Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0004751

Physical Location & Seq

Genomic Coordinates Forward (+)

50814482 .. 50818078

Gene Structure 3597 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ39434

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1833 bp

ATGCAGCAACTTCTCTCTTGTTCTTCTTCTTCTTCAAACCCCAACTTCACTCTCTTCTCCACCTCCCCAAACCCTAGCCACCTCTCCAAATTCACCTTCAAAATCCCCAATCTACCCCTCCACTCCCCTCCACGCTGCTCCACCCAACTCCTCGACCACGACTCCTCCGACGCCGCCGTTTCCGACGAACGTAGTCGACCCAATGCCGCCGTGCCGGAAACAAAACTAGCACTTGTCGTCCGCCGGCCCGCCATGGAGCTCCCCTCCGACGAGTCGGCTTCCCCCATCGACGTCGGGCTCGCCAAGTTCGCCAAGAAGATTGCGATATTCGAGCCCCAAGACGGCGCCGCCGGGTTGGATCCGAAAGAGAAGCCATTGAAGGTGAACTTGGACTTGGCATTGTACAGAGCTAAGATCTTGACCAGAAATTACCGCTATGCTGAAGCACAGCAAATACTTGAAAAGTGTATATATTATTGGCCGGAAGATGGGAGAGCTTACGTGGCATTGGGGAAGGCCTTAAGCAAACAATCGAAGACGGCCGAAGCCCGGGCTGTGTATGAGAAAGGCTGCCAAGCTACTCAAGGAGAAAATCCATACATTTGGCAGTGTTGGGCAGTTTTGGAAGATAAGATGGGAAATACGAGGAGAGCAAGGGAATTATTTGATGCGGCCACGGTTGCTGATAAGAAGCACATTGCTGCCTGGCATGGATGGGGAGTTTTAGAGCTAAAGCAAGGAAATATCAGCAAGGCAAGGCATCTGCTGGCCAAAGGTTTGAAATTTTGTGGTGGGAATGAATACATATACCAGACGCTGGCAAGATTGGAAGCTAAAGCAAGTCGCTATGAGCAGGCTCGCTACCTGTTCAGGCAGGCCACTAAATGCAATCCCAAAAGCTGTGCTAGTTGGCTTGCGTGGGCTCAAATGGAGATGCAACAGGAAAACAATCGTGCTGCTAGGCAACTTTTTGAGAGATCAATACAGGCAAGCCCAAAGAATAGGTTTGCATGGCATGTTTGGGGACTTTTTGAAGCTAAAATGGGAAGTGTTGAGAAGGGGAGAAAGTTATTAAAGATTGGCCATGCACTCAATCCAAGGGATCCAGTTCTCCTTCAGTCTCTTGCTTTATTGGAATATGAATACTCAACTGCAAATCTTGCTCGACAGTTGTTCAGGCGAGCATCTGAGTTGGATCCAAGGCATCAACCAGTGTGGATGGCTTGGGGATGGATGGAATGGAAAGAAGGAAACATTACCACAGCAAGGAAATTATACCAAAAAGCATTGTCTATTAACTCAACTAGTGAAACTGCTGCTCGCTGCCTACAGGCTTGGGGAGTTCTAGAACAGAGAATTGGTAACCTATCAGCAGCCCGGAGATTATTTAGGTCCTCTCTCAATATAAATTCTCAGAGTTATGTCACATGGATGACTTGGGCATCACTTGAGGAAAATCAAGGGAACTCTGTCCGTGCAGAGGAAATTCGTGATCTCTATTTCCAGCAGCGCACTGAAGTTGTGGATGATGCTTCATGGGTTATGGGATTGTTGGACATCATAGATCCAGCACTTGACAGAATTAGGAGTGTCTTGAACTTGGATCAAGCCTCCCAACAAAGTCGACTAGATTCTCTCAGAACAATACTAGAAGGAGAAAATGGAAATAACATTGATGAAGAGTCAGATAGCAATGACATGGAAAGTGAGAGTGGCTTTGATGTGGATGCTTTCTGTATAGAAAGATTATCTTTGGATCCATCTAAGCTACAAGTTCAGATGGAATTCTCACTGCCTTCACCAGTAAAGAGATCTAGAGAGAAAGTCTTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006139 GO:0006396 GO:0006397 GO:0006417 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009639 GO:0009657 GO:0009889 GO:0009892 GO:0009941 GO:0009987 GO:0010114 GO:0010467 GO:0010468 GO:0010556 GO:0010605 GO:0010608 GO:0016020 GO:0016043 GO:0016070 GO:0016071 GO:0019219 GO:0019222 GO:0031090 GO:0031323 GO:0031324 GO:0031326 GO:0031967 GO:0031969 GO:0031975 GO:0032069 GO:0032074 GO:0032268 GO:0034248 GO:0034641 GO:0042170 GO:0043086 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043621 GO:0044092 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051246 GO:0051252 GO:0051253 GO:0051336 GO:0051346 GO:0060255 GO:0060700 GO:0060701 GO:0065007 GO:0065009 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0098588 GO:0098805 GO:1901360 GO:1901363 GO:1901917 GO:1901918 GO:1905777 GO:1905778 GO:2000112

