Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0004751

Physical Location & Seq

Genomic Coordinates Forward (+)

35016187 .. 35018267

Gene Structure 2081 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0201700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1536 bp

ATGGCAGGGGGTTTTGGAGCGGCAACGGGGGGCAAAGAATTCGAAGCGAAGATCACTACACTTGCGATCATTTCTTGCATAATGGCCGCTACTGGGGGCCTTATGTTTGGCTACGATGTTGGTATTTCAGGGGGTGTTACATCGATGCCCGAATTTCTGAAGGAGTTCTTTCCAGTAGTCTATAAAAATCAACAAATTCCAGGACTTGCAGGAAATTACTGCAAATACGATAATCAAGGGCTGCAATTGTTCACATCTTCATTGTATCTTGCTGCTTTAATAGCAACCTTCTTTGCGTCATACACAACTAAAACACTAGGTCGAAAGATTACCATGTTGATTGCTGGGAATTTATTTTTAGTTGGAACAGCTTTTAATGCTGCAGCTGTTAACCTTCCAATGCTTATTGTTGGGAGGCTTTTACTTGGTTGCGGAGTTGGTTTTGCTAACCAGGCAATTCCACTATTTCTTTCTGAGATTGCACCCACAAGAATTCGTGGGGCACTCAATATACTCTTCCAGCTCAATATCACCATTGGCATTCTTGTTGCAAACTTGATCAATTATGGTACAGCGAAACTTGCGCACGGATACGGATGGAGAATATCGTTGGGTTTGGCTGGGATTCCGGCACTTCTGTTAACCGTGGGGTCTCTTGTTGTGGTAGACACTCCTAACAGTTTGATCGCACGAGGTAAATTGGAGGAAGGAAAAGCAATTCTTAGAAGGATTCGTGGTGCTGATAATGTTGATCCAGAATACTCAGAAATTGTTGAGGCAAGTCGTGCGGCCGCAGAAGTGAAAAATCCTTTCCAAAACCTCCTTAAGCGAAGGAATAGGCCTACTCTGGTCATTGCAATTATGATGCAGATCTTCCAACAATTCACAGGCATCAACGCTATCATGTTTTATGCTCCAGTTTTGTTCCAGACCTTGGGATTTAAGAGTGATGCTTCCCTATACTCAGCTGTTATAACTGGACTAGTCAATGTCCTCTCAACTCTTGTATCAGTCGTCTTTGTGGATAAAGCTGGTCGCCGAATGCTTTTGATCGAAGCTGGGGTTCAAATGTTCCTTTCTCAAATGGGAGTTGCAATAGTGATGGGACTCAAAGTTAAGGATCATTCTAACAACCTCGGACATGGCTTGGGAGTTCTTGTGTTGGTTTTCGTATGCAGCTTTGTGGCATCATTTGCATGGTCGTGGGGACCCCTTGGGTGGTTGATCCCTAGTGAGACATTCGCCGTTGAAGCTCGCTCTGCTGGCCAAAGTGTGACTGTTAGTACTAACATGCTCTTCACATTTGTCATAGCACAGGCCTTCCTCTCAATGCTGTGTCACATGAAGTTTGGGATATTTATTTTCTTCTCGGGTTGGGTCTTGGTCATGACACTCTTTACGATCTTCTTTATTCCTGAGACCAAGAATATCCCCATTGATGAGATGAATGATCAAGTGTGGAAGAAACACTGGTATTGGAAAAGATACATGAATGACTTCCAAGATGGACCAAATGGAAAATATCCTCAAGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006139 GO:0006396 GO:0006397 GO:0006417 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009639 GO:0009657 GO:0009889 GO:0009892 GO:0009941 GO:0009987 GO:0010114 GO:0010467 GO:0010468 GO:0010556 GO:0010605 GO:0010608 GO:0016020 GO:0016043 GO:0016070 GO:0016071 GO:0019219 GO:0019222 GO:0031090 GO:0031323 GO:0031324 GO:0031326 GO:0031967 GO:0031969 GO:0031975 GO:0032069 GO:0032074 GO:0032268 GO:0034248 GO:0034641 GO:0042170 GO:0043086 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043621 GO:0044092 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051246 GO:0051252 GO:0051253 GO:0051336 GO:0051346 GO:0060255 GO:0060700 GO:0060701 GO:0065007 GO:0065009 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0098588 GO:0098805 GO:1901360 GO:1901363 GO:1901917 GO:1901918 GO:1905777 GO:1905778 GO:2000112

