CW-type Zinc Finger
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G62900 AT3G62900 AT3G62900 |
| fragaria_vesca | FvH4_2g25070 |
| malus_domestica | MD03G1282000.v1.1 MD11G1301800.v1.1 |
| prunus_persica | Prupe.8G255400_v2.0.a1 |
| pyrus_communis | pycom03g22260 pycom03g22270 pycom03g22280 pycom11g26440 |
| rosa_chinensis | RchiOBHm_Chr6g0293091 |
| rosa_laevigata | RLG00000011972 |
| rosa_multiflora | Rmu_sc0001042.1_g000002 |
| rosa_roxburghii | Rroxscaffold_7G00174420 |
| rosa_rugosa | Rorug06G0232700 |
| rosa_samantha | Rh6AG345500 Rh6BG353300 Rh6CG359700 Rh6DG345600 |
| rosa_wichuraiana | Rw6G030110 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 4472 |
| AccB1I | GGYRCC | 1 cut(s) | 466 |
| AccB7I | CCANNNNNTGG | 4 cut(s) | 881, 3701, 3749, 4700 |
| AccBSI | CCGCTC | 1 cut(s) | 1005 |
| AccI | GTMKAC | 3 cut(s) | 626, 2781, 4383 |
| AccII | CGCG | 1 cut(s) | 3301 |
| AccIII | TCCGGA | 1 cut(s) | 814 |
| AcoI | YGGCCR | 2 cut(s) | 373, 1339 |
| AcsI | RAATTY | 7 cut(s) | 171, 1542, 2233, 2841, 4064, 4134, 4481 |
| AcuI | CTGAAG | 9 cut(s) | 681, 1440, 1584, 1648, 1779, 2384, 2712, 3819, 4265 |
| AcvI | CACGTG | 1 cut(s) | 4529 |
| AflII | CTTAAG | 1 cut(s) | 1769 |
| AflIII | ACRYGT | 1 cut(s) | 4528 |
| AgeI | ACCGGT | 1 cut(s) | 2067 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 777, 3732 |
| AhlI | ACTAGT | 2 cut(s) | 752, 3869 |
| AjnI | CCWGG | 9 cut(s) | 923, 1554, 1583, 1888, 2056, 2170, 2254, 4050, 4321 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 3068, 3100 |
| Alw21I | GWGCWC | 4 cut(s) | 1624, 3712, 3889, 4174 |
| Alw26I | GTCTC | 6 cut(s) | 291, 303, 553, 1281, 2760, 4013 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 2428, 3605, 3749, 4547 |
| Ama87I | CYCGRG | 2 cut(s) | 365, 3248 |
| Aor13HI | TCCGGA | 1 cut(s) | 814 |
| AoxI | GGCC | 4 cut(s) | 373, 658, 1339, 3535 |
| ApoI | RAATTY | 7 cut(s) | 171, 1542, 2233, 2841, 4064, 4134, 4481 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1435, 1467 |
| AseI | ATTAAT | 1 cut(s) | 1940 |
| AsiGI | ACCGGT | 1 cut(s) | 2067 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 430, 3940 |
| AspLEI | GCGC | 1 cut(s) | 4473 |
| AsuC2I | CCSGG | 3 cut(s) | 3376, 3474, 3953 |
| AvaI | CYCGRG | 2 cut(s) | 365, 3248 |
| BaeGI | GKGCMC | 2 cut(s) | 1608, 3900 |
| BalI | TGGCCA | 2 cut(s) | 375, 1341 |
| BamHI | GGATCC | 2 cut(s) | 2774, 3630 |
