Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0003084

Physical Location & Seq

Genomic Coordinates Forward (+)

22275944 .. 22280401

Gene Structure 4458 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2010 bp

ATGCAGGATGCATCATCATCGTTGGTCACTCTCCCTCGAGAGGAGTATTCGAAAGATCTGATCAAAGTGGGACCCCTCAGATCGTCACCTGCAAATCGACACATTGAGGATGGCCATCAACTACCATTCTTCCCTCCATTTTTATGGTCCAAACCAAACCCGTCCTATTCAAAGACAACCATACACAAAACCAACACAGAAGCCTCATCACTTCAAGAAACTTCAGTTCTTTTTCGTGGTCCAGAAACTCCAGTTTGTCTCTGCTCTGTCCTCTCGTCTCCGATTCGGATCGAACTCGAATCCGACCAGGTGAATGCCAAATTCATATACACAAAAACCCAAAAAAAAATGGCAGTTCTTGAAACCATACAGTCTCAGTTGCCACTTCAAGAATCATTTCTCAACACCAGCACTGTCGTTGCACTCACTGTGTTCTTCACGCTCCTCTGCGTTTGTATAATTATCGGTCATTTGCTCGAAGAGAACCGCTGGGCCAATGAATCGATCACTGCCCTTCTCTTGGGTTTGGTTGCTGGAGTGGTGGTGTTGCTGGTGACAGGGTTCGAAAGCTCGAGGATTGATTCCCTTGATCGATCTTTAGCGAGGACTTGTTCTTTCTGTATCTACTTCCTCCAATCATTTTCAATTTTCCAGGTCAAGAAAAAGCAGTTTTTCAAGAATTTCACCACAATTTTGTTGTTTGGAATCGTCGGTACAGTAATTTCTTTCTGCATCATATCACTAGGTGCCGATTTACTTTTCAATAGATTTGGTTTCTCAACTCTGACCATTAAGGACTTCCTAGCGATTGGTGCCATATTCTCAGCAACTGATTCAGTTTGTACATTGCAGGTTCTAAATCAAGATGAGACACCGTTTCTTTACAGTATCGTGTTTGGGGAGGGAGTAGTGAATGATGCCACCTCCATTGTGCTTTTCAATGCAGTACAATCGCTAGATGTCAGCAACGTCAGCGCGCTTACAGCGTTGACCTTGTTGGGGAATTTTCTTTACCTCTTCTTCACCAGTACTCTTCTTGGTGTAGCAGCCGGTCTGATTAGCGCTTATATCATAAAAACGCTTTACTTTGGAAGGCATTCTACAGATCGTGAAGTTGCGCTGATGATTCTTATGGCTTATTTGTCATACATGTTGGCTGAGCTTCTGAATCTAAGTGGAATTTTGACAGTGTTTTTCTGCGGCATAGTTATGTCACATTATACATGGCACAATGTTACAGAAAGCTCGAGGGTAACAACCAAGCATGCATTTGCAACATTGTCATTCATTGCAGAAACCTTTATATTCCTTTATGTTGGCATGGATGCCTTGGACATTGACAAATGGAAAGCCAGCAAGGCAAGTCCGGGGACTTCAGTTGGTGTCAGTTCAATCCTGTTTGCTCTAGTATTAGTCGGAAGGGCAGCATTTGTCTTCCCGATTGCGAACATCAAAAACTGCTTTAAGAAAAGAGATGGTACGAAAATCGAGTTCAAAGACCAGTTTACAATGTGGTGGGCAGGCCTAATGAGGGGTGCAGTCACTATTGCGTTGTCATACAACCAATTTGCAGACAATACCGAAACGACATCAACGCAAGATAGTTCTTTGATGATCACCAGTACCATAATTGTTGTTCTCTTCAGCACAGTGGTATTTGGCTCCATCACAAAGCCATTAATCTCAGCTCTGATGCATCCACATGCAAAAGCAAACATTTCAGATGCAACTGATATGCCTAGCCTAGAAGACTTGAGGCTACTTTTCCTGGAAACCGGCGAGGCAAGTGAGGGAGGCAACAGTGAGCCAGCCAGAAAACCAAGCAGCTTTAGGTTGTTAATAACATATCCAACTTCAACTGTTCACTACTTTTGGAGAAAGTTTGATGACAAGTTCATGAGACCGGTTTTCGGGGGACGGGGTTTTGTTCCATTTGTTCCTGGTTCACCTAGTGGTGCAGCAGAAGATCGAGCTGCAGAACATACTGAACATATTGAACATACTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005451 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006814 GO:0006873 GO:0006885 GO:0008150 GO:0008324 GO:0009987 GO:0010107 GO:0010119 GO:0015075 GO:0015077 GO:0015078 GO:0015079 GO:0015081 GO:0015291 GO:0015297 GO:0015298 GO:0015299 GO:0015318 GO:0015385 GO:0015386 GO:0015491 GO:0015672 GO:0016020 GO:0019725 GO:0022804 GO:0022821 GO:0022857 GO:0022890 GO:0030001 GO:0030003 GO:0030004 GO:0030641 GO:0031090 GO:0034220 GO:0035725 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0051179 GO:0051234 GO:0051453 GO:0055065 GO:0055067 GO:0055075 GO:0055080 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0071804 GO:0071805 GO:0071944 GO:0090333 GO:0098588 GO:0098655 GO:0098657 GO:0098659 GO:0098660 GO:0098662 GO:0098719 GO:0098739 GO:0098771 GO:0098805 GO:0099516 GO:0099587 GO:1902600