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_16 TPR_8

Protein Analysis

610

Amino Acids

69.12

Weight (kDa)

8.71

Isoelectric Point (pI)

48.34

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004751)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G17040 AT3G17040 AT3G17040 AT3G17040
fragaria_vesca	FvH4_4g19660 FvH4_4g19660 FvH4_4g19660 FvH4_4g19660 FvH4_4g19660 FvH4_4g19660
malus_domestica	MD13G1154800.v1.1
prunus_persica	Prupe.1G117800_v2.0.a1 Prupe.1G117800_v2.0.a1
pyrus_communis	pycom13g13160
rosa_chinensis	RchiOBHm_Chr4g0425111
rosa_laevigata	RLG00000007402
rosa_multiflora	Rmu_ssc0000420.1_g000027
rosa_roxburghii	Rroxscaffold_1G00031740 Rroxscaffold_5G00367180
rosa_rugosa	Rorug01G0106900 Rorug04G0201600 Rorug04G0201700
rosa_samantha	Rh1AG082100 Rh1BG099300 Rh4AG258300 Rh4BG263900 Rh4CG275000 Rh4DG259800
rosa_wichuraiana	Rw0G003480 Rw1G016170 Rw4G022330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	294
AccB1I	GGYRCC	1 cut(s)	344
AccB7I	CCANNNNNTGG	1 cut(s)	817
AccI	GTMKAC	2 cut(s)	196, 1624
AciI	CCGC	7 cut(s)	174, 207, 241, 249, 348, 433, 671
AcoI	YGGCCR	5 cut(s)	479, 540, 672, 768, 1081
AcsI	RAATTY	5 cut(s)	89, 782, 1408, 1485, 1784
AcuI	CTGAAG	3 cut(s)	462, 1100, 1536
AcyI	GRCGYC	3 cut(s)	171, 291, 345
AfaI	GTAC	1 cut(s)	404
AfiI	CCNNNNNNNGG	6 cut(s)	341, 488, 549, 817, 1266, 1480
AflII	CTTAAG	1 cut(s)	520
AgsI	TTSAA	7 cut(s)	36, 100, 379, 461, 781, 1034, 1597
AhlI	ACTAGT	1 cut(s)	1304
AjnI	CCWGG	1 cut(s)	704
AjuI	GAANNNNNNNTTGG	8 cut(s)	80, 112, 371, 377, 403, 409, 1341, 1373
AluBI	AGCT	9 cut(s)	259, 410, 497, 578, 730, 833, 900, 1037, 1768
AluI	AGCT	9 cut(s)	259, 410, 497, 578, 730, 833, 900, 1037, 1768
Alw21I	GWGCWC	1 cut(s)	261
Alw26I	GTCTC	1 cut(s)	1125
AlwNI	CAGNNNCTG	1 cut(s)	817
Ama87I	CYCGRG	1 cut(s)	549
AoxI	GGCC	8 cut(s)	245, 479, 516, 540, 672, 768, 876, 1081
ApeKI	GCWGC	9 cut(s)	4, 135, 570, 701, 956, 1316, 1323, 1373, 1507
ApoI	RAATTY	5 cut(s)	89, 782, 1408, 1485, 1784
AspLEI	GCGC	2 cut(s)	347, 1512
AspS9I	GGNCC	2 cut(s)	246, 1392
AsuC2I	CCSGG	4 cut(s)	352, 550, 551, 1378
AsuHPI	GGTGA	3 cut(s)	85, 394, 1791
AvaI	CYCGRG	1 cut(s)	549
AvaII	GGWCC	1 cut(s)	1392
BalI	TGGCCA	2 cut(s)	770, 1083
