pycom11g27470

Bromodomain and WD repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0003305
Physical Location & Seq
Forward (+)
29731194 .. 29735244
4051 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1263 bp
ATGGTGCAGAAGATGAACAACAAAAAGAAGCTACGGGGGCACCGTAATGCTGTTTACTGTGCCATTTTAGATCGGTCTGGGAGATATGTTATCACGGGTGCAGATGATCGGCTTGTGAAGATTTGGTCAATGGAAACTGCACTTTGCTTGTCTAGCTGTCGTGGACATGAAGGAGACATTACTGACTTGGCTGTAAGTTCGAACAATGCTTTGGTGGCATCTGCTTCAAATGACTTTTCCATTCGAGTTTGGCGTTTGCCAGATGGATTTCCAATTTCAGTTCTTCAGGGGCATACTGGAGCTGTGACTGCTATTGCATTTAGTCCCAGGCTTAGTGCTGTTTACCAACTTTTATCGTCATCAGATGATGGGACTTGTCGAATATGGGATGCTAGGTCCTCCCAGTGCCCGCTGCGAGTATACATGCCAAAACCTTCAGAGACTTCAACTGGGAAGAGCAATGCTTTTGCAATCACTGGATCCTCCTCGAGCAATGGTCCACAGAGCCATCAAATACTTTGTTGTGCTTACAACGCCAATGGAACTGTTTTTGTCACGGGTAGCTCTGACACTTTTGCAAGGGTCTGGAATGCTTTAAAATCTAATACTGATAACTCAGAACAACCAATACATGAGATGGATGTACTGGCTGGCCACGAGAATGACGTGAATTATGTTCAGTTCAGTGGTTGTGTCATTCCTTCAAAGTCTTCATTTTCTGACTCTGTCAAGGAGGAGACTAATGGGAAGTTCAAAAATTCCTGGTTTTGTCACAACAACATAGTTACCTGCTCTCGTGATGGCAGTGCCATTATATGGGTTCCAGGATCACACAAATTCCATGGGAAAGTTGGACGTTGGACACGTGCGTATCATCTAAAAGTTCCACCTCCCCCACTGCCTCCTCAGCCTCCTCGAGGAGGCCCACGTCAGAGATTTCTTCCCACCCCTCGTGGTGTTAACATGATTGTGTGGAGCCTGGATAACCGCTTCGTGCTTGCAGCTATCATGGATTGCAGAATTTGTGTTTGGAATGCTGTTGATGGTAGCTTAGTACATTCTTTAACCGGTCACACTGCATCGTCTTATGTTTTGGATGTGCATCCCTTCAATCCTCGAATTGCTATGAGTGCTGGGTATGATGGGCAAACAATAGTTTGGGATATATGGGAGGGCGTGCCTATTAAGATATACGAACTTGGACATGTAAAATTGGTTGATGGGAAGTTTTCGGGATGGTACATCAATAGTACTTTCAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001932 GO:0001934 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0006606 GO:0006810 GO:0006886 GO:0006913 GO:0006996 GO:0007010 GO:0007088 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007169 GO:0007346 GO:0008104 GO:0008150 GO:0008284 GO:0008286 GO:0008360 GO:0009719 GO:0009725 GO:0009889 GO:0009891 GO:0009893 GO:0009966 GO:0009967 GO:0009968 GO:0009987 GO:0010033 GO:0010243 GO:0010468 GO:0010556 GO:0010557 GO:0010562 GO:0010564 GO:0010604 GO:0010628 GO:0010638 GO:0010646 GO:0010647 GO:0010648 GO:0010799 GO:0010800 GO:0010941 GO:0015031 GO:0015833 GO:0016043 GO:0017038 GO:0019219 GO:0019220 GO:0019222 GO:0022603 GO:0022604 GO:0023051 GO:0023052 GO:0023056 GO:0023057 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031399 GO:0031401 GO:0032268 