Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0004751

Physical Location & Seq

Genomic Coordinates Reverse (-)

9319412 .. 9322843

Gene Structure 3432 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom13g13160.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1920 bp

ATGCACCTTCTCTCTTCTCCCTCCTCCTCCAACCCCCCCAACTTCTCTCTCTTCTCCGCCTCCCAAACCCCTAACCCCCTCTCCAAATTCACCTTCCGGATCCCCACTTTGCCCCTCCACTCCTCCTCCTATTCCCTCCCTGCCCCTCCGCCTCCCCGCTGCTCTTCCCGGGACTCCCCTACCCCAGTCCTCGACCCGTTCCCCGTAAACGCCACCGTTTCGACCGAGAGCCAGAGTAATGACGTCCCTCCGGAGACAGAGTCCGCGAAACGTGAGCTCGTGGTTCGCCGGCCGGCGATGGAGGTCTCCGGCGAGGGAGATGCTGGCGGTGCGGCAACTACTGTCCTCGACGCAGGGCTTGCCGAGCTGGCGAAGAAGATGCCGATATTCGAGCCGGAGGCTGCGGAGTCGGGCGTGAAGGAGAAGCCGTTGGCGGTGAACTTGGACTTGGCGTTATACAGAGCTAAGATCTTGACGAGGAACTTCCGGTACGCGGAAGCGGAGCAGATACTTGAGAAGTGTATATATTATTGGCCGGAAGATGGGAGAGCTTATGTGGCATTGGGGAAGGCGTTGAGCAAACAATCGAAGACTGCGGAAGCTCGAGCTGTGTATGAGAAAGGGTGCCAAGCTACTCAAGGAGAGAATCCATACATTTGGCAGTGCTGGGCTGTTTTGGAAACTAAGATGGGAAACGTAAGAAGGGCTAGAGAATTATTTGATGCAGCCACGGTTGCTGATAAGAAACACATTGCTGCCTGGCATGGGTGGGGAGTTCTAGAGCTAAAGCAGGGAAATATCAAAAAGGCAAGGCATCTGCTTGCTAAAGGTCTAAAATTTTGTGGCGGGAATGAGTACGTATATCAGACACTTGCATTGCTGGAAGCTAAAGCAAATCGCTATGAGCAGGCTCGGTATTTGTTCAGCCAGGCTACTAGGTGCAATCCCAAAAGCTGTGCCAGTTGGCTTGTAAGTCATCATTTTCTTGCACACAGGCTTCTCAGTTACAAATTGGAGATGCAACAAGAAAACAATCGTGCTGCCAGGCAACTCTTCGAGAAATCGATACAGGCAAGCCCCAAGAATAGGTTTGCATGGCACGTTTGGGGAATGTTTGAAATTAATATAGGTAATGTTGACAAGGCAAGAAAGCTTTTAAAGATTGGTCATGCACTCAATCCAAGGGATCCAGTTCTCCTTCAGTCCCTTGCTTTATTGGAATATAAAAACTCAACCGCGAATCTTGCTCGGCAGTTGTTCAGGAGAGCATCTGAGTTGGATCCAAGGCATCAACCAGTGTGGACGGCTTGGGGGTGGATGGAATGGAAAGAAGGAAACATAGAGACAGCAAGGAAATTGTATCAAAAAGCGTTGTCTATTAACTCAACTAGTGAAACTGCTGCTCGTTGCCTACAGGCTTGGGGAGTTCTAGAACAGAGAGTTGGTAACCTATCAGCCGCCAGGAGATTATTTAGGTCCTCCCTTAATATAAATTCTCAGAGTTATGTCACATGGATGACATGGGCATCATTAGAGGAAAATCAAGGAAACGCTGTACGGGCAGAAGAAATTCGCGACCTCTATTTCCAACAGCGTACTGAAGTTGTAGATGATGCTTCATGGGTTATGGGATTCTTAGACATCATAGATCCGGCCCTTGAACGTATAAAGAATATCTTGAGGTTGGACCAGAGTTCAAAAGAAATGCAACAGGACGCTCTGCGAACAATAGTTGGAGCAAATGAAAGTAACATCGATGAAGAACCAATCAGCCCTTCCTCTAATAGCAATGACATGGAAAGCGAGAGTGGGTTTGATGTGGATGCATTTGTTAAGGAAAAGTTATCTCTAGACCCATCAAAGCTAGAAGTTCAGATGGTGACCTCGCGACCTTTTCCGGTAAACAGAAGTAGAGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006139 GO:0006396 GO:0006397 GO:0006417 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009639 GO:0009657 GO:0009889 GO:0009892 GO:0009941 GO:0009987 GO:0010114 GO:0010467 GO:0010468 GO:0010556 GO:0010605 GO:0010608 GO:0016020 GO:0016043 GO:0016070 GO:0016071 GO:0019219 GO:0019222 GO:0031090 GO:0031323 GO:0031324 GO:0031326 GO:0031967 GO:0031969 GO:0031975 GO:0032069 GO:0032074 GO:0032268 GO:0034248 GO:0034641 GO:0042170 GO:0043086 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043621 GO:0044092 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051246 GO:0051252 GO:0051253 GO:0051336 GO:0051346 GO:0060255 GO:0060700 GO:0060701 GO:0065007 GO:0065009 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0098588 GO:0098805 GO:1901360 GO:1901363 GO:1901917 GO:1901918 GO:1905777 GO:1905778 GO:2000112