BamHI	GGATCC	4 cut(s)	358, 1102, 1195, 1756
BanI	GGYRCC	1 cut(s)	344
BanII	GRGCYC	4 cut(s)	261, 300, 336, 925
BbsI	GAAGAC	1 cut(s)	542
Bbv12I	GWGCWC	1 cut(s)	261
BbvI	GCAGC	9 cut(s)	16, 122, 557, 688, 943, 1303, 1310, 1385, 1519
BccI	CCATC	9 cut(s)	293, 482, 628, 708, 1213, 1224, 1228, 1768, 1774
BceAI	ACGGC	4 cut(s)	161, 194, 358, 555
BciT130I	CCWGG	1 cut(s)	706
BcnI	CCSGG	4 cut(s)	352, 550, 551, 1378
BcoDI	GTCTC	1 cut(s)	1125
BcuI	ACTAGT	1 cut(s)	1304
BfaI	CTAG	9 cut(s)	75, 227, 906, 960, 1305, 1346, 1628, 1649, 1815
BfmI	CTRYAG	1 cut(s)	1328
BfoI	RGCGCY	1 cut(s)	348
BfrI	CTTAAG	1 cut(s)	520
BglII	AGATCT	2 cut(s)	414, 1811
Bme1390I	CCNGG	5 cut(s)	352, 550, 551, 706, 1378
Bme18I	GGWCC	1 cut(s)	1392
BmeT110I	CYCGRG	1 cut(s)	549
BmgT120I	GGNCC	2 cut(s)	246, 1392
BmiI	GGNNCC	5 cut(s)	346, 360, 1104, 1197, 1758
BmrFI	CCNGG	5 cut(s)	352, 550, 551, 706, 1378
BmsI	GCATC	8 cut(s)	658, 769, 924, 1193, 1213, 1451, 1519, 1717
BpiI	GAAGAC	1 cut(s)	542
BplI	GAGNNNNNCTC	2 cut(s)	248, 280
BpuEI	CTTGAG	2 cut(s)	567, 1469
BpuMI	CCSGG	4 cut(s)	352, 550, 551, 1378
BsaAI	YACGTR	1 cut(s)	502
BsaHI	GRCGYC	3 cut(s)	171, 291, 345
BsaJI	CCNNGG	5 cut(s)	252, 549, 675, 1097, 1199
BsaXI	ACNNNNNCTCC	4 cut(s)	146, 149, 176, 179
Bsc4I	CCNNNNNNNGG	6 cut(s)	341, 488, 549, 817, 1266, 1480
Bse118I	RCCGGY	1 cut(s)	243
Bse1I	ACTGG	3 cut(s)	1106, 1211, 1802
Bse3DI	GCAATG	2 cut(s)	696, 1699
BseBI	CCWGG	1 cut(s)	706
BseDI	CCNNGG	5 cut(s)	252, 549, 675, 1097, 1199
BseGI	GGATG	7 cut(s)	719, 1224, 1235, 1239, 1437, 1531, 1732
BseLI	CCNNNNNNNGG	6 cut(s)	341, 488, 549, 817, 1266, 1480
BseMI	GCAATG	2 cut(s)	696, 1699
BseMII	CTCAG	3 cut(s)	1179, 1427, 1651
BseNI	ACTGG	3 cut(s)	1106, 1211, 1802
BseRI	GAGGAG	3 cut(s)	140, 154, 661
BseX3I	CGGCCG	1 cut(s)	540
BseXI	GCAGC	9 cut(s)	16, 122, 557, 688, 943, 1303, 1310, 1385, 1519
BsgI	GTGCAG	1 cut(s)	1497
Bsh1285I	CGRYCG	1 cut(s)	543
BshFI	GGCC	8 cut(s)	247, 481, 518, 542, 674, 770, 878, 1083
BshNI	GGYRCC	1 cut(s)	344
BsiEI	CGRYCG	1 cut(s)	543
BsiHKAI	GWGCWC	1 cut(s)	261
BsiHKCI	CYCGRG	1 cut(s)	549
BsiSI	CCGG	6 cut(s)	215, 244, 351, 482, 550, 1378
BslFI	GGGAC	1 cut(s)	1038
BslI	CCNNNNNNNGG	6 cut(s)	341, 488, 549, 817, 1266, 1480
BsmAI	GTCTC	1 cut(s)	1125
BsmFI	GGGAC	1 cut(s)	1038