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger

Protein Analysis

670

Amino Acids

73.87

Weight (kDa)

6.29

Isoelectric Point (pI)

41.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_H_Exchanger	PF00999	219 - 561	2.7e-51	Sodium/hydrogen exchanger, transmembrane

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0003084)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G55470
fragaria_vesca	FvH4_3g30310 FvH4_6g05300 FvH4_6g05300 FvH4_6g05300 FvH4_6g05300 FvH4_6g05300 FvH4_6g05300
malus_domestica	MD04G1209700.v1.1 MD11G1207200.v1.1 MD12G1224200.v1.1
prunus_persica	Prupe.4G228200_v2.0.a1 Prupe.4G228200_v2.0.a1 Prupe.4G228200_v2.0.a1 Prupe.6G330600_v2.0.a1
pyrus_communis	pycom04g18580 pycom12g20970
rosa_chinensis	RchiOBHm_Chr3g0454041 RchiOBHm_Chr5g0056181
rosa_laevigata	RLG00000025487 RLG00000035061
rosa_multiflora	Rmu_sc0000680.1_g000026
rosa_roxburghii	Rroxscaffold_1G00024110 Rroxscaffold_6G00430830
rosa_rugosa	Rorug02G0652500 Rorug05G0297800
rosa_samantha	Rh3AG055200 Rh3BG056800 Rh3CG056000 Rh3DG057300 Rh5AG369000 Rh5BG380000 Rh5CG402800 Rh5DG393000
rosa_wichuraiana	Rw0G004440 Rw0G012680 Rw3G004240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	97
Acc36I	ACCTGC	2 cut(s)	97, 841
AccB1I	GGYRCC	2 cut(s)	746, 812
AccII	CGCG	1 cut(s)	977
AciI	CCGC	2 cut(s)	487, 1200
AclWI	GGATC	1 cut(s)	296
AcoI	YGGCCR	1 cut(s)	112
AcsI	RAATTY	4 cut(s)	320, 679, 1003, 1179
AcuI	CTGAAG	3 cut(s)	207, 1359, 1627
AdeI	CACNNNGTG	2 cut(s)	746, 1952
AfaI	GTAC	6 cut(s)	715, 844, 948, 1030, 1480, 1624
AfeI	AGCGCT	1 cut(s)	1063
AfiI	CCNNNNNNNGG	5 cut(s)	40, 520, 999, 1531, 1910
AflIII	ACRYGT	1 cut(s)	1149
AgeI	ACCGGT	1 cut(s)	1903
AjnI	CCWGG	4 cut(s)	306, 651, 1767, 1939
AluBI	AGCT	6 cut(s)	570, 1162, 1245, 1688, 1827, 1973
AluI	AGCT	6 cut(s)	570, 1162, 1245, 1688, 1827, 1973
Alw26I	GTCTC	5 cut(s)	263, 282, 378, 863, 1894
AlwI	GGATC	1 cut(s)	296
AlwNI	CAGNNNCTG	1 cut(s)	830
Ama87I	CYCGRG	3 cut(s)	36, 571, 1246