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_16 TPR_8

Protein Analysis

640

Amino Acids

71.89

Weight (kDa)

8.77

Isoelectric Point (pI)

51.18

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004751)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G17040 AT3G17040 AT3G17040 AT3G17040
fragaria_vesca	FvH4_4g19660 FvH4_4g19660 FvH4_4g19660 FvH4_4g19660 FvH4_4g19660 FvH4_4g19660
malus_domestica	MD13G1154800.v1.1
prunus_persica	Prupe.1G117800_v2.0.a1 Prupe.1G117800_v2.0.a1
pyrus_communis	pycom13g13160
rosa_chinensis	RchiOBHm_Chr4g0425111
rosa_laevigata	RLG00000007402
rosa_multiflora	Rmu_ssc0000420.1_g000027
rosa_roxburghii	Rroxscaffold_1G00031740 Rroxscaffold_5G00367180
rosa_rugosa	Rorug01G0106900 Rorug04G0201600 Rorug04G0201700
rosa_samantha	Rh1AG082100 Rh1BG099300 Rh4AG258300 Rh4BG263900 Rh4CG275000 Rh4DG259800
rosa_wichuraiana	Rw0G003480 Rw1G016170 Rw4G022330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	246
AccB1I	GGYRCC	1 cut(s)	624
AccII	CGCG	5 cut(s)	266, 494, 1238, 1575, 1888
AccIII	TCCGGA	2 cut(s)	96, 250
AclWI	GGATC	7 cut(s)	94, 107, 1181, 1194, 1274, 1287, 1643
AcoI	YGGCCR	2 cut(s)	290, 533
AcsI	RAATTY	4 cut(s)	86, 836, 1492, 1569
AcuI	CTGAAG	2 cut(s)	1184, 1620
AcyI	GRCGYC	1 cut(s)	243
AfaI	GTAC	4 cut(s)	491, 857, 1557, 1597
AfiI	CCNNNNNNNGG	4 cut(s)	493, 542, 765, 1086
AgsI	TTSAA	3 cut(s)	1118, 1661, 1698
AhlI	ACTAGT	1 cut(s)	1388
AjnI	CCWGG	4 cut(s)	758, 927, 1043, 1460
AjuI	GAANNNNNNNTTGG	8 cut(s)	77, 109, 431, 463, 1425, 1457, 1759, 1791
Alw21I	GWGCWC	1 cut(s)	279
Alw26I	GTCTC	3 cut(s)	248, 310, 1337
AlwI	GGATC	7 cut(s)	94, 107, 1181, 1194, 1274, 1287, 1643
Ama87I	CYCGRG	2 cut(s)	168, 603
Aor13HI	TCCGGA	2 cut(s)	96, 250
AoxI	GGCC	3 cut(s)	290, 533, 1653
ApeKI	GCWGC	6 cut(s)	159, 401, 725, 755, 1040, 1400
ApoI	RAATTY	4 cut(s)	86, 836, 1492, 1569
AseI	ATTAAT	1 cut(s)	1122
Asp700I	GAANNNNTTC	1 cut(s)	1569
AspS9I	GGNCC	3 cut(s)	1476, 1654, 1687
AsuC2I	CCSGG	2 cut(s)	169, 170
AsuHPI	GGTGA	3 cut(s)	82, 448, 1891
AvaI	CYCGRG	2 cut(s)	168, 603
AvaII	GGWCC	2 cut(s)	1476, 1687
