Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0004751

Physical Location & Seq

Genomic Coordinates Forward (+)

47724309 .. 47728034

Gene Structure 3726 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG259800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1296 bp

ATGCAGCAACTGCTCTCTTCTTCTTCTTCTTCAAACCCCAACTTCACTCTTTTCTCCACCTCCCCAAACCCTAACCACCTCTCCAAATTCACCTTCAAAATCCCCAATCTACCCCTCCACTCCCCTCCACGCTGCTCCACCCAACTCCTCGACCACGACTCCTCCAACGCCGCCGTTTCCGACGAACGTAGTGGACCCAATGCCGCCGTGCCGGAAACAAAACGAGCACTCGTCGTCCGCCGGCCCGCCATGGAGCTCCCCTCCGACGAGTCGGGTTCCCCCATCGACGTCGGGCTCGCCAAGTTCGCCAAGAAGATTGCGATATTCGAGCCCCAAGACGGCGCCGCCGGGTTGGATCCTAAAGAGAAGCCATTGAAGGTGAACTTGGACTTGGCATTGTACAGAGCTAAGATGTTGACCAGAAATTACCGCTATGCTGAAGCACAGCAAATACTTGAAAAGTGTATATATTATTGGCCGGAAGATGGGAGAGCTTATGTGGCATTGGGGAAGGCCTTAAGCAAACAATCGAAGACGGCCGAAGCCCGGGCTGTGTATGAGAAAGGCTGCCAAGCTACTCAAGGAGAAAATCCATACATTTGGCAGTGTTGGGCAGTTTTGGAAGATAGGATGGGAAATACGAGGAGAGCAAGGGAATTATTTGATGCGGCCACGGTTGCTGATAAGAAGCACATTGCTGCCTGGCATGGATGGGGAGTTTTAGAGCTGAAGCAAGGAAATATCAGCAAGGCAAGGCATCTGCTGGCCAAAGGTTTGAAATTTTGTGGTGGGAATGAGTACATATACCAGACGCTGGCAAGATTGGAAGCTAAAGCAAGTCGCTATGAGCAGGCTCGCTACTTGTTCAGCCAGGCCACTAAATGCAATCCCAAAAGCTGTGCTAGTTGGCTTGCGTGGGCTCAAATGGAGATGCAACAGGAAAACAATCGTGCTGCTAGGCAACTTTTTGAGAGATCAATACAGGCAAGCCCAAAGAATAGGTTTGCATGGCATGTTTGGGGACTTTTTGAAGCTAAAATGGGAAATGTTGACAAGGGGAGAAAATTATTAAAGATTGGCCATGCACTCAATCCAAGGGATCCAGTTCTCCTTCAGTCTCTTGCTTTATTGGAATATGAATACTCGACTGCAAATCTTGCTCGACAGTTGTTCAGGCGAGCATCTGAGTTGGATCCAAGGCATCAGCCAGTGTGGACGGTGAGAAACTCTTTTCAGTACAGAGATAAGTCTGATGCGCTTTGTATCTGTTTGGGACTACCACCTGATAAATTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006139 GO:0006396 GO:0006397 GO:0006417 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009639 GO:0009657 GO:0009889 GO:0009892 GO:0009941 GO:0009987 GO:0010114 GO:0010467 GO:0010468 GO:0010556 GO:0010605 GO:0010608 GO:0016020 GO:0016043 GO:0016070 GO:0016071 GO:0019219 GO:0019222 GO:0031090 GO:0031323 GO:0031324 GO:0031326 GO:0031967 GO:0031969 GO:0031975 GO:0032069 GO:0032074 GO:0032268 GO:0034248 GO:0034641 GO:0042170 GO:0043086 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043621 GO:0044092 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051246 GO:0051252 GO:0051253 GO:0051336 GO:0051346 GO:0060255 GO:0060700 GO:0060701 GO:0065007 GO:0065009 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0098588 GO:0098805 GO:1901360 GO:1901363 GO:1901917 GO:1901918 GO:1905777 GO:1905778 GO:2000112

