pycom13g04730

F-box FBD LRR-repeat protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Reverse (-)
3144296 .. 3146307
2012 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g04730.4

Sequence Viewer

Length: 1344 bp
ATGAGGCGTGCTCGAAAGTCTAATCCTTCCCCACAGCCCACTGTGCTTTGTAGTCGATTGAGTTGGAATACAGAACAAATGGGCGATTTTTCGGGTTGTGATTCGATAAGCAATTTGCCTCAGGCCATTATAGAGAGCATTCTCACGCGTCTGCCAATAAGAGATGCTGTAAGAACTAGCTGTTTATCAACGAAATGGAGATACAAATGGACTACTATCACTCATCTTTCATTCGACGAAAAATGTGTCACTCTATCAAATGACCGAGCTCTTGTTGAAAAAAGCCTCATACGTTTTATTACTCGGGCACTCTTTCTTCACCAAGGACCCATTCACAAGTTCCAGCTTAAGACTTCATACTTGCAGAGCTGCCCGGATATAGATCGATGGATACTTTTTCTTTCAAGGAAAGATATCAAAGAACTGGTTCTTGAGTTGGGGGAAGGTGAGTGGTTTAGGGTGCCTTCGTGCCTTTTTTATTGTAAAAAATTGACCCGTTTGGAGCTATTTCGCTGCGAGTTGGATCCGCCTCCTGCTTTTAAAGGATTTTTGTGTTTGAAGGGCCTCAATCTTCATCAGGTTTTGGTTACTCCTGATGCAATTGAAAGTCTTATTTCCAGTTGCCCGCTACTTGAGAGTCTGGCTTTGTCATACTCTGATAGCTTAGCTCTAAACATCCGCGCTCCAAATCTCAGATACTTGTGTCTTGAAGGCGAATTTAAGGATATCTGTCTTGAAAATACGCCGCTTTTGGTTGCCATATCTGTTGCCATGTATATGACTGACGACATTGCTGAGCACTTTGAGCAAAGTTCAAATTGCAATTTTGTCAAGTTTCTTGGTGGCATTCCACTTCTTGAGAGGCTTGTTGGGCATATCTACTTTACAAAGTATTTGAGTATAGGTAATGACCTAGGAATTCTTCCAATTACTTACAACCGTTTAAAGATTATCGAATTATATCAAGTAAGTTTCGAAGATATGAAAGAGATACTAGTTGTTCTTCGCTTGATTACGAGCGCTCCCAACTTAAAGGAACTTCAAATCTCGGGATCTTCAAATACTTTAGCAGCAATAGAAGCGACCGACTTGGATTTCTGGGAGAAACAATGCCCTTCCGACTGCACATTCCGAAGGCTTAAAGTTGTGAAGATGACAGATATGTCCGGAGTGCCACACGAGATGGAATTCATGAAATTTCTATTGAAGAAATCACCCGTGCTTGAGACGATGAGCGTTACGCCTTGCGCGTATGTTTTGGAAGGACGGTTGAATATGTTGATTGAGTTGGCGAGGTTTAAACGGGCATCTCCGGAAGCAGAAGTTATCTTCATCCAAGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

448

Amino Acids

51.08

Weight (kDa)

7.01

Isoelectric Point (pI)