BamHI	GGATCC	3 cut(s)	99, 1186, 1279
BanI	GGYRCC	1 cut(s)	624
BanII	GRGCYC	1 cut(s)	279
BauI	CACGAG	1 cut(s)	278
BbsI	GAAGAC	1 cut(s)	596
Bbv12I	GWGCWC	1 cut(s)	279
BbvI	GCAGC	6 cut(s)	146, 388, 737, 742, 1027, 1387
BccI	CCATC	6 cut(s)	292, 536, 682, 1312, 1864, 1870
BceAI	ACGGC	2 cut(s)	412, 1320
BcgI	CGANNNNNNTGC	4 cut(s)	302, 336, 361, 395
BciT130I	CCWGG	4 cut(s)	760, 929, 1045, 1462
BcnI	CCSGG	2 cut(s)	169, 170
BcoDI	GTCTC	3 cut(s)	248, 310, 1337
BcuI	ACTAGT	1 cut(s)	1388
BfaI	CTAG	7 cut(s)	708, 779, 936, 1389, 1430, 1850, 1865
BfmI	CTRYAG	1 cut(s)	1412
BglI	GCCNNNNNGGC	1 cut(s)	368
BglII	AGATCT	1 cut(s)	468
BisI	GCNGC	8 cut(s)	160, 333, 402, 726, 756, 1041, 1401, 1458
BlsI	GCNGC	8 cut(s)	161, 334, 403, 727, 757, 1042, 1402, 1459
Bme1390I	CCNGG	6 cut(s)	169, 170, 760, 929, 1045, 1462
Bme18I	GGWCC	2 cut(s)	1476, 1687
BmeT110I	CYCGRG	2 cut(s)	168, 603
BmgT120I	GGNCC	3 cut(s)	1476, 1654, 1687
BmiI	GGNNCC	4 cut(s)	101, 626, 1188, 1281
BmrFI	CCNGG	6 cut(s)	169, 170, 760, 929, 1045, 1462
BmrI	ACTGGG	1 cut(s)	179
BmuI	ACTGGG	1 cut(s)	179
BpiI	GAAGAC	1 cut(s)	596
BpuEI	CTTGAG	3 cut(s)	533, 621, 1699
BpuMI	CCSGG	2 cut(s)	169, 170
Bsa29I	ATCGAT	2 cut(s)	1064, 1755
BsaAI	YACGTR	1 cut(s)	859
BsaHI	GRCGYC	1 cut(s)	243
BsaI	GGTCTC	1 cut(s)	310
BsaJI	CCNNGG	4 cut(s)	168, 729, 1181, 1283
BsaWI	WCCGGW	4 cut(s)	96, 250, 486, 1897
BsaXI	ACNNNNNCTCC	8 cut(s)	65, 95, 110, 140, 245, 275, 413, 443
Bsc4I	CCNNNNNNNGG	4 cut(s)	493, 542, 765, 1086
Bse118I	RCCGGY	2 cut(s)	288, 292
Bse1I	ACTGG	4 cut(s)	185, 960, 1190, 1295
Bse3DI	GCAATG	3 cut(s)	750, 875, 1795
BseAI	TCCGGA	2 cut(s)	96, 250
BseBI	CCWGG	4 cut(s)	760, 929, 1045, 1462
BseCI	ATCGAT	2 cut(s)	1064, 1755
BseDI	CCNNGG	4 cut(s)	168, 729, 1181, 1283
BseGI	GGATG	3 cut(s)	1323, 1521, 1828
BseLI	CCNNNNNNNGG	4 cut(s)	493, 542, 765, 1086
BseMI	GCAATG	3 cut(s)	750, 875, 1795
BseMII	CTCAG	3 cut(s)	1015, 1263, 1511
BseNI	ACTGG	4 cut(s)	185, 960, 1190, 1295
BseRI	GAGGAG	4 cut(s)	13, 16, 112, 115
BseX3I	CGGCCG	1 cut(s)	290
BseXI	GCAGC	6 cut(s)	146, 388, 737, 742, 1027, 1387