Aor51HI	AGCGCT	1 cut(s)	1063
AoxI	GGCC	3 cut(s)	112, 492, 1522
ApeKI	GCWGC	5 cut(s)	1046, 1424, 1824, 1958, 1973
ApoI	RAATTY	4 cut(s)	320, 679, 1003, 1179
AseI	ATTAAT	1 cut(s)	1679
AsiGI	ACCGGT	1 cut(s)	1903
Asp700I	GAANNNNTTC	2 cut(s)	396, 1096
AspLEI	GCGC	4 cut(s)	977, 979, 1064, 1120
AspS9I	GGNCC	4 cut(s)	71, 147, 239, 492
AsuC2I	CCSGG	1 cut(s)	1368
AsuHPI	GGTGA	7 cut(s)	78, 322, 565, 676, 1015, 1609, 1938
AsuII	TTCGAA	2 cut(s)	50, 564
AvaI	CYCGRG	3 cut(s)	36, 571, 1246
AvaII	GGWCC	3 cut(s)	71, 147, 239
BalI	TGGCCA	1 cut(s)	114
BanI	GGYRCC	2 cut(s)	746, 812
BarI	GAAGNNNNNNTAC	2 cut(s)	1084, 1116
BbsI	GAAGAC	2 cut(s)	1426, 1755
BbvI	GCAGC	5 cut(s)	1058, 1436, 1836, 1960, 1970
BccI	CCATC	4 cut(s)	104, 123, 1469, 1673
BcgI	CGANNNNNNTGC	3 cut(s)	34, 933, 967
BciT130I	CCWGG	4 cut(s)	308, 653, 1769, 1941
BclI	TGATCA	2 cut(s)	60, 1614
BcnI	CCSGG	1 cut(s)	1368
BcoDI	GTCTC	5 cut(s)	263, 282, 378, 863, 1894
BfaI	CTAG	7 cut(s)	743, 803, 956, 1406, 1740, 1745, 1950
BfmI	CTRYAG	2 cut(s)	1101, 1974
BfoI	RGCGCY	1 cut(s)	1065
BfuAI	ACCTGC	2 cut(s)	97, 841
BglI	GCCNNNNNGGC	1 cut(s)	1358
BglII	AGATCT	1 cut(s)	55
BisI	GCNGC	6 cut(s)	1047, 1201, 1425, 1825, 1959, 1974
BlpI	GCTNAGC	1 cut(s)	1158
BlsI	GCNGC	6 cut(s)	1048, 1202, 1426, 1826, 1960, 1975
BmcAI	AGTACT	1 cut(s)	1030
Bme1390I	CCNGG	5 cut(s)	308, 653, 1368, 1769, 1941
Bme18I	GGWCC	3 cut(s)	71, 147, 239
BmeT110I	CYCGRG	3 cut(s)	36, 571, 1246
BmgT120I	GGNCC	4 cut(s)	71, 147, 239, 492
BmiI	GGNNCC	5 cut(s)	72, 73, 748, 814, 1663
BmrFI	CCNGG	5 cut(s)	308, 653, 1368, 1769, 1941
BmsI	GCATC	7 cut(s)	20, 741, 907, 1315, 1683, 1705, 1714
BpiI	GAAGAC	2 cut(s)	1426, 1755
BpmI	CTGGAG	2 cut(s)	234, 555
Bpu1102I	GCTNAGC	1 cut(s)	1158
Bpu14I	TTCGAA	2 cut(s)	50, 564
BpuEI	CTTGAG	1 cut(s)	1774
BpuMI	CCSGG	1 cut(s)	1368
Bsa29I	ATCGAT	2 cut(s)	503, 592
BsaBI	GATNNNNATC	2 cut(s)	114, 287
BsaI	GGTCTC	1 cut(s)	1894
BsaJI	CCNNGG	2 cut(s)	1329, 1367
BsaWI	WCCGGW	1 cut(s)	1903
BsaXI	ACNNNNNCTCC	2 cut(s)	528, 558