| BanI | GGYRCC | 1 cut(s) | 466 |
| BanII | GRGCYC | 4 cut(s) | 614, 1933, 3712, 4606 |
| BarI | GAAGNNNNNNTAC | 8 cut(s) | 661, 693, 2456, 2488, 3829, 3861, 4238, 4270 |
| BbrPI | CACGTG | 1 cut(s) | 4529 |
| BbsI | GAAGAC | 3 cut(s) | 1209, 1953, 3612 |
| Bbv12I | GWGCWC | 4 cut(s) | 1624, 3712, 3889, 4174 |
| BbvCI | CCTCAGC | 1 cut(s) | 4375 |
| BceAI | ACGGC | 4 cut(s) | 614, 3343, 4665, 4667 |
| BciT130I | CCWGG | 9 cut(s) | 925, 1556, 1585, 1890, 2058, 2172, 2256, 4052, 4323 |
| BciVI | GTATCC | 3 cut(s) | 540, 1684, 3652 |
| BclI | TGATCA | 1 cut(s) | 2218 |
| BcnI | CCSGG | 3 cut(s) | 3376, 3474, 3953 |
| BcoDI | GTCTC | 6 cut(s) | 291, 303, 553, 1281, 2760, 4013 |
| BcuI | ACTAGT | 2 cut(s) | 752, 3869 |
| BfmI | CTRYAG | 5 cut(s) | 225, 646, 1803, 2905, 3186 |
| BfrI | CTTAAG | 1 cut(s) | 1769 |
| BfuI | GTATCC | 3 cut(s) | 540, 1684, 3652 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1268 |
| BglII | AGATCT | 2 cut(s) | 866, 893 |
| BlpI | GCTNAGC | 1 cut(s) | 2429 |
| BmcAI | AGTACT | 2 cut(s) | 1417, 3246 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 777, 3732 |
| BmeT110I | CYCGRG | 2 cut(s) | 365, 3248 |
| BmrI | ACTGGG | 1 cut(s) | 1252 |
| BmuI | ACTGGG | 1 cut(s) | 1252 |
| BoxI | GACNNNNGTC | 2 cut(s) | 1971, 3276 |
| BpiI | GAAGAC | 3 cut(s) | 1209, 1953, 3612 |
| BpmI | CTGGAG | 5 cut(s) | 273, 297, 746, 1567, 3723 |
| Bpu10I | CCTNAGC | 2 cut(s) | 602, 4375 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2429 |
| BpuEI | CTTGAG | 4 cut(s) | 575, 711, 2653, 3995 |
| BpuMI | CCSGG | 3 cut(s) | 3376, 3474, 3953 |
| Bsa29I | ATCGAT | 2 cut(s) | 162, 3340 |
| BsaAI | YACGTR | 2 cut(s) | 3293, 4529 |
| BsaBI | GATNNNNATC | 3 cut(s) | 1341, 1854, 4716 |
| BsaI | GGTCTC | 3 cut(s) | 291, 303, 553 |
| BsaWI | WCCGGW | 4 cut(s) | 781, 814, 1858, 2067 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1915, 1945, 3497, 3527 |
| Bse118I | RCCGGY | 1 cut(s) | 2067 |
| Bse3DI | GCAATG | 6 cut(s) | 1742, 2602, 2871, 4259, 4512, 4665 |
| Bse8I | GATNNNNATC | 3 cut(s) | 1341, 1854, 4716 |
| BseAI | TCCGGA | 1 cut(s) | 814 |
| BseBI | CCWGG | 9 cut(s) | 925, 1556, 1585, 1890, 2058, 2172, 2256, 4052, 4323 |
| BseCI | ATCGAT | 2 cut(s) | 162, 3340 |
| BseJI | GATNNNNATC | 3 cut(s) | 1341, 1854, 4716 |
| BseMI | GCAATG | 6 cut(s) | 1742, 2602, 2871, 4259, 4512, 4665 |
