Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0009126

Physical Location & Seq

Genomic Coordinates Reverse (-)

44338352 .. 44340099

Gene Structure 1748 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0270500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1713 bp

ATGAGGGGAATGGAGTCAAGTCAGTTCTGGTGCAAGTATAGCACGGACGAAGAAGGGAGACTAGCCAATCTGTTTTGGAGGGACGAACAATCACTTTTGGACTACAGCGCATACGGTGATGTGTTGGTTATGGACAGCACGTACAAGACAAATCTGTATGGGAAGCCGCTTGTTGTATTTGTTGGCTGCAACAATCACAGAGCGACTGTTGTGTTCGGGTTCGCCCTTATACGTGATGAGAAGGAGGATACGTACATATGGGTGTTCAGGAATTTTCTCGAGTCAATGAACTATAAACAGCCTGTATCAGTCCTAACTGACGGAGACGAGTCGGTCAGAAATGTAGTAGTGTGTTTGATGCCAGGAGCTCGTCACAGGCTATGTGTGTGGCACATTGGAAGAAACATAGGGCAAAATGTGAAGGATGATGCAGCTCAAAAACTTATTGGAAACATGATTTATTTGTCAATGAGTGTTGGTGAATGGGAGGCCGCCTGGCATTCAATGGTGGGTAGACATGGCTTGTCTGACAATGCATGGGTGGCTAGCTTGTATAACAAACGGGAAAGGTGGGCGGAGGCATTCTTCAGAGGGCATTTTTTTGGTGGAATGTGCAGCACCCAGCGTGTGGAAGGCATGCATTCAAAACTGAAAAAGCAGATTGGGAGGTACACCAGGCTGTGTGAAGTAATGCCAAGAATGGAGAGGACACTGGGGCGCATCCGGAACCGCATTCTCTATGACAACTTCCTGTCGAAAAACAGAGCACCCGTGTACGAGACGCACATGAGGGGCATTGAGGAAGATGCATGCAGGCTGTTCACACATGACATATTTGTCATGATTAAGTCTCAGATCTTGTTTGAGAGGAAGTTTGTTATGGAGCGTGAAGTAGCCTTCAATATTTCGGACTCTGTGATGTTCTACCTACGGCAATATGACAGGCCGGAACGGAAGTGGTGTGTTGAGTTCCGTTCAGACCCGGCTAATCCGAAGTGGCTCTGTTCTTGCAAATTGTTCGAATCAGACGGAATTCCCTGCGGTCACATTTTGAACATTTTGAAGTATCAGCTTGTCTCTAGATATCCCAAAAGCCTGATATCCAGGTGGTGGACCAAGGCTGTGAGTGAAACGACATTTGCACCAAGACTGAAGGGCCGAACTGATGATAAGTCGGCAAAGGTTGCACGGTATTCTGCCCTCATATCAGAAGCCTCGAAAGCATGCCAAAATTACGCATTTTCTGACGAAGGATTCAAGGTGGGAATGACTGAATTTGTGAGGCTCGATGAAACTTCAAGCGAATTCCGTGTGGATTTACCAACGGACACAGCAAATGTGCCTCCAATCAGCAACGTTGTGAGGGACCCAACAGTATCCCGTACAAAGGGGATGCTTCTAATCCTTGCACAAACACTGAAAATGGAACCACTGGGCAACGTGCGCACATGTCCTGGTCGGGATGAAGTTGCTCCCGCTCGTGAAGATGTGCCTTCAACGGGTTCAGTACCTCACCCCGCAGATTCAGTCAATCAGTCCACACATTCAGTAGCTGATCCGGCATCGTCAGTCCCTCATCCAGCATGGTGCGTCCCTCAGCCAGACCGTTCATTCTTGCAGCCTGCACCCCTGGTTGAGGGCCACCAACCCTTCTTTGCTTCCCAGCAGTCATCCTCACTTGGTGCTCTGCATCTGCCCTTGAATCCTCAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0008150 GO:0050789 GO:0050794 GO:0051726 GO:0065007

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cyclin_N

Protein Analysis

570

Amino Acids

65.08

Weight (kDa)