Bsc4I	CCNNNNNNNGG	5 cut(s)	40, 520, 999, 1531, 1910
Bse118I	RCCGGY	3 cut(s)	1049, 1775, 1903
Bse1I	ACTGG	4 cut(s)	251, 1026, 1501, 1620
Bse3DI	GCAATG	2 cut(s)	845, 1287
Bse8I	GATNNNNATC	2 cut(s)	114, 287
BseBI	CCWGG	4 cut(s)	308, 653, 1769, 1941
BseCI	ATCGAT	2 cut(s)	503, 592
BseDI	CCNNGG	2 cut(s)	1329, 1367
BseGI	GGATG	4 cut(s)	13, 115, 1330, 1696
BseJI	GATNNNNATC	2 cut(s)	114, 287
BseLI	CCNNNNNNNGG	5 cut(s)	40, 520, 999, 1531, 1910
BseMI	GCAATG	2 cut(s)	845, 1287
BseMII	CTCAG	5 cut(s)	91, 389, 837, 1149, 1698
BseNI	ACTGG	4 cut(s)	251, 1026, 1501, 1620
BsePI	GCGCGC	1 cut(s)	975
BseRI	GAGGAG	2 cut(s)	56, 434
BseXI	GCAGC	5 cut(s)	1058, 1436, 1836, 1960, 1970
BseYI	CCCAGC	1 cut(s)	489
BsgI	GTGCAG	2 cut(s)	1557, 1977
Bsh1236I	CGCG	1 cut(s)	977
BshFI	GGCC	3 cut(s)	114, 494, 1524
BshNI	GGYRCC	2 cut(s)	746, 812
BshTI	ACCGGT	1 cut(s)	1903
BshVI	ATCGAT	2 cut(s)	503, 592
BsiHKCI	CYCGRG	3 cut(s)	36, 571, 1246
BsiSI	CCGG	4 cut(s)	1050, 1367, 1776, 1904
BslFI	GGGAC	3 cut(s)	84, 1384, 1929
BslI	CCNNNNNNNGG	5 cut(s)	40, 520, 999, 1531, 1910
BsmAI	GTCTC	5 cut(s)	263, 282, 378, 863, 1894
BsmBI	CGTCTC	1 cut(s)	282
BsmFI	GGGAC	3 cut(s)	84, 1384, 1929
BsmI	GAATGC	2 cut(s)	319, 1096
BsnI	GGCC	3 cut(s)	114, 494, 1524
Bso31I	GGTCTC	1 cut(s)	1894
BsoBI	CYCGRG	3 cut(s)	36, 571, 1246
Bsp119I	TTCGAA	2 cut(s)	50, 564
Bsp1407I	TGTACA	1 cut(s)	842
Bsp1720I	GCTNAGC	1 cut(s)	1158
BspACI	CCGC	2 cut(s)	487, 1200
BspANI	GGCC	3 cut(s)	114, 494, 1524
BspCNI	CTCAG	5 cut(s)	90, 388, 836, 1150, 1697
BspDI	ATCGAT	2 cut(s)	503, 592
BspFNI	CGCG	1 cut(s)	977
BspHI	TCATGA	1 cut(s)	1896
BspLI	GGNNCC	5 cut(s)	72, 73, 748, 814, 1663
BspMAI	CTGCAG	1 cut(s)	1978
BspMI	ACCTGC	2 cut(s)	97, 841
BspPI	GGATC	1 cut(s)	296
BspT104I	TTCGAA	2 cut(s)	50, 564
BspT107I	GGYRCC	2 cut(s)	746, 812
BspTNI	GGTCTC	1 cut(s)	1894
BsrDI	GCAATG	2 cut(s)	845, 1287
BsrFI	RCCGGY	3 cut(s)	1049, 1775, 1903
BsrGI	TGTACA	1 cut(s)	842
BsrI	ACTGG	4 cut(s)	251, 1026, 1501, 1620
BssAI	RCCGGY	3 cut(s)	1049, 1775, 1903