BsnI	GGCC	8 cut(s)	247, 481, 518, 542, 674, 770, 878, 1083
BsoBI	CYCGRG	1 cut(s)	549
Bsp1286I	GDGCHC	4 cut(s)	261, 300, 336, 925
Bsp1407I	TGTACA	1 cut(s)	402
Bsp19I	CCATGG	1 cut(s)	252
BspACI	CCGC	7 cut(s)	174, 207, 241, 249, 348, 433, 671
BspANI	GGCC	8 cut(s)	247, 481, 518, 542, 674, 770, 878, 1083
BspCNI	CTCAG	3 cut(s)	1180, 1426, 1650
BspLI	GGNNCC	5 cut(s)	346, 360, 1104, 1197, 1758
BspT107I	GGYRCC	1 cut(s)	344
BspTI	CTTAAG	1 cut(s)	520
BsrDI	GCAATG	2 cut(s)	696, 1699
BsrFI	RCCGGY	1 cut(s)	243
BsrGI	TGTACA	1 cut(s)	402
BsrI	ACTGG	3 cut(s)	1106, 1211, 1802
BssAI	RCCGGY	1 cut(s)	243
BssECI	CCNNGG	5 cut(s)	252, 549, 675, 1097, 1199
BssNI	GRCGYC	3 cut(s)	171, 291, 345
BssT1I	CCWWGG	3 cut(s)	252, 1097, 1199
Bst2UI	CCWGG	1 cut(s)	706
Bst4CI	ACNGT	2 cut(s)	679, 1170
Bst6I	CTCTTC	2 cut(s)	59, 1674
BstACI	GRCGYC	3 cut(s)	171, 291, 345
BstAFI	CTTAAG	1 cut(s)	520
BstAPI	GCANNNNNTGC	1 cut(s)	1160
BstAUI	TGTACA	1 cut(s)	402
BstBAI	YACGTR	1 cut(s)	502
BstDEI	CTNAG	5 cut(s)	411, 1188, 1413, 1637, 1764
BstDSI	CCRYGG	2 cut(s)	252, 675
BstEII	GGTNACC	1 cut(s)	1361
BstF5I	GGATG	7 cut(s)	719, 1224, 1235, 1239, 1437, 1531, 1732
BstH2I	RGCGCY	1 cut(s)	348
BstHHI	GCGC	2 cut(s)	347, 1512
BstMAI	GTCTC	1 cut(s)	1125
BstMCI	CGRYCG	1 cut(s)	543
BstMWI	GCNNNNNNNGC	4 cut(s)	308, 503, 680, 1160
BstNI	CCWGG	1 cut(s)	706
BstNSI	RCATGY	1 cut(s)	1019
BstPI	GGTNACC	1 cut(s)	1361
BstSCI	CCNGG	5 cut(s)	350, 548, 549, 704, 1376
BstSFI	CTRYAG	1 cut(s)	1328
BstV1I	GCAGC	9 cut(s)	16, 122, 557, 688, 943, 1303, 1310, 1385, 1519
BstV2I	GAAGAC	1 cut(s)	542
BstX2I	RGATCY	7 cut(s)	358, 414, 1102, 1195, 1564, 1756, 1811
BstXI	CCANNNNNNTGG	1 cut(s)	603
BstYI	RGATCY	7 cut(s)	358, 414, 1102, 1195, 1564, 1756, 1811
BstZI	CGGCCG	1 cut(s)	540
BsuRI	GGCC	8 cut(s)	247, 481, 518, 542, 674, 770, 878, 1083
BtgI	CCRYGG	2 cut(s)	252, 675
BtsCI	GGATG	7 cut(s)	719, 1224, 1235, 1239, 1437, 1531, 1732
BtsI	GCAGTG	2 cut(s)	614, 1790
BtsIMutI	CAGTG	4 cut(s)	614, 1218, 1512, 1790
CaiI	CAGNNNCTG	1 cut(s)	817
CfoI	GCGC	2 cut(s)	347, 1512
Cfr10I	RCCGGY	1 cut(s)	243
Cfr13I	GGNCC	2 cut(s)	246, 1392
Cfr9I	CCCGGG	1 cut(s)	549
CseI	GACGC	2 cut(s)	179, 823
Csp6I	GTAC	1 cut(s)	403
CspCI	CAANNNNNGTGG	2 cut(s)	1196, 1231