8.53

Isoelectric Point (pI)

46.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ZSWIM1-3_RNaseH-like	PF21056	14 - 123	2.2e-07	Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
MULE	PF10551	41 - 134	9.3e-24	MULE transposase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009126)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G01905
fragaria_vesca	FvH4_4g26110 FvH4_4g26110 FvH4_4g26110
malus_domestica	MD13G1015700.v1.1
prunus_persica	Prupe.1G338000_v2.0.a1
pyrus_communis	pycom13g01330 pycom13g01340
rosa_chinensis	RchiOBHm_Chr4g0433681
rosa_laevigata	RLG00000006739
rosa_roxburghii	Rroxscaffold_5G00375120
rosa_rugosa	Rorug04G0270100 Rorug04G0270200 Rorug04G0270300 Rorug04G0270400 Rorug04G0270500 Rorug04G0270600.1
rosa_samantha	Rh4AG325100 Rh4BG332800 Rh4CG348100 Rh4DG329500
rosa_wichuraiana	Rw4G028150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	332, 836
Acc16I	TGCGCA	1 cut(s)	1445
AccB7I	CCANNNNNTGG	2 cut(s)	628, 1110
AccBSI	CCGCTC	1 cut(s)	1478
AccI	GTMKAC	1 cut(s)	514
AccIII	TCCGGA	1 cut(s)	723
AciI	CCGC	7 cut(s)	167, 492, 575, 730, 1041, 1476, 1518
AclI	AACGTT	1 cut(s)	1356
AclWI	GGATC	1 cut(s)	1550
AcsI	RAATTY	4 cut(s)	271, 1032, 1274, 1304
AcuI	CTGAAG	2 cut(s)	571, 1172
AdeI	CACNNNGTG	1 cut(s)	1682
AfaI	GTAC	6 cut(s)	143, 254, 671, 776, 1384, 1509
AfiI	CCNNNNNNNGG	5 cut(s)	628, 1110, 1387, 1499, 1636
AflIII	ACRYGT	1 cut(s)	1448
AgsI	TTSAA	9 cut(s)	504, 645, 901, 1054, 1063, 1258, 1299, 1497, 1702
AjnI	CCWGG	6 cut(s)	361, 494, 674, 1103, 1453, 1629
AluBI	AGCT	5 cut(s)	368, 434, 549, 1072, 1553
AluI	AGCT	5 cut(s)	368, 434, 549, 1072, 1553
Alw21I	GWGCWC	3 cut(s)	370, 769, 1687
Alw26I	GTCTC	5 cut(s)	52, 318, 773, 855, 1081
AlwI	GGATC	1 cut(s)	1550
AlwNI	CAGNNNCTG	1 cut(s)	1553
Ama87I	CYCGRG	1 cut(s)	278
Aor13HI	TCCGGA	1 cut(s)	723
AoxI	GGCC	4 cut(s)	489, 944, 1156, 1639
ApeKI	GCWGC	4 cut(s)	186, 431, 615, 1618
ApoI	RAATTY	4 cut(s)	271, 1032, 1274, 1304
AspLEI	GCGC	3 cut(s)	110, 720, 1446
AspS9I	GGNCC	4 cut(s)	1113, 1156, 1366, 1639
AsuC2I	CCSGG	1 cut(s)	983
AsuHPI	GGTGA	3 cut(s)	128, 491, 1505
AsuII	TTCGAA	1 cut(s)	1020
AsuNHI	GCTAGC	1 cut(s)	545
AvaI	CYCGRG	1 cut(s)	278