BssECI	CCNNGG	2 cut(s)	1329, 1367
BssHII	GCGCGC	1 cut(s)	975
BssT1I	CCWWGG	1 cut(s)	1329
Bst2UI	CCWGG	4 cut(s)	308, 653, 1769, 1941
Bst6I	CTCTTC	4 cut(s)	474, 1022, 1038, 1646
BstAUI	TGTACA	1 cut(s)	842
BstBI	TTCGAA	2 cut(s)	50, 564
BstC8I	GCNNGC	5 cut(s)	977, 1266, 1354, 1522, 1809
BstDEI	CTNAG	6 cut(s)	77, 375, 823, 1158, 1172, 1684
BstF5I	GGATG	4 cut(s)	13, 115, 1330, 1696
BstFNI	CGCG	1 cut(s)	977
BstH2I	RGCGCY	1 cut(s)	1065
BstHHI	GCGC	4 cut(s)	977, 979, 1064, 1120
BstMAI	GTCTC	5 cut(s)	263, 282, 378, 863, 1894
BstMWI	GCNNNNNNNGC	4 cut(s)	812, 972, 983, 1358
BstNI	CCWGG	4 cut(s)	308, 653, 1769, 1941
BstNSI	RCATGY	3 cut(s)	1153, 1268, 1706
BstSCI	CCNGG	5 cut(s)	306, 651, 1366, 1767, 1939
BstSFI	CTRYAG	2 cut(s)	1101, 1974
BstUI	CGCG	1 cut(s)	977
BstV1I	GCAGC	5 cut(s)	1058, 1436, 1836, 1960, 1970
BstV2I	GAAGAC	2 cut(s)	1426, 1755
BstX2I	RGATCY	1 cut(s)	55
BstXI	CCANNNNNNTGG	1 cut(s)	144
BstYI	RGATCY	1 cut(s)	55
Bsu15I	ATCGAT	2 cut(s)	503, 592
BsuRI	GGCC	3 cut(s)	114, 494, 1524
BsuTUI	ATCGAT	2 cut(s)	503, 592
BtsCI	GGATG	4 cut(s)	13, 115, 1330, 1696
BtsI	GCAGTG	1 cut(s)	507
BtsIMutI	CAGTG	6 cut(s)	411, 426, 507, 1194, 1656, 1807
BveI	ACCTGC	2 cut(s)	97, 841
Cac8I	GCNNGC	5 cut(s)	977, 1266, 1354, 1522, 1809
CaiI	CAGNNNCTG	1 cut(s)	830
CciI	TCATGA	1 cut(s)	1896
CfoI	GCGC	4 cut(s)	977, 979, 1064, 1120
Cfr10I	RCCGGY	3 cut(s)	1049, 1775, 1903
Cfr13I	GGNCC	4 cut(s)	71, 147, 239, 492
ClaI	ATCGAT	2 cut(s)	503, 592
CsiI	ACCWGGT	1 cut(s)	306
Csp6I	GTAC	6 cut(s)	714, 843, 947, 1029, 1479, 1623
CspAI	ACCGGT	1 cut(s)	1903
CspCI	CAANNNNNGTGG	2 cut(s)	910, 945
CviAII	CATG	6 cut(s)	1150, 1224, 1265, 1321, 1703, 1897
CviQI	GTAC	6 cut(s)	714, 843, 947, 1029, 1479, 1623
DdeI	CTNAG	6 cut(s)	77, 375, 823, 1158, 1172, 1684
DraIII	CACNNNGTG	2 cut(s)	746, 1952
EaeI	YGGCCR	1 cut(s)	112
Eam1104I	CTCTTC	4 cut(s)	474, 1022, 1038, 1646
EarI	CTCTTC	4 cut(s)	474, 1022, 1038, 1646
Eco130I	CCWWGG	1 cut(s)	1329
Eco147I	AGGCCT	1 cut(s)	1524