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_16 TPR_8

Protein Analysis

431

Amino Acids

48.64

Weight (kDa)

9.46

Isoelectric Point (pI)

38.33

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004751)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G17040 AT3G17040 AT3G17040 AT3G17040
fragaria_vesca	FvH4_4g19660 FvH4_4g19660 FvH4_4g19660 FvH4_4g19660 FvH4_4g19660 FvH4_4g19660
malus_domestica	MD13G1154800.v1.1
prunus_persica	Prupe.1G117800_v2.0.a1 Prupe.1G117800_v2.0.a1
pyrus_communis	pycom13g13160
rosa_chinensis	RchiOBHm_Chr4g0425111
rosa_laevigata	RLG00000007402
rosa_multiflora	Rmu_ssc0000420.1_g000027
rosa_roxburghii	Rroxscaffold_1G00031740 Rroxscaffold_5G00367180
rosa_rugosa	Rorug01G0106900 Rorug04G0201600 Rorug04G0201700
rosa_samantha	Rh1AG082100 Rh1BG099300 Rh4AG258300 Rh4BG263900 Rh4CG275000 Rh4DG259800
rosa_wichuraiana	Rw0G003480 Rw1G016170 Rw4G022330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	291
AccB1I	GGYRCC	1 cut(s)	341
AccB7I	CCANNNNNTGG	1 cut(s)	814
AciI	CCGC	7 cut(s)	171, 204, 238, 246, 345, 430, 668
AclWI	GGATC	6 cut(s)	350, 363, 1094, 1107, 1187, 1200
AcoI	YGGCCR	5 cut(s)	476, 537, 669, 765, 1078
AcsI	RAATTY	2 cut(s)	86, 779
AcuI	CTGAAG	3 cut(s)	459, 749, 1097
AcyI	GRCGYC	2 cut(s)	288, 342
AfaI	GTAC	3 cut(s)	401, 800, 1238
AfiI	CCNNNNNNNGG	4 cut(s)	338, 485, 546, 814
AflII	CTTAAG	1 cut(s)	517
AgsI	TTSAA	6 cut(s)	33, 97, 376, 458, 778, 1031
AjnI	CCWGG	2 cut(s)	701, 870
AjuI	GAANNNNNNNTTGG	6 cut(s)	77, 109, 368, 374, 400, 406
AluBI	AGCT	8 cut(s)	256, 407, 494, 575, 727, 830, 897, 1034
AluI	AGCT	8 cut(s)	256, 407, 494, 575, 727, 830, 897, 1034
Alw21I	GWGCWC	2 cut(s)	229, 258
Alw26I	GTCTC	1 cut(s)	1122
AlwI	GGATC	6 cut(s)	350, 363, 1094, 1107, 1187, 1200
AlwNI	CAGNNNCTG	2 cut(s)	10, 814
Ama87I	CYCGRG	1 cut(s)	546
AoxI	GGCC	8 cut(s)	242, 476, 513, 537, 669, 765, 873, 1078
ApeKI	GCWGC	5 cut(s)	4, 132, 567, 698, 953
ApoI	RAATTY	2 cut(s)	86, 779
AspLEI	GCGC	2 cut(s)	344, 1258
AspS9I	GGNCC	2 cut(s)	194, 243
AsuC2I	CCSGG	3 cut(s)	349, 547, 548
AsuHPI	GGTGA	3 cut(s)	82, 391, 1231