GO:0032270 GO:0032868 GO:0032869 GO:0032870 GO:0033036 GO:0033043 GO:0033135 GO:0033138 GO:0033365 GO:0034504 GO:0034613 GO:0040008 GO:0042127 GO:0042221 GO:0042325 GO:0042327 GO:0042393 GO:0042886 GO:0042981 GO:0043066 GO:0043067 GO:0043069 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043434 GO:0043567 GO:0043568 GO:0044424 GO:0044464 GO:0045184 GO:0045787 GO:0045840 GO:0045893 GO:0045931 GO:0045935 GO:0045937 GO:0045944 GO:0046907 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051128 GO:0051130 GO:0051169 GO:0051170 GO:0051171 GO:0051173 GO:0051174 GO:0051179 GO:0051234 GO:0051246 GO:0051247 GO:0051252 GO:0051254 GO:0051641 GO:0051649 GO:0051716 GO:0051726 GO:0051781 GO:0051783 GO:0051785 GO:0060255 GO:0060548 GO:0065007 GO:0065008 GO:0070577 GO:0070727 GO:0070887 GO:0071310 GO:0071375 GO:0071417 GO:0071495 GO:0071702 GO:0071705 GO:0071840 GO:0072594 GO:0080090 GO:0090068 GO:0140030 GO:0140033 GO:1901652 GO:1901653 GO:1901698 GO:1901699 GO:1901700 GO:1901701 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141 GO:2001233 GO:2001234 GO:2001236 GO:2001237
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Auxin_resp Bromodomain WD40

Protein Analysis

421

Amino Acids

46.24

Weight (kDa)

8.95

Isoelectric Point (pI)

32.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_WDR5 PF25175 3 - 137 7.1e-28 WDR5 beta-propeller domain
Beta-prop_THOC3 PF25174 3 - 110 1.7e-20 THOC3 beta-propeller domain
WD40_CDC20-Fz PF24807 3 - 136 5.6e-16 CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st PF25173 3 - 140 1.2e-24 WDR3 first beta-propeller domain
WD40_Prp19 PF24814 7 - 87 5.5e-11 Prp19 WD40 domain
WD40 PF00400 8 - 43 2.1e-06 WD domain, G-beta repeat
Beta-prop_WDR3_2nd PF25172 8 - 85 8.8e-11 WDR3 second beta-propeller domain
WD40_Gbeta PF25391 9 - 141 1.2e-14 G protein beta WD-40 repeat protein
Beta-prop_WDR36-Utp21_2nd PF25168 12 - 135 1.9e-12 WDR36/Utp21 second beta-propeller domain
WD40_MABP1-WDR62_2nd PF24782 14 - 129 2.2e-08 MABP1/WDR62 second WD40 domain
Beta-prop_SCAP PF24017 26 - 132 3.5e-10 SCAP Beta-propeller
Beta-prop_TEP1_2nd PF25047 31 - 139 3.6e-11 TEP-1 second beta-propeller
Beta-prop_CAF1B_HIR1 PF24105 45 - 142 4.9e-10 CAF1B/HIR1 beta-propeller domain
WD40 PF00400 49 - 84 5.8e-08 WD domain, G-beta repeat
EIF3I PF24805 54 - 137 3.2e-07 EIF3I