Eco31I	GGTCTC	1 cut(s)	1894
Eco47I	GGWCC	3 cut(s)	71, 147, 239
Eco47III	AGCGCT	1 cut(s)	1063
Eco57I	CTGAAG	3 cut(s)	207, 1359, 1627
Eco88I	CYCGRG	3 cut(s)	36, 571, 1246
EcoO109I	RGGNCCY	1 cut(s)	71
EcoRII	CCWGG	4 cut(s)	306, 651, 1767, 1939
EcoT14I	CCWWGG	1 cut(s)	1329
EcoT22I	ATGCAT	3 cut(s)	13, 1270, 1698
ErhI	CCWWGG	1 cut(s)	1329
Esp3I	CGTCTC	1 cut(s)	282
FaeI	CATG	6 cut(s)	1153, 1227, 1268, 1324, 1706, 1900
FaqI	GGGAC	3 cut(s)	84, 1384, 1929
FatI	CATG	6 cut(s)	1149, 1223, 1264, 1320, 1702, 1896
FbaI	TGATCA	2 cut(s)	60, 1614
Fnu4HI	GCNGC	6 cut(s)	1047, 1201, 1425, 1825, 1959, 1974
FokI	GGATG	4 cut(s)	20, 122, 1337, 1683
Fsp4HI	GCNGC	6 cut(s)	1047, 1201, 1425, 1825, 1959, 1974
FspBI	CTAG	7 cut(s)	743, 803, 956, 1406, 1740, 1745, 1950
GlaI	GCGC	4 cut(s)	976, 978, 1063, 1119
GluI	GCNGC	6 cut(s)	1047, 1201, 1425, 1825, 1959, 1974
GsaI	CCCAGC	1 cut(s)	493
GsuI	CTGGAG	2 cut(s)	234, 555
HaeII	RGCGCY	1 cut(s)	1065
HaeIII	GGCC	3 cut(s)	114, 494, 1524
HapII	CCGG	4 cut(s)	1050, 1367, 1776, 1904
HhaI	GCGC	4 cut(s)	977, 979, 1064, 1120
Hin1II	CATG	6 cut(s)	1153, 1227, 1268, 1324, 1706, 1900
Hin6I	GCGC	4 cut(s)	975, 977, 1062, 1118
HinP1I	GCGC	4 cut(s)	975, 977, 1062, 1118
HincII	GTYRAC	1 cut(s)	990
HindII	GTYRAC	1 cut(s)	990
HinfI	GANTC	9 cut(s)	283, 299, 392, 500, 581, 705, 833, 1126, 1168
HpaII	CCGG	4 cut(s)	1050, 1367, 1776, 1904
HphI	GGTGA	7 cut(s)	78, 322, 565, 676, 1015, 1609, 1938
Hpy166II	GTNNAC	4 cut(s)	990, 1506, 1864, 1946
Hpy8I	GTNNAC	4 cut(s)	990, 1506, 1864, 1946
Hpy99I	CGWCG	1 cut(s)	713
HpyAV	CCTTC	3 cut(s)	524, 1086, 1413
HpyCH4IV	ACGT	1 cut(s)	969
HpyF10VI	GCNNNNNNNGC	4 cut(s)	812, 972, 983, 1358
HpyF3I	CTNAG	6 cut(s)	77, 375, 823, 1158, 1172, 1684
HpySE526I	ACGT	1 cut(s)	969
Hsp92II	CATG	6 cut(s)	1153, 1227, 1268, 1324, 1706, 1900
HspAI	GCGC	4 cut(s)	975, 977, 1062, 1118
KflI	GGGWCCC	1 cut(s)	71
Ksp22I	TGATCA	2 cut(s)	60, 1614
LmnI	GCTCC	2 cut(s)	447, 1667
Lsp1109I	GCAGC	5 cut(s)	1058, 1436, 1836, 1960, 1970
