CW-type Zinc Finger
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G62900 AT3G62900 AT3G62900 |
| fragaria_vesca | FvH4_2g25070 |
| malus_domestica | MD03G1282000.v1.1 MD11G1301800.v1.1 |
| prunus_persica | Prupe.8G255400_v2.0.a1 |
| pyrus_communis | pycom03g22260 pycom03g22270 pycom03g22280 pycom11g26440 |
| rosa_chinensis | RchiOBHm_Chr6g0293091 |
| rosa_laevigata | RLG00000011972 |
| rosa_multiflora | Rmu_sc0001042.1_g000002 |
| rosa_roxburghii | Rroxscaffold_7G00174420 |
| rosa_rugosa | Rorug06G0232700 |
| rosa_samantha | Rh6AG345500 Rh6BG353300 Rh6CG359700 Rh6DG345600 |
| rosa_wichuraiana | Rw6G030110 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 4286 |
| AccB1I | GGYRCC | 1 cut(s) | 451 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 866, 4514 |
| AccI | GTMKAC | 3 cut(s) | 611, 2679, 4197 |
| AciI | CCGC | 6 cut(s) | 268, 1960, 1970, 2161, 3270, 3965 |
| AcoI | YGGCCR | 2 cut(s) | 358, 1315 |
| AcsI | RAATTY | 7 cut(s) | 156, 1518, 2132, 2739, 3878, 3948, 4784 |
| AcuI | CTGAAG | 9 cut(s) | 666, 1416, 1560, 1624, 1755, 2282, 2610, 3633, 4079 |
| AcvI | CACGTG | 1 cut(s) | 4343 |
| AflII | CTTAAG | 1 cut(s) | 1745 |
| AflIII | ACRYGT | 1 cut(s) | 4342 |
| AgeI | ACCGGT | 1 cut(s) | 2043 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 23, 762 |
| AhlI | ACTAGT | 2 cut(s) | 737, 3683 |
| AjnI | CCWGG | 8 cut(s) | 908, 1530, 1559, 1864, 2032, 2153, 3864, 4135 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2966, 2998 |
| Alw21I | GWGCWC | 4 cut(s) | 1600, 3703, 3833, 3988 |
| Alw26I | GTCTC | 8 cut(s) | 276, 288, 538, 1257, 2658, 3827, 4646, 4673 |
| Alw44I | GTGCAC | 1 cut(s) | 3699 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 1895, 2326, 3503, 4361 |
| Ama87I | CYCGRG | 3 cut(s) | 66, 350, 3146 |
| AoxI | GGCC | 7 cut(s) | 87, 358, 403, 643, 1315, 1527, 3433 |
| ApaI | GGGCCC | 1 cut(s) | 1531 |
| ApaLI | GTGCAC | 1 cut(s) | 3699 |
| ApoI | RAATTY | 7 cut(s) | 156, 1518, 2132, 2739, 3878, 3948, 4784 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1411, 1443, 3146, 3178 |
| AseI | ATTAAT | 1 cut(s) | 1916 |
| AsiGI | ACCGGT | 1 cut(s) | 2043 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 415, 3754 |
| AspLEI | GCGC | 1 cut(s) | 4287 |
| AsuC2I | CCSGG | 4 cut(s) | 91, 139, 3372, 3767 |
| AvaI | CYCGRG | 3 cut(s) | 66, 350, 3146 |