WD40_WDHD1_1st PF24817 59 - 148 8.9e-14 WDHD1 first WD40 domain
Beta-prop_THOC3 PF25174 73 - 139 2.8e-10 THOC3 beta-propeller domain
WD40_Prp19 PF24814 79 - 137 1.6e-06 Prp19 WD40 domain
WD40 PF00400 91 - 130 1.1e-08 WD domain, G-beta repeat
Beta-prop_THOC3 PF25174 169 - 229 7.4e-06 THOC3 beta-propeller domain
Beta-prop_WDR5 PF25175 317 - 398 3e-09 WDR5 beta-propeller domain
Beta-prop_WDR3_1st PF25173 319 - 393 5.7e-06 WDR3 first beta-propeller domain
Beta-prop_THOC3 PF25174 320 - 398 5.9e-08 THOC3 beta-propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 915
Acc36I ACCTGC 1 cut(s) 797
AccB1I GGYRCC 1 cut(s) 39
AccB7I CCANNNNNTGG 1 cut(s) 816
AccI GTMKAC 1 cut(s) 420
AciI CCGC 2 cut(s) 410, 988
AclWI GGATC 3 cut(s) 474, 487, 835
AcoI YGGCCR 1 cut(s) 652
AcsI RAATTY 3 cut(s) 757, 836, 1020
AcuI CTGAAG 2 cut(s) 269, 420
AcvI CACGTG 1 cut(s) 866
AfaI GTAC 4 cut(s) 645, 1056, 1241, 1252
AfiI CCNNNNNNNGG 3 cut(s) 816, 917, 920
AflIII ACRYGT 2 cut(s) 863, 1204
AgeI ACCGGT 1 cut(s) 1067
AgsI TTSAA 5 cut(s) 228, 447, 705, 754, 1111
AjiI CACGTC 2 cut(s) 667, 929
AjnI CCWGG 4 cut(s) 326, 761, 823, 978
AjuI GAANNNNNNNTTGG 4 cut(s) 194, 226, 1012, 1044
AluBI AGCT 6 cut(s) 31, 156, 302, 564, 1004, 1050
AluI AGCT 6 cut(s) 31, 156, 302, 564, 1004, 1050
Alw26I GTCTC 3 cut(s) 168, 434, 731
AlwI GGATC 3 cut(s) 474, 487, 835
Ama87I CYCGRG 2 cut(s) 487, 915
AoxI GGCC 2 cut(s) 652, 922
ApeKI GCWGC 2 cut(s) 412, 1001
ApoI RAATTY 3 cut(s) 757, 836, 1020
AsiGI ACCGGT 1 cut(s) 1067
AspS9I GGNCC 3 cut(s) 396, 497, 923
AsuII TTCGAA 1 cut(s) 200
AvaI CYCGRG 2 cut(s) 487, 915
AvaII GGWCC 2 cut(s) 396, 497
BaeGI GKGCMC 2 cut(s) 42, 410
BaeI ACNNNNGTAYC 2 cut(s) 854, 887
BalI TGGCCA 1 cut(s) 654
BamHI GGATCC 1 cut(s) 479
BanI GGYRCC 1 cut(s) 39
BauI CACGAG 3 cut(s) 656, 795, 951
BbrPI CACGTG 1 cut(s) 866
BbsI GAAGAC 1 cut(s) 702
BbvCI CCTCAGC 1 cut(s) 906
BbvI GCAGC 2 cut(s) 399, 1013
BccI CCATC 9 cut(s) 257, 362, 516, 631, 794, 1037, 1136, 1214, 1230
BciT130I CCWGG 4 cut(s) 328, 763, 825, 980
BcoDI GTCTC 3 cut(s) 168, 434, 731
BfaI CTAG 2 cut(s) 153, 393
BfuAI ACCTGC 1 cut(s) 797
BisI GCNGC 2 cut(s) 413, 1002
BlsI GCNGC 2 cut(s) 414, 1003
BmcAI AGTACT 1 cut(s) 1252
Bme1390I CCNGG 4 cut(s) 328, 763, 825, 980
Bme18I GGWCC 2 cut(s) 396, 497
BmeT110I CYCGRG 2 cut(s) 487, 915
BmgBI CACGTC 2 cut(s) 667, 929