AvaI	CYCGRG	1 cut(s)	546
AvaII	GGWCC	1 cut(s)	194
BalI	TGGCCA	2 cut(s)	767, 1080
BamHI	GGATCC	3 cut(s)	355, 1099, 1192
BanI	GGYRCC	1 cut(s)	341
BanII	GRGCYC	4 cut(s)	258, 297, 333, 922
BbsI	GAAGAC	1 cut(s)	539
Bbv12I	GWGCWC	2 cut(s)	229, 258
BbvI	GCAGC	5 cut(s)	16, 119, 554, 685, 940
BccI	CCATC	4 cut(s)	290, 479, 625, 705
BceAI	ACGGC	4 cut(s)	158, 191, 355, 552
BciT130I	CCWGG	2 cut(s)	703, 872
BcnI	CCSGG	3 cut(s)	349, 547, 548
BcoDI	GTCTC	1 cut(s)	1122
BfaI	CTAG	2 cut(s)	903, 957
BfoI	RGCGCY	1 cut(s)	345
BfrI	CTTAAG	1 cut(s)	517
BisI	GCNGC	9 cut(s)	5, 133, 171, 204, 345, 568, 669, 699, 954
BlsI	GCNGC	9 cut(s)	6, 134, 172, 205, 346, 569, 670, 700, 955
Bme1390I	CCNGG	5 cut(s)	349, 547, 548, 703, 872
Bme18I	GGWCC	1 cut(s)	194
BmeT110I	CYCGRG	1 cut(s)	546
BmgT120I	GGNCC	2 cut(s)	194, 243
BmiI	GGNNCC	6 cut(s)	196, 277, 343, 357, 1101, 1194
BmrFI	CCNGG	5 cut(s)	349, 547, 548, 703, 872
BmsI	GCATC	6 cut(s)	655, 766, 921, 1190, 1210, 1243
BpiI	GAAGAC	1 cut(s)	539
BplI	GAGNNNNNCTC	2 cut(s)	245, 277
BpuEI	CTTGAG	1 cut(s)	564
BpuMI	CCSGG	3 cut(s)	349, 547, 548
BsaHI	GRCGYC	2 cut(s)	288, 342
BsaJI	CCNNGG	5 cut(s)	249, 546, 672, 1094, 1196
BsaXI	ACNNNNNCTCC	6 cut(s)	65, 95, 143, 146, 173, 176
Bsc4I	CCNNNNNNNGG	4 cut(s)	338, 485, 546, 814
Bse118I	RCCGGY	1 cut(s)	240
Bse1I	ACTGG	2 cut(s)	1103, 1208
Bse3DI	GCAATG	1 cut(s)	693
BseBI	CCWGG	2 cut(s)	703, 872
BseDI	CCNNGG	5 cut(s)	249, 546, 672, 1094, 1196
BseGI	GGATG	2 cut(s)	636, 716
BseLI	CCNNNNNNNGG	4 cut(s)	338, 485, 546, 814
BseMI	GCAATG	1 cut(s)	693
BseMII	CTCAG	1 cut(s)	1176
BseNI	ACTGG	2 cut(s)	1103, 1208
BseRI	GAGGAG	3 cut(s)	137, 151, 658
BseX3I	CGGCCG	1 cut(s)	537
BseXI	GCAGC	5 cut(s)	16, 119, 554, 685, 940
Bsh1285I	CGRYCG	1 cut(s)	540
BshFI	GGCC	8 cut(s)	244, 478, 515, 539, 671, 767, 875, 1080
BshNI	GGYRCC	1 cut(s)	341
BsiEI	CGRYCG	1 cut(s)	540
BsiHKAI	GWGCWC	2 cut(s)	229, 258
BsiHKCI	CYCGRG	1 cut(s)	546
BsiSI	CCGG	5 cut(s)	212, 241, 348, 479, 547
BslFI	GGGAC	2 cut(s)	1035, 1287
BslI	CCNNNNNNNGG	4 cut(s)	338, 485, 546, 814
BsmAI	GTCTC	1 cut(s)	1122