| AvaII | GGWCC | 9 cut(s) | 562, 707, 1030, 1405, 1874, 2414, 2540, 2558, 4130 |
| AxyI | CCTNAGG | 1 cut(s) | 801 |
| BaeGI | GKGCMC | 5 cut(s) | 1531, 1584, 3703, 3714, 4762 |
| BalI | TGGCCA | 2 cut(s) | 360, 1317 |
| BamHI | GGATCC | 2 cut(s) | 2672, 3528 |
| BanI | GGYRCC | 1 cut(s) | 451 |
| BanII | GRGCYC | 5 cut(s) | 599, 1531, 1909, 3833, 4420 |
| BarI | GAAGNNNNNNTAC | 6 cut(s) | 646, 678, 2354, 2386, 4052, 4084 |
| BbrPI | CACGTG | 1 cut(s) | 4343 |
| BbsI | GAAGAC | 3 cut(s) | 1743, 1929, 3510 |
| Bbv12I | GWGCWC | 4 cut(s) | 1600, 3703, 3833, 3988 |
| BbvCI | CCTCAGC | 1 cut(s) | 4189 |
| BceAI | ACGGC | 2 cut(s) | 599, 3241 |
| BciT130I | CCWGG | 8 cut(s) | 910, 1532, 1561, 1866, 2034, 2155, 3866, 4137 |
| BciVI | GTATCC | 3 cut(s) | 525, 1660, 3550 |
| BcnI | CCSGG | 4 cut(s) | 91, 139, 3372, 3767 |
| BcoDI | GTCTC | 8 cut(s) | 276, 288, 538, 1257, 2658, 3827, 4646, 4673 |
| BcuI | ACTAGT | 2 cut(s) | 737, 3683 |
| BfmI | CTRYAG | 5 cut(s) | 210, 631, 1779, 2803, 4770 |
| BfrI | CTTAAG | 1 cut(s) | 1745 |
| BfuI | GTATCC | 3 cut(s) | 525, 1660, 3550 |
| BglII | AGATCT | 2 cut(s) | 851, 878 |
| BlpI | GCTNAGC | 1 cut(s) | 2327 |
| BmcAI | AGTACT | 3 cut(s) | 1393, 3144, 4780 |
| Bme18I | GGWCC | 9 cut(s) | 562, 707, 1030, 1405, 1874, 2414, 2540, 2558, 4130 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 23, 762 |
| BmeT110I | CYCGRG | 3 cut(s) | 66, 350, 3146 |
| BmrI | ACTGGG | 3 cut(s) | 1237, 4706, 4764 |
| BmuI | ACTGGG | 3 cut(s) | 1237, 4706, 4764 |
| BoxI | GACNNNNGTC | 2 cut(s) | 1947, 3174 |
| BpiI | GAAGAC | 3 cut(s) | 1743, 1929, 3510 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 49, 81 |
| BpmI | CTGGAG | 4 cut(s) | 258, 282, 731, 1543 |
| Bpu10I | CCTNAGC | 2 cut(s) | 587, 4189 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2327 |
| BpuEI | CTTGAG | 4 cut(s) | 560, 696, 2551, 3809 |
| BpuMI | CCSGG | 4 cut(s) | 91, 139, 3372, 3767 |
| Bsa29I | ATCGAT | 1 cut(s) | 3238 |
| BsaAI | YACGTR | 2 cut(s) | 3191, 4343 |
| BsaBI | GATNNNNATC | 3 cut(s) | 1317, 1830, 4311 |
| BsaI | GGTCTC | 3 cut(s) | 276, 288, 538 |
| BsaWI | WCCGGW | 2 cut(s) | 766, 2043 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1891, 1921, 3395, 3425 |
| Bse118I | RCCGGY | 1 cut(s) | 2043 |
| Bse21I | CCTNAGG | 1 cut(s) | 801 |
| Bse3DI | GCAATG | 5 cut(s) | 1718, 2500, 2769, 4326, 4479 |