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_16 TPR_8

Protein Analysis

511

Amino Acids

55.7

Weight (kDa)

9.35

Isoelectric Point (pI)

27.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sugar_tr	PF00083	26 - 483	2e-121	Sugar (and other) transporter
MFS_1	PF07690	77 - 434	2.1e-23	Major Facilitator Superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004751)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G17040 AT3G17040 AT3G17040 AT3G17040
fragaria_vesca	FvH4_4g19660 FvH4_4g19660 FvH4_4g19660 FvH4_4g19660 FvH4_4g19660 FvH4_4g19660
malus_domestica	MD13G1154800.v1.1
prunus_persica	Prupe.1G117800_v2.0.a1 Prupe.1G117800_v2.0.a1
pyrus_communis	pycom13g13160
rosa_chinensis	RchiOBHm_Chr4g0425111
rosa_laevigata	RLG00000007402
rosa_multiflora	Rmu_ssc0000420.1_g000027
rosa_roxburghii	Rroxscaffold_1G00031740 Rroxscaffold_5G00367180
rosa_rugosa	Rorug01G0106900 Rorug04G0201600 Rorug04G0201700
rosa_samantha	Rh1AG082100 Rh1BG099300 Rh4AG258300 Rh4BG263900 Rh4CG275000 Rh4DG259800
rosa_wichuraiana	Rw0G003480 Rw1G016170 Rw4G022330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	974
Acc16I	TGCGCA	1 cut(s)	585
AccB7I	CCANNNNNTGG	1 cut(s)	934
AccBSI	CCGCTC	1 cut(s)	20
AccI	GTMKAC	1 cut(s)	666
AciI	CCGC	5 cut(s)	20, 87, 432, 788, 792
AclWI	GGATC	3 cut(s)	746, 1128, 1219
AcoI	YGGCCR	3 cut(s)	84, 789, 1264
AcsI	RAATTY	5 cut(s)	38, 152, 195, 349, 492
AcuI	CTGAAG	1 cut(s)	179
AfaI	GTAC	2 cut(s)	571, 1285
AfiI	CCNNNNNNNGG	3 cut(s)	93, 934, 1218
AflII	CTTAAG	1 cut(s)	824
AgsI	TTSAA	2 cut(s)	1067, 1250
AhlI	ACTAGT	1 cut(s)	982
AjnI	CCWGG	2 cut(s)	199, 450
AluBI	AGCT	8 cut(s)	371, 386, 523, 968, 1031, 1058, 1179, 1253
AluI	AGCT	8 cut(s)	371, 386, 523, 968, 1031, 1058, 1179, 1253
Alw26I	GTCTC	3 cut(s)	657, 1229, 1412
AlwI	GGATC	3 cut(s)	746, 1128, 1219
Ama87I	CYCGRG	1 cut(s)	1369
AoxI	GGCC	6 cut(s)	84, 97, 789, 839, 1264, 1317
ApeKI	GCWGC	5 cut(s)	241, 272, 380, 383, 1176
ApoI	RAATTY	5 cut(s)	38, 152, 195, 349, 492
Asp700I	GAANNNNTTC	2 cut(s)	164, 1496
AspLEI	GCGC	1 cut(s)	586
AspS9I	GGNCC	3 cut(s)	97, 1208, 1508
