut(s) 1300, 1844
ApeKI GCWGC 6 cut(s) 330, 1999, 2365, 2368, 2633, 2636
ApoI RAATTY 8 cut(s) 171, 203, 229, 1666, 1772, 2176, 2470, 2793
AseI ATTAAT 2 cut(s) 509, 564
AspLEI GCGC 2 cut(s) 1567, 2445
AspS9I GGNCC 5 cut(s) 422, 1300, 1390, 1844, 2603
AsuC2I CCSGG 2 cut(s) 1517, 1955
AsuHPI GGTGA 3 cut(s) 795, 1352, 2471
AvaII GGWCC 3 cut(s) 422, 1390, 2603
BaeGI GKGCMC 1 cut(s) 1583
BanI GGYRCC 1 cut(s) 463
BanII GRGCYC 1 cut(s) 1879
BbsI GAAGAC 4 cut(s) 666, 1138, 1325, 1453
BbvCI CCTCAGC 1 cut(s) 469
BbvI GCAGC 6 cut(s) 342, 1986, 2377, 2380, 2620, 2623
BccI CCATC 7 cut(s) 61, 971, 1193, 1792, 1804, 2249, 2559
BceAI ACGGC 1 cut(s) 2835
BciT130I CCWGG 4 cut(s) 1152, 1479, 2004, 2118
BciVI GTATCC 3 cut(s) 67, 1479, 1612
BclI TGATCA 1 cut(s) 1606
BcnI CCSGG 2 cut(s) 1517, 1955
BcoDI GTCTC 5 cut(s) 288, 300, 1750, 2343, 2487
BfaI CTAG 5 cut(s) 18, 1071, 2199, 2514, 2607
BfmI CTRYAG 7 cut(s) 328, 432, 643, 1731, 2578, 2637, 2817
BfoI RGCGCY 2 cut(s) 1568, 2446
BfrI CTTAAG 1 cut(s) 1697
BfuAI ACCTGC 2 cut(s) 44, 433
BfuI GTATCC 3 cut(s) 67, 1479, 1612
BglI GCCNNNNNGGC 1 cut(s) 1229
BisI GCNGC 8 cut(s) 331, 1931, 2000, 2366, 2369, 2634, 2637, 2673
BlpI GCTNAGC 1 cut(s) 2372
BlsI GCNGC 8 cut(s) 332, 1932, 2001, 2367, 2370, 2635, 2638, 2674
Bme1390I CCNGG 6 cut(s) 1152, 1479, 1517, 1955, 2004, 2118
Bme18I GGWCC 3 cut(s) 422, 1390, 2603
BmgT120I GGNCC 5 cut(s) 422, 1300, 1390, 1844, 2603
BmiI GGNNCC 7 cut(s) 439, 465, 1179, 1514, 1878, 2260, 2806
BmrFI CCNGG 6 cut(s) 1152, 1479, 1517, 1955, 2004, 2118
BmrI ACTGGG 2 cut(s) 993, 2460
BmsI GCATC 6 cut(s) 13, 652, 721, 1699, 2309, 2579
BmuI ACTGGG 2 cut(s) 993, 2460
BoxI GACNNNNGTC 1 cut(s) 1917
BpiI GAAGAC 4 cut(s) 666, 1138, 1325, 1453
BplI GAGNNNNNCTC 2 cut(s) 1354, 1386
BpmI CTGGAG 1 cut(s) 270
Bpu10I CCTNAGC 2 cut(s) 469, 2145
Bpu1102I GCTNAGC 1 cut(s) 2372
BpuEI CTTGAG 4 cut(s) 383, 711, 1528, 2596
BpuMI CCSGG 2 cut(s) 1517, 1955
Bsa29I ATCGAT 2 cut(s) 135, 162
BsaBI GATNNNNATC 2 cut(s) 2331, 2569
BsaI GGTCTC 1 cut(s) 288
BsaJI CCNNGG 5 cut(s) 533, 882, 1150, 1478, 2003
BsaXI ACNNNNNCTCC 2 cut(s) 1861, 1891
Bsc4I CCNNNNNNNGG 8 cut(s) 279, 856, 1362, 1478, 1835, 1871, 2204, 2819
Bse1I ACTGG 8 cut(s) 287, 482, 523, 753, 988, 1472, 2382, 2455
Bse3DI GCAATG 2 cut(s) 1303, 2138
Bse8I GATNNNNATC 2 cut(s) 2331, 2569
BseBI CCWGG 4 cut(s) 1152, 1479, 2004, 2118
BseCI ATCGAT 2 cut(s) 135, 162