| BseRI | GAGGAG | 4 cut(s) | 1088, 2099, 2900, 3720 |
| BseSI | GKGCMC | 2 cut(s) | 1608, 3900 |
| BseYI | CCCAGC | 1 cut(s) | 56 |
| BsgI | GTGCAG | 1 cut(s) | 1979 |
| Bsh1236I | CGCG | 1 cut(s) | 3301 |
| BshFI | GGCC | 4 cut(s) | 375, 660, 1341, 3537 |
| BshNI | GGYRCC | 1 cut(s) | 466 |
| BshTI | ACCGGT | 1 cut(s) | 2067 |
| BshVI | ATCGAT | 2 cut(s) | 162, 3340 |
| BsiHKAI | GWGCWC | 4 cut(s) | 1624, 3712, 3889, 4174 |
| BsiHKCI | CYCGRG | 2 cut(s) | 365, 3248 |
| BsiSI | CCGG | 7 cut(s) | 782, 815, 1859, 2068, 3375, 3473, 3953 |
| BslFI | GGGAC | 5 cut(s) | 201, 2564, 3361, 3720, 4443 |
| BsmAI | GTCTC | 6 cut(s) | 291, 303, 553, 1281, 2760, 4013 |
| BsmBI | CGTCTC | 1 cut(s) | 4013 |
| BsmFI | GGGAC | 5 cut(s) | 201, 2564, 3361, 3720, 4443 |
| BsmI | GAATGC | 3 cut(s) | 1171, 4264, 4586 |
| BsnI | GGCC | 4 cut(s) | 375, 660, 1341, 3537 |
| Bso31I | GGTCTC | 3 cut(s) | 291, 303, 553 |
| BsoBI | CYCGRG | 2 cut(s) | 365, 3248 |
| Bsp1286I | GDGCHC | 9 cut(s) | 614, 1608, 1624, 1933, 3712, 3889, 3900, 4174, 4606 |
| Bsp13I | TCCGGA | 1 cut(s) | 814 |
| Bsp1407I | TGTACA | 1 cut(s) | 4495 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2429 |
| BspANI | GGCC | 4 cut(s) | 375, 660, 1341, 3537 |
| BspDI | ATCGAT | 2 cut(s) | 162, 3340 |
| BspEI | TCCGGA | 1 cut(s) | 814 |
| BspFNI | CGCG | 1 cut(s) | 3301 |
| BspHI | TCATGA | 1 cut(s) | 4174 |
| BspMAI | CTGCAG | 2 cut(s) | 229, 1807 |
| BspQI | GCTCTTC | 2 cut(s) | 2984, 3130 |
| BspT107I | GGYRCC | 1 cut(s) | 466 |
| BspTI | CTTAAG | 1 cut(s) | 1769 |
| BspTNI | GGTCTC | 3 cut(s) | 291, 303, 553 |
| BsrBI | CCGCTC | 1 cut(s) | 1005 |
| BsrDI | GCAATG | 6 cut(s) | 1742, 2602, 2871, 4259, 4512, 4665 |
| BsrFI | RCCGGY | 1 cut(s) | 2067 |
| BsrGI | TGTACA | 1 cut(s) | 4495 |
| BssAI | RCCGGY | 1 cut(s) | 2067 |
| BssT1I | CCWWGG | 5 cut(s) | 875, 1547, 2140, 2742, 4401 |
| Bst2UI | CCWGG | 9 cut(s) | 925, 1556, 1585, 1890, 2058, 2172, 2256, 4052, 4323 |
| Bst4CI | ACNGT | 8 cut(s) | 356, 650, 668, 1846, 2124, 2906, 4109, 4700 |
| BstAFI | CTTAAG | 1 cut(s) | 1769 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2251 |
| BstAUI | TGTACA | 1 cut(s) | 4495 |
| BstBAI | YACGTR | 2 cut(s) | 3293, 4529 |
| BstC8I | GCNNGC | 7 cut(s) | 2042, 2247, 2962, 3299, 4276, 4475, 4656 |
| BstDSI | CCRYGG | 2 cut(s) | 2638, 3299 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1923 |