BsmFI	GGGAC	2 cut(s)	1035, 1287
BsnI	GGCC	8 cut(s)	244, 478, 515, 539, 671, 767, 875, 1080
BsoBI	CYCGRG	1 cut(s)	546
Bsp1286I	GDGCHC	5 cut(s)	229, 258, 297, 333, 922
Bsp1407I	TGTACA	1 cut(s)	399
Bsp143I	GATC	4 cut(s)	355, 974, 1099, 1192
Bsp19I	CCATGG	1 cut(s)	249
BspACI	CCGC	7 cut(s)	171, 204, 238, 246, 345, 430, 668
BspANI	GGCC	8 cut(s)	244, 478, 515, 539, 671, 767, 875, 1080
BspCNI	CTCAG	1 cut(s)	1177
BspLI	GGNNCC	6 cut(s)	196, 277, 343, 357, 1101, 1194
BspPI	GGATC	6 cut(s)	350, 363, 1094, 1107, 1187, 1200
BspT107I	GGYRCC	1 cut(s)	341
BspTI	CTTAAG	1 cut(s)	517
BsrDI	GCAATG	1 cut(s)	693
BsrFI	RCCGGY	1 cut(s)	240
BsrGI	TGTACA	1 cut(s)	399
BsrI	ACTGG	2 cut(s)	1103, 1208
BssAI	RCCGGY	1 cut(s)	240
BssECI	CCNNGG	5 cut(s)	249, 546, 672, 1094, 1196
BssMI	GATC	4 cut(s)	355, 974, 1099, 1192
BssNI	GRCGYC	2 cut(s)	288, 342
BssT1I	CCWWGG	3 cut(s)	249, 1094, 1196
Bst2UI	CCWGG	2 cut(s)	703, 872
Bst4CI	ACNGT	3 cut(s)	676, 1167, 1219
Bst6I	CTCTTC	1 cut(s)	22
BstACI	GRCGYC	2 cut(s)	288, 342
BstAFI	CTTAAG	1 cut(s)	517
BstAPI	GCANNNNNTGC	2 cut(s)	10, 1157
BstAUI	TGTACA	1 cut(s)	399
BstDEI	CTNAG	2 cut(s)	408, 1185
BstDSI	CCRYGG	2 cut(s)	249, 672
BstF5I	GGATG	2 cut(s)	636, 716
BstH2I	RGCGCY	1 cut(s)	345
BstHHI	GCGC	2 cut(s)	344, 1258
BstKTI	GATC	4 cut(s)	358, 977, 1102, 1195
BstMAI	GTCTC	1 cut(s)	1122
BstMBI	GATC	4 cut(s)	355, 974, 1099, 1192
BstMCI	CGRYCG	1 cut(s)	540
BstMWI	GCNNNNNNNGC	5 cut(s)	10, 305, 500, 677, 1157
BstNI	CCWGG	2 cut(s)	703, 872
BstNSI	RCATGY	1 cut(s)	1016
BstSCI	CCNGG	5 cut(s)	347, 545, 546, 701, 870
BstV1I	GCAGC	5 cut(s)	16, 119, 554, 685, 940
BstV2I	GAAGAC	1 cut(s)	539
BstX2I	RGATCY	3 cut(s)	355, 1099, 1192
BstXI	CCANNNNNNTGG	1 cut(s)	600
BstYI	RGATCY	3 cut(s)	355, 1099, 1192
BstZI	CGGCCG	1 cut(s)	537
BsuRI	GGCC	8 cut(s)	244, 478, 515, 539, 671, 767, 875, 1080
BtgI	CCRYGG	2 cut(s)	249, 672
BtsCI	GGATG	2 cut(s)	636, 716
BtsI	GCAGTG	1 cut(s)	611
BtsIMutI	CAGTG	2 cut(s)	611, 1215
CaiI	CAGNNNCTG	2 cut(s)	10, 814
CfoI	GCGC	2 cut(s)	344, 1258
Cfr10I	RCCGGY	1 cut(s)	240
Cfr13I	GGNCC	2 cut(s)	194, 243