AvaII	GGWCC	2 cut(s)	1113, 1366
BanII	GRGCYC	1 cut(s)	370
BauI	CACGAG	1 cut(s)	1479
Bbv12I	GWGCWC	3 cut(s)	370, 769, 1687
BbvCI	CCTCAGC	1 cut(s)	1596
BbvI	GCAGC	4 cut(s)	173, 443, 627, 1630
BceAI	ACGGC	1 cut(s)	947
BcgI	CGANNNNNNTGC	2 cut(s)	1000, 1034
BciT130I	CCWGG	6 cut(s)	363, 496, 676, 1105, 1455, 1631
BciVI	GTATCC	2 cut(s)	241, 1387
BcnI	CCSGG	1 cut(s)	983
BcoDI	GTCTC	5 cut(s)	52, 318, 773, 855, 1081
BfaI	CTAG	3 cut(s)	62, 546, 1080
BfmI	CTRYAG	1 cut(s)	103
BfuI	GTATCC	2 cut(s)	241, 1387
BglII	AGATCT	1 cut(s)	855
BisI	GCNGC	6 cut(s)	167, 187, 432, 492, 616, 1619
BlsI	GCNGC	6 cut(s)	168, 188, 433, 493, 617, 1620
Bme1390I	CCNGG	7 cut(s)	363, 496, 676, 983, 1105, 1455, 1631
Bme18I	GGWCC	2 cut(s)	1113, 1366
BmeT110I	CYCGRG	1 cut(s)	278
BmgT120I	GGNCC	4 cut(s)	1113, 1156, 1366, 1639
BmiI	GGNNCC	4 cut(s)	728, 1367, 1368, 1428
BmrFI	CCNGG	7 cut(s)	363, 496, 676, 983, 1105, 1455, 1631
BmrI	ACTGGG	2 cut(s)	722, 1442
BmsI	GCATC	7 cut(s)	348, 418, 729, 796, 1383, 1571, 1699
BmtI	GCTAGC	1 cut(s)	549
BmuI	ACTGGG	2 cut(s)	722, 1442
Bpu10I	CCTNAGC	1 cut(s)	1596
Bpu14I	TTCGAA	1 cut(s)	1020
BpuMI	CCSGG	1 cut(s)	983
BsaAI	YACGTR	3 cut(s)	141, 233, 252
BsaJI	CCNNGG	2 cut(s)	1116, 1629
BsaWI	WCCGGW	1 cut(s)	723
BsaXI	ACNNNNNCTCC	2 cut(s)	236, 266
Bsc4I	CCNNNNNNNGG	5 cut(s)	628, 1110, 1387, 1499, 1636
Bse1I	ACTGG	2 cut(s)	717, 1437
BseAI	TCCGGA	1 cut(s)	723
BseBI	CCWGG	6 cut(s)	363, 496, 676, 1105, 1455, 1631
BseDI	CCNNGG	2 cut(s)	1116, 1629
BseGI	GGATG	6 cut(s)	430, 720, 1398, 1468, 1576, 1670
BseLI	CCNNNNNNNGG	5 cut(s)	628, 1110, 1387, 1499, 1636
BseMII	CTCAG	2 cut(s)	866, 1610
BseNI	ACTGG	2 cut(s)	717, 1437
BseXI	GCAGC	4 cut(s)	173, 443, 627, 1630
BseYI	CCCAGC	2 cut(s)	621, 1662
BsgI	GTGCAG	2 cut(s)	634, 1608
BshFI	GGCC	4 cut(s)	491, 946, 1158, 1641
BsiHKAI	GWGCWC	3 cut(s)	370, 769, 1687
BsiHKCI	CYCGRG	1 cut(s)	278
BsiSI	CCGG	4 cut(s)	724, 947, 983, 1559
BslFI	GGGAC	4 cut(s)	95, 1379, 1556, 1577
BslI	CCNNNNNNNGG	5 cut(s)	628, 1110, 1387, 1499, 1636
BsmAI	GTCTC	5 cut(s)	52, 318, 773, 855, 1081
BsmBI	CGTCTC	2 cut(s)	318, 773
BsmFI	GGGAC	4 cut(s)	95, 1379, 1556, 1577
BsmI	GAATGC	4 cut(s)	499, 581, 640, 732