CviAII	CATG	8 cut(s)	253, 710, 1011, 1016, 1085, 1428, 1536, 1699
CviQI	GTAC	1 cut(s)	403
DdeI	CTNAG	5 cut(s)	411, 1188, 1413, 1637, 1764
DinI	GGCGCC	1 cut(s)	346
EaeI	YGGCCR	5 cut(s)	479, 540, 672, 768, 1081
EagI	CGGCCG	1 cut(s)	540
Eam1104I	CTCTTC	2 cut(s)	59, 1674
EarI	CTCTTC	2 cut(s)	59, 1674
EciI	GGCGGA	1 cut(s)	230
Ecl136II	GAGCTC	1 cut(s)	259
EclXI	CGGCCG	1 cut(s)	540
Eco130I	CCWWGG	3 cut(s)	252, 1097, 1199
Eco147I	AGGCCT	1 cut(s)	518
Eco24I	GRGCYC	4 cut(s)	261, 300, 336, 925
Eco47I	GGWCC	1 cut(s)	1392
Eco52I	CGGCCG	1 cut(s)	540
Eco53kI	GAGCTC	1 cut(s)	259
Eco57I	CTGAAG	3 cut(s)	462, 1100, 1536
Eco88I	CYCGRG	1 cut(s)	549
Eco91I	GGTNACC	1 cut(s)	1361
EcoICRI	GAGCTC	1 cut(s)	259
EcoO109I	RGGNCCY	1 cut(s)	1392
EcoO65I	GGTNACC	1 cut(s)	1361
EcoRI	GAATTC	1 cut(s)	1784
EcoRII	CCWGG	1 cut(s)	704
EcoT14I	CCWWGG	3 cut(s)	252, 1097, 1199
EcoT38I	GRGCYC	4 cut(s)	261, 300, 336, 925
EgeI	GGCGCC	1 cut(s)	346
EheI	GGCGCC	1 cut(s)	346
ErhI	CCWWGG	3 cut(s)	252, 1097, 1199
FaeI	CATG	8 cut(s)	256, 713, 1014, 1019, 1088, 1431, 1539, 1702
FalI	AAGNNNNNCTT	4 cut(s)	371, 403, 1735, 1767
FaqI	GGGAC	1 cut(s)	1038
FatI	CATG	8 cut(s)	252, 709, 1010, 1015, 1084, 1427, 1535, 1698
FauI	CCCGC	1 cut(s)	256
FblI	GTMKAC	2 cut(s)	196, 1624
FokI	GGATG	7 cut(s)	726, 1231, 1242, 1246, 1444, 1538, 1739
FriOI	GRGCYC	4 cut(s)	261, 300, 336, 925
FspBI	CTAG	9 cut(s)	75, 227, 906, 960, 1305, 1346, 1628, 1649, 1815
GlaI	GCGC	2 cut(s)	346, 1511
HaeII	RGCGCY	1 cut(s)	348
HaeIII	GGCC	8 cut(s)	247, 481, 518, 542, 674, 770, 878, 1083
HapII	CCGG	6 cut(s)	215, 244, 351, 482, 550, 1378
HgaI	GACGC	2 cut(s)	179, 823
HhaI	GCGC	2 cut(s)	347, 1512
Hin1I	GRCGYC	3 cut(s)	171, 291, 345
Hin1II	CATG	8 cut(s)	256, 713, 1014, 1019, 1088, 1431, 1539, 1702
Hin6I	GCGC	2 cut(s)	345, 1510
HinP1I	GCGC	2 cut(s)	345, 1510
HincII	GTYRAC	2 cut(s)	197, 1625
HindII	GTYRAC	2 cut(s)	197, 1625
HinfI	GANTC	4 cut(s)	161, 272, 1631, 1682
HpaII	CCGG	6 cut(s)	215, 244, 351, 482, 550, 1378
HphI	GGTGA	3 cut(s)	85, 394, 1791
Hpy166II	GTNNAC	3 cut(s)	197, 385, 1625
Hpy188I	TCNGA	9 cut(s)	169, 184, 268, 363, 1189, 1416, 1640, 1687, 1779
Hpy188III	TCNNGA	5 cut(s)	418, 1346, 1490, 1594, 1815
Hpy8I	GTNNAC	3 cut(s)	197, 385, 1625