| Bse8I | GATNNNNATC | 3 cut(s) | 1317, 1830, 4311 |
| BseBI | CCWGG | 8 cut(s) | 910, 1532, 1561, 1866, 2034, 2155, 3866, 4137 |
| BseCI | ATCGAT | 1 cut(s) | 3238 |
| BseJI | GATNNNNATC | 3 cut(s) | 1317, 1830, 4311 |
| BseMI | GCAATG | 5 cut(s) | 1718, 2500, 2769, 4326, 4479 |
| BseRI | GAGGAG | 3 cut(s) | 1073, 2075, 2798 |
| BseSI | GKGCMC | 5 cut(s) | 1531, 1584, 3703, 3714, 4762 |
| BseYI | CCCAGC | 2 cut(s) | 3272, 4717 |
| BsgI | GTGCAG | 1 cut(s) | 1955 |
| BshFI | GGCC | 7 cut(s) | 89, 360, 405, 645, 1317, 1529, 3435 |
| BshNI | GGYRCC | 1 cut(s) | 451 |
| BshTI | ACCGGT | 1 cut(s) | 2043 |
| BshVI | ATCGAT | 1 cut(s) | 3238 |
| BsiHKAI | GWGCWC | 4 cut(s) | 1600, 3703, 3833, 3988 |
| BsiHKCI | CYCGRG | 3 cut(s) | 66, 350, 3146 |
| BsiSI | CCGG | 8 cut(s) | 15, 90, 126, 139, 767, 2044, 3371, 3767 |
| BslFI | GGGAC | 5 cut(s) | 186, 2462, 3259, 4257, 4639 |
| BsmAI | GTCTC | 8 cut(s) | 276, 288, 538, 1257, 2658, 3827, 4646, 4673 |
| BsmBI | CGTCTC | 1 cut(s) | 3827 |
| BsmFI | GGGAC | 5 cut(s) | 186, 2462, 3259, 4257, 4639 |
| BsmI | GAATGC | 4 cut(s) | 1156, 4078, 4400, 4530 |
| BsnI | GGCC | 7 cut(s) | 89, 360, 405, 645, 1317, 1529, 3435 |
| Bso31I | GGTCTC | 3 cut(s) | 276, 288, 538 |
| BsoBI | CYCGRG | 3 cut(s) | 66, 350, 3146 |
| Bsp120I | GGGCCC | 1 cut(s) | 1527 |
| Bsp1407I | TGTACA | 1 cut(s) | 4309 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2327 |
| BspACI | CCGC | 6 cut(s) | 268, 1960, 1970, 2161, 3270, 3965 |
| BspANI | GGCC | 7 cut(s) | 89, 360, 405, 645, 1317, 1529, 3435 |
| BspDI | ATCGAT | 1 cut(s) | 3238 |
| BspHI | TCATGA | 1 cut(s) | 3988 |
| BspMAI | CTGCAG | 2 cut(s) | 214, 1783 |
| BspQI | GCTCTTC | 2 cut(s) | 2882, 3028 |
| BspT107I | GGYRCC | 1 cut(s) | 451 |
| BspTI | CTTAAG | 1 cut(s) | 1745 |
| BspTNI | GGTCTC | 3 cut(s) | 276, 288, 538 |
| BsrDI | GCAATG | 5 cut(s) | 1718, 2500, 2769, 4326, 4479 |
| BsrFI | RCCGGY | 1 cut(s) | 2043 |
| BsrGI | TGTACA | 1 cut(s) | 4309 |
| BssAI | RCCGGY | 1 cut(s) | 2043 |
| BssT1I | CCWWGG | 6 cut(s) | 290, 406, 860, 1523, 2116, 4215 |
| Bst2UI | CCWGG | 8 cut(s) | 910, 1532, 1561, 1866, 2034, 2155, 3866, 4137 |
| BstAFI | CTTAAG | 1 cut(s) | 1745 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 1895, 2150, 4325 |
| BstAUI | TGTACA | 1 cut(s) | 4309 |
| BstBAI | YACGTR | 2 cut(s) | 3191, 4343 |