BsnI	GGCC	4 cut(s)	491, 946, 1158, 1641
BsoBI	CYCGRG	1 cut(s)	278
Bsp119I	TTCGAA	1 cut(s)	1020
Bsp1286I	GDGCHC	3 cut(s)	370, 769, 1687
Bsp13I	TCCGGA	1 cut(s)	723
Bsp143I	GATC	2 cut(s)	855, 1555
BspACI	CCGC	7 cut(s)	167, 492, 575, 730, 1041, 1476, 1518
BspANI	GGCC	4 cut(s)	491, 946, 1158, 1641
BspCNI	CTCAG	2 cut(s)	865, 1609
BspEI	TCCGGA	1 cut(s)	723
BspHI	TCATGA	1 cut(s)	840
BspLI	GGNNCC	4 cut(s)	728, 1367, 1368, 1428
BspOI	GCTAGC	1 cut(s)	549
BspPI	GGATC	1 cut(s)	1550
BspT104I	TTCGAA	1 cut(s)	1020
BsrBI	CCGCTC	1 cut(s)	1478
BsrI	ACTGG	2 cut(s)	717, 1437
BssECI	CCNNGG	2 cut(s)	1116, 1629
BssMI	GATC	2 cut(s)	855, 1555
BssSI	CACGAG	1 cut(s)	1479
BssT1I	CCWWGG	1 cut(s)	1116
Bst2BI	CACGAG	1 cut(s)	1479
Bst2UI	CCWGG	6 cut(s)	363, 496, 676, 1105, 1455, 1631
Bst4CI	ACNGT	5 cut(s)	116, 208, 1191, 1375, 1607
BstAPI	GCANNNNNTGC	1 cut(s)	1184
BstBAI	YACGTR	3 cut(s)	141, 233, 252
BstBI	TTCGAA	1 cut(s)	1020
BstC8I	GCNNGC	6 cut(s)	547, 638, 811, 815, 1225, 1623
BstDEI	CTNAG	3 cut(s)	852, 1596, 1707
BstENI	CCTNNNNNAGG	1 cut(s)	1634
BstF5I	GGATG	6 cut(s)	430, 720, 1398, 1468, 1576, 1670
BstHHI	GCGC	3 cut(s)	110, 720, 1446
BstKTI	GATC	2 cut(s)	858, 1558
BstMAI	GTCTC	5 cut(s)	52, 318, 773, 855, 1081
BstMBI	GATC	2 cut(s)	855, 1555
BstMWI	GCNNNNNNNGC	6 cut(s)	39, 542, 1184, 1220, 1443, 1559
BstNI	CCWGG	6 cut(s)	363, 496, 676, 1105, 1455, 1631
BstNSI	RCATGY	4 cut(s)	640, 813, 1227, 1452
BstSCI	CCNGG	7 cut(s)	361, 494, 674, 981, 1103, 1453, 1629
BstSFI	CTRYAG	1 cut(s)	103
BstSNI	TACGTA	1 cut(s)	252
BstV1I	GCAGC	4 cut(s)	173, 443, 627, 1630
BstX2I	RGATCY	1 cut(s)	855
BstYI	RGATCY	1 cut(s)	855
BsuI	GTATCC	2 cut(s)	241, 1387
BsuRI	GGCC	4 cut(s)	491, 946, 1158, 1641
BtsCI	GGATG	6 cut(s)	430, 720, 1398, 1468, 1576, 1670
BtsIMutI	CAGTG	3 cut(s)	710, 1415, 1430
Cac8I	GCNNGC	6 cut(s)	547, 638, 811, 815, 1225, 1623
CaiI	CAGNNNCTG	1 cut(s)	1553
CciI	TCATGA	1 cut(s)	840
CfoI	GCGC	3 cut(s)	110, 720, 1446
Cfr13I	GGNCC	4 cut(s)	1113, 1156, 1366, 1639
CseI	GACGC	2 cut(s)	790, 1579
Csp6I	GTAC	6 cut(s)	142, 253, 670, 775, 1383, 1508
CviQI	GTAC	6 cut(s)	142, 253, 670, 775, 1383, 1508
DdeI	CTNAG	3 cut(s)	852, 1596, 1707