49.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1162
AccB1I GGYRCC 1 cut(s) 460
AccII CGCG 3 cut(s) 148, 681, 1250
AccIII TCCGGA 2 cut(s) 1166, 1312
AciI CCGC 4 cut(s) 527, 626, 679, 746
AclWI GGATC 3 cut(s) 518, 531, 1060
AcsI RAATTY 4 cut(s) 716, 918, 1187, 1196
AfeI AGCGCT 1 cut(s) 1021
AflII CTTAAG 1 cut(s) 347
AflIII ACRYGT 1 cut(s) 146
AhlI ACTAGT 1 cut(s) 994
AjuI GAANNNNNNNTTGG 2 cut(s) 315, 347
AluBI AGCT 7 cut(s) 180, 269, 346, 369, 505, 663, 668
AluI AGCT 7 cut(s) 180, 269, 346, 369, 505, 663, 668
Alw21I GWGCWC 3 cut(s) 13, 271, 801
Alw26I GTCTC 1 cut(s) 1220
AlwI GGATC 3 cut(s) 518, 531, 1060
Ama87I CYCGRG 2 cut(s) 303, 1048
Aor13HI TCCGGA 2 cut(s) 1166, 1312
Aor51HI AGCGCT 1 cut(s) 1021
AoxI GGCC 2 cut(s) 123, 562
ApeKI GCWGC 3 cut(s) 369, 513, 1070
ApoI RAATTY 4 cut(s) 716, 918, 1187, 1196
ArsI GACNNNNNNTTYG 2 cut(s) 231, 263
Asp700I GAANNNNTTC 1 cut(s) 426
AspA2I CCTAGG 1 cut(s) 913
AspLEI GCGC 3 cut(s) 683, 1022, 1250
AspS9I GGNCC 2 cut(s) 326, 562
AsuC2I CCSGG 1 cut(s) 374
AsuHPI GGTGA 3 cut(s) 311, 458, 1206
AsuII TTCGAA 1 cut(s) 975
AvaI CYCGRG 2 cut(s) 303, 1048
AvaII GGWCC 1 cut(s) 326
AvrII CCTAGG 1 cut(s) 913
AxyI CCTNAGG 1 cut(s) 120
BaeGI GKGCMC 1 cut(s) 310
BaeI ACNNNNGTAYC 2 cut(s) 688, 721
BamHI GGATCC 1 cut(s) 523
BanI GGYRCC 1 cut(s) 460
BanII GRGCYC 1 cut(s) 271
BauI CACGAG 1 cut(s) 1178
Bbv12I GWGCWC 3 cut(s) 13, 271, 801
BbvI GCAGC 3 cut(s) 356, 500, 1082
BccI CCATC 2 cut(s) 381, 1177
BciVI GTATCC 1 cut(s) 384
BcnI CCSGG 1 cut(s) 374
BcoDI GTCTC 1 cut(s) 1220
BcuI ACTAGT 1 cut(s) 994
BfaI CTAG 3 cut(s) 177, 914, 995
BfoI RGCGCY 1 cut(s) 1023
BfrI CTTAAG 1 cut(s) 347
BfuI GTATCC 1 cut(s) 384
BisI GCNGC 4 cut(s) 370, 514, 746, 1071
BlnI CCTAGG 1 cut(s) 913
BlpI GCTNAGC 2 cut(s) 664, 795
BlsI GCNGC 4 cut(s) 371, 515, 747, 1072
Bme1390I CCNGG 1 cut(s) 374
Bme18I GGWCC 1 cut(s) 326
BmeT110I CYCGRG 2 cut(s) 303, 1048
BmgT120I GGNCC 2 cut(s) 326, 562
BmiI GGNNCC 3 cut(s) 328, 462, 525
BmrFI CCNGG 1 cut(s) 374
BmsI GCATC 3 cut(s) 154, 586, 1316
BplI GAGNNNNNCTC 1 cut(s) 27
Bpu1102I GCTNAGC 2 cut(s) 664, 795
Bpu14I TTCGAA 1 cut(s) 975
BpuEI CTTGAG 4 cut(s) 452, 653, 878, 1244
BpuMI CCSGG 1 cut(s) 374
Bsa29I ATCGAT 1 cut(s) 385
BsaBI GATNNNNATC 1 cut(s) 381
BsaJI CCNNGG 2 cut(s) 322, 913
BsaWI WCCGGW 2 cut(s) 1166, 1312
BsaXI ACNNNNNCTCC 2 cut(s) 1006, 1036
Bse1I ACTGG 2 cut(s) 429, 618
Bse21I CCTNAGG 1 cut(s) 120
Bse3DI GCAATG 1 cut(s) 789
Bse8I GATNNNNATC 1 cut(s) 381
BseAI TCCGGA 2 cut(s) 1166, 1312
BseCI ATCGAT 1 cut(s) 385