AsuHPI	GGTGA	1 cut(s)	523
AsuII	TTCGAA	1 cut(s)	42
AvaI	CYCGRG	1 cut(s)	1369
AvaII	GGWCC	2 cut(s)	1208, 1508
BaeGI	GKGCMC	1 cut(s)	505
BaeI	ACNNNNGTAYC	2 cut(s)	990, 1023
BalI	TGGCCA	1 cut(s)	1266
BauI	CACGAG	1 cut(s)	690
BbvI	GCAGC	5 cut(s)	228, 259, 367, 395, 1188
BccI	CCATC	3 cut(s)	591, 1096, 1499
BceAI	ACGGC	1 cut(s)	1229
BcgI	CGANNNNNNTGC	2 cut(s)	22, 56
BciT130I	CCWGG	2 cut(s)	201, 452
BciVI	GTATCC	1 cut(s)	584
BclI	TGATCA	2 cut(s)	558, 1450
BcoDI	GTCTC	3 cut(s)	657, 1229, 1412
BcuI	ACTAGT	1 cut(s)	982
BfaI	CTAG	3 cut(s)	317, 983, 1230
BfmI	CTRYAG	1 cut(s)	381
BfrI	CTTAAG	1 cut(s)	824
BfuI	GTATCC	1 cut(s)	584
BglII	AGATCT	1 cut(s)	870
BisI	GCNGC	9 cut(s)	21, 87, 242, 273, 381, 384, 789, 792, 1177
BlsI	GCNGC	9 cut(s)	22, 88, 243, 274, 382, 385, 790, 793, 1178
BmcAI	AGTACT	1 cut(s)	1285
Bme1390I	CCNGG	2 cut(s)	201, 452
Bme18I	GGWCC	2 cut(s)	1208, 1508
BmeT110I	CYCGRG	1 cut(s)	1369
BmgT120I	GGNCC	3 cut(s)	97, 1208, 1508
BmiI	GGNNCC	3 cut(s)	98, 1209, 1210
BmrFI	CCNGG	2 cut(s)	201, 452
BmrI	ACTGGG	1 cut(s)	102
BmsI	GCATC	5 cut(s)	135, 855, 900, 940, 1196
BmuI	ACTGGG	1 cut(s)	102
BpmI	CTGGAG	1 cut(s)	900
Bpu14I	TTCGAA	1 cut(s)	42
BpuEI	CTTGAG	1 cut(s)	1512
Bsa29I	ATCGAT	1 cut(s)	143
BsaBI	GATNNNNATC	1 cut(s)	869
BsaI	GGTCTC	2 cut(s)	657, 1412
BsaJI	CCNNGG	4 cut(s)	645, 933, 1135, 1213
BsaXI	ACNNNNNCTCC	2 cut(s)	1143, 1173
Bsc4I	CCNNNNNNNGG	3 cut(s)	93, 934, 1218
Bse1I	ACTGG	5 cut(s)	97, 173, 917, 982, 1475
Bse3DI	GCAATG	1 cut(s)	852
Bse8I	GATNNNNATC	1 cut(s)	869
BseBI	CCWGG	2 cut(s)	201, 452
BseCI	ATCGAT	1 cut(s)	143
BseDI	CCNNGG	4 cut(s)	645, 933, 1135, 1213
BseGI	GGATG	1 cut(s)	602
BseJI	GATNNNNATC	1 cut(s)	869
BseLI	CCNNNNNNNGG	3 cut(s)	93, 934, 1218
BseMI	GCAATG	1 cut(s)	852
BseMII	CTCAG	4 cut(s)	465, 777, 978, 1407
BseNI	ACTGG	5 cut(s)	97, 173, 917, 982, 1475
BseSI	GKGCMC	1 cut(s)	505
BseX3I	CGGCCG	1 cut(s)	789
BseXI	GCAGC	5 cut(s)	228, 259, 367, 395, 1188
BseYI	CCCAGC	3 cut(s)	344, 620, 1058
Bsh1285I	CGRYCG	1 cut(s)	792
BshFI	GGCC	6 cut(s)	86, 99, 791, 841, 1266, 1319
BshVI	ATCGAT	1 cut(s)	143
BsiEI	CGRYCG	1 cut(s)	792