BseYI	CCCAGC	1 cut(s)	666
Bsh1236I	CGCG	5 cut(s)	266, 494, 1238, 1575, 1888
Bsh1285I	CGRYCG	2 cut(s)	225, 293
BshFI	GGCC	3 cut(s)	292, 535, 1655
BshNI	GGYRCC	1 cut(s)	624
BshVI	ATCGAT	2 cut(s)	1064, 1755
BsiEI	CGRYCG	2 cut(s)	225, 293
BsiHKAI	GWGCWC	1 cut(s)	279
BsiHKCI	CYCGRG	2 cut(s)	168, 603
BslFI	GGGAC	3 cut(s)	185, 230, 1189
BslI	CCNNNNNNNGG	4 cut(s)	493, 542, 765, 1086
BsmAI	GTCTC	3 cut(s)	248, 310, 1337
BsmFI	GGGAC	3 cut(s)	185, 230, 1189
BsnI	GGCC	3 cut(s)	292, 535, 1655
Bso31I	GGTCTC	1 cut(s)	310
BsoBI	CYCGRG	2 cut(s)	168, 603
Bsp1286I	GDGCHC	1 cut(s)	279
Bsp13I	TCCGGA	2 cut(s)	96, 250
Bsp143I	GATC	5 cut(s)	99, 468, 1186, 1279, 1648
Bsp68I	TCGCGA	2 cut(s)	1575, 1888
BspANI	GGCC	3 cut(s)	292, 535, 1655
BspCNI	CTCAG	3 cut(s)	1014, 1264, 1510
BspDI	ATCGAT	2 cut(s)	1064, 1755
BspEI	TCCGGA	2 cut(s)	96, 250
BspFNI	CGCG	5 cut(s)	266, 494, 1238, 1575, 1888
BspLI	GGNNCC	4 cut(s)	101, 626, 1188, 1281
BspPI	GGATC	7 cut(s)	94, 107, 1181, 1194, 1274, 1287, 1643
BspQI	GCTCTTC	1 cut(s)	169
BspT107I	GGYRCC	1 cut(s)	624
BspTNI	GGTCTC	1 cut(s)	310
BsrDI	GCAATG	3 cut(s)	750, 875, 1795
BsrFI	RCCGGY	2 cut(s)	288, 292
BsrI	ACTGG	4 cut(s)	185, 960, 1190, 1295
BssAI	RCCGGY	2 cut(s)	288, 292
BssECI	CCNNGG	4 cut(s)	168, 729, 1181, 1283
BssMI	GATC	5 cut(s)	99, 468, 1186, 1279, 1648
BssNI	GRCGYC	1 cut(s)	243
BssSI	CACGAG	1 cut(s)	278
BssT1I	CCWWGG	2 cut(s)	1181, 1283
Bst2BI	CACGAG	1 cut(s)	278
Bst2UI	CCWGG	4 cut(s)	760, 929, 1045, 1462
Bst4CI	ACNGT	3 cut(s)	217, 343, 733
Bst6I	CTCTTC	4 cut(s)	19, 56, 169, 1058
BstACI	GRCGYC	1 cut(s)	243
BstAPI	GCANNNNNTGC	1 cut(s)	359
BstBAI	YACGTR	1 cut(s)	859
BstC8I	GCNNGC	8 cut(s)	290, 294, 325, 360, 369, 822, 909, 1075
BstDEI	CTNAG	6 cut(s)	465, 684, 1001, 1272, 1497, 1636
BstDSI	CCRYGG	1 cut(s)	729
BstEII	GGTNACC	2 cut(s)	1445, 1879
BstF5I	GGATG	3 cut(s)	1323, 1521, 1828
BstFNI	CGCG	5 cut(s)	266, 494, 1238, 1575, 1888
BstKTI	GATC	5 cut(s)	102, 471, 1189, 1282, 1651
BstMAI	GTCTC	3 cut(s)	248, 310, 1337
BstMBI	GATC	5 cut(s)	99, 468, 1186, 1279, 1648
BstMCI	CGRYCG	2 cut(s)	225, 293