| BstC8I | GCNNGC | 6 cut(s) | 2018, 2146, 2860, 4090, 4289, 4470 |
| BstDSI | CCRYGG | 2 cut(s) | 2536, 3197 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1899 |
| BstHHI | GCGC | 1 cut(s) | 4287 |
| BstMAI | GTCTC | 8 cut(s) | 276, 288, 538, 1257, 2658, 3827, 4646, 4673 |
| BstNI | CCWGG | 8 cut(s) | 910, 1532, 1561, 1866, 2034, 2155, 3866, 4137 |
| BstNSI | RCATGY | 3 cut(s) | 2020, 2148, 4291 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 1947, 3174 |
| BstSFI | CTRYAG | 5 cut(s) | 210, 631, 1779, 2803, 4770 |
| BstSLI | GKGCMC | 5 cut(s) | 1531, 1584, 3703, 3714, 4762 |
| BstSNI | TACGTA | 1 cut(s) | 3191 |
| BstV2I | GAAGAC | 3 cut(s) | 1743, 1929, 3510 |
| BstX2I | RGATCY | 8 cut(s) | 805, 851, 878, 1648, 2672, 2987, 3528, 3724 |
| BstXI | CCANNNNNNTGG | 6 cut(s) | 54, 2004, 2136, 2344, 4012, 4241 |
| BstYI | RGATCY | 8 cut(s) | 805, 851, 878, 1648, 2672, 2987, 3528, 3724 |
| Bsu15I | ATCGAT | 1 cut(s) | 3238 |
| Bsu36I | CCTNAGG | 1 cut(s) | 801 |
| BsuI | GTATCC | 3 cut(s) | 525, 1660, 3550 |
| BsuRI | GGCC | 7 cut(s) | 89, 360, 405, 645, 1317, 1529, 3435 |
| BsuTUI | ATCGAT | 1 cut(s) | 3238 |
| BtgI | CCRYGG | 2 cut(s) | 2536, 3197 |
| BtgZI | GCGATG | 1 cut(s) | 4059 |
| BtsI | GCAGTG | 5 cut(s) | 1943, 2355, 2781, 2875, 3960 |
| Cac8I | GCNNGC | 6 cut(s) | 2018, 2146, 2860, 4090, 4289, 4470 |
| CaiI | CAGNNNCTG | 4 cut(s) | 1895, 2326, 3503, 4361 |
| CciI | TCATGA | 1 cut(s) | 3988 |
| CfoI | GCGC | 1 cut(s) | 4287 |
| Cfr10I | RCCGGY | 1 cut(s) | 2043 |
| ClaI | ATCGAT | 1 cut(s) | 3238 |
| CspAI | ACCGGT | 1 cut(s) | 2043 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2851, 2886 |
| DraI | TTTAAA | 3 cut(s) | 345, 1305, 2430 |
| DriI | GACNNNNNGTC | 2 cut(s) | 23, 762 |
| EaeI | YGGCCR | 2 cut(s) | 358, 1315 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 23, 762 |
| Ecl136II | GAGCTC | 1 cut(s) | 3831 |
| Eco105I | TACGTA | 1 cut(s) | 3191 |
| Eco130I | CCWWGG | 6 cut(s) | 290, 406, 860, 1523, 2116, 4215 |
| Eco24I | GRGCYC | 5 cut(s) | 599, 1531, 1909, 3833, 4420 |
| Eco31I | GGTCTC | 3 cut(s) | 276, 288, 538 |
| Eco32I | GATATC | 1 cut(s) | 628 |
| Eco47I | GGWCC | 9 cut(s) | 562, 707, 1030, 1405, 1874, 2414, 2540, 2558, 4130 |
| Eco53kI | GAGCTC | 1 cut(s) | 3831 |
| Eco57I | CTGAAG | 9 cut(s) | 666, 1416, 1560, 1624, 1755, 2282, 2610, 3633, 4079 |