BmgT120I GGNCC 3 cut(s) 396, 497, 923
BmiI GGNNCC 4 cut(s) 41, 481, 822, 977
BmrFI CCNGG 4 cut(s) 328, 763, 825, 980
BmrI ACTGGG 2 cut(s) 397, 459
BmsI GCATC 4 cut(s) 227, 379, 1088, 1111
BmuI ACTGGG 2 cut(s) 397, 459
BpiI GAAGAC 1 cut(s) 702
BpmI CTGGAG 1 cut(s) 318
Bpu10I CCTNAGC 1 cut(s) 906
Bpu14I TTCGAA 1 cut(s) 200
BsaAI YACGTR 1 cut(s) 866
BsaBI GATNNNNATC 1 cut(s) 1101
BsaJI CCNNGG 2 cut(s) 326, 841
BsaWI WCCGGW 1 cut(s) 1067
Bsc4I CCNNNNNNNGG 3 cut(s) 816, 917, 920
Bse118I RCCGGY 1 cut(s) 1067
Bse1I ACTGG 5 cut(s) 301, 403, 454, 481, 651
Bse3DI GCAATG 2 cut(s) 466, 499
Bse8I GATNNNNATC 1 cut(s) 1101
BseBI CCWGG 4 cut(s) 328, 763, 825, 980
BseDI CCNNGG 2 cut(s) 326, 841
BseGI GGATG 5 cut(s) 394, 646, 1102, 1102, 1241
BseJI GATNNNNATC 1 cut(s) 1101
BseLI CCNNNNNNNGG 3 cut(s) 816, 917, 920
BseMI GCAATG 2 cut(s) 466, 499
BseMII CTCAG 2 cut(s) 630, 920
BseNI ACTGG 5 cut(s) 301, 403, 454, 481, 651
BseRI GAGGAG 5 cut(s) 475, 749, 894, 903, 933
BseSI GKGCMC 2 cut(s) 42, 410
BseXI GCAGC 2 cut(s) 399, 1013
BseYI CCCAGC 1 cut(s) 1133
BsgI GTGCAG 3 cut(s) 26, 120, 123
BshFI GGCC 2 cut(s) 654, 924
BshNI GGYRCC 1 cut(s) 39
BshTI ACCGGT 1 cut(s) 1067
BsiHKCI CYCGRG 2 cut(s) 487, 915
BsiSI CCGG 1 cut(s) 1068
BslFI GGGAC 2 cut(s) 309, 385
BslI CCNNNNNNNGG 3 cut(s) 816, 917, 920
BsmAI GTCTC 3 cut(s) 168, 434, 731
BsmFI GGGAC 2 cut(s) 309, 385
BsmI GAATGC 2 cut(s) 595, 1039
BsnI GGCC 2 cut(s) 654, 924
BsoBI CYCGRG 2 cut(s) 487, 915
Bsp119I TTCGAA 1 cut(s) 200
Bsp1286I GDGCHC 2 cut(s) 42, 410
Bsp143I GATC 4 cut(s) 70, 106, 479, 827
Bsp19I CCATGG 1 cut(s) 841
BspACI CCGC 2 cut(s) 410, 988
BspANI GGCC 2 cut(s) 654, 924
BspCNI CTCAG 2 cut(s) 629, 919
BspLI GGNNCC 4 cut(s) 41, 481, 822, 977
BspMI ACCTGC 1 cut(s) 797
BspPI GGATC 3 cut(s) 474, 487, 835
BspQI GCTCTTC 1 cut(s) 449
BspT104I TTCGAA 1 cut(s) 200
BspT107I GGYRCC 1 cut(s) 39
BsrDI GCAATG 2 cut(s) 466, 499
BsrFI RCCGGY 1 cut(s) 1067
BsrI ACTGG 5 cut(s) 301, 403, 454, 481, 651
BssAI RCCGGY 1 cut(s) 1067
BssECI CCNNGG 2 cut(s) 326, 841
BssMI GATC 4 cut(s) 70, 106, 479, 827
BssNAI GTATAC 1 cut(s) 421
BssSI CACGAG 3 cut(s) 656, 795, 951
BssT1I CCWWGG 1 cut(s) 841
Bst1107I GTATAC 1 cut(s) 421
Bst2BI CACGAG 3 cut(s) 656, 795, 951
Bst2UI CCWGG 4 cut(s) 328, 763, 825, 980
Bst4CI ACNGT 3 cut(s) 44, 59, 547
Bst6I CTCTTC 1 cut(s) 449