BstMWI	GCNNNNNNNGC	8 cut(s)	329, 359, 364, 368, 557, 734, 1244, 1559
BstNI	CCWGG	4 cut(s)	760, 929, 1045, 1462
BstPI	GGTNACC	2 cut(s)	1445, 1879
BstSCI	CCNGG	6 cut(s)	167, 168, 758, 927, 1043, 1460
BstSFI	CTRYAG	1 cut(s)	1412
BstSNI	TACGTA	1 cut(s)	859
BstUI	CGCG	5 cut(s)	266, 494, 1238, 1575, 1888
BstV1I	GCAGC	6 cut(s)	146, 388, 737, 742, 1027, 1387
BstV2I	GAAGAC	1 cut(s)	596
BstX2I	RGATCY	5 cut(s)	99, 468, 1186, 1279, 1648
BstXI	CCANNNNNNTGG	1 cut(s)	657
BstYI	RGATCY	5 cut(s)	99, 468, 1186, 1279, 1648
BstZI	CGGCCG	1 cut(s)	290
Bsu15I	ATCGAT	2 cut(s)	1064, 1755
BsuRI	GGCC	3 cut(s)	292, 535, 1655
BsuTUI	ATCGAT	2 cut(s)	1064, 1755
BtgI	CCRYGG	1 cut(s)	729
BtgZI	GCGATG	1 cut(s)	311
BtsCI	GGATG	3 cut(s)	1323, 1521, 1828
BtsI	GCAGTG	1 cut(s)	668
BtsIMutI	CAGTG	2 cut(s)	668, 1302
BtuMI	TCGCGA	2 cut(s)	1575, 1888
Cac8I	GCNNGC	8 cut(s)	290, 294, 325, 360, 369, 822, 909, 1075
Cfr10I	RCCGGY	2 cut(s)	288, 292
Cfr13I	GGNCC	3 cut(s)	1476, 1654, 1687
Cfr9I	CCCGGG	1 cut(s)	168
ClaI	ATCGAT	2 cut(s)	1064, 1755
CseI	GACGC	2 cut(s)	359, 1724
Csp6I	GTAC	4 cut(s)	490, 856, 1556, 1596
CspCI	CAANNNNNGTGG	2 cut(s)	1280, 1315
CviAII	CATG	7 cut(s)	764, 1095, 1169, 1512, 1521, 1620, 1795
CviQI	GTAC	4 cut(s)	490, 856, 1556, 1596
DdeI	CTNAG	6 cut(s)	465, 684, 1001, 1272, 1497, 1636
DpnI	GATC	5 cut(s)	101, 470, 1188, 1281, 1650
DpnII	GATC	5 cut(s)	99, 468, 1186, 1279, 1648
DraI	TTTAAA	1 cut(s)	1158
EaeI	YGGCCR	2 cut(s)	290, 533
EagI	CGGCCG	1 cut(s)	290
Eam1104I	CTCTTC	4 cut(s)	19, 56, 169, 1058
EarI	CTCTTC	4 cut(s)	19, 56, 169, 1058
EciI	GGCGGA	2 cut(s)	46, 138
Ecl136II	GAGCTC	1 cut(s)	277
EclXI	CGGCCG	1 cut(s)	290
Eco105I	TACGTA	1 cut(s)	859
Eco130I	CCWWGG	2 cut(s)	1181, 1283
Eco24I	GRGCYC	1 cut(s)	279
Eco31I	GGTCTC	1 cut(s)	310
Eco47I	GGWCC	2 cut(s)	1476, 1687
Eco52I	CGGCCG	1 cut(s)	290
Eco53kI	GAGCTC	1 cut(s)	277
Eco57I	CTGAAG	2 cut(s)	1184, 1620
Eco88I	CYCGRG	2 cut(s)	168, 603
Eco91I	GGTNACC	2 cut(s)	1445, 1879
EcoICRI	GAGCTC	1 cut(s)	277
EcoO109I	RGGNCCY	1 cut(s)	1476
EcoO65I	GGTNACC	2 cut(s)	1445, 1879