DpnI	GATC	2 cut(s)	857, 1557
DpnII	GATC	2 cut(s)	855, 1555
DraIII	CACNNNGTG	1 cut(s)	1682
DrdI	GACNNNNNNGTC	2 cut(s)	332, 836
DseDI	GACNNNNNNGTC	2 cut(s)	332, 836
EciI	GGCGGA	1 cut(s)	590
Ecl136II	GAGCTC	1 cut(s)	368
Eco105I	TACGTA	1 cut(s)	252
Eco130I	CCWWGG	1 cut(s)	1116
Eco24I	GRGCYC	1 cut(s)	370
Eco32I	GATATC	2 cut(s)	1085, 1101
Eco47I	GGWCC	2 cut(s)	1113, 1366
Eco53kI	GAGCTC	1 cut(s)	368
Eco57I	CTGAAG	2 cut(s)	571, 1172
Eco88I	CYCGRG	1 cut(s)	278
EcoICRI	GAGCTC	1 cut(s)	368
EcoNI	CCTNNNNNAGG	1 cut(s)	1634
EcoO109I	RGGNCCY	1 cut(s)	1366
EcoRI	GAATTC	2 cut(s)	1032, 1304
EcoRII	CCWGG	6 cut(s)	361, 494, 674, 1103, 1453, 1629
EcoRV	GATATC	2 cut(s)	1085, 1101
EcoT14I	CCWWGG	1 cut(s)	1116
EcoT22I	ATGCAT	3 cut(s)	538, 642, 811
EcoT38I	GRGCYC	1 cut(s)	370
ErhI	CCWWGG	1 cut(s)	1116
Esp3I	CGTCTC	2 cut(s)	318, 773
FaqI	GGGAC	4 cut(s)	95, 1379, 1556, 1577
FauI	CCCGC	2 cut(s)	1483, 1525
FauNDI	CATATG	1 cut(s)	257
FblI	GTMKAC	1 cut(s)	514
Fnu4HI	GCNGC	6 cut(s)	167, 187, 432, 492, 616, 1619
FokI	GGATG	6 cut(s)	437, 707, 1405, 1475, 1563, 1657
FriOI	GRGCYC	1 cut(s)	370
Fsp4HI	GCNGC	6 cut(s)	167, 187, 432, 492, 616, 1619
FspAI	RTGCGCAY	1 cut(s)	1445
FspBI	CTAG	3 cut(s)	62, 546, 1080
FspI	TGCGCA	1 cut(s)	1445
GlaI	GCGC	3 cut(s)	109, 719, 1445
GluI	GCNGC	6 cut(s)	167, 187, 432, 492, 616, 1619
GsaI	CCCAGC	2 cut(s)	625, 1666
HaeIII	GGCC	4 cut(s)	491, 946, 1158, 1641
HapII	CCGG	4 cut(s)	724, 947, 983, 1559
HgaI	GACGC	2 cut(s)	790, 1579
HhaI	GCGC	3 cut(s)	110, 720, 1446
Hin6I	GCGC	3 cut(s)	108, 718, 1444
HinP1I	GCGC	3 cut(s)	108, 718, 1444
HinfI	GANTC	8 cut(s)	14, 281, 329, 911, 1022, 1254, 1523, 1702
HpaII	CCGG	4 cut(s)	724, 947, 983, 1559
HphI	GGTGA	3 cut(s)	128, 491, 1505
Hpy166II	GTNNAC	6 cut(s)	515, 672, 775, 822, 1113, 1539
Hpy188III	TCNNGA	7 cut(s)	268, 278, 724, 841, 1080, 1460, 1481
Hpy8I	GTNNAC	6 cut(s)	515, 672, 775, 822, 1113, 1539
HpyAV	CCTTC	9 cut(s)	47, 235, 415, 626, 907, 1147, 1244, 1503, 1660
HpyCH4III	ACNGT	5 cut(s)	116, 208, 1191, 1375, 1607
HpyCH4IV	ACGT	5 cut(s)	140, 232, 251, 1356, 1440
HpyF10VI	GCNNNNNNNGC	6 cut(s)	39, 542, 1184, 1220, 1443, 1559
HpyF3I	CTNAG	3 cut(s)	852, 1596, 1707