BsiHKCI	CYCGRG	1 cut(s)	1369
BsiSI	CCGG	1 cut(s)	629
BslFI	GGGAC	2 cut(s)	1119, 1221
BslI	CCNNNNNNNGG	3 cut(s)	93, 934, 1218
BsmAI	GTCTC	3 cut(s)	657, 1229, 1412
BsmFI	GGGAC	2 cut(s)	1119, 1221
BsmI	GAATGC	2 cut(s)	540, 1047
BsnI	GGCC	6 cut(s)	86, 99, 791, 841, 1266, 1319
Bso31I	GGTCTC	2 cut(s)	657, 1412
BsoBI	CYCGRG	1 cut(s)	1369
Bsp119I	TTCGAA	1 cut(s)	42
Bsp1286I	GDGCHC	1 cut(s)	505
BspACI	CCGC	5 cut(s)	20, 87, 432, 788, 792
BspANI	GGCC	6 cut(s)	86, 99, 791, 841, 1266, 1319
BspCNI	CTCAG	4 cut(s)	466, 776, 977, 1408
BspDI	ATCGAT	1 cut(s)	143
BspHI	TCATGA	1 cut(s)	1386
BspLI	GGNNCC	3 cut(s)	98, 1209, 1210
BspMAI	CTGCAG	1 cut(s)	385
BspPI	GGATC	3 cut(s)	746, 1128, 1219
BspQI	GCTCTTC	1 cut(s)	1301
BspT104I	TTCGAA	1 cut(s)	42
BspTI	CTTAAG	1 cut(s)	824
BspTNI	GGTCTC	2 cut(s)	657, 1412
BsrBI	CCGCTC	1 cut(s)	20
BsrDI	GCAATG	1 cut(s)	852
BsrI	ACTGG	5 cut(s)	97, 173, 917, 982, 1475
BssECI	CCNNGG	4 cut(s)	645, 933, 1135, 1213
BssSI	CACGAG	1 cut(s)	690
BssT1I	CCWWGG	2 cut(s)	933, 1213
Bst2BI	CACGAG	1 cut(s)	690
Bst2UI	CCWGG	2 cut(s)	201, 452
Bst4CI	ACNGT	3 cut(s)	646, 680, 1279
Bst6I	CTCTTC	2 cut(s)	521, 1301
BstAFI	CTTAAG	1 cut(s)	824
BstAPI	GCANNNNNTGC	2 cut(s)	785, 1193
BstBI	TTCGAA	1 cut(s)	42
BstC8I	GCNNGC	2 cut(s)	1255, 1264
BstDEI	CTNAG	5 cut(s)	474, 722, 763, 964, 1416
BstDSI	CCRYGG	1 cut(s)	645
BstF5I	GGATG	1 cut(s)	602
BstHHI	GCGC	1 cut(s)	586
BstMAI	GTCTC	3 cut(s)	657, 1229, 1412
BstMCI	CGRYCG	1 cut(s)	792
BstMWI	GCNNNNNNNGC	9 cut(s)	281, 377, 452, 581, 785, 1193, 1250, 1259, 1263
BstNI	CCWGG	2 cut(s)	201, 452
BstNSI	RCATGY	1 cut(s)	1294
BstSCI	CCNGG	2 cut(s)	199, 450
BstSFI	CTRYAG	1 cut(s)	381
BstSLI	GKGCMC	1 cut(s)	505
BstV1I	GCAGC	5 cut(s)	228, 259, 367, 395, 1188
BstX2I	RGATCY	1 cut(s)	870
BstYI	RGATCY	1 cut(s)	870
BstZI	CGGCCG	1 cut(s)	789
Bsu15I	ATCGAT	1 cut(s)	143
BsuI	GTATCC	1 cut(s)	584
BsuRI	GGCC	6 cut(s)	86, 99, 791, 841, 1266, 1319
BsuTUI	ATCGAT	1 cut(s)	143
BtgI	CCRYGG	1 cut(s)	645
BtsCI	GGATG	1 cut(s)	602
BtsIMutI	CAGTG	1 cut(s)	1468
Cac8I	GCNNGC	2 cut(s)	1255, 1264
CciI	TCATGA	1 cut(s)	1386
