Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000420.1

Orthogroup ID

OG0004751

Physical Location & Seq

Genomic Coordinates Forward (+)

134564 .. 137595

Gene Structure 3032 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000420.1_g000027.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1842 bp

atgcagcaacttctctcttcttcttcaaaccccaacttcactctcttctccacctccccaaaccctaaccacctctccaaattcaccttcaaaatccccaatctacccctccactcccctccacgctgctcctcctcctcctcctccaccacccaactcctcgaccacgactcctccaacgccgccgtttccgacgaacgtagtggacccaatgccgccgtgccggaaacaaaacgagcactcgtcgtccgccggcccgccatggagctcccctccgacgagtcggcttcccccatcgacgtcgggctcgccaagttcgccaagaagattgcgatattcgagccccaagacggcgccgccgggttggatccgaaagagaagccattgaaggtgaacttggacttggcattgtacagagctaagatgttgaccagaaattaccgctatgctgaagcacagcaaatacttgaaaagtgtatatattactggccggaagatgggagagcttatgtggcattggggaaggccttaagcaaacaatcaaagacggccgaagcccgggctgtgtatgagaaaggctgccaagctactcaaggagaaaatccatacatttggcagtgttgggcagttttggaggataagatgggaaatacgaggagagcaagggaattatttgatgcggccacggttgctgataagaagcacattgctgcctggcatggatggggagttttagagctgaagcaaggaaatatcagcaaggcaaggcatctgctggccaaaggtttgaaattttgtggtgggaatgagtacatataccagacgctggcaagattggaagctaaagcaagtcgctatgagcaggctcgctacttgttcagccaggccactaaatgcaatcccaaaagctgtgctagttggcttgcgtgggctcaaatggagatgcaacaggaaaacaatcgtgctgctaggcaactttttgagagatcaatacaggcaagcccaaagaataggtttgcatggcatgtttggggactttttgaagctaaaatgggaaatgttgacaaggggagaaagttattaaagattggccatgcactcaatccaagggatccagttctccttcagtctcttgctttattggaatatgaatactcgactgcaaatcttgctcgacagttgttcaggcgagcatctgagttggatccaaggcatcagccagtgtggacggcttggggatggatggaatggaaagaaggaaacattgccacagcaaggaaattataccaaaaagcattgtctattaactcaactagtgaaactgctgctcgctgcctacaggcttggggagttctagaacagagaattggtaatctatcagcagcccggagattatttaggtcctctctcaacataaattctcagagttatgtcacatggatgacttgggcatcacttgaggaaaatcaagggaactctgtccgtgcagaggaaattcgtgatctctatttccagcagcgcactgaagttgtggatgatgcttcatgggttatgggattgttggacatcatagatccagcacttgacagaatcaggagtgtcttgaacttggatccagcctcccaacaaagtcgactagattctctcagaacaatactagaaggagaaaatggaaataacattgatgaagagtcagatagcaatgacatggaaagtgagagtggctttgatgtggatgctttctgtatggaaagattatctttggatccatctaagctacaagttcagatggaattctcactgccttcaccagtaaagagatctagagagaaagtcttatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006139 GO:0006396 GO:0006397 GO:0006417 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009639 GO:0009657 GO:0009889 GO:0009892 GO:0009941 GO:0009987 GO:0010114 GO:0010467 GO:0010468 GO:0010556 GO:0010605 GO:0010608 GO:0016020 GO:0016043 GO:0016070 GO:0016071 GO:0019219 GO:0019222 GO:0031090 GO:0031323 GO:0031324 GO:0031326 GO:0031967 GO:0031969 GO:0031975 GO:0032069 GO:0032074 GO:0032268 GO:0034248 GO:0034641 GO:0042170 GO:0043086 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043621 GO:0044092 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051246 GO:0051252 GO:0051253 GO:0051336 GO:0051346 GO:0060255 GO:0060700 GO:0060701 GO:0065007 GO:0065009 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0098588 GO:0098805 GO:1901360 GO:1901363 GO:1901917 GO:1901918 GO:1905777 GO:1905778 GO:2000112

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_16 TPR_8

Protein Analysis

613

Amino Acids

69.23

Weight (kDa)

8.75

Isoelectric Point (pI)