| Eco72I | CACGTG | 1 cut(s) | 4343 |
| Eco81I | CCTNAGG | 1 cut(s) | 801 |
| Eco88I | CYCGRG | 3 cut(s) | 66, 350, 3146 |
| EcoICRI | GAGCTC | 1 cut(s) | 3831 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1899 |
| EcoO109I | RGGNCCY | 4 cut(s) | 1527, 1528, 2414, 4130 |
| EcoRII | CCWGG | 8 cut(s) | 908, 1530, 1559, 1864, 2032, 2153, 3864, 4135 |
| EcoRV | GATATC | 1 cut(s) | 628 |
| EcoT14I | CCWWGG | 6 cut(s) | 290, 406, 860, 1523, 2116, 4215 |
| EcoT22I | ATGCAT | 2 cut(s) | 4330, 4400 |
| EcoT38I | GRGCYC | 5 cut(s) | 599, 1531, 1909, 3833, 4420 |
| ErhI | CCWWGG | 6 cut(s) | 290, 406, 860, 1523, 2116, 4215 |
| Esp3I | CGTCTC | 1 cut(s) | 3827 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 1728, 1760, 3742, 3774, 4193, 4225 |
| FaqI | GGGAC | 5 cut(s) | 186, 2462, 3259, 4257, 4639 |
| FauI | CCCGC | 1 cut(s) | 2154 |
| FblI | GTMKAC | 3 cut(s) | 611, 2679, 4197 |
| FriOI | GRGCYC | 5 cut(s) | 599, 1531, 1909, 3833, 4420 |
| FspAI | RTGCGCAY | 1 cut(s) | 4286 |
| FspI | TGCGCA | 1 cut(s) | 4286 |
| GlaI | GCGC | 1 cut(s) | 4286 |
| GsaI | CCCAGC | 2 cut(s) | 3276, 4721 |
| GsuI | CTGGAG | 4 cut(s) | 258, 282, 731, 1543 |
| HaeIII | GGCC | 7 cut(s) | 89, 360, 405, 645, 1317, 1529, 3435 |
| HapII | CCGG | 8 cut(s) | 15, 90, 126, 139, 767, 2044, 3371, 3767 |
| HhaI | GCGC | 1 cut(s) | 4287 |
| Hin6I | GCGC | 1 cut(s) | 4285 |
| HinP1I | GCGC | 1 cut(s) | 4285 |
| HincII | GTYRAC | 5 cut(s) | 612, 1181, 1206, 1786, 2287 |
| HindII | GTYRAC | 5 cut(s) | 612, 1181, 1206, 1786, 2287 |
| HindIII | AAGCTT | 3 cut(s) | 1610, 1742, 2272 |
| HpaI | GTTAAC | 2 cut(s) | 1786, 2287 |
| HpaII | CCGG | 8 cut(s) | 15, 90, 126, 139, 767, 2044, 3371, 3767 |
| Hpy99I | CGWCG | 1 cut(s) | 653 |
| HpyCH4IV | ACGT | 4 cut(s) | 2914, 3190, 4342, 4456 |
| HpySE526I | ACGT | 4 cut(s) | 2914, 3190, 4342, 4456 |
| HspAI | GCGC | 1 cut(s) | 4285 |
| KspAI | GTTAAC | 2 cut(s) | 1786, 2287 |
| LguI | GCTCTTC | 2 cut(s) | 2882, 3028 |
| LmnI | GCTCC | 9 cut(s) | 899, 1060, 1089, 1480, 1562, 1750, 1897, 1912, 3584 |
| MaeII | ACGT | 4 cut(s) | 2914, 3190, 4342, 4456 |
| MaeIII | GTNAC | 8 cut(s) | 365, 789, 1534, 1940, 2053, 2339, 3162, 4107 |
| MfeI | CAATTG | 1 cut(s) | 1724 |
| MflI | RGATCY | 8 cut(s) | 805, 851, 878, 1648, 2672, 2987, 3528, 3724 |
| MlsI | TGGCCA | 2 cut(s) | 360, 1317 |