EcoRII	CCWGG	4 cut(s)	758, 927, 1043, 1460
EcoT14I	CCWWGG	2 cut(s)	1181, 1283
EcoT22I	ATGCAT	1 cut(s)	1828
EcoT38I	GRGCYC	1 cut(s)	279
ErhI	CCWWGG	2 cut(s)	1181, 1283
FaeI	CATG	7 cut(s)	767, 1098, 1172, 1515, 1524, 1623, 1798
FalI	AAGNNNNNCTT	2 cut(s)	1661, 1693
FaqI	GGGAC	3 cut(s)	185, 230, 1189
FatI	CATG	7 cut(s)	763, 1094, 1168, 1511, 1520, 1619, 1794
FauI	CCCGC	2 cut(s)	164, 839
Fnu4HI	GCNGC	8 cut(s)	160, 333, 402, 726, 756, 1041, 1401, 1458
FokI	GGATG	3 cut(s)	1330, 1528, 1835
FriOI	GRGCYC	1 cut(s)	279
Fsp4HI	GCNGC	8 cut(s)	160, 333, 402, 726, 756, 1041, 1401, 1458
FspBI	CTAG	7 cut(s)	708, 779, 936, 1389, 1430, 1850, 1865
GluI	GCNGC	8 cut(s)	160, 333, 402, 726, 756, 1041, 1401, 1458
GsaI	CCCAGC	1 cut(s)	670
HaeIII	GGCC	3 cut(s)	292, 535, 1655
HgaI	GACGC	2 cut(s)	359, 1724
Hin1I	GRCGYC	1 cut(s)	243
Hin1II	CATG	7 cut(s)	767, 1098, 1172, 1515, 1524, 1623, 1798
HincII	GTYRAC	1 cut(s)	1138
HindII	GTYRAC	1 cut(s)	1138
HindIII	AAGCTT	1 cut(s)	1151
HinfI	GANTC	6 cut(s)	173, 260, 407, 646, 1240, 1632
HphI	GGTGA	3 cut(s)	82, 448, 1891
Hpy166II	GTNNAC	5 cut(s)	208, 439, 1138, 1302, 1903
Hpy188I	TCNGA	4 cut(s)	867, 1273, 1500, 1875
Hpy8I	GTNNAC	5 cut(s)	208, 439, 1138, 1302, 1903
Hpy99I	CGWCG	1 cut(s)	353
HpyAV	CCTTC	8 cut(s)	17, 103, 412, 562, 696, 1208, 1325, 1785
HpyCH4III	ACNGT	3 cut(s)	217, 343, 733
HpyCH4IV	ACGT	6 cut(s)	243, 271, 696, 858, 1101, 1663
HpyF10VI	GCNNNNNNNGC	8 cut(s)	329, 359, 364, 368, 557, 734, 1244, 1559
HpyF3I	CTNAG	6 cut(s)	465, 684, 1001, 1272, 1497, 1636
HpySE526I	ACGT	6 cut(s)	243, 271, 696, 858, 1101, 1663
Hsp92I	GRCGYC	1 cut(s)	243
Hsp92II	CATG	7 cut(s)	767, 1098, 1172, 1515, 1524, 1623, 1798
Kpn2I	TCCGGA	2 cut(s)	96, 250
KroI	GCCGGC	2 cut(s)	288, 292
KroNI	GCCGGC	2 cut(s)	290, 294
Kzo9I	GATC	5 cut(s)	99, 468, 1186, 1279, 1648
LguI	GCTCTTC	1 cut(s)	169
LmnI	GCTCC	2 cut(s)	502, 1736
Lsp1109I	GCAGC	6 cut(s)	146, 388, 737, 742, 1027, 1387
MaeI	CTAG	7 cut(s)	708, 779, 936, 1389, 1430, 1850, 1865
MaeII	ACGT	6 cut(s)	243, 271, 696, 858, 1101, 1663
MaeIII	GTNAC	5 cut(s)	1004, 1445, 1507, 1748, 1879