| BstFNI | CGCG | 1 cut(s) | 3301 |
| BstHHI | GCGC | 1 cut(s) | 4473 |
| BstMAI | GTCTC | 6 cut(s) | 291, 303, 553, 1281, 2760, 4013 |
| BstNI | CCWGG | 9 cut(s) | 925, 1556, 1585, 1890, 2058, 2172, 2256, 4052, 4323 |
| BstNSI | RCATGY | 3 cut(s) | 2044, 2249, 4477 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 1971, 3276 |
| BstSFI | CTRYAG | 5 cut(s) | 225, 646, 1803, 2905, 3186 |
| BstSLI | GKGCMC | 2 cut(s) | 1608, 3900 |
| BstSNI | TACGTA | 1 cut(s) | 3293 |
| BstUI | CGCG | 1 cut(s) | 3301 |
| BstV2I | GAAGAC | 3 cut(s) | 1209, 1953, 3612 |
| BstX2I | RGATCY | 8 cut(s) | 820, 866, 893, 1672, 2774, 3089, 3630, 3910 |
| BstXI | CCANNNNNNTGG | 5 cut(s) | 2028, 2237, 2446, 4198, 4427 |
| BstYI | RGATCY | 8 cut(s) | 820, 866, 893, 1672, 2774, 3089, 3630, 3910 |
| Bsu15I | ATCGAT | 2 cut(s) | 162, 3340 |
| BsuI | GTATCC | 3 cut(s) | 540, 1684, 3652 |
| BsuRI | GGCC | 4 cut(s) | 375, 660, 1341, 3537 |
| BsuTUI | ATCGAT | 2 cut(s) | 162, 3340 |
| BtgI | CCRYGG | 2 cut(s) | 2638, 3299 |
| BtsI | GCAGTG | 5 cut(s) | 1967, 2457, 2883, 2977, 4146 |
| Cac8I | GCNNGC | 7 cut(s) | 2042, 2247, 2962, 3299, 4276, 4475, 4656 |
| CaiI | CAGNNNCTG | 4 cut(s) | 2428, 3605, 3749, 4547 |
| CciI | TCATGA | 1 cut(s) | 4174 |
| CfoI | GCGC | 1 cut(s) | 4473 |
| Cfr10I | RCCGGY | 1 cut(s) | 2067 |
| Cfr42I | CCGCGG | 1 cut(s) | 3302 |
| ClaI | ATCGAT | 2 cut(s) | 162, 3340 |
| CseI | GACGC | 1 cut(s) | 4520 |
| CspAI | ACCGGT | 1 cut(s) | 2067 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2953, 2988 |
| DraI | TTTAAA | 3 cut(s) | 360, 1329, 2532 |
| DriI | GACNNNNNGTC | 2 cut(s) | 777, 3732 |
| EaeI | YGGCCR | 2 cut(s) | 373, 1339 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 777, 3732 |
| Ecl136II | GAGCTC | 1 cut(s) | 3710 |
| Eco105I | TACGTA | 1 cut(s) | 3293 |
| Eco130I | CCWWGG | 5 cut(s) | 875, 1547, 2140, 2742, 4401 |
| Eco24I | GRGCYC | 4 cut(s) | 614, 1933, 3712, 4606 |
| Eco31I | GGTCTC | 3 cut(s) | 291, 303, 553 |
| Eco32I | GATATC | 1 cut(s) | 643 |
| Eco53kI | GAGCTC | 1 cut(s) | 3710 |
| Eco57I | CTGAAG | 9 cut(s) | 681, 1440, 1584, 1648, 1779, 2384, 2712, 3819, 4265 |
| Eco72I | CACGTG | 1 cut(s) | 4529 |
| Eco88I | CYCGRG | 2 cut(s) | 365, 3248 |
| EcoICRI | GAGCTC | 1 cut(s) | 3710 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1923 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1551, 2516, 4316 |