CciNI	GCGGCCGC	1 cut(s)	789
CfoI	GCGC	1 cut(s)	586
Cfr13I	GGNCC	3 cut(s)	97, 1208, 1508
ClaI	ATCGAT	1 cut(s)	143
CseI	GACGC	1 cut(s)	285
Csp6I	GTAC	2 cut(s)	570, 1284
CviAII	CATG	8 cut(s)	334, 904, 1142, 1197, 1291, 1342, 1387, 1489
CviQI	GTAC	2 cut(s)	570, 1284
DdeI	CTNAG	5 cut(s)	474, 722, 763, 964, 1416
EaeI	YGGCCR	3 cut(s)	84, 789, 1264
EagI	CGGCCG	1 cut(s)	789
Eam1104I	CTCTTC	2 cut(s)	521, 1301
EarI	CTCTTC	2 cut(s)	521, 1301
EclXI	CGGCCG	1 cut(s)	789
Eco130I	CCWWGG	2 cut(s)	933, 1213
Eco147I	AGGCCT	2 cut(s)	841, 1319
Eco31I	GGTCTC	2 cut(s)	657, 1412
Eco47I	GGWCC	2 cut(s)	1208, 1508
Eco52I	CGGCCG	1 cut(s)	789
Eco57I	CTGAAG	1 cut(s)	179
Eco88I	CYCGRG	1 cut(s)	1369
EcoO109I	RGGNCCY	2 cut(s)	97, 1208
EcoRI	GAATTC	2 cut(s)	38, 492
EcoRII	CCWGG	2 cut(s)	199, 450
EcoT14I	CCWWGG	2 cut(s)	933, 1213
ErhI	CCWWGG	2 cut(s)	933, 1213
FaeI	CATG	8 cut(s)	337, 907, 1145, 1200, 1294, 1345, 1390, 1492
FalI	AAGNNNNNCTT	4 cut(s)	152, 184, 705, 737
FaqI	GGGAC	2 cut(s)	1119, 1221
FatI	CATG	8 cut(s)	333, 903, 1141, 1196, 1290, 1341, 1386, 1488
FbaI	TGATCA	2 cut(s)	558, 1450
FblI	GTMKAC	1 cut(s)	666
Fnu4HI	GCNGC	9 cut(s)	21, 87, 242, 273, 381, 384, 789, 792, 1177
FokI	GGATG	1 cut(s)	609
Fsp4HI	GCNGC	9 cut(s)	21, 87, 242, 273, 381, 384, 789, 792, 1177
FspBI	CTAG	3 cut(s)	317, 983, 1230
FspI	TGCGCA	1 cut(s)	585
GlaI	GCGC	1 cut(s)	585
GluI	GCNGC	9 cut(s)	21, 87, 242, 273, 381, 384, 789, 792, 1177
GsaI	CCCAGC	3 cut(s)	348, 624, 1062
GsuI	CTGGAG	1 cut(s)	900
HaeIII	GGCC	6 cut(s)	86, 99, 791, 841, 1266, 1319
HapII	CCGG	1 cut(s)	629
HgaI	GACGC	1 cut(s)	285
HhaI	GCGC	1 cut(s)	586
Hin1II	CATG	8 cut(s)	337, 907, 1145, 1200, 1294, 1345, 1390, 1492
Hin6I	GCGC	1 cut(s)	584
HinP1I	GCGC	1 cut(s)	584
HincII	GTYRAC	2 cut(s)	391, 642
HindII	GTYRAC	2 cut(s)	391, 642
HinfI	GANTC	3 cut(s)	625, 730, 1107
HpaI	GTTAAC	2 cut(s)	391, 642
HpaII	CCGG	1 cut(s)	629
HphI	GGTGA	1 cut(s)	523
Hpy166II	GTNNAC	4 cut(s)	252, 391, 642, 667
Hpy188I	TCNGA	4 cut(s)	159, 475, 766, 1139
Hpy188III	TCNNGA	4 cut(s)	755, 928, 1387, 1415
Hpy8I	GTNNAC	4 cut(s)	252, 391, 642, 667
