pycom13g01330

Cyclin, N-terminal domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
OG0009126
Physical Location & Seq
Reverse (-)
861774 .. 862208
435 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 189 bp
ATGCTCTACACCAATCCTCGCTCTCTCGCTGCATCAGTCTTGGTTGCTTCATATATCATCACGGTACCTAAACAGATGTTGGAATTTCCTGTTCTTCCTTGGGTTAAGTTTGTAACAGGATACGATGAAGAGTTTATTCTTGATACAGTCACAGGCATTCTTAAGCACGTTTTCGACGCTTCTCGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0050789 GO:0050794 GO:0051726 GO:0065007
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cyclin_N

Protein Analysis

63

Amino Acids

7.03

Weight (kDa)

5.56

Isoelectric Point (pI)

33.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 64
AccB1I GGYRCC 1 cut(s) 64
AcsI RAATTY 1 cut(s) 83
AfaI GTAC 1 cut(s) 66
AflII CTTAAG 1 cut(s) 161
ApeKI GCWGC 1 cut(s) 29
ApoI RAATTY 1 cut(s) 83
Asp718I GGTACC 1 cut(s) 64
BanI GGYRCC 1 cut(s) 64
BbvI GCAGC 1 cut(s) 16
BciVI GTATCC 1 cut(s) 113
BfaI CTAG 1 cut(s) 187
BfrI CTTAAG 1 cut(s) 161
BfuI GTATCC 1 cut(s) 113
BisI GCNGC 1 cut(s) 30
BlsI GCNGC 1 cut(s) 31
BmiI GGNNCC 1 cut(s) 66
BmsI GCATC 1 cut(s) 41
BsaJI CCNNGG 1 cut(s) 98
BseDI CCNNGG 1 cut(s) 98
BseXI GCAGC 1 cut(s) 16
BshNI GGYRCC 1 cut(s) 64
BsmI GAATGC 1 cut(s) 156
BspLI GGNNCC 1 cut(s) 66
BspT107I GGYRCC 1 cut(s) 64
BspTI CTTAAG 1 cut(s) 161
BssECI CCNNGG 1 cut(s) 98
BssT1I CCWWGG 1 cut(s) 98
Bst4CI ACNGT 2 cut(s) 64, 148
Bst6I CTCTTC 1 cut(s) 123
BstAFI CTTAAG 1 cut(s) 161
BstV1I GCAGC 1 cut(s) 16
BsuI GTATCC 1 cut(s) 113
Csp6I GTAC 1 cut(s) 65
CviQI GTAC 1 cut(s) 65
Eam1104I CTCTTC 1 cut(s) 123
EarI CTCTTC 1 cut(s) 123
Eco130I CCWWGG 1 cut(s) 98
EcoT14I CCWWGG 1 cut(s) 98
ErhI CCWWGG 1 cut(s) 98
FaiI YATR 2 cut(s) 52, 54
Fnu4HI GCNGC 1 cut(s) 30
Fsp4HI GCNGC 1 cut(s) 30
FspBI CTAG 1 cut(s) 187
GluI GCNGC 1 cut(s) 30
Hpy188III TCNNGA 1 cut(s) 140
Hpy99I CGWCG 1 cut(s) 179
HpyCH4III ACNGT 2 cut(s) 64, 148
HpyCH4IV ACGT 1 cut(s) 168
HpyCH4V TGCA 1 cut(s) 32
HpySE526I ACGT 1 cut(s) 168
KpnI GGTACC 1 cut(s) 68
LpnPI CCDG 3 cut(s) 102, 102, 138
Lsp1109I GCAGC 1 cut(s) 16
LweI GCATC 1 cut(s) 41
MaeI CTAG 1 cut(s) 187
MaeII ACGT 1 cut(s) 168
MaeIII GTNAC 2 cut(s) 112, 148
MboII GAAGA 2 cut(s) 86, 140
MluCI AATT 1 cut(s) 83
MmeI TCCRAC 1 cut(s) 60
MnlI CCTC 1 cut(s) 27
MseI TTAA 2 cut(s) 105, 162
MspCI CTTAAG 1 cut(s) 161
Mva1269I GAATGC 1 cut(s) 156
NlaIV GGNNCC 1 cut(s) 66
NmuCI GTSAC 1 cut(s) 148
PctI GAATGC 1 cut(s) 156
PkrI GCNGC 1 cut(s) 31
PspN4I GGNNCC 1 cut(s) 66
RsaI GTAC 1 cut(s) 66
RsaNI GTAC 1 cut(s) 65
SaqAI TTAA 2 cut(s) 105, 162
SatI GCNGC 1 cut(s) 30
SetI ASST 2 cut(s) 70, 171
SfaNI GCATC 1 cut(s) 41
SmlI CTYRAG 1 cut(s) 161
SmoI CTYRAG 1 cut(s) 161
Sse9I AATT 1 cut(s) 83
SspMI CTAG 1 cut(s) 187
StyI CCWWGG 1 cut(s) 98
TaaI ACNGT 2 cut(s) 64, 148
TaiI ACGT 1 cut(s) 171
TaqI TCGA 1 cut(s) 174
TasI AATT 1 cut(s) 83
Tru1I TTAA 2 cut(s) 105, 162
Tru9I TTAA 2 cut(s) 105, 162
TseFI GTSAC 1 cut(s) 148
TseI GCWGC 1 cut(s) 29
Tsp45I GTSAC 1 cut(s) 148
TspDTI ATGAA 2 cut(s) 39, 141
Vha464I CTTAAG 1 cut(s) 161
XapI RAATTY 1 cut(s) 83
XspI CTAG 1 cut(s) 187
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.