Cfr9I	CCCGGG	1 cut(s)	546
CseI	GACGC	1 cut(s)	820
Csp6I	GTAC	3 cut(s)	400, 799, 1237
CviAII	CATG	5 cut(s)	250, 707, 1008, 1013, 1082
CviQI	GTAC	3 cut(s)	400, 799, 1237
DdeI	CTNAG	2 cut(s)	408, 1185
DinI	GGCGCC	1 cut(s)	343
DpnI	GATC	4 cut(s)	357, 976, 1101, 1194
DpnII	GATC	4 cut(s)	355, 974, 1099, 1192
EaeI	YGGCCR	5 cut(s)	476, 537, 669, 765, 1078
EagI	CGGCCG	1 cut(s)	537
Eam1104I	CTCTTC	1 cut(s)	22
EarI	CTCTTC	1 cut(s)	22
EciI	GGCGGA	1 cut(s)	227
Ecl136II	GAGCTC	1 cut(s)	256
EclXI	CGGCCG	1 cut(s)	537
Eco130I	CCWWGG	3 cut(s)	249, 1094, 1196
Eco147I	AGGCCT	1 cut(s)	515
Eco24I	GRGCYC	4 cut(s)	258, 297, 333, 922
Eco47I	GGWCC	1 cut(s)	194
Eco52I	CGGCCG	1 cut(s)	537
Eco53kI	GAGCTC	1 cut(s)	256
Eco57I	CTGAAG	3 cut(s)	459, 749, 1097
Eco88I	CYCGRG	1 cut(s)	546
EcoICRI	GAGCTC	1 cut(s)	256
EcoRII	CCWGG	2 cut(s)	701, 870
EcoT14I	CCWWGG	3 cut(s)	249, 1094, 1196
EcoT38I	GRGCYC	4 cut(s)	258, 297, 333, 922
EgeI	GGCGCC	1 cut(s)	343
EheI	GGCGCC	1 cut(s)	343
ErhI	CCWWGG	3 cut(s)	249, 1094, 1196
FaeI	CATG	5 cut(s)	253, 710, 1011, 1016, 1085
FalI	AAGNNNNNCTT	2 cut(s)	368, 400
FaqI	GGGAC	2 cut(s)	1035, 1287
FatI	CATG	5 cut(s)	249, 706, 1007, 1012, 1081
FauI	CCCGC	1 cut(s)	253
Fnu4HI	GCNGC	9 cut(s)	5, 133, 171, 204, 345, 568, 669, 699, 954
FokI	GGATG	2 cut(s)	643, 723
FriOI	GRGCYC	4 cut(s)	258, 297, 333, 922
Fsp4HI	GCNGC	9 cut(s)	5, 133, 171, 204, 345, 568, 669, 699, 954
FspBI	CTAG	2 cut(s)	903, 957
GlaI	GCGC	2 cut(s)	343, 1257
GluI	GCNGC	9 cut(s)	5, 133, 171, 204, 345, 568, 669, 699, 954
HaeII	RGCGCY	1 cut(s)	345
HaeIII	GGCC	8 cut(s)	244, 478, 515, 539, 671, 767, 875, 1080
HapII	CCGG	5 cut(s)	212, 241, 348, 479, 547
HgaI	GACGC	1 cut(s)	820
HhaI	GCGC	2 cut(s)	344, 1258
Hin1I	GRCGYC	2 cut(s)	288, 342
Hin1II	CATG	5 cut(s)	253, 710, 1011, 1016, 1085
Hin6I	GCGC	2 cut(s)	342, 1256
HinP1I	GCGC	2 cut(s)	342, 1256
HincII	GTYRAC	2 cut(s)	417, 1051
HindII	GTYRAC	2 cut(s)	417, 1051
HinfI	GANTC	2 cut(s)	158, 269
HpaII	CCGG	5 cut(s)	212, 241, 348, 479, 547
HphI	GGTGA	3 cut(s)	82, 391, 1231
Hpy166II	GTNNAC	5 cut(s)	194, 382, 417, 1051, 1215