Hpy99I	CGWCG	5 cut(s)	173, 188, 272, 293, 296
HpyAV	CCTTC	8 cut(s)	106, 373, 508, 1051, 1124, 1241, 1646, 1806
HpyCH4III	ACNGT	2 cut(s)	679, 1170
HpyCH4IV	ACGT	3 cut(s)	190, 291, 501
HpyCH4V	TGCA	7 cut(s)	4, 888, 937, 1010, 1088, 1154, 1478
HpyF10VI	GCNNNNNNNGC	4 cut(s)	308, 503, 680, 1160
HpyF3I	CTNAG	5 cut(s)	411, 1188, 1413, 1637, 1764
HpySE526I	ACGT	3 cut(s)	190, 291, 501
Hsp92I	GRCGYC	3 cut(s)	171, 291, 345
Hsp92II	CATG	8 cut(s)	256, 713, 1014, 1019, 1088, 1431, 1539, 1702
HspAI	GCGC	2 cut(s)	345, 1510
KasI	GGCGCC	1 cut(s)	344
KroI	GCCGGC	1 cut(s)	243
KroNI	GCCGGC	1 cut(s)	245
LmnI	GCTCC	3 cut(s)	143, 256, 264
Lsp1109I	GCAGC	9 cut(s)	16, 122, 557, 688, 943, 1303, 1310, 1385, 1519
LweI	GCATC	8 cut(s)	658, 769, 924, 1193, 1213, 1451, 1519, 1717
MaeI	CTAG	9 cut(s)	75, 227, 906, 960, 1305, 1346, 1628, 1649, 1815
MaeII	ACGT	3 cut(s)	190, 291, 501
MaeIII	GTNAC	2 cut(s)	1361, 1423
MflI	RGATCY	7 cut(s)	358, 414, 1102, 1195, 1564, 1756, 1811
MhlI	GDGCHC	4 cut(s)	261, 300, 336, 925
MlsI	TGGCCA	2 cut(s)	770, 1083
MluNI	TGGCCA	2 cut(s)	770, 1083
Mly113I	GGCGCC	1 cut(s)	345
MlyI	GAGTC	3 cut(s)	155, 281, 1691
MmeI	TCCRAC	6 cut(s)	192, 207, 291, 336, 1173, 1533
Mox20I	TGGCCA	2 cut(s)	770, 1083
MroNI	GCCGGC	1 cut(s)	243
MscI	TGGCCA	2 cut(s)	770, 1083
MseI	TTAA	3 cut(s)	521, 1073, 1296
MslI	CAYNNNNRTG	1 cut(s)	1430
Msp20I	TGGCCA	2 cut(s)	770, 1083
MspCI	CTTAAG	1 cut(s)	520
MspI	CCGG	6 cut(s)	215, 244, 351, 482, 550, 1378
MspR9I	CCNGG	5 cut(s)	352, 550, 551, 706, 1378
MvaI	CCWGG	1 cut(s)	706
MwoI	GCNNNNNNNGC	4 cut(s)	308, 503, 680, 1160
NaeI	GCCGGC	1 cut(s)	245
NarI	GGCGCC	1 cut(s)	345
NciI	CCSGG	4 cut(s)	352, 550, 551, 1378
NcoI	CCATGG	1 cut(s)	252
NgoMIV	GCCGGC	1 cut(s)	243
NlaIII	CATG	8 cut(s)	256, 713, 1014, 1019, 1088, 1431, 1539, 1702
NlaIV	GGNNCC	5 cut(s)	346, 360, 1104, 1197, 1758
NmuCI	GTSAC	1 cut(s)	1423
NspI	RCATGY	1 cut(s)	1019
PceI	AGGCCT	1 cut(s)	518
PcsI	WCGNNNNNNNCGW	1 cut(s)	165
PdiI	GCCGGC	1 cut(s)	245
PfeI	GAWTC	1 cut(s)	1631
PflMI	CCANNNNNTGG	1 cut(s)	817
PleI	GAGTC	3 cut(s)	155, 280, 1690
PluTI	GGCGCC	1 cut(s)	348
PpsI	GAGTC	3 cut(s)	155, 280, 1690
Ppu21I	YACGTR	1 cut(s)	502
PpuMI	RGGWCCY	1 cut(s)	1392
Psp124BI	GAGCTC	1 cut(s)	261
Psp5II	RGGWCCY	1 cut(s)	1392