BseDI CCNNGG 2 cut(s) 322, 913
BseGI GGATG 2 cut(s) 675, 1332
BseJI GATNNNNATC 1 cut(s) 381
BseMI GCAATG 1 cut(s) 789
BseMII CTCAG 3 cut(s) 134, 706, 786
BseNI ACTGG 2 cut(s) 429, 618
BseSI GKGCMC 1 cut(s) 310
BseXI GCAGC 3 cut(s) 356, 500, 1082
BsgI GTGCAG 1 cut(s) 1108
Bsh1236I CGCG 3 cut(s) 148, 681, 1250
Bsh1285I CGRYCG 1 cut(s) 1086
BshFI GGCC 2 cut(s) 125, 564
BshNI GGYRCC 1 cut(s) 460
BshVI ATCGAT 1 cut(s) 385
BsiEI CGRYCG 1 cut(s) 1086
BsiHKAI GWGCWC 3 cut(s) 13, 271, 801
BsiHKCI CYCGRG 2 cut(s) 303, 1048
BsiSI CCGG 3 cut(s) 374, 1167, 1313
BsmAI GTCTC 1 cut(s) 1220
BsmBI CGTCTC 1 cut(s) 1220
BsmI GAATGC 2 cut(s) 138, 846
BsnI GGCC 2 cut(s) 125, 564
BsoBI CYCGRG 2 cut(s) 303, 1048
Bsp119I TTCGAA 1 cut(s) 975
Bsp1286I GDGCHC 4 cut(s) 13, 271, 310, 801
Bsp13I TCCGGA 2 cut(s) 1166, 1312
Bsp143I GATC 3 cut(s) 382, 523, 1052
Bsp1720I GCTNAGC 2 cut(s) 664, 795
BspACI CCGC 4 cut(s) 527, 626, 679, 746
BspANI GGCC 2 cut(s) 125, 564
BspCNI CTCAG 3 cut(s) 133, 705, 787
BspDI ATCGAT 1 cut(s) 385
BspEI TCCGGA 2 cut(s) 1166, 1312
BspFNI CGCG 3 cut(s) 148, 681, 1250
BspHI TCATGA 1 cut(s) 1191
BspLI GGNNCC 3 cut(s) 328, 462, 525
BspPI GGATC 3 cut(s) 518, 531, 1060
BspT104I TTCGAA 1 cut(s) 975
BspT107I GGYRCC 1 cut(s) 460
BspTI CTTAAG 1 cut(s) 347
BsrDI GCAATG 1 cut(s) 789
BsrI ACTGG 2 cut(s) 429, 618
BssECI CCNNGG 2 cut(s) 322, 913
BssMI GATC 3 cut(s) 382, 523, 1052
BssSI CACGAG 1 cut(s) 1178
BssT1I CCWWGG 2 cut(s) 322, 913
Bst2BI CACGAG 1 cut(s) 1178
Bst4CI ACNGT 3 cut(s) 43, 941, 1269
BstAFI CTTAAG 1 cut(s) 347
BstBI TTCGAA 1 cut(s) 975
BstC8I GCNNGC 2 cut(s) 9, 626
BstDEI CTNAG 4 cut(s) 120, 664, 692, 795
BstF5I GGATG 2 cut(s) 675, 1332
BstFNI CGCG 3 cut(s) 148, 681, 1250
BstH2I RGCGCY 1 cut(s) 1023
BstHHI GCGC 3 cut(s) 683, 1022, 1250
BstKTI GATC 3 cut(s) 385, 526, 1055
BstMAI GTCTC 1 cut(s) 1220
BstMBI GATC 3 cut(s) 382, 523, 1052
BstMCI CGRYCG 1 cut(s) 1086
BstMWI GCNNNNNNNGC 4 cut(s) 43, 805, 871, 1079
BstSCI CCNGG 1 cut(s) 372
BstSLI GKGCMC 1 cut(s) 310
BstUI CGCG 3 cut(s) 148, 681, 1250
BstV1I GCAGC 3 cut(s) 356, 500, 1082
BstX2I RGATCY 2 cut(s) 523, 1052
BstYI RGATCY 2 cut(s) 523, 1052
Bsu15I ATCGAT 1 cut(s) 385
Bsu36I CCTNAGG 1 cut(s) 120
BsuI GTATCC 1 cut(s) 384
BsuRI GGCC 2 cut(s) 125, 564
BsuTUI ATCGAT 1 cut(s) 385
BtsCI GGATG 2 cut(s) 675, 1332
BtsIMutI CAGTG 1 cut(s) 39
Cac8I GCNNGC 2 cut(s) 9, 626
CciI TCATGA 1 cut(s) 1191
CfoI GCGC 3 cut(s) 683, 1022, 1250
Cfr13I GGNCC 2 cut(s) 326, 562
ClaI ATCGAT 1 cut(s) 385
CseI GACGC 1 cut(s) 137
CviAII CATG 2 cut(s) 772, 1192