BseDI CCNNGG 5 cut(s) 533, 882, 1150, 1478, 2003
BseGI GGATG 8 cut(s) 28, 184, 298, 982, 1204, 1285, 2013, 2570
BseJI GATNNNNATC 2 cut(s) 2331, 2569
BseLI CCNNNNNNNGG 8 cut(s) 279, 856, 1362, 1478, 1835, 1871, 2204, 2819
BseMI GCAATG 2 cut(s) 1303, 2138
BseMII CTCAG 7 cut(s) 69, 419, 483, 693, 1515, 1959, 2079
BseNI ACTGG 8 cut(s) 287, 482, 523, 753, 988, 1472, 2382, 2455
BseRI GAGGAG 3 cut(s) 522, 1046, 2045
BseSI GKGCMC 1 cut(s) 1583
BseXI GCAGC 6 cut(s) 342, 1986, 2377, 2380, 2620, 2623
BseYI CCCAGC 1 cut(s) 1203
BsgI GTGCAG 1 cut(s) 1866
BshFI GGCC 2 cut(s) 1302, 1846
BshNI GGYRCC 1 cut(s) 463
BshVI ATCGAT 2 cut(s) 135, 162
BsiSI CCGG 2 cut(s) 1517, 1955
BslFI GGGAC 2 cut(s) 28, 201
BslI CCNNNNNNNGG 8 cut(s) 279, 856, 1362, 1478, 1835, 1871, 2204, 2819
BsmAI GTCTC 5 cut(s) 288, 300, 1750, 2343, 2487
BsmBI CGTCTC 1 cut(s) 300
BsmFI GGGAC 2 cut(s) 28, 201
BsnI GGCC 2 cut(s) 1302, 1846
Bso31I GGTCTC 1 cut(s) 288
Bsp1286I GDGCHC 2 cut(s) 1583, 1879
Bsp143I GATC 9 cut(s) 478, 608, 908, 1606, 2500, 2647, 2717, 2753, 2837
Bsp1720I GCTNAGC 1 cut(s) 2372
Bsp19I CCATGG 1 cut(s) 882
BspACI CCGC 4 cut(s) 224, 311, 1930, 2673
BspANI GGCC 2 cut(s) 1302, 1846
BspCNI CTCAG 7 cut(s) 70, 418, 482, 692, 1516, 1960, 2080
BspDI ATCGAT 2 cut(s) 135, 162
BspHI TCATGA 1 cut(s) 718
BspLI GGNNCC 7 cut(s) 439, 465, 1179, 1514, 1878, 2260, 2806
BspMAI CTGCAG 3 cut(s) 332, 1735, 2641
BspMI ACCTGC 2 cut(s) 44, 433
BspPI GGATC 5 cut(s) 473, 616, 916, 2495, 2712
BspQI GCTCTTC 1 cut(s) 109
BspT107I GGYRCC 1 cut(s) 463
BspTI CTTAAG 1 cut(s) 1697
BspTNI GGTCTC 1 cut(s) 288
BsrDI GCAATG 2 cut(s) 1303, 2138
BsrI ACTGG 8 cut(s) 287, 482, 523, 753, 988, 1472, 2382, 2455
BssECI CCNNGG 5 cut(s) 533, 882, 1150, 1478, 2003
BssMI GATC 9 cut(s) 478, 608, 908, 1606, 2500, 2647, 2717, 2753, 2837
BssT1I CCWWGG 1 cut(s) 882
Bst2UI CCWGG 4 cut(s) 1152, 1479, 2004, 2118
Bst4CI ACNGT 5 cut(s) 647, 1087, 1742, 2070, 2582
Bst6I CTCTTC 4 cut(s) 109, 813, 2303, 2485
BstAFI CTTAAG 1 cut(s) 1697
BstC8I GCNNGC 4 cut(s) 100, 1988, 2190, 2298
BstDSI CCRYGG 1 cut(s) 882
BstENI CCTNNNNNAGG 2 cut(s) 277, 854
BstF5I GGATG 8 cut(s) 28, 184, 298, 982, 1204, 1285, 2013, 2570
BstH2I RGCGCY 2 cut(s) 1568, 2446
BstHHI GCGC 2 cut(s) 1567, 2445
BstKTI GATC 9 cut(s) 481, 611, 911, 1609, 2503, 2650, 2720, 2756, 2840
BstMAI GTCTC 5 cut(s) 288, 300, 1750, 2343, 2487
BstMBI GATC 9 cut(s) 478, 608, 908, 1606, 2500, 2647, 2717, 2753, 2837