| MluNI | TGGCCA | 2 cut(s) | 360, 1317 |
| MlyI | GAGTC | 9 cut(s) | 289, 1211, 1352, 1637, 2858, 2959, 3170, 3947, 4513 |
| Mox20I | TGGCCA | 2 cut(s) | 360, 1317 |
| Mph1103I | ATGCAT | 2 cut(s) | 4330, 4400 |
| MroXI | GAANNNNTTC | 2 cut(s) | 415, 3754 |
| MscI | TGGCCA | 2 cut(s) | 360, 1317 |
| MslI | CAYNNNNRTG | 5 cut(s) | 52, 2774, 3202, 3993, 4083 |
| Msp20I | TGGCCA | 2 cut(s) | 360, 1317 |
| MspA1I | CMGCKG | 5 cut(s) | 268, 2161, 2326, 3272, 4358 |
| MspCI | CTTAAG | 1 cut(s) | 1745 |
| MspI | CCGG | 8 cut(s) | 15, 90, 126, 139, 767, 2044, 3371, 3767 |
| MunI | CAATTG | 1 cut(s) | 1724 |
| Mva1269I | GAATGC | 4 cut(s) | 1156, 4078, 4400, 4530 |
| MvaI | CCWGG | 8 cut(s) | 910, 1532, 1561, 1866, 2034, 2155, 3866, 4137 |
| NciI | CCSGG | 4 cut(s) | 91, 139, 3372, 3767 |
| NmuCI | GTSAC | 4 cut(s) | 789, 1940, 2339, 3162 |
| NsbI | TGCGCA | 1 cut(s) | 4286 |
| NsiI | ATGCAT | 2 cut(s) | 4330, 4400 |
| NspI | RCATGY | 3 cut(s) | 2020, 2148, 4291 |
| PaeI | GCATGC | 3 cut(s) | 2020, 2148, 4291 |
| PaeR7I | CTCGAG | 2 cut(s) | 66, 350 |
| PagI | TCATGA | 1 cut(s) | 3988 |
| PciSI | GCTCTTC | 2 cut(s) | 2882, 3028 |
| PctI | GAATGC | 4 cut(s) | 1156, 4078, 4400, 4530 |
| PdmI | GAANNNNTTC | 2 cut(s) | 415, 3754 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 866, 4514 |
| PinAI | ACCGGT | 1 cut(s) | 2043 |
| PleI | GAGTC | 9 cut(s) | 289, 1210, 1352, 1636, 2857, 2958, 3169, 3946, 4512 |
| PmaCI | CACGTG | 1 cut(s) | 4343 |
| PmlI | CACGTG | 1 cut(s) | 4343 |
| PpsI | GAGTC | 9 cut(s) | 289, 1210, 1352, 1636, 2857, 2958, 3169, 3946, 4512 |
| Ppu21I | YACGTR | 2 cut(s) | 3191, 4343 |
| PpuMI | RGGWCCY | 2 cut(s) | 2414, 4130 |
| PshAI | GACNNNNGTC | 2 cut(s) | 1947, 3174 |
| PshBI | ATTAAT | 1 cut(s) | 1916 |
| Psp124BI | GAGCTC | 1 cut(s) | 3833 |
| Psp5II | RGGWCCY | 2 cut(s) | 2414, 4130 |
| Psp6I | CCWGG | 8 cut(s) | 908, 1530, 1559, 1864, 2032, 2153, 3864, 4135 |
| PspCI | CACGTG | 1 cut(s) | 4343 |
| PspFI | CCCAGC | 2 cut(s) | 3272, 4717 |
| PspGI | CCWGG | 8 cut(s) | 908, 1530, 1559, 1864, 2032, 2153, 3864, 4135 |
| PspOMI | GGGCCC | 1 cut(s) | 1527 |
| PspPPI | RGGWCCY | 2 cut(s) | 2414, 4130 |
| PspXI | VCTCGAGB | 2 cut(s) | 66, 350 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 3664, 3696 |
| PstI | CTGCAG | 2 cut(s) | 214, 1783 |
| PstNI | CAGNNNCTG | 4 cut(s) | 1895, 2326, 3503, 4361 |