HpyAV	CCTTC	7 cut(s)	154, 298, 404, 701, 720, 825, 1330
HpyCH4III	ACNGT	3 cut(s)	646, 680, 1279
HpyF10VI	GCNNNNNNNGC	9 cut(s)	281, 377, 452, 581, 785, 1193, 1250, 1259, 1263
HpyF3I	CTNAG	5 cut(s)	474, 722, 763, 964, 1416
Hsp92II	CATG	8 cut(s)	337, 907, 1145, 1200, 1294, 1345, 1390, 1492
HspAI	GCGC	1 cut(s)	584
KflI	GGGWCCC	1 cut(s)	1208
Ksp22I	TGATCA	2 cut(s)	558, 1450
KspAI	GTTAAC	2 cut(s)	391, 642
LguI	GCTCTTC	1 cut(s)	1301
LmnI	GCTCC	2 cut(s)	17, 919
Lsp1109I	GCAGC	5 cut(s)	228, 259, 367, 395, 1188
LweI	GCATC	5 cut(s)	135, 855, 900, 940, 1196
MaeI	CTAG	3 cut(s)	317, 983, 1230
MaeIII	GTNAC	3 cut(s)	136, 1273, 1337
MbiI	CCGCTC	1 cut(s)	20
MboII	GAAGA	8 cut(s)	61, 249, 508, 865, 1288, 1357, 1396, 1474
MfeI	CAATTG	1 cut(s)	245
MflI	RGATCY	1 cut(s)	870
MhlI	GDGCHC	1 cut(s)	505
MlsI	TGGCCA	1 cut(s)	1266
MluNI	TGGCCA	1 cut(s)	1266
MlyI	GAGTC	1 cut(s)	1101
MmeI	TCCRAC	2 cut(s)	343, 901
MnlI	CCTC	9 cut(s)	408, 686, 697, 769, 830, 1004, 1145, 1334, 1536
Mox20I	TGGCCA	1 cut(s)	1266
MroXI	GAANNNNTTC	2 cut(s)	164, 1496
MscI	TGGCCA	1 cut(s)	1266
MseI	TTAA	8 cut(s)	278, 375, 390, 641, 825, 942, 1116, 1534
MslI	CAYNNNNRTG	2 cut(s)	1195, 1201
Msp20I	TGGCCA	1 cut(s)	1266
MspA1I	CMGCKG	2 cut(s)	386, 968
MspCI	CTTAAG	1 cut(s)	824
MspI	CCGG	1 cut(s)	629
MspR9I	CCNGG	2 cut(s)	201, 452
MunI	CAATTG	1 cut(s)	245
Mva1269I	GAATGC	2 cut(s)	540, 1047
MvaI	CCWGG	2 cut(s)	201, 452
MwoI	GCNNNNNNNGC	9 cut(s)	281, 377, 452, 581, 785, 1193, 1250, 1259, 1263
NlaIII	CATG	8 cut(s)	337, 907, 1145, 1200, 1294, 1345, 1390, 1492
NlaIV	GGNNCC	3 cut(s)	98, 1209, 1210
NmuCI	GTSAC	2 cut(s)	1273, 1337
NotI	GCGGCCGC	1 cut(s)	789
NsbI	TGCGCA	1 cut(s)	585
NspI	RCATGY	1 cut(s)	1294
NspV	TTCGAA	1 cut(s)	42
PagI	TCATGA	1 cut(s)	1386
PceI	AGGCCT	2 cut(s)	841, 1319
PciSI	GCTCTTC	1 cut(s)	1301
PctI	GAATGC	2 cut(s)	540, 1047
PdmI	GAANNNNTTC	2 cut(s)	164, 1496
PfeI	GAWTC	2 cut(s)	625, 730
PflMI	CCANNNNNTGG	1 cut(s)	934
PfoI	TCCNGGA	1 cut(s)	199
PkrI	GCNGC	9 cut(s)	22, 88, 243, 274, 382, 385, 790, 793, 1178
PleI	GAGTC	1 cut(s)	1101
PpsI	GAGTC	1 cut(s)	1101
PpuMI	RGGWCCY	1 cut(s)	1208