Psp6I	CCWGG	1 cut(s)	704
PspEI	GGTNACC	1 cut(s)	1361
PspGI	CCWGG	1 cut(s)	704
PspN4I	GGNNCC	5 cut(s)	346, 360, 1104, 1197, 1758
PspPI	GGNCC	2 cut(s)	246, 1392
PspPPI	RGGWCCY	1 cut(s)	1392
PstNI	CAGNNNCTG	1 cut(s)	817
PsuI	RGATCY	7 cut(s)	358, 414, 1102, 1195, 1564, 1756, 1811
RsaI	GTAC	1 cut(s)	404
RsaNI	GTAC	1 cut(s)	403
RseI	CAYNNNNRTG	1 cut(s)	1430
SacI	GAGCTC	1 cut(s)	261
SalI	GTCGAC	2 cut(s)	195, 1623
SaqAI	TTAA	3 cut(s)	521, 1073, 1296
Sau96I	GGNCC	2 cut(s)	246, 1392
SchI	GAGTC	3 cut(s)	155, 281, 1691
ScrFI	CCNGG	5 cut(s)	352, 550, 551, 706, 1378
SduI	GDGCHC	4 cut(s)	261, 300, 336, 925
SfaNI	GCATC	8 cut(s)	658, 769, 924, 1193, 1213, 1451, 1519, 1717
SfcI	CTRYAG	1 cut(s)	1328
SfoI	GGCGCC	1 cut(s)	346
SinI	GGWCC	1 cut(s)	1392
SmaI	CCCGGG	1 cut(s)	551
SmiMI	CAYNNNNRTG	1 cut(s)	1430
SmlI	CTYRAG	3 cut(s)	520, 582, 1448
SmoI	CTYRAG	3 cut(s)	520, 582, 1448
SpeI	ACTAGT	1 cut(s)	1304
SrfI	GCCCGGGC	1 cut(s)	551
SseBI	AGGCCT	1 cut(s)	518
SsiI	CCGC	7 cut(s)	174, 207, 241, 249, 348, 433, 671
SspDI	GGCGCC	1 cut(s)	344
SspMI	CTAG	9 cut(s)	75, 227, 906, 960, 1305, 1346, 1628, 1649, 1815
SstI	GAGCTC	1 cut(s)	261
StuI	AGGCCT	1 cut(s)	518
StyD4I	CCNGG	5 cut(s)	350, 548, 549, 704, 1376
StyI	CCWWGG	3 cut(s)	252, 1097, 1199
TaaI	ACNGT	2 cut(s)	679, 1170
TaiI	ACGT	3 cut(s)	193, 294, 504
TaqI	TCGA	7 cut(s)	153, 196, 288, 330, 533, 1165, 1624
TatI	WGTACW	1 cut(s)	402
TauI	GCSGC	4 cut(s)	176, 209, 350, 674
TfiI	GAWTC	1 cut(s)	1631
Tru1I	TTAA	3 cut(s)	521, 1073, 1296
Tru9I	TTAA	3 cut(s)	521, 1073, 1296
TscAI	CASTG	4 cut(s)	614, 1218, 1519, 1797
TseFI	GTSAC	1 cut(s)	1423
TseI	GCWGC	9 cut(s)	4, 135, 570, 701, 956, 1316, 1323, 1373, 1507
Tsp45I	GTSAC	1 cut(s)	1423
TspDTI	ATGAA	4 cut(s)	813, 1155, 1524, 1692
TspGWI	ACGGA	1 cut(s)	1463
TspMI	CCCGGG	1 cut(s)	549
TspRI	CASTG	4 cut(s)	614, 1218, 1519, 1797
Van91I	CCANNNNNTGG	1 cut(s)	817
Vha464I	CTTAAG	1 cut(s)	520
VpaK11BI	GGWCC	1 cut(s)	1392
XapI	RAATTY	5 cut(s)	89, 782, 1408, 1485, 1784
XbaI	TCTAGA	2 cut(s)	1345, 1814
XceI	RCATGY	1 cut(s)	1019
XmaI	CCCGGG	1 cut(s)	549
XmiI	GTMKAC	2 cut(s)	196, 1624
XspI	CTAG	9 cut(s)	75, 227, 906, 960, 1305, 1346, 1628, 1649, 1815
ZraI	GACGTC	1 cut(s)	292

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.