| EcoRII | CCWGG | 9 cut(s) | 923, 1554, 1583, 1888, 2056, 2170, 2254, 4050, 4321 |
| EcoRV | GATATC | 1 cut(s) | 643 |
| EcoT14I | CCWWGG | 5 cut(s) | 875, 1547, 2140, 2742, 4401 |
| EcoT22I | ATGCAT | 1 cut(s) | 4586 |
| EcoT38I | GRGCYC | 4 cut(s) | 614, 1933, 3712, 4606 |
| ErhI | CCWWGG | 5 cut(s) | 875, 1547, 2140, 2742, 4401 |
| Esp3I | CGTCTC | 1 cut(s) | 4013 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 1752, 1784, 3928, 3960, 4379, 4411 |
| FaqI | GGGAC | 5 cut(s) | 201, 2564, 3361, 3720, 4443 |
| FauI | CCCGC | 3 cut(s) | 998, 2255, 3306 |
| FauNDI | CATATG | 1 cut(s) | 2847 |
| FbaI | TGATCA | 1 cut(s) | 2218 |
| FblI | GTMKAC | 3 cut(s) | 626, 2781, 4383 |
| FriOI | GRGCYC | 4 cut(s) | 614, 1933, 3712, 4606 |
| FspAI | RTGCGCAY | 1 cut(s) | 4472 |
| FspI | TGCGCA | 1 cut(s) | 4472 |
| GlaI | GCGC | 1 cut(s) | 4472 |
| GsaI | CCCAGC | 1 cut(s) | 60 |
| GsuI | CTGGAG | 5 cut(s) | 273, 297, 746, 1567, 3723 |
| HaeIII | GGCC | 4 cut(s) | 375, 660, 1341, 3537 |
| HapII | CCGG | 7 cut(s) | 782, 815, 1859, 2068, 3375, 3473, 3953 |
| HgaI | GACGC | 1 cut(s) | 4520 |
| HhaI | GCGC | 1 cut(s) | 4473 |
| Hin6I | GCGC | 1 cut(s) | 4471 |
| HinP1I | GCGC | 1 cut(s) | 4471 |
| HincII | GTYRAC | 4 cut(s) | 627, 1196, 1810, 2389 |
| HindII | GTYRAC | 4 cut(s) | 627, 1196, 1810, 2389 |
| HindIII | AAGCTT | 3 cut(s) | 1634, 1766, 2374 |
| HpaI | GTTAAC | 2 cut(s) | 1810, 2389 |
| HpaII | CCGG | 7 cut(s) | 782, 815, 1859, 2068, 3375, 3473, 3953 |
| Hpy99I | CGWCG | 1 cut(s) | 146 |
| HpyCH4III | ACNGT | 8 cut(s) | 356, 650, 668, 1846, 2124, 2906, 4109, 4700 |
| HpyCH4IV | ACGT | 5 cut(s) | 144, 3016, 3292, 4528, 4642 |
| HpySE526I | ACGT | 5 cut(s) | 144, 3016, 3292, 4528, 4642 |
| HspAI | GCGC | 1 cut(s) | 4471 |
| Kpn2I | TCCGGA | 1 cut(s) | 814 |
| Ksp22I | TGATCA | 1 cut(s) | 2218 |
| KspAI | GTTAAC | 2 cut(s) | 1810, 2389 |
| KspI | CCGCGG | 1 cut(s) | 3302 |
| LguI | GCTCTTC | 2 cut(s) | 2984, 3130 |
| MaeII | ACGT | 5 cut(s) | 144, 3016, 3292, 4528, 4642 |
| MbiI | CCGCTC | 1 cut(s) | 1005 |
| MfeI | CAATTG | 1 cut(s) | 1748 |
| MflI | RGATCY | 8 cut(s) | 820, 866, 893, 1672, 2774, 3089, 3630, 3910 |
| MhlI | GDGCHC | 9 cut(s) | 614, 1608, 1624, 1933, 3712, 3889, 3900, 4174, 4606 |
| MlsI | TGGCCA | 2 cut(s) | 375, 1341 |
| MluNI | TGGCCA | 2 cut(s) | 375, 1341 |