BstBAI YACGTR 1 cut(s) 866
BstBI TTCGAA 1 cut(s) 200
BstC8I GCNNGC 4 cut(s) 410, 652, 999, 1178
BstDEI CTNAG 4 cut(s) 332, 616, 906, 1051
BstDSI CCRYGG 1 cut(s) 841
BstENI CCTNNNNNAGG 2 cut(s) 915, 918
BstF5I GGATG 5 cut(s) 394, 646, 1102, 1102, 1241
BstKTI GATC 4 cut(s) 73, 109, 482, 830
BstMAI GTCTC 3 cut(s) 168, 434, 731
BstMBI GATC 4 cut(s) 70, 106, 479, 827
BstMWI GCNNNNNNNGC 7 cut(s) 37, 153, 215, 308, 533, 907, 1130
BstNI CCWGG 4 cut(s) 328, 763, 825, 980
BstNSI RCATGY 2 cut(s) 427, 1208
BstSCI CCNGG 4 cut(s) 326, 761, 823, 978
BstSLI GKGCMC 2 cut(s) 42, 410
BstV1I GCAGC 2 cut(s) 399, 1013
BstV2I GAAGAC 1 cut(s) 702
BstX2I RGATCY 1 cut(s) 479
BstYI RGATCY 1 cut(s) 479
BstZ17I GTATAC 1 cut(s) 421
BsuRI GGCC 2 cut(s) 654, 924
BtgI CCRYGG 1 cut(s) 841
BtrI CACGTC 2 cut(s) 667, 929
BtsCI GGATG 5 cut(s) 394, 646, 1102, 1102, 1241
BtsI GCAGTG 3 cut(s) 811, 896, 1074
BtsIMutI CAGTG 6 cut(s) 410, 474, 691, 811, 896, 1074
BveI ACCTGC 1 cut(s) 797
Cac8I GCNNGC 4 cut(s) 410, 652, 999, 1178
Cfr10I RCCGGY 1 cut(s) 1067
Cfr13I GGNCC 3 cut(s) 396, 497, 923
Csp6I GTAC 4 cut(s) 644, 1055, 1240, 1251
CspAI ACCGGT 1 cut(s) 1067
CviAII CATG 7 cut(s) 167, 424, 632, 842, 964, 1009, 1205
CviQI GTAC 4 cut(s) 644, 1055, 1240, 1251
DdeI CTNAG 4 cut(s) 332, 616, 906, 1051
DpnI GATC 4 cut(s) 72, 108, 481, 829
DpnII GATC 4 cut(s) 70, 106, 479, 827
DraI TTTAAA 1 cut(s) 597
EaeI YGGCCR 1 cut(s) 652
Eam1104I CTCTTC 1 cut(s) 449
EarI CTCTTC 1 cut(s) 449
Eco130I CCWWGG 1 cut(s) 841
Eco47I GGWCC 2 cut(s) 396, 497
Eco57I CTGAAG 2 cut(s) 269, 420
Eco72I CACGTG 1 cut(s) 866
Eco88I CYCGRG 2 cut(s) 487, 915
EcoNI CCTNNNNNAGG 2 cut(s) 915, 918
EcoO109I RGGNCCY 1 cut(s) 396
EcoRII CCWGG 4 cut(s) 326, 761, 823, 978
EcoT14I CCWWGG 1 cut(s) 841
ErhI CCWWGG 1 cut(s) 841
FaeI CATG 7 cut(s) 170, 427, 635, 845, 967, 1012, 1208
FaqI GGGAC 2 cut(s) 309, 385
FatI CATG 7 cut(s) 166, 423, 631, 841, 963, 1008, 1204
FauI CCCGC 1 cut(s) 417
FblI GTMKAC 1 cut(s) 420
Fnu4HI GCNGC 2 cut(s) 413, 1002
FokI GGATG 5 cut(s) 401, 653, 1089, 1109, 1248
Fsp4HI GCNGC 2 cut(s) 413, 1002
FspBI CTAG 2 cut(s) 153, 393
GluI GCNGC 2 cut(s) 413, 1002
GsaI CCCAGC 1 cut(s) 1137
GsuI CTGGAG 1 cut(s) 318
HaeIII GGCC 2 cut(s) 654, 924
HapII CCGG 1 cut(s) 1068
Hin1II CATG 7 cut(s) 170, 427, 635, 845, 967, 1012, 1208
HincII GTYRAC 1 cut(s) 961