MalI	GATC	5 cut(s)	101, 470, 1188, 1281, 1650
MboI	GATC	5 cut(s)	99, 468, 1186, 1279, 1648
MflI	RGATCY	5 cut(s)	99, 468, 1186, 1279, 1648
MhlI	GDGCHC	1 cut(s)	279
MluCI	AATT	8 cut(s)	86, 713, 836, 1010, 1119, 1355, 1492, 1569
MlyI	GAGTC	3 cut(s)	167, 269, 416
MmeI	TCCRAC	5 cut(s)	54, 1257, 1612, 1665, 1714
Mph1103I	ATGCAT	1 cut(s)	1828
MroI	TCCGGA	2 cut(s)	96, 250
MroNI	GCCGGC	2 cut(s)	288, 292
MroXI	GAANNNNTTC	1 cut(s)	1569
MseI	TTAA	5 cut(s)	1122, 1157, 1380, 1485, 1833
MslI	CAYNNNNRTG	1 cut(s)	1514
MspA1I	CMGCKG	1 cut(s)	159
MspR9I	CCNGG	6 cut(s)	169, 170, 760, 929, 1045, 1462
MvaI	CCWGG	4 cut(s)	760, 929, 1045, 1462
MvnI	CGCG	5 cut(s)	266, 494, 1238, 1575, 1888
MwoI	GCNNNNNNNGC	8 cut(s)	329, 359, 364, 368, 557, 734, 1244, 1559
NaeI	GCCGGC	2 cut(s)	290, 294
NciI	CCSGG	2 cut(s)	169, 170
NdeII	GATC	5 cut(s)	99, 468, 1186, 1279, 1648
NgoMIV	GCCGGC	2 cut(s)	288, 292
NlaIII	CATG	7 cut(s)	767, 1098, 1172, 1515, 1524, 1623, 1798
NlaIV	GGNNCC	4 cut(s)	101, 626, 1188, 1281
NmeAIII	GCCGAG	2 cut(s)	388, 1228
NmuCI	GTSAC	2 cut(s)	1507, 1879
NruI	TCGCGA	2 cut(s)	1575, 1888
NsiI	ATGCAT	1 cut(s)	1828
PaeR7I	CTCGAG	1 cut(s)	603
PciSI	GCTCTTC	1 cut(s)	169
PdiI	GCCGGC	2 cut(s)	290, 294
PdmI	GAANNNNTTC	1 cut(s)	1569
PfeI	GAWTC	3 cut(s)	646, 1240, 1632
PflFI	GACNNNGTC	1 cut(s)	259
PkrI	GCNGC	8 cut(s)	161, 334, 403, 727, 757, 1042, 1402, 1459
PleI	GAGTC	3 cut(s)	167, 268, 415
PpsI	GAGTC	3 cut(s)	167, 268, 415
Ppu21I	YACGTR	1 cut(s)	859
PpuMI	RGGWCCY	1 cut(s)	1476
PshBI	ATTAAT	1 cut(s)	1122
Psp124BI	GAGCTC	1 cut(s)	279
Psp5II	RGGWCCY	1 cut(s)	1476
Psp6I	CCWGG	4 cut(s)	758, 927, 1043, 1460
PspEI	GGTNACC	2 cut(s)	1445, 1879
PspFI	CCCAGC	1 cut(s)	666
PspGI	CCWGG	4 cut(s)	758, 927, 1043, 1460
PspN4I	GGNNCC	4 cut(s)	101, 626, 1188, 1281
PspPI	GGNCC	3 cut(s)	1476, 1654, 1687
PspPPI	RGGWCCY	1 cut(s)	1476
PspXI	VCTCGAGB	1 cut(s)	603
PsrI	GAACNNNNNNTAC	2 cut(s)	473, 505
PsuI	RGATCY	5 cut(s)	99, 468, 1186, 1279, 1648
PsyI	GACNNNGTC	1 cut(s)	259
RruI	TCGCGA	2 cut(s)	1575, 1888
RsaI	GTAC	4 cut(s)	491, 857, 1557, 1597