| MlyI | GAGTC | 9 cut(s) | 304, 1376, 1661, 2960, 3061, 3272, 3721, 4133, 4699 |
| MmeI | TCCRAC | 1 cut(s) | 397 |
| Mox20I | TGGCCA | 2 cut(s) | 375, 1341 |
| Mph1103I | ATGCAT | 1 cut(s) | 4586 |
| MroI | TCCGGA | 1 cut(s) | 814 |
| MroXI | GAANNNNTTC | 2 cut(s) | 430, 3940 |
| MscI | TGGCCA | 2 cut(s) | 375, 1341 |
| MslI | CAYNNNNRTG | 3 cut(s) | 2876, 4179, 4269 |
| Msp20I | TGGCCA | 2 cut(s) | 375, 1341 |
| MspA1I | CMGCKG | 5 cut(s) | 283, 2262, 2428, 3301, 4544 |
| MspCI | CTTAAG | 1 cut(s) | 1769 |
| MspI | CCGG | 7 cut(s) | 782, 815, 1859, 2068, 3375, 3473, 3953 |
| MunI | CAATTG | 1 cut(s) | 1748 |
| Mva1269I | GAATGC | 3 cut(s) | 1171, 4264, 4586 |
| MvaI | CCWGG | 9 cut(s) | 925, 1556, 1585, 1890, 2058, 2172, 2256, 4052, 4323 |
| MvnI | CGCG | 1 cut(s) | 3301 |
| NciI | CCSGG | 3 cut(s) | 3376, 3474, 3953 |
| NdeI | CATATG | 1 cut(s) | 2847 |
| NmuCI | GTSAC | 6 cut(s) | 804, 1964, 2210, 2441, 3264, 3681 |
| NsbI | TGCGCA | 1 cut(s) | 4472 |
| NsiI | ATGCAT | 1 cut(s) | 4586 |
| NspI | RCATGY | 3 cut(s) | 2044, 2249, 4477 |
| PaeI | GCATGC | 3 cut(s) | 2044, 2249, 4477 |
| PaeR7I | CTCGAG | 1 cut(s) | 365 |
| PagI | TCATGA | 1 cut(s) | 4174 |
| PciSI | GCTCTTC | 2 cut(s) | 2984, 3130 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 141, 159, 3736 |
| PctI | GAATGC | 3 cut(s) | 1171, 4264, 4586 |
| PdmI | GAANNNNTTC | 2 cut(s) | 430, 3940 |
| PflMI | CCANNNNNTGG | 4 cut(s) | 881, 3701, 3749, 4700 |
| PinAI | ACCGGT | 1 cut(s) | 2067 |
| PleI | GAGTC | 9 cut(s) | 304, 1376, 1660, 2959, 3060, 3271, 3721, 4132, 4698 |
| PmaCI | CACGTG | 1 cut(s) | 4529 |
| PmlI | CACGTG | 1 cut(s) | 4529 |
| PpsI | GAGTC | 9 cut(s) | 304, 1376, 1660, 2959, 3060, 3271, 3721, 4132, 4698 |
| Ppu21I | YACGTR | 2 cut(s) | 3293, 4529 |
| PpuMI | RGGWCCY | 3 cut(s) | 1551, 2516, 4316 |
| PshAI | GACNNNNGTC | 2 cut(s) | 1971, 3276 |
| PshBI | ATTAAT | 1 cut(s) | 1940 |
| Psp124BI | GAGCTC | 1 cut(s) | 3712 |
| Psp5II | RGGWCCY | 3 cut(s) | 1551, 2516, 4316 |
| Psp6I | CCWGG | 9 cut(s) | 923, 1554, 1583, 1888, 2056, 2170, 2254, 4050, 4321 |
| PspCI | CACGTG | 1 cut(s) | 4529 |
| PspFI | CCCAGC | 1 cut(s) | 56 |
| PspGI | CCWGG | 9 cut(s) | 923, 1554, 1583, 1888, 2056, 2170, 2254, 4050, 4321 |
| PspPPI | RGGWCCY | 3 cut(s) | 1551, 2516, 4316 |
| PspXI | VCTCGAGB | 1 cut(s) | 365 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 3850, 3882 |