LweI	GCATC	7 cut(s)	20, 741, 907, 1315, 1683, 1705, 1714
MabI	ACCWGGT	1 cut(s)	306
MaeI	CTAG	7 cut(s)	743, 803, 956, 1406, 1740, 1745, 1950
MaeII	ACGT	1 cut(s)	969
MaeIII	GTNAC	7 cut(s)	25, 84, 553, 1212, 1234, 1252, 1540
MflI	RGATCY	1 cut(s)	55
MlsI	TGGCCA	1 cut(s)	114
MluNI	TGGCCA	1 cut(s)	114
MmeI	TCCRAC	3 cut(s)	327, 1396, 1874
Mox20I	TGGCCA	1 cut(s)	114
Mph1103I	ATGCAT	3 cut(s)	13, 1270, 1698
MroXI	GAANNNNTTC	2 cut(s)	396, 1096
MscI	TGGCCA	1 cut(s)	114
MseI	TTAA	4 cut(s)	792, 1464, 1679, 1838
MslI	CAYNNNNRTG	3 cut(s)	142, 1208, 1701
Msp20I	TGGCCA	1 cut(s)	114
MspA1I	CMGCKG	1 cut(s)	489
MspI	CCGG	4 cut(s)	1050, 1367, 1776, 1904
MspR9I	CCNGG	5 cut(s)	308, 653, 1368, 1769, 1941
Mva1269I	GAATGC	2 cut(s)	319, 1096
MvaI	CCWGG	4 cut(s)	308, 653, 1769, 1941
MvnI	CGCG	1 cut(s)	977
MwoI	GCNNNNNNNGC	4 cut(s)	812, 972, 983, 1358
NciI	CCSGG	1 cut(s)	1368
NlaIII	CATG	6 cut(s)	1153, 1227, 1268, 1324, 1706, 1900
NlaIV	GGNNCC	5 cut(s)	72, 73, 748, 814, 1663
NmuCI	GTSAC	5 cut(s)	25, 84, 553, 1212, 1540
NsiI	ATGCAT	3 cut(s)	13, 1270, 1698
NspI	RCATGY	3 cut(s)	1153, 1268, 1706
NspV	TTCGAA	2 cut(s)	50, 564
PaeI	GCATGC	1 cut(s)	1268
PaeR7I	CTCGAG	3 cut(s)	36, 571, 1246
PagI	TCATGA	1 cut(s)	1896
PaqCI	CACCTGC	1 cut(s)	97
PauI	GCGCGC	1 cut(s)	975
PceI	AGGCCT	1 cut(s)	1524
PciI	ACATGT	1 cut(s)	1149
PctI	GAATGC	2 cut(s)	319, 1096
PdmI	GAANNNNTTC	2 cut(s)	396, 1096
PfeI	GAWTC	9 cut(s)	283, 299, 392, 500, 581, 705, 833, 1126, 1168
PfoI	TCCNGGA	1 cut(s)	1767
PinAI	ACCGGT	1 cut(s)	1903
PkrI	GCNGC	6 cut(s)	1048, 1202, 1426, 1826, 1960, 1975
PpuMI	RGGWCCY	1 cut(s)	71
PscI	ACATGT	1 cut(s)	1149
PshBI	ATTAAT	1 cut(s)	1679
Psp5II	RGGWCCY	1 cut(s)	71
Psp6I	CCWGG	4 cut(s)	306, 651, 1767, 1939
PspFI	CCCAGC	1 cut(s)	489
PspGI	CCWGG	4 cut(s)	306, 651, 1767, 1939
PspN4I	GGNNCC	5 cut(s)	72, 73, 748, 814, 1663
PspPI	GGNCC	4 cut(s)	71, 147, 239, 492
PspPPI	RGGWCCY	1 cut(s)	71
PspXI	VCTCGAGB	2 cut(s)	571, 1246
PstI	CTGCAG	1 cut(s)	1978
PstNI	CAGNNNCTG	1 cut(s)	830