| PsuI | RGATCY | 8 cut(s) | 805, 851, 878, 1648, 2672, 2987, 3528, 3724 |
| PvuII | CAGCTG | 2 cut(s) | 2326, 4358 |
| RseI | CAYNNNNRTG | 5 cut(s) | 52, 2774, 3202, 3993, 4083 |
| SacI | GAGCTC | 1 cut(s) | 3833 |
| SalI | GTCGAC | 1 cut(s) | 610 |
| SapI | GCTCTTC | 2 cut(s) | 2882, 3028 |
| ScaI | AGTACT | 3 cut(s) | 1393, 3144, 4780 |
| SchI | GAGTC | 9 cut(s) | 289, 1211, 1352, 1637, 2858, 2959, 3170, 3947, 4513 |
| SfcI | CTRYAG | 5 cut(s) | 210, 631, 1779, 2803, 4770 |
| Sfr274I | CTCGAG | 2 cut(s) | 66, 350 |
| SinI | GGWCC | 9 cut(s) | 562, 707, 1030, 1405, 1874, 2414, 2540, 2558, 4130 |
| SlaI | CTCGAG | 2 cut(s) | 66, 350 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 52, 2774, 3202, 3993, 4083 |
| SmlI | CTYRAG | 7 cut(s) | 66, 350, 575, 711, 1745, 2566, 3824 |
| SmoI | CTYRAG | 7 cut(s) | 66, 350, 575, 711, 1745, 2566, 3824 |
| SnaBI | TACGTA | 1 cut(s) | 3191 |
| SpeI | ACTAGT | 2 cut(s) | 737, 3683 |
| SphI | GCATGC | 3 cut(s) | 2020, 2148, 4291 |
| SsiI | CCGC | 6 cut(s) | 268, 1960, 1970, 2161, 3270, 3965 |
| SstI | GAGCTC | 1 cut(s) | 3833 |
| StyI | CCWWGG | 6 cut(s) | 290, 406, 860, 1523, 2116, 4215 |
| TaiI | ACGT | 4 cut(s) | 2917, 3193, 4345, 4459 |
| TaqI | TCGA | 9 cut(s) | 50, 67, 351, 611, 648, 2605, 3238, 4099, 4264 |
| TatI | WGTACW | 6 cut(s) | 1391, 2370, 3142, 3640, 4309, 4778 |
| TauI | GCSGC | 2 cut(s) | 1963, 3968 |
| TseFI | GTSAC | 4 cut(s) | 789, 1940, 2339, 3162 |
| Tsp45I | GTSAC | 4 cut(s) | 789, 1940, 2339, 3162 |
| TspGWI | ACGGA | 7 cut(s) | 1887, 2072, 2374, 2553, 2665, 2962, 3214 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 866, 4514 |
| Vha464I | CTTAAG | 1 cut(s) | 1745 |
| VneI | GTGCAC | 1 cut(s) | 3699 |
| VpaK11BI | GGWCC | 9 cut(s) | 562, 707, 1030, 1405, 1874, 2414, 2540, 2558, 4130 |
| VspI | ATTAAT | 1 cut(s) | 1916 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1899 |
| XapI | RAATTY | 7 cut(s) | 156, 1518, 2132, 2739, 3878, 3948, 4784 |
| XbaI | TCTAGA | 2 cut(s) | 2468, 2696 |
| XceI | RCATGY | 3 cut(s) | 2020, 2148, 4291 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 2543, 3416 |
| XhoI | CTCGAG | 2 cut(s) | 66, 350 |
| XmiI | GTMKAC | 3 cut(s) | 611, 2679, 4197 |
| XmnI | GAANNNNTTC | 2 cut(s) | 415, 3754 |
| ZrmI | AGTACT | 3 cut(s) | 1393, 3144, 4780 |
| Zsp2I | ATGCAT | 2 cut(s) | 4330, 4400 |