| PstI | CTGCAG | 2 cut(s) | 229, 1807 |
| PstNI | CAGNNNCTG | 4 cut(s) | 2428, 3605, 3749, 4547 |
| PsuI | RGATCY | 8 cut(s) | 820, 866, 893, 1672, 2774, 3089, 3630, 3910 |
| PvuII | CAGCTG | 2 cut(s) | 2428, 4544 |
| RseI | CAYNNNNRTG | 3 cut(s) | 2876, 4179, 4269 |
| SacI | GAGCTC | 1 cut(s) | 3712 |
| SacII | CCGCGG | 1 cut(s) | 3302 |
| SalI | GTCGAC | 1 cut(s) | 625 |
| SapI | GCTCTTC | 2 cut(s) | 2984, 3130 |
| ScaI | AGTACT | 2 cut(s) | 1417, 3246 |
| SchI | GAGTC | 9 cut(s) | 304, 1376, 1661, 2960, 3061, 3272, 3721, 4133, 4699 |
| SduI | GDGCHC | 9 cut(s) | 614, 1608, 1624, 1933, 3712, 3889, 3900, 4174, 4606 |
| SfcI | CTRYAG | 5 cut(s) | 225, 646, 1803, 2905, 3186 |
| Sfr274I | CTCGAG | 1 cut(s) | 365 |
| Sfr303I | CCGCGG | 1 cut(s) | 3302 |
| SgrBI | CCGCGG | 1 cut(s) | 3302 |
| SlaI | CTCGAG | 1 cut(s) | 365 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 2876, 4179, 4269 |
| SmlI | CTYRAG | 6 cut(s) | 365, 590, 726, 1769, 2668, 4010 |
| SmoI | CTYRAG | 6 cut(s) | 365, 590, 726, 1769, 2668, 4010 |
| SnaBI | TACGTA | 1 cut(s) | 3293 |
| SpeI | ACTAGT | 2 cut(s) | 752, 3869 |
| SphI | GCATGC | 3 cut(s) | 2044, 2249, 4477 |
| SstI | GAGCTC | 1 cut(s) | 3712 |
| StyI | CCWWGG | 5 cut(s) | 875, 1547, 2140, 2742, 4401 |
| TaaI | ACNGT | 8 cut(s) | 356, 650, 668, 1846, 2124, 2906, 4109, 4700 |
| TaiI | ACGT | 5 cut(s) | 147, 3019, 3295, 4531, 4645 |
| TaqI | TCGA | 9 cut(s) | 135, 162, 366, 626, 2707, 3340, 3652, 4285, 4450 |
| TatI | WGTACW | 5 cut(s) | 1415, 2472, 3244, 3826, 4495 |
| TauI | GCSGC | 2 cut(s) | 1987, 4154 |
| TseFI | GTSAC | 6 cut(s) | 804, 1964, 2210, 2441, 3264, 3681 |
| Tsp45I | GTSAC | 6 cut(s) | 804, 1964, 2210, 2441, 3264, 3681 |
| TspGWI | ACGGA | 5 cut(s) | 1911, 2476, 2655, 2767, 3064 |
| Van91I | CCANNNNNTGG | 4 cut(s) | 881, 3701, 3749, 4700 |
| Vha464I | CTTAAG | 1 cut(s) | 1769 |
| VspI | ATTAAT | 1 cut(s) | 1940 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1923 |
| XapI | RAATTY | 7 cut(s) | 171, 1542, 2233, 2841, 4064, 4134, 4481 |
| XbaI | TCTAGA | 2 cut(s) | 2570, 2798 |
| XceI | RCATGY | 3 cut(s) | 2044, 2249, 4477 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 2645, 3518 |
| XhoI | CTCGAG | 1 cut(s) | 365 |
| XmiI | GTMKAC | 3 cut(s) | 626, 2781, 4383 |
| XmnI | GAANNNNTTC | 2 cut(s) | 430, 3940 |
| ZrmI | AGTACT | 2 cut(s) | 1417, 3246 |
| Zsp2I | ATGCAT | 1 cut(s) | 4586 |