HindII GTYRAC 1 cut(s) 961
HinfI GANTC 1 cut(s) 722
HpaI GTTAAC 1 cut(s) 961
HpaII CCGG 1 cut(s) 1068
Hpy166II GTNNAC 6 cut(s) 55, 164, 343, 421, 500, 961
Hpy188I TCNGA 7 cut(s) 364, 439, 568, 619, 721, 933, 1259
Hpy188III TCNNGA 3 cut(s) 586, 797, 1233
Hpy8I GTNNAC 6 cut(s) 55, 164, 343, 421, 500, 961
HpyAV CCTTC 4 cut(s) 164, 444, 711, 1117
HpyCH4III ACNGT 3 cut(s) 44, 59, 547
HpyCH4IV ACGT 4 cut(s) 666, 856, 865, 928
HpyF10VI GCNNNNNNNGC 7 cut(s) 37, 153, 215, 308, 533, 907, 1130
HpyF3I CTNAG 4 cut(s) 332, 616, 906, 1051
HpySE526I ACGT 4 cut(s) 666, 856, 865, 928
Hsp92II CATG 7 cut(s) 170, 427, 635, 845, 967, 1012, 1208
KspAI GTTAAC 1 cut(s) 961
Kzo9I GATC 4 cut(s) 70, 106, 479, 827
LguI GCTCTTC 1 cut(s) 449
LmnI GCTCC 2 cut(s) 299, 975
Lsp1109I GCAGC 2 cut(s) 399, 1013
LweI GCATC 4 cut(s) 227, 379, 1088, 1111
MaeI CTAG 2 cut(s) 153, 393
MaeII ACGT 4 cut(s) 666, 856, 865, 928
MaeIII GTNAC 5 cut(s) 304, 553, 770, 784, 1070
MalI GATC 4 cut(s) 72, 108, 481, 829
MboI GATC 4 cut(s) 70, 106, 479, 827
MboII GAAGA 6 cut(s) 22, 130, 275, 466, 702, 932
MflI RGATCY 1 cut(s) 479
MhlI GDGCHC 2 cut(s) 42, 410
MlsI TGGCCA 1 cut(s) 654
MluCI AATT 7 cut(s) 273, 670, 757, 836, 1020, 1119, 1211
MluNI TGGCCA 1 cut(s) 654
MlyI GAGTC 1 cut(s) 716
MmeI TCCRAC 2 cut(s) 832, 839
Mox20I TGGCCA 1 cut(s) 654
MscI TGGCCA 1 cut(s) 654
MseI TTAA 4 cut(s) 596, 960, 1064, 1185
MslI CAYNNNNRTG 3 cut(s) 45, 660, 968
Msp20I TGGCCA 1 cut(s) 654
MspA1I CMGCKG 1 cut(s) 412
MspI CCGG 1 cut(s) 1068
MspR9I CCNGG 4 cut(s) 328, 763, 825, 980
Mva1269I GAATGC 2 cut(s) 595, 1039
MvaI CCWGG 4 cut(s) 328, 763, 825, 980
MwoI GCNNNNNNNGC 7 cut(s) 37, 153, 215, 308, 533, 907, 1130
NcoI CCATGG 1 cut(s) 841
NdeII GATC 4 cut(s) 70, 106, 479, 827
NlaIII CATG 7 cut(s) 170, 427, 635, 845, 967, 1012, 1208
NlaIV GGNNCC 4 cut(s) 41, 481, 822, 977
NmuCI GTSAC 4 cut(s) 304, 553, 770, 1070
NspI RCATGY 2 cut(s) 427, 1208
NspV TTCGAA 1 cut(s) 200
PaeR7I CTCGAG 2 cut(s) 487, 915
PciI ACATGT 1 cut(s) 1204
PciSI GCTCTTC 1 cut(s) 449
PcsI WCGNNNNNNNCGW 4 cut(s) 40, 250, 663, 862
PctI GAATGC 2 cut(s) 595, 1039
PflFI GACNNNGTC 1 cut(s) 725
PflMI CCANNNNNTGG 1 cut(s) 816
PfoI TCCNGGA 1 cut(s) 823
PinAI ACCGGT 1 cut(s) 1067
PkrI GCNGC 2 cut(s) 414, 1003
PleI GAGTC 1 cut(s) 716
PmaCI CACGTG 1 cut(s) 866
PmlI CACGTG 1 cut(s) 866