47.74

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004751)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G17040 AT3G17040 AT3G17040 AT3G17040
fragaria_vesca	FvH4_4g19660 FvH4_4g19660 FvH4_4g19660 FvH4_4g19660 FvH4_4g19660 FvH4_4g19660
malus_domestica	MD13G1154800.v1.1
prunus_persica	Prupe.1G117800_v2.0.a1 Prupe.1G117800_v2.0.a1
pyrus_communis	pycom13g13160
rosa_chinensis	RchiOBHm_Chr4g0425111
rosa_laevigata	RLG00000007402
rosa_multiflora	Rmu_ssc0000420.1_g000027
rosa_roxburghii	Rroxscaffold_1G00031740 Rroxscaffold_5G00367180
rosa_rugosa	Rorug01G0106900 Rorug04G0201600 Rorug04G0201700
rosa_samantha	Rh1AG082100 Rh1BG099300 Rh4AG258300 Rh4BG263900 Rh4CG275000 Rh4DG259800
rosa_wichuraiana	Rw0G003480 Rw1G016170 Rw4G022330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	303
AccB1I	GGYRCC	1 cut(s)	353
AccB7I	CCANNNNNTGG	1 cut(s)	826
AccI	GTMKAC	1 cut(s)	1633
AciI	CCGC	7 cut(s)	183, 216, 250, 258, 357, 442, 680
AcoI	YGGCCR	5 cut(s)	488, 549, 681, 777, 1090
AcsI	RAATTY	5 cut(s)	80, 791, 1417, 1494, 1793
AcuI	CTGAAG	4 cut(s)	471, 761, 1109, 1545
AcyI	GRCGYC	2 cut(s)	300, 354
AfaI	GTAC	2 cut(s)	413, 812
AfiI	CCNNNNNNNGG	6 cut(s)	350, 497, 558, 826, 1275, 1489
AflII	CTTAAG	1 cut(s)	529
AgsI	TTSAA	7 cut(s)	27, 91, 388, 470, 790, 1043, 1606
AhlI	ACTAGT	1 cut(s)	1313
AjnI	CCWGG	2 cut(s)	713, 882
AjuI	GAANNNNNNNTTGG	8 cut(s)	71, 103, 380, 386, 412, 418, 1350, 1382
AluBI	AGCT	9 cut(s)	268, 419, 506, 587, 739, 842, 909, 1046, 1777
AluI	AGCT	9 cut(s)	268, 419, 506, 587, 739, 842, 909, 1046, 1777
Alw21I	GWGCWC	2 cut(s)	241, 270
Alw26I	GTCTC	1 cut(s)	1134
AlwNI	CAGNNNCTG	1 cut(s)	826
Ama87I	CYCGRG	1 cut(s)	558
AoxI	GGCC	8 cut(s)	254, 488, 525, 549, 681, 777, 885, 1090
ApeKI	GCWGC	9 cut(s)	4, 126, 579, 710, 965, 1325, 1332, 1382, 1516
ApoI	RAATTY	5 cut(s)	80, 791, 1417, 1494, 1793
AspLEI	GCGC	2 cut(s)	356, 1521
AspS9I	GGNCC	3 cut(s)	206, 255, 1401
AsuC2I	CCSGG	4 cut(s)	361, 559, 560, 1387
AsuHPI	GGTGA	3 cut(s)	76, 403, 1800
AvaI	CYCGRG	1 cut(s)	558
AvaII	GGWCC	2 cut(s)	206, 1401
BalI	TGGCCA	2 cut(s)	779, 1092
BamHI	GGATCC	5 cut(s)	367, 1111, 1204, 1612, 1765
BanI	GGYRCC	1 cut(s)	353
BanII	GRGCYC	4 cut(s)	270, 309, 345, 934
Bbv12I	GWGCWC	2 cut(s)	241, 270
BbvI	GCAGC	9 cut(s)	16, 113, 566, 697, 952, 1312, 1319, 1394, 1528
BccI	CCATC	8 cut(s)	302, 491, 637, 717, 1233, 1237, 1777, 1783
BceAI	ACGGC	5 cut(s)	170, 203, 367, 564, 1245
BciT130I	CCWGG	2 cut(s)	715, 884
BcnI	CCSGG	4 cut(s)	361, 559, 560, 1387
BcoDI	GTCTC	1 cut(s)	1134
BcuI	ACTAGT	1 cut(s)	1313
BfaI	CTAG	7 cut(s)	915, 969, 1314, 1355, 1637, 1658, 1824
BfmI	CTRYAG	1 cut(s)	1337
BfoI	RGCGCY	1 cut(s)	357
BfrI	CTTAAG	1 cut(s)	529
BglII	AGATCT	1 cut(s)	1820