PsuI	RGATCY	1 cut(s)	55
PteI	GCGCGC	1 cut(s)	975
RsaI	GTAC	6 cut(s)	715, 844, 948, 1030, 1480, 1624
RsaNI	GTAC	6 cut(s)	714, 843, 947, 1029, 1479, 1623
RseI	CAYNNNNRTG	3 cut(s)	142, 1208, 1701
SaqAI	TTAA	4 cut(s)	792, 1464, 1679, 1838
SatI	GCNGC	6 cut(s)	1047, 1201, 1425, 1825, 1959, 1974
Sau96I	GGNCC	4 cut(s)	71, 147, 239, 492
ScaI	AGTACT	1 cut(s)	1030
ScrFI	CCNGG	5 cut(s)	308, 653, 1368, 1769, 1941
SexAI	ACCWGGT	1 cut(s)	306
SfaNI	GCATC	7 cut(s)	20, 741, 907, 1315, 1683, 1705, 1714
SfcI	CTRYAG	2 cut(s)	1101, 1974
Sfr274I	CTCGAG	3 cut(s)	36, 571, 1246
SfuI	TTCGAA	2 cut(s)	50, 564
SinI	GGWCC	3 cut(s)	71, 147, 239
SlaI	CTCGAG	3 cut(s)	36, 571, 1246
SmiMI	CAYNNNNRTG	3 cut(s)	142, 1208, 1701
SmlI	CTYRAG	4 cut(s)	36, 571, 1246, 1753
SmoI	CTYRAG	4 cut(s)	36, 571, 1246, 1753
SphI	GCATGC	1 cut(s)	1268
SseBI	AGGCCT	1 cut(s)	1524
SsiI	CCGC	2 cut(s)	487, 1200
SspMI	CTAG	7 cut(s)	743, 803, 956, 1406, 1740, 1745, 1950
StuI	AGGCCT	1 cut(s)	1524
StyD4I	CCNGG	5 cut(s)	306, 651, 1366, 1767, 1939
StyI	CCWWGG	1 cut(s)	1329
TaiI	ACGT	1 cut(s)	972
TaqII	GACCGA	1 cut(s)	455
TatI	WGTACW	3 cut(s)	842, 946, 1028
TauI	GCSGC	1 cut(s)	1203
TfiI	GAWTC	9 cut(s)	283, 299, 392, 500, 581, 705, 833, 1126, 1168
Tru1I	TTAA	4 cut(s)	792, 1464, 1679, 1838
Tru9I	TTAA	4 cut(s)	792, 1464, 1679, 1838
TscAI	CASTG	6 cut(s)	418, 433, 514, 1194, 1656, 1807
TseFI	GTSAC	5 cut(s)	25, 84, 553, 1212, 1540
TseI	GCWGC	5 cut(s)	1046, 1424, 1824, 1958, 1973
Tsp45I	GTSAC	5 cut(s)	25, 84, 553, 1212, 1540
TspDTI	ATGAA	4 cut(s)	313, 513, 1276, 1885
TspRI	CASTG	6 cut(s)	418, 433, 514, 1194, 1656, 1807
VpaK11BI	GGWCC	3 cut(s)	71, 147, 239
VspI	ATTAAT	1 cut(s)	1679
XapI	RAATTY	4 cut(s)	320, 679, 1003, 1179
XceI	RCATGY	3 cut(s)	1153, 1268, 1706
XhoI	CTCGAG	3 cut(s)	36, 571, 1246
XmnI	GAANNNNTTC	2 cut(s)	396, 1096
XspI	CTAG	7 cut(s)	743, 803, 956, 1406, 1740, 1745, 1950
ZrmI	AGTACT	1 cut(s)	1030
Zsp2I	ATGCAT	3 cut(s)	13, 1270, 1698

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.