PsiI	TTATAA	1 cut(s)	974
Psp5II	RGGWCCY	1 cut(s)	1208
Psp6I	CCWGG	2 cut(s)	199, 450
PspFI	CCCAGC	3 cut(s)	344, 620, 1058
PspGI	CCWGG	2 cut(s)	199, 450
PspN4I	GGNNCC	3 cut(s)	98, 1209, 1210
PspPI	GGNCC	3 cut(s)	97, 1208, 1508
PspPPI	RGGWCCY	1 cut(s)	1208
PstI	CTGCAG	1 cut(s)	385
PsuI	RGATCY	1 cut(s)	870
PvuII	CAGCTG	2 cut(s)	386, 968
RsaI	GTAC	2 cut(s)	571, 1285
RsaNI	GTAC	2 cut(s)	570, 1284
RseI	CAYNNNNRTG	2 cut(s)	1195, 1201
SapI	GCTCTTC	1 cut(s)	1301
SaqAI	TTAA	8 cut(s)	278, 375, 390, 641, 825, 942, 1116, 1534
SatI	GCNGC	9 cut(s)	21, 87, 242, 273, 381, 384, 789, 792, 1177
Sau96I	GGNCC	3 cut(s)	97, 1208, 1508
ScaI	AGTACT	1 cut(s)	1285
SchI	GAGTC	1 cut(s)	1101
ScrFI	CCNGG	2 cut(s)	201, 452
SduI	GDGCHC	1 cut(s)	505
SfaNI	GCATC	5 cut(s)	135, 855, 900, 940, 1196
SfcI	CTRYAG	1 cut(s)	381
SfuI	TTCGAA	1 cut(s)	42
SinI	GGWCC	2 cut(s)	1208, 1508
SmiMI	CAYNNNNRTG	2 cut(s)	1195, 1201
SmlI	CTYRAG	2 cut(s)	824, 1527
SmoI	CTYRAG	2 cut(s)	824, 1527
SpeI	ACTAGT	1 cut(s)	982
SseBI	AGGCCT	2 cut(s)	841, 1319
SsiI	CCGC	5 cut(s)	20, 87, 432, 788, 792
SspMI	CTAG	3 cut(s)	317, 983, 1230
StuI	AGGCCT	2 cut(s)	841, 1319
StyD4I	CCNGG	2 cut(s)	199, 450
StyI	CCWWGG	2 cut(s)	933, 1213
TaaI	ACNGT	3 cut(s)	646, 680, 1279
TaqI	TCGA	4 cut(s)	42, 143, 322, 1053
TatI	WGTACW	1 cut(s)	1283
TauI	GCSGC	4 cut(s)	23, 89, 791, 794
TfiI	GAWTC	2 cut(s)	625, 730
Tru1I	TTAA	8 cut(s)	278, 375, 390, 641, 825, 942, 1116, 1534
Tru9I	TTAA	8 cut(s)	278, 375, 390, 641, 825, 942, 1116, 1534
TscAI	CASTG	1 cut(s)	1475
TseFI	GTSAC	2 cut(s)	1273, 1337
TseI	GCWGC	5 cut(s)	241, 272, 380, 383, 1176
Tsp45I	GTSAC	2 cut(s)	1273, 1337
TspDTI	ATGAA	4 cut(s)	249, 1358, 1460, 1505
TspGWI	ACGGA	2 cut(s)	603, 609
TspRI	CASTG	1 cut(s)	1475
Van91I	CCANNNNNTGG	1 cut(s)	934
Vha464I	CTTAAG	1 cut(s)	824
VpaK11BI	GGWCC	2 cut(s)	1208, 1508
XapI	RAATTY	5 cut(s)	38, 152, 195, 349, 492
XceI	RCATGY	1 cut(s)	1294
XmiI	GTMKAC	1 cut(s)	666
XmnI	GAANNNNTTC	2 cut(s)	164, 1496
XspI	CTAG	3 cut(s)	317, 983, 1230
ZrmI	AGTACT	1 cut(s)	1285

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.