Bme1390I	CCNGG	6 cut(s)	361, 559, 560, 715, 884, 1387
Bme18I	GGWCC	2 cut(s)	206, 1401
BmeT110I	CYCGRG	1 cut(s)	558
BmgT120I	GGNCC	3 cut(s)	206, 255, 1401
BmiI	GGNNCC	7 cut(s)	208, 355, 369, 1113, 1206, 1614, 1767
BmrFI	CCNGG	6 cut(s)	361, 559, 560, 715, 884, 1387
BmsI	GCATC	8 cut(s)	667, 778, 933, 1202, 1222, 1460, 1528, 1726
BplI	GAGNNNNNCTC	2 cut(s)	257, 289
BpuEI	CTTGAG	2 cut(s)	576, 1478
BpuMI	CCSGG	4 cut(s)	361, 559, 560, 1387
BsaHI	GRCGYC	2 cut(s)	300, 354
BsaJI	CCNNGG	5 cut(s)	261, 558, 684, 1106, 1208
BsaXI	ACNNNNNCTCC	6 cut(s)	59, 89, 155, 158, 185, 188
Bsc4I	CCNNNNNNNGG	6 cut(s)	350, 497, 558, 826, 1275, 1489
Bse118I	RCCGGY	1 cut(s)	252
Bse1I	ACTGG	4 cut(s)	491, 1115, 1220, 1811
Bse3DI	GCAATG	3 cut(s)	705, 1263, 1708
BseBI	CCWGG	2 cut(s)	715, 884
BseDI	CCNNGG	5 cut(s)	261, 558, 684, 1106, 1208
BseGI	GGATG	6 cut(s)	728, 1244, 1248, 1446, 1540, 1741
BseLI	CCNNNNNNNGG	6 cut(s)	350, 497, 558, 826, 1275, 1489
BseMI	GCAATG	3 cut(s)	705, 1263, 1708
BseMII	CTCAG	3 cut(s)	1188, 1436, 1660
BseNI	ACTGG	4 cut(s)	491, 1115, 1220, 1811
BseRI	GAGGAG	8 cut(s)	121, 124, 127, 130, 133, 149, 163, 670
BseX3I	CGGCCG	1 cut(s)	549
BseXI	GCAGC	9 cut(s)	16, 113, 566, 697, 952, 1312, 1319, 1394, 1528
BsgI	GTGCAG	1 cut(s)	1506
Bsh1285I	CGRYCG	1 cut(s)	552
BshFI	GGCC	8 cut(s)	256, 490, 527, 551, 683, 779, 887, 1092
BshNI	GGYRCC	1 cut(s)	353
BsiEI	CGRYCG	1 cut(s)	552
BsiHKAI	GWGCWC	2 cut(s)	241, 270
BsiHKCI	CYCGRG	1 cut(s)	558
BsiSI	CCGG	6 cut(s)	224, 253, 360, 491, 559, 1387
BslFI	GGGAC	1 cut(s)	1047
BslI	CCNNNNNNNGG	6 cut(s)	350, 497, 558, 826, 1275, 1489
BsmAI	GTCTC	1 cut(s)	1134
BsmFI	GGGAC	1 cut(s)	1047
BsnI	GGCC	8 cut(s)	256, 490, 527, 551, 683, 779, 887, 1092
BsoBI	CYCGRG	1 cut(s)	558
Bsp1286I	GDGCHC	5 cut(s)	241, 270, 309, 345, 934
Bsp1407I	TGTACA	1 cut(s)	411
Bsp143I	GATC	9 cut(s)	367, 986, 1111, 1204, 1501, 1573, 1612, 1765, 1820
Bsp19I	CCATGG	1 cut(s)	261
BspACI	CCGC	7 cut(s)	183, 216, 250, 258, 357, 442, 680
BspANI	GGCC	8 cut(s)	256, 490, 527, 551, 683, 779, 887, 1092
BspCNI	CTCAG	3 cut(s)	1189, 1435, 1659
BspLI	GGNNCC	7 cut(s)	208, 355, 369, 1113, 1206, 1614, 1767
BspT107I	GGYRCC	1 cut(s)	353
BspTI	CTTAAG	1 cut(s)	529
BsrDI	GCAATG	3 cut(s)	705, 1263, 1708
BsrFI	RCCGGY	1 cut(s)	252
BsrGI	TGTACA	1 cut(s)	411
BsrI	ACTGG	4 cut(s)	491, 1115, 1220, 1811
BssAI	RCCGGY	1 cut(s)	252
BssECI	CCNNGG	5 cut(s)	261, 558, 684, 1106, 1208
BssMI	GATC	9 cut(s)	367, 986, 1111, 1204, 1501, 1573, 1612, 1765, 1820
BssNI	GRCGYC	2 cut(s)	300, 354
BssT1I	CCWWGG	3 cut(s)	261, 1106, 1208
Bst2UI	CCWGG	2 cut(s)	715, 884
Bst4CI	ACNGT	2 cut(s)	688, 1179
Bst6I	CTCTTC	3 cut(s)	22, 50, 1683
BstACI	GRCGYC	2 cut(s)	300, 354
BstAFI	CTTAAG	1 cut(s