Hpy188I	TCNGA	4 cut(s)	181, 265, 1186, 1252
Hpy8I	GTNNAC	5 cut(s)	194, 382, 417, 1051, 1215
Hpy99I	CGWCG	5 cut(s)	185, 236, 269, 290, 293
HpyAV	CCTTC	4 cut(s)	103, 370, 505, 1121
HpyCH4III	ACNGT	3 cut(s)	676, 1167, 1219
HpyCH4IV	ACGT	2 cut(s)	187, 288
HpyCH4V	TGCA	6 cut(s)	4, 885, 934, 1007, 1085, 1151
HpyF10VI	GCNNNNNNNGC	5 cut(s)	10, 305, 500, 677, 1157
HpyF3I	CTNAG	2 cut(s)	408, 1185
HpySE526I	ACGT	2 cut(s)	187, 288
Hsp92I	GRCGYC	2 cut(s)	288, 342
Hsp92II	CATG	5 cut(s)	253, 710, 1011, 1016, 1085
HspAI	GCGC	2 cut(s)	342, 1256
KasI	GGCGCC	1 cut(s)	341
KroI	GCCGGC	1 cut(s)	240
KroNI	GCCGGC	1 cut(s)	242
Kzo9I	GATC	4 cut(s)	355, 974, 1099, 1192
LmnI	GCTCC	3 cut(s)	140, 253, 261
Lsp1109I	GCAGC	5 cut(s)	16, 119, 554, 685, 940
LweI	GCATC	6 cut(s)	655, 766, 921, 1190, 1210, 1243
MaeI	CTAG	2 cut(s)	903, 957
MaeII	ACGT	2 cut(s)	187, 288
MalI	GATC	4 cut(s)	357, 976, 1101, 1194
MboI	GATC	4 cut(s)	355, 974, 1099, 1192
MboII	GAAGA	9 cut(s)	9, 12, 15, 18, 21, 325, 494, 544, 635
MflI	RGATCY	3 cut(s)	355, 1099, 1192
MhlI	GDGCHC	5 cut(s)	229, 258, 297, 333, 922
MlsI	TGGCCA	2 cut(s)	767, 1080
MluCI	AATT	6 cut(s)	86, 424, 656, 779, 1064, 1289
MluNI	TGGCCA	2 cut(s)	767, 1080
Mly113I	GGCGCC	1 cut(s)	342
MlyI	GAGTC	2 cut(s)	152, 278
MmeI	TCCRAC	5 cut(s)	189, 204, 288, 333, 1170
MnlI	CCTC	8 cut(s)	70, 89, 125, 135, 158, 172, 271, 636
Mox20I	TGGCCA	2 cut(s)	767, 1080
MroNI	GCCGGC	1 cut(s)	240
MscI	TGGCCA	2 cut(s)	767, 1080
MseI	TTAA	2 cut(s)	518, 1070
Msp20I	TGGCCA	2 cut(s)	767, 1080
MspCI	CTTAAG	1 cut(s)	517
MspI	CCGG	5 cut(s)	212, 241, 348, 479, 547
MspR9I	CCNGG	5 cut(s)	349, 547, 548, 703, 872
MvaI	CCWGG	2 cut(s)	703, 872
MwoI	GCNNNNNNNGC	5 cut(s)	10, 305, 500, 677, 1157
NaeI	GCCGGC	1 cut(s)	242
NarI	GGCGCC	1 cut(s)	342
NciI	CCSGG	3 cut(s)	349, 547, 548
NcoI	CCATGG	1 cut(s)	249
NdeII	GATC	4 cut(s)	355, 974, 1099, 1192
NgoMIV	GCCGGC	1 cut(s)	240
NlaIII	CATG	5 cut(s)	253, 710, 1011, 1016, 1085
NlaIV	GGNNCC	6 cut(s)	196, 277, 343, 357, 1101, 1194
NspI	RCATGY	1 cut(s)	1016
PceI	AGGCCT	1 cut(s)	515
PdiI	GCCGGC	1 cut(s)	242
PflMI	CCANNNNNTGG	1 cut(s)	814