BstMWI GCNNNNNNNGC 8 cut(s) 99, 461, 470, 1229, 1874, 1996, 2063, 2194
BstNI CCWGG 4 cut(s) 1152, 1479, 2004, 2118
BstNSI RCATGY 3 cut(s) 1021, 1990, 2672
BstPAI GACNNNNGTC 1 cut(s) 1917
BstSCI CCNGG 6 cut(s) 1150, 1477, 1515, 1953, 2002, 2116
BstSFI CTRYAG 7 cut(s) 328, 432, 643, 1731, 2578, 2637, 2817
BstSLI GKGCMC 1 cut(s) 1583
BstV1I GCAGC 6 cut(s) 342, 1986, 2377, 2380, 2620, 2623
BstV2I GAAGAC 4 cut(s) 666, 1138, 1325, 1453
BstXI CCANNNNNNTGG 2 cut(s) 1199, 2389
Bsu15I ATCGAT 2 cut(s) 135, 162
BsuI GTATCC 3 cut(s) 67, 1479, 1612
BsuRI GGCC 2 cut(s) 1302, 1846
BsuTUI ATCGAT 2 cut(s) 135, 162
BtgI CCRYGG 1 cut(s) 882
BtsCI GGATG 8 cut(s) 28, 184, 298, 982, 1204, 1285, 2013, 2570
BtsI GCAGTG 2 cut(s) 2342, 2400
BveI ACCTGC 2 cut(s) 44, 433
Cac8I GCNNGC 4 cut(s) 100, 1988, 2190, 2298
CaiI CAGNNNCTG 1 cut(s) 1478
CciI TCATGA 1 cut(s) 718
CfoI GCGC 2 cut(s) 1567, 2445
Cfr13I GGNCC 5 cut(s) 422, 1300, 1390, 1844, 2603
ClaI ATCGAT 2 cut(s) 135, 162
CseI GACGC 1 cut(s) 1734
Csp6I GTAC 5 cut(s) 526, 1475, 1947, 2071, 2416
CspCI CAANNNNNGTGG 2 cut(s) 430, 465
CviQI GTAC 5 cut(s) 526, 1475, 1947, 2071, 2416
DpnI GATC 9 cut(s) 480, 610, 910, 1608, 2502, 2649, 2719, 2755, 2839
DpnII GATC 9 cut(s) 478, 608, 908, 1606, 2500, 2647, 2717, 2753, 2837
DraI TTTAAA 1 cut(s) 2475
Eam1104I CTCTTC 4 cut(s) 109, 813, 2303, 2485
EarI CTCTTC 4 cut(s) 109, 813, 2303, 2485
Eco130I CCWWGG 1 cut(s) 882
Eco24I GRGCYC 1 cut(s) 1879
Eco31I GGTCTC 1 cut(s) 288
Eco32I GATATC 1 cut(s) 714
Eco47I GGWCC 3 cut(s) 422, 1390, 2603
Eco47III AGCGCT 1 cut(s) 2444
Eco57I CTGAAG 5 cut(s) 608, 746, 1545, 2559, 2792
EcoNI CCTNNNNNAGG 2 cut(s) 277, 854
EcoO109I RGGNCCY 1 cut(s) 2603
EcoRII CCWGG 4 cut(s) 1150, 1477, 2002, 2116
EcoRV GATATC 1 cut(s) 714
EcoT14I CCWWGG 1 cut(s) 882
EcoT38I GRGCYC 1 cut(s) 1879
ErhI CCWWGG 1 cut(s) 882
Esp3I CGTCTC 1 cut(s) 300
FalI AAGNNNNNCTT 2 cut(s) 1680, 1712
FaqI GGGAC 2 cut(s) 28, 201
FauNDI CATATG 2 cut(s) 1942, 2799
FbaI TGATCA 1 cut(s) 1606
Fnu4HI GCNGC 8 cut(s) 331, 1931, 2000, 2366, 2369, 2634, 2637, 2673
FokI GGATG 8 cut(s) 35, 191, 285, 989, 1211, 1272, 2020, 2577
FriOI GRGCYC 1 cut(s) 1879
Fsp4HI GCNGC 8 cut(s) 331, 1931, 2000, 2366, 2369, 2634, 2637, 2673
FspBI CTAG 5 cut(s) 18, 1071, 2199, 2514, 2607
GlaI GCGC 2 cut(s) 1566, 2444
GluI GCNGC 8 cut(s) 331, 1931, 2000, 2366, 2369, 2634, 2637, 2673