HpySE526I	ACGT	5 cut(s)	140, 232, 251, 1356, 1440
HspAI	GCGC	3 cut(s)	108, 718, 1444
KflI	GGGWCCC	1 cut(s)	1366
Kpn2I	TCCGGA	1 cut(s)	723
Kzo9I	GATC	2 cut(s)	855, 1555
LmnI	GCTCC	3 cut(s)	365, 883, 1477
Lsp1109I	GCAGC	4 cut(s)	173, 443, 627, 1630
LweI	GCATC	7 cut(s)	348, 418, 729, 796, 1383, 1571, 1699
MaeI	CTAG	3 cut(s)	62, 546, 1080
MaeII	ACGT	5 cut(s)	140, 232, 251, 1356, 1440
MaeIII	GTNAC	2 cut(s)	371, 1043
MalI	GATC	2 cut(s)	857, 1557
MbiI	CCGCTC	1 cut(s)	1478
MboI	GATC	2 cut(s)	855, 1555
MboII	GAAGA	5 cut(s)	62, 411, 577, 815, 1496
MflI	RGATCY	1 cut(s)	855
MhlI	GDGCHC	3 cut(s)	370, 769, 1687
MluCI	AATT	6 cut(s)	271, 1013, 1032, 1231, 1274, 1304
MlyI	GAGTC	4 cut(s)	23, 290, 338, 905
Mph1103I	ATGCAT	3 cut(s)	538, 642, 811
MroI	TCCGGA	1 cut(s)	723
MseI	TTAA	1 cut(s)	846
MslI	CAYNNNNRTG	1 cut(s)	260
MspI	CCGG	4 cut(s)	724, 947, 983, 1559
MspR9I	CCNGG	7 cut(s)	363, 496, 676, 983, 1105, 1455, 1631
Mva1269I	GAATGC	4 cut(s)	499, 581, 640, 732
MvaI	CCWGG	6 cut(s)	363, 496, 676, 1105, 1455, 1631
MwoI	GCNNNNNNNGC	6 cut(s)	39, 542, 1184, 1220, 1443, 1559
NciI	CCSGG	1 cut(s)	983
NdeI	CATATG	1 cut(s)	257
NdeII	GATC	2 cut(s)	855, 1555
NheI	GCTAGC	1 cut(s)	545
NlaIV	GGNNCC	4 cut(s)	728, 1367, 1368, 1428
NmuCI	GTSAC	2 cut(s)	371, 1043
NsbI	TGCGCA	1 cut(s)	1445
NsiI	ATGCAT	3 cut(s)	538, 642, 811
NspI	RCATGY	4 cut(s)	640, 813, 1227, 1452
NspV	TTCGAA	1 cut(s)	1020
PaeI	GCATGC	3 cut(s)	640, 813, 1227
PaeR7I	CTCGAG	1 cut(s)	278
PagI	TCATGA	1 cut(s)	840
PciI	ACATGT	1 cut(s)	1448
PctI	GAATGC	4 cut(s)	499, 581, 640, 732
PfeI	GAWTC	4 cut(s)	1022, 1254, 1523, 1702
PflMI	CCANNNNNTGG	2 cut(s)	628, 1110
PkrI	GCNGC	6 cut(s)	168, 188, 433, 493, 617, 1620
PleI	GAGTC	4 cut(s)	22, 289, 337, 905
PpsI	GAGTC	4 cut(s)	22, 289, 337, 905
Ppu21I	YACGTR	3 cut(s)	141, 233, 252
PpuMI	RGGWCCY	1 cut(s)	1366
PscI	ACATGT	1 cut(s)	1448
Psp124BI	GAGCTC	1 cut(s)	370
Psp1406I	AACGTT	1 cut(s)	1356
Psp5II	RGGWCCY	1 cut(s)	1366
Psp6I	CCWGG	6 cut(s)	361, 494, 674, 1103, 1453, 1629
PspFI	CCCAGC	2 cut(s)	621, 1662
PspGI	CCWGG	6 cut(s)	361, 494, 674, 1103, 1453, 1629
PspN4I	GGNNCC	4 cut(s)	728, 1367, 1368, 1428
PspPI	GGNCC	4 cut(s)	1113, 1156, 1366, 1639