PkrI	GCNGC	9 cut(s)	6, 134, 172, 205, 346, 569, 670, 700, 955
PleI	GAGTC	2 cut(s)	152, 277
PluTI	GGCGCC	1 cut(s)	345
PpsI	GAGTC	2 cut(s)	152, 277
Psp124BI	GAGCTC	1 cut(s)	258
Psp6I	CCWGG	2 cut(s)	701, 870
PspGI	CCWGG	2 cut(s)	701, 870
PspN4I	GGNNCC	6 cut(s)	196, 277, 343, 357, 1101, 1194
PspPI	GGNCC	2 cut(s)	194, 243
PstNI	CAGNNNCTG	2 cut(s)	10, 814
PsuI	RGATCY	3 cut(s)	355, 1099, 1192
RsaI	GTAC	3 cut(s)	401, 800, 1238
RsaNI	GTAC	3 cut(s)	400, 799, 1237
SacI	GAGCTC	1 cut(s)	258
SaqAI	TTAA	2 cut(s)	518, 1070
SatI	GCNGC	9 cut(s)	5, 133, 171, 204, 345, 568, 669, 699, 954
Sau3AI	GATC	4 cut(s)	355, 974, 1099, 1192
Sau96I	GGNCC	2 cut(s)	194, 243
SchI	GAGTC	2 cut(s)	152, 278
ScrFI	CCNGG	5 cut(s)	349, 547, 548, 703, 872
SduI	GDGCHC	5 cut(s)	229, 258, 297, 333, 922
SfaNI	GCATC	6 cut(s)	655, 766, 921, 1190, 1210, 1243
SfoI	GGCGCC	1 cut(s)	343
SinI	GGWCC	1 cut(s)	194
SmaI	CCCGGG	1 cut(s)	548
SmlI	CTYRAG	2 cut(s)	517, 579
SmoI	CTYRAG	2 cut(s)	517, 579
SrfI	GCCCGGGC	1 cut(s)	548
Sse9I	AATT	6 cut(s)	86, 424, 656, 779, 1064, 1289
SseBI	AGGCCT	1 cut(s)	515
SsiI	CCGC	7 cut(s)	171, 204, 238, 246, 345, 430, 668
SspDI	GGCGCC	1 cut(s)	341
SspMI	CTAG	2 cut(s)	903, 957
SstI	GAGCTC	1 cut(s)	258
StuI	AGGCCT	1 cut(s)	515
StyD4I	CCNGG	5 cut(s)	347, 545, 546, 701, 870
StyI	CCWWGG	3 cut(s)	249, 1094, 1196
TaaI	ACNGT	3 cut(s)	676, 1167, 1219
TaiI	ACGT	2 cut(s)	190, 291
TaqI	TCGA	6 cut(s)	150, 285, 327, 530, 1145, 1162
TasI	AATT	6 cut(s)	86, 424, 656, 779, 1064, 1289
TatI	WGTACW	3 cut(s)	399, 798, 1236
TauI	GCSGC	4 cut(s)	173, 206, 347, 671
Tru1I	TTAA	2 cut(s)	518, 1070
Tru9I	TTAA	2 cut(s)	518, 1070
TscAI	CASTG	2 cut(s)	611, 1215
TseI	GCWGC	5 cut(s)	4, 132, 567, 698, 953
TspDTI	ATGAA	1 cut(s)	1152
TspMI	CCCGGG	1 cut(s)	546
TspRI	CASTG	2 cut(s)	611, 1215
Van91I	CCANNNNNTGG	1 cut(s)	814
Vha464I	CTTAAG	1 cut(s)	517
VpaK11BI	GGWCC	1 cut(s)	194
XapI	RAATTY	2 cut(s)	86, 779
XceI	RCATGY	1 cut(s)	1016
XmaI	CCCGGG	1 cut(s)	546
XspI	CTAG	2 cut(s)	903, 957
ZraI	GACGTC	1 cut(s)	289

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.