DdeI CTNAG 4 cut(s) 120, 664, 692, 795
DpnI GATC 3 cut(s) 384, 525, 1054
DpnII GATC 3 cut(s) 382, 523, 1052
DraI TTTAAA 3 cut(s) 541, 945, 1300
DrdI GACNNNNNNGTC 1 cut(s) 1162
DseDI GACNNNNNNGTC 1 cut(s) 1162
EciI GGCGGA 1 cut(s) 516
Ecl136II GAGCTC 1 cut(s) 269
Eco130I CCWWGG 2 cut(s) 322, 913
Eco24I GRGCYC 1 cut(s) 271
Eco32I GATATC 2 cut(s) 415, 727
Eco47I GGWCC 1 cut(s) 326
Eco47III AGCGCT 1 cut(s) 1021
Eco53kI GAGCTC 1 cut(s) 269
Eco81I CCTNAGG 1 cut(s) 120
Eco88I CYCGRG 2 cut(s) 303, 1048
EcoICRI GAGCTC 1 cut(s) 269
EcoO109I RGGNCCY 2 cut(s) 326, 562
EcoRI GAATTC 2 cut(s) 918, 1187
EcoRV GATATC 2 cut(s) 415, 727
EcoT14I CCWWGG 2 cut(s) 322, 913
EcoT38I GRGCYC 1 cut(s) 271
ErhI CCWWGG 2 cut(s) 322, 913
Esp3I CGTCTC 1 cut(s) 1220
FaeI CATG 2 cut(s) 775, 1195
FatI CATG 2 cut(s) 771, 1191
FauI CCCGC 1 cut(s) 633
Fnu4HI GCNGC 4 cut(s) 370, 514, 746, 1071
FokI GGATG 2 cut(s) 662, 1319
FriOI GRGCYC 1 cut(s) 271
Fsp4HI GCNGC 4 cut(s) 370, 514, 746, 1071
FspBI CTAG 3 cut(s) 177, 914, 995
GlaI GCGC 3 cut(s) 682, 1021, 1249
GluI GCNGC 4 cut(s) 370, 514, 746, 1071
HaeII RGCGCY 1 cut(s) 1023
HaeIII GGCC 2 cut(s) 125, 564
HapII CCGG 3 cut(s) 374, 1167, 1313
HgaI GACGC 1 cut(s) 137
HhaI GCGC 3 cut(s) 683, 1022, 1250
Hin1II CATG 2 cut(s) 775, 1195
Hin6I GCGC 3 cut(s) 681, 1020, 1248
HinP1I GCGC 3 cut(s) 681, 1020, 1248
HinfI GANTC 2 cut(s) 101, 637
HpaII CCGG 3 cut(s) 374, 1167, 1313
HphI GGTGA 3 cut(s) 311, 458, 1206
Hpy188I TCNGA 4 cut(s) 658, 695, 1120, 1133
Hpy188III TCNNGA 9 cut(s) 431, 593, 707, 734, 857, 1050, 1167, 1192, 1313
Hpy99I CGWCG 1 cut(s) 239
HpyAV CCTTC 8 cut(s) 36, 437, 474, 553, 704, 1125, 1128, 1256
HpyCH4III ACNGT 3 cut(s) 43, 941, 1269
HpyCH4IV ACGT 1 cut(s) 292
HpyCH4V TGCA 4 cut(s) 364, 599, 822, 1125
HpyF10VI GCNNNNNNNGC 4 cut(s) 43, 805, 871, 1079
HpyF3I CTNAG 4 cut(s) 120, 664, 692, 795
HpySE526I ACGT 1 cut(s) 292
Hsp92II CATG 2 cut(s) 775, 1195
HspAI GCGC 3 cut(s) 681, 1020, 1248
Kpn2I TCCGGA 2 cut(s) 1166, 1312
Kzo9I GATC 3 cut(s) 382, 523, 1052
LmnI GCTCC 3 cut(s) 502, 688, 1027
Lsp1109I GCAGC 3 cut(s) 356, 500, 1082
LweI GCATC 3 cut(s) 154, 586, 1316
MaeI CTAG 3 cut(s) 177, 914, 995
MaeII ACGT 1 cut(s) 292
MaeIII GTNAC 3 cut(s) 247, 586, 1237
MalI GATC 3 cut(s) 384, 525, 1054
MboI GATC 3 cut(s) 382, 523, 1052
MboII GAAGA 9 cut(s) 308, 563, 914, 989, 995, 1047, 1162, 1219, 1321
MfeI CAATTG 1 cut(s) 600
MflI RGATCY 2 cut(s) 523, 1052
MhlI GDGCHC 4 cut(s) 13, 271, 310, 801
MluI ACGCGT 1 cut(s) 146
MlyI GAGTC 1 cut(s) 646
MmeI TCCRAC 3 cut(s) 44, 501, 1143