PspPPI	RGGWCCY	1 cut(s)	1366
PstNI	CAGNNNCTG	1 cut(s)	1553
PsuI	RGATCY	1 cut(s)	855
RsaI	GTAC	6 cut(s)	143, 254, 671, 776, 1384, 1509
RsaNI	GTAC	6 cut(s)	142, 253, 670, 775, 1383, 1508
RseI	CAYNNNNRTG	1 cut(s)	260
SacI	GAGCTC	1 cut(s)	370
SaqAI	TTAA	1 cut(s)	846
SatI	GCNGC	6 cut(s)	167, 187, 432, 492, 616, 1619
Sau3AI	GATC	2 cut(s)	855, 1555
Sau96I	GGNCC	4 cut(s)	1113, 1156, 1366, 1639
SchI	GAGTC	4 cut(s)	23, 290, 338, 905
ScrFI	CCNGG	7 cut(s)	363, 496, 676, 983, 1105, 1455, 1631
SduI	GDGCHC	3 cut(s)	370, 769, 1687
SfaNI	GCATC	7 cut(s)	348, 418, 729, 796, 1383, 1571, 1699
SfcI	CTRYAG	1 cut(s)	103
Sfr274I	CTCGAG	1 cut(s)	278
SfuI	TTCGAA	1 cut(s)	1020
SinI	GGWCC	2 cut(s)	1113, 1366
SlaI	CTCGAG	1 cut(s)	278
SmiMI	CAYNNNNRTG	1 cut(s)	260
SmlI	CTYRAG	1 cut(s)	278
SmoI	CTYRAG	1 cut(s)	278
SnaBI	TACGTA	1 cut(s)	252
SphI	GCATGC	3 cut(s)	640, 813, 1227
Sse9I	AATT	6 cut(s)	271, 1013, 1032, 1231, 1274, 1304
SsiI	CCGC	7 cut(s)	167, 492, 575, 730, 1041, 1476, 1518
SspI	AATATT	1 cut(s)	904
SspMI	CTAG	3 cut(s)	62, 546, 1080
SstI	GAGCTC	1 cut(s)	370
StyD4I	CCNGG	7 cut(s)	361, 494, 674, 981, 1103, 1453, 1629
StyI	CCWWGG	1 cut(s)	1116
TaaI	ACNGT	5 cut(s)	116, 208, 1191, 1375, 1607
TaiI	ACGT	5 cut(s)	143, 235, 254, 1359, 1443
TaqI	TCGA	5 cut(s)	279, 755, 1020, 1217, 1287
TaqII	GACCGA	1 cut(s)	322
TasI	AATT	6 cut(s)	271, 1013, 1032, 1231, 1274, 1304
TauI	GCSGC	2 cut(s)	169, 494
TfiI	GAWTC	4 cut(s)	1022, 1254, 1523, 1702
Tru1I	TTAA	1 cut(s)	846
Tru9I	TTAA	1 cut(s)	846
TscAI	CASTG	3 cut(s)	717, 1422, 1437
TseFI	GTSAC	2 cut(s)	371, 1043
TseI	GCWGC	4 cut(s)	186, 431, 615, 1618
Tsp45I	GTSAC	2 cut(s)	371, 1043
TspDTI	ATGAA	4 cut(s)	302, 1305, 1479, 1599
TspGWI	ACGGA	7 cut(s)	59, 336, 962, 967, 1044, 1298, 1340
TspRI	CASTG	3 cut(s)	717, 1422, 1437
Van91I	CCANNNNNTGG	2 cut(s)	628, 1110
VpaK11BI	GGWCC	2 cut(s)	1113, 1366
XagI	CCTNNNNNAGG	1 cut(s)	1634
XapI	RAATTY	4 cut(s)	271, 1032, 1274, 1304
XbaI	TCTAGA	1 cut(s)	1079
XceI	RCATGY	4 cut(s)	640, 813, 1227, 1452
XhoI	CTCGAG	1 cut(s)	278
XmiI	GTMKAC	1 cut(s)	514
XspI	CTAG	3 cut(s)	62, 546, 1080
Zsp2I	ATGCAT	3 cut(s)	538, 642, 811

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.