GsaI CCCAGC 1 cut(s) 1207
GsuI CTGGAG 1 cut(s) 270
HaeII RGCGCY 2 cut(s) 1568, 2446
HaeIII GGCC 2 cut(s) 1302, 1846
HapII CCGG 2 cut(s) 1517, 1955
HgaI GACGC 1 cut(s) 1734
HhaI GCGC 2 cut(s) 1567, 2445
Hin6I GCGC 2 cut(s) 1565, 2443
HinP1I GCGC 2 cut(s) 1565, 2443
HincII GTYRAC 3 cut(s) 374, 624, 1738
HindII GTYRAC 3 cut(s) 374, 624, 1738
HindIII AAGCTT 4 cut(s) 96, 1694, 2317, 2700
HpaI GTTAAC 1 cut(s) 1738
HpaII CCGG 2 cut(s) 1517, 1955
HphI GGTGA 3 cut(s) 795, 1352, 2471
Hpy166II GTNNAC 5 cut(s) 374, 624, 1738, 2026, 2354
Hpy8I GTNNAC 5 cut(s) 374, 624, 1738, 2026, 2354
Hpy99I CGWCG 1 cut(s) 818
HpyCH4III ACNGT 5 cut(s) 647, 1087, 1742, 2070, 2582
HpyCH4IV ACGT 3 cut(s) 376, 384, 1275
HpyF10VI GCNNNNNNNGC 8 cut(s) 99, 461, 470, 1229, 1874, 1996, 2063, 2194
HpySE526I ACGT 3 cut(s) 376, 384, 1275
HspAI GCGC 2 cut(s) 1565, 2443
Ksp22I TGATCA 1 cut(s) 1606
KspAI GTTAAC 1 cut(s) 1738
Kzo9I GATC 9 cut(s) 478, 608, 908, 1606, 2500, 2647, 2717, 2753, 2837
LguI GCTCTTC 1 cut(s) 109
LmnI GCTCC 7 cut(s) 535, 852, 1033, 1062, 1177, 1882, 2222
Lsp1109I GCAGC 6 cut(s) 342, 1986, 2377, 2380, 2620, 2623
LweI GCATC 6 cut(s) 13, 652, 721, 1699, 2309, 2579
MaeI CTAG 5 cut(s) 18, 1071, 2199, 2514, 2607
MaeII ACGT 3 cut(s) 376, 384, 1275
MaeIII GTNAC 8 cut(s) 377, 801, 1340, 1505, 1910, 2384, 2459, 2664
MalI GATC 9 cut(s) 480, 610, 910, 1608, 2502, 2649, 2719, 2755, 2839
MboI GATC 9 cut(s) 478, 608, 908, 1606, 2500, 2647, 2717, 2753, 2837
MfeI CAATTG 1 cut(s) 1788
MhlI GDGCHC 2 cut(s) 1583, 1879
MlyI GAGTC 3 cut(s) 301, 1790, 2489
MmeI TCCRAC 2 cut(s) 153, 400
MslI CAYNNNNRTG 4 cut(s) 114, 1016, 2393, 2553
MspCI CTTAAG 1 cut(s) 1697
MspI CCGG 2 cut(s) 1517, 1955
MspR9I CCNGG 6 cut(s) 1152, 1479, 1517, 1955, 2004, 2118
MunI CAATTG 1 cut(s) 1788
MvaI CCWGG 4 cut(s) 1152, 1479, 2004, 2118
MwoI GCNNNNNNNGC 8 cut(s) 99, 461, 470, 1229, 1874, 1996, 2063, 2194
NciI CCSGG 2 cut(s) 1517, 1955
NcoI CCATGG 1 cut(s) 882
NdeI CATATG 2 cut(s) 1942, 2799
NdeII GATC 9 cut(s) 478, 608, 908, 1606, 2500, 2647, 2717, 2753, 2837
NlaIV GGNNCC 7 cut(s) 439, 465, 1179, 1514, 1878, 2260, 2806
NmeAIII GCCGAG 1 cut(s) 514
NmuCI GTSAC 7 cut(s) 801, 1340, 1505, 1910, 2384, 2459, 2664
NspI RCATGY 3 cut(s) 1021, 1990, 2672
PaeI GCATGC 1 cut(s) 1990
PagI TCATGA 1 cut(s) 718
PciI ACATGT 1 cut(s) 1017
PciSI GCTCTTC 1 cut(s) 109
PflMI CCANNNNNTGG 2 cut(s) 1478, 1835