MnlI CCTC 6 cut(s) 129, 296, 540, 575, 855, 1287
MroI TCCGGA 2 cut(s) 1166, 1312
MroXI GAANNNNTTC 1 cut(s) 426
MseI TTAA 7 cut(s) 348, 540, 720, 944, 1031, 1140, 1299
MslI CAYNNNNRTG 1 cut(s) 776
MspCI CTTAAG 1 cut(s) 347
MspI CCGG 3 cut(s) 374, 1167, 1313
MspR9I CCNGG 1 cut(s) 374
MssI GTTTAAAC 1 cut(s) 1300
MunI CAATTG 1 cut(s) 600
Mva1269I GAATGC 2 cut(s) 138, 846
MvnI CGCG 3 cut(s) 148, 681, 1250
MwoI GCNNNNNNNGC 4 cut(s) 43, 805, 871, 1079
NciI CCSGG 1 cut(s) 374
NdeII GATC 3 cut(s) 382, 523, 1052
NlaIII CATG 2 cut(s) 775, 1195
NlaIV GGNNCC 3 cut(s) 328, 462, 525
NmuCI GTSAC 1 cut(s) 247
NspV TTCGAA 1 cut(s) 975
PagI TCATGA 1 cut(s) 1191
PcsI WCGNNNNNNNCGW 1 cut(s) 1247
PctI GAATGC 2 cut(s) 138, 846
PdmI GAANNNNTTC 1 cut(s) 426
PfeI GAWTC 1 cut(s) 101
PkrI GCNGC 4 cut(s) 371, 515, 747, 1072
PleI GAGTC 1 cut(s) 645
PmeI GTTTAAAC 1 cut(s) 1300
PpsI GAGTC 1 cut(s) 645
PpuMI RGGWCCY 1 cut(s) 326
Psp124BI GAGCTC 1 cut(s) 271
Psp5II RGGWCCY 1 cut(s) 326
PspN4I GGNNCC 3 cut(s) 328, 462, 525
PspPI GGNCC 2 cut(s) 326, 562
PspPPI RGGWCCY 1 cut(s) 326
PsuI RGATCY 2 cut(s) 523, 1052
RseI CAYNNNNRTG 1 cut(s) 776
SacI GAGCTC 1 cut(s) 271
SaqAI TTAA 7 cut(s) 348, 540, 720, 944, 1031, 1140, 1299
SatI GCNGC 4 cut(s) 370, 514, 746, 1071
Sau3AI GATC 3 cut(s) 382, 523, 1052
Sau96I GGNCC 2 cut(s) 326, 562
SchI GAGTC 1 cut(s) 646
ScrFI CCNGG 1 cut(s) 374
SduI GDGCHC 4 cut(s) 13, 271, 310, 801
SfaNI GCATC 3 cut(s) 154, 586, 1316
SfuI TTCGAA 1 cut(s) 975
SinI GGWCC 1 cut(s) 326
SmiMI CAYNNNNRTG 1 cut(s) 776
SmlI CTYRAG 5 cut(s) 347, 431, 632, 857, 1223
SmoI CTYRAG 5 cut(s) 347, 431, 632, 857, 1223
SpeI ACTAGT 1 cut(s) 994
SsiI CCGC 4 cut(s) 527, 626, 679, 746
SspMI CTAG 3 cut(s) 177, 914, 995
SstI GAGCTC 1 cut(s) 271
StyD4I CCNGG 1 cut(s) 372
StyI CCWWGG 2 cut(s) 322, 913
TaaI ACNGT 3 cut(s) 43, 941, 1269
TaiI ACGT 1 cut(s) 295
TaqI TCGA 7 cut(s) 13, 55, 104, 234, 385, 954, 975
TaqII GACCGA 2 cut(s) 279, 1100
TauI GCSGC 1 cut(s) 748
TfiI GAWTC 1 cut(s) 101
Tru1I TTAA 7 cut(s) 348, 540, 720, 944, 1031, 1140, 1299
Tru9I TTAA 7 cut(s) 348, 540, 720, 944, 1031, 1140, 1299
TscAI CASTG 1 cut(s) 46
TseFI GTSAC 1 cut(s) 247
TseI GCWGC 3 cut(s) 369, 513, 1070
Tsp45I GTSAC 1 cut(s) 247
TspDTI ATGAA 7 cut(s) 219, 345, 563, 998, 1180, 1208, 1321
TspRI CASTG 1 cut(s) 46
Vha464I CTTAAG 1 cut(s) 347
VpaK11BI GGWCC 1 cut(s) 326
XapI RAATTY 4 cut(s) 716, 918, 1187, 1196
XmaJI CCTAGG 1 cut(s) 913
XmnI GAANNNNTTC 1 cut(s) 426
XspI CTAG 3 cut(s) 177, 914, 995
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.