PpsI GAGTC 1 cut(s) 716
Ppu21I YACGTR 1 cut(s) 866
PpuMI RGGWCCY 1 cut(s) 396
PscI ACATGT 1 cut(s) 1204
Psp5II RGGWCCY 1 cut(s) 396
Psp6I CCWGG 4 cut(s) 326, 761, 823, 978
PspCI CACGTG 1 cut(s) 866
PspFI CCCAGC 1 cut(s) 1133
PspGI CCWGG 4 cut(s) 326, 761, 823, 978
PspN4I GGNNCC 4 cut(s) 41, 481, 822, 977
PspPI GGNCC 3 cut(s) 396, 497, 923
PspPPI RGGWCCY 1 cut(s) 396
PspXI VCTCGAGB 2 cut(s) 487, 915
PsrI GAACNNNNNNTAC 2 cut(s) 612, 644
PsuI RGATCY 1 cut(s) 479
PsyI GACNNNGTC 1 cut(s) 725
RsaI GTAC 4 cut(s) 645, 1056, 1241, 1252
RsaNI GTAC 4 cut(s) 644, 1055, 1240, 1251
RseI CAYNNNNRTG 3 cut(s) 45, 660, 968
SapI GCTCTTC 1 cut(s) 449
SaqAI TTAA 4 cut(s) 596, 960, 1064, 1185
SatI GCNGC 2 cut(s) 413, 1002
Sau3AI GATC 4 cut(s) 70, 106, 479, 827
Sau96I GGNCC 3 cut(s) 396, 497, 923
ScaI AGTACT 1 cut(s) 1252
SchI GAGTC 1 cut(s) 716
ScrFI CCNGG 4 cut(s) 328, 763, 825, 980
SduI GDGCHC 2 cut(s) 42, 410
SfaNI GCATC 4 cut(s) 227, 379, 1088, 1111
Sfr274I CTCGAG 2 cut(s) 487, 915
SfuI TTCGAA 1 cut(s) 200
SinI GGWCC 2 cut(s) 396, 497
SlaI CTCGAG 2 cut(s) 487, 915
SmiMI CAYNNNNRTG 3 cut(s) 45, 660, 968
SmlI CTYRAG 2 cut(s) 487, 915
SmoI CTYRAG 2 cut(s) 487, 915
Sse9I AATT 7 cut(s) 273, 670, 757, 836, 1020, 1119, 1211
SsiI CCGC 2 cut(s) 410, 988
SspMI CTAG 2 cut(s) 153, 393
StyD4I CCNGG 4 cut(s) 326, 761, 823, 978
StyI CCWWGG 1 cut(s) 841
TaaI ACNGT 3 cut(s) 44, 59, 547
TaiI ACGT 4 cut(s) 669, 859, 868, 931
TaqI TCGA 6 cut(s) 200, 244, 379, 488, 916, 1117
TaqII GACCGA 1 cut(s) 63
TasI AATT 7 cut(s) 273, 670, 757, 836, 1020, 1119, 1211
TatI WGTACW 3 cut(s) 643, 1054, 1250
Tru1I TTAA 4 cut(s) 596, 960, 1064, 1185
Tru9I TTAA 4 cut(s) 596, 960, 1064, 1185
TscAI CASTG 6 cut(s) 410, 481, 691, 811, 903, 1081
TseFI GTSAC 4 cut(s) 304, 553, 770, 1070
TseI GCWGC 2 cut(s) 412, 1001
Tsp45I GTSAC 4 cut(s) 304, 553, 770, 1070
TspDTI ATGAA 3 cut(s) 29, 183, 702
TspRI CASTG 6 cut(s) 410, 481, 691, 811, 903, 1081
Tth111I GACNNNGTC 1 cut(s) 725
Van91I CCANNNNNTGG 1 cut(s) 816
VpaK11BI GGWCC 2 cut(s) 396, 497
XagI CCTNNNNNAGG 2 cut(s) 915, 918
XapI RAATTY 3 cut(s) 757, 836, 1020
XceI RCATGY 2 cut(s) 427, 1208
XcmI CCANNNNNNNNNTGG 1 cut(s) 848
XhoI CTCGAG 2 cut(s) 487, 915
XmiI GTMKAC 1 cut(s) 420
XspI CTAG 2 cut(s) 153, 393
ZrmI AGTACT 1 cut(s) 1252
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.