PkrI GCNGC 8 cut(s) 332, 1932, 2001, 2367, 2370, 2635, 2638, 2674
PleI GAGTC 3 cut(s) 301, 1790, 2489
PpsI GAGTC 3 cut(s) 301, 1790, 2489
PpuMI RGGWCCY 1 cut(s) 2603
PscI ACATGT 1 cut(s) 1017
PshAI GACNNNNGTC 1 cut(s) 1917
PshBI ATTAAT 2 cut(s) 509, 564
PsiI TTATAA 1 cut(s) 396
Psp5II RGGWCCY 1 cut(s) 2603
Psp6I CCWGG 4 cut(s) 1150, 1477, 2002, 2116
PspFI CCCAGC 1 cut(s) 1203
PspGI CCWGG 4 cut(s) 1150, 1477, 2002, 2116
PspN4I GGNNCC 7 cut(s) 439, 465, 1179, 1514, 1878, 2260, 2806
PspPI GGNCC 5 cut(s) 422, 1300, 1390, 1844, 2603
PspPPI RGGWCCY 1 cut(s) 2603
PstI CTGCAG 3 cut(s) 332, 1735, 2641
PstNI CAGNNNCTG 1 cut(s) 1478
RsaI GTAC 5 cut(s) 527, 1476, 1948, 2072, 2417
RsaNI GTAC 5 cut(s) 526, 1475, 1947, 2071, 2416
RseI CAYNNNNRTG 4 cut(s) 114, 1016, 2393, 2553
SapI GCTCTTC 1 cut(s) 109
SatI GCNGC 8 cut(s) 331, 1931, 2000, 2366, 2369, 2634, 2637, 2673
Sau3AI GATC 9 cut(s) 478, 608, 908, 1606, 2500, 2647, 2717, 2753, 2837
Sau96I GGNCC 5 cut(s) 422, 1300, 1390, 1844, 2603
SchI GAGTC 3 cut(s) 301, 1790, 2489
ScrFI CCNGG 6 cut(s) 1152, 1479, 1517, 1955, 2004, 2118
SduI GDGCHC 2 cut(s) 1583, 1879
SfaNI GCATC 6 cut(s) 13, 652, 721, 1699, 2309, 2579
SfcI CTRYAG 7 cut(s) 328, 432, 643, 1731, 2578, 2637, 2817
SinI GGWCC 3 cut(s) 422, 1390, 2603
SmiMI CAYNNNNRTG 4 cut(s) 114, 1016, 2393, 2553
SmlI CTYRAG 5 cut(s) 362, 726, 1543, 1697, 2611
SmoI CTYRAG 5 cut(s) 362, 726, 1543, 1697, 2611
SphI GCATGC 1 cut(s) 1990
SsiI CCGC 4 cut(s) 224, 311, 1930, 2673
SspI AATATT 1 cut(s) 1603
SspMI CTAG 5 cut(s) 18, 1071, 2199, 2514, 2607
StyD4I CCNGG 6 cut(s) 1150, 1477, 1515, 1953, 2002, 2116
StyI CCWWGG 1 cut(s) 882
TaaI ACNGT 5 cut(s) 647, 1087, 1742, 2070, 2582
TaiI ACGT 3 cut(s) 379, 387, 1278
TaqI TCGA 6 cut(s) 135, 141, 162, 911, 2152, 2716
TatI WGTACW 1 cut(s) 2415
TauI GCSGC 2 cut(s) 1933, 2675
TseFI GTSAC 7 cut(s) 801, 1340, 1505, 1910, 2384, 2459, 2664
TseI GCWGC 6 cut(s) 330, 1999, 2365, 2368, 2633, 2636
Tsp45I GTSAC 7 cut(s) 801, 1340, 1505, 1910, 2384, 2459, 2664
Van91I CCANNNNNTGG 2 cut(s) 1478, 1835
Vha464I CTTAAG 1 cut(s) 1697
VpaK11BI GGWCC 3 cut(s) 422, 1390, 2603
VspI ATTAAT 2 cut(s) 509, 564
XagI CCTNNNNNAGG 2 cut(s) 277, 854
XapI RAATTY 8 cut(s) 171, 203, 229, 1666, 1772, 2176, 2470, 2793
XbaI TCTAGA 1 cut(s) 2513
XceI RCATGY 3 cut(s) 1021, 1990, 2672
XspI CTAG 5 cut(s) 18, 1071, 2199, 2514, 2607
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.