RsaNI	GTAC	4 cut(s)	490, 856, 1556, 1596
RseI	CAYNNNNRTG	1 cut(s)	1514
SacI	GAGCTC	1 cut(s)	279
SapI	GCTCTTC	1 cut(s)	169
SaqAI	TTAA	5 cut(s)	1122, 1157, 1380, 1485, 1833
SatI	GCNGC	8 cut(s)	160, 333, 402, 726, 756, 1041, 1401, 1458
Sau3AI	GATC	5 cut(s)	99, 468, 1186, 1279, 1648
Sau96I	GGNCC	3 cut(s)	1476, 1654, 1687
SchI	GAGTC	3 cut(s)	167, 269, 416
ScrFI	CCNGG	6 cut(s)	169, 170, 760, 929, 1045, 1462
SduI	GDGCHC	1 cut(s)	279
SfcI	CTRYAG	1 cut(s)	1412
Sfr274I	CTCGAG	1 cut(s)	603
SinI	GGWCC	2 cut(s)	1476, 1687
SlaI	CTCGAG	1 cut(s)	603
SmaI	CCCGGG	1 cut(s)	170
SmiMI	CAYNNNNRTG	1 cut(s)	1514
SmlI	CTYRAG	4 cut(s)	512, 603, 636, 1678
SmoI	CTYRAG	4 cut(s)	512, 603, 636, 1678
SnaBI	TACGTA	1 cut(s)	859
SpeI	ACTAGT	1 cut(s)	1388
Sse9I	AATT	8 cut(s)	86, 713, 836, 1010, 1119, 1355, 1492, 1569
SspMI	CTAG	7 cut(s)	708, 779, 936, 1389, 1430, 1850, 1865
SstI	GAGCTC	1 cut(s)	279
StyD4I	CCNGG	6 cut(s)	167, 168, 758, 927, 1043, 1460
StyI	CCWWGG	2 cut(s)	1181, 1283
TaaI	ACNGT	3 cut(s)	217, 343, 733
TaiI	ACGT	6 cut(s)	246, 274, 699, 861, 1104, 1666
TaqI	TCGA	9 cut(s)	192, 221, 348, 390, 587, 604, 1056, 1064, 1755
TaqII	GACCGA	1 cut(s)	239
TasI	AATT	8 cut(s)	86, 713, 836, 1010, 1119, 1355, 1492, 1569
TauI	GCSGC	2 cut(s)	335, 1460
TfiI	GAWTC	3 cut(s)	646, 1240, 1632
Tru1I	TTAA	5 cut(s)	1122, 1157, 1380, 1485, 1833
Tru9I	TTAA	5 cut(s)	1122, 1157, 1380, 1485, 1833
TscAI	CASTG	2 cut(s)	668, 1302
TseFI	GTSAC	2 cut(s)	1507, 1879
TseI	GCWGC	6 cut(s)	159, 401, 725, 755, 1040, 1400
Tsp45I	GTSAC	2 cut(s)	1507, 1879
TspDTI	ATGAA	3 cut(s)	1608, 1758, 1773
TspMI	CCCGGG	1 cut(s)	168
TspRI	CASTG	2 cut(s)	668, 1302
Tth111I	GACNNNGTC	1 cut(s)	259
VpaK11BI	GGWCC	2 cut(s)	1476, 1687
VspI	ATTAAT	1 cut(s)	1122
XapI	RAATTY	4 cut(s)	86, 836, 1492, 1569
XbaI	TCTAGA	3 cut(s)	778, 1429, 1849
XhoI	CTCGAG	1 cut(s)	603
XmaI	CCCGGG	1 cut(s)	168
XmnI	GAANNNNTTC	1 cut(s)	1569
XspI	CTAG	7 cut(s)	708, 779, 936, 1389, 1430, 1850, 1865
ZraI	GACGTC	1 cut(s)	244
Zsp2I	ATGCAT	1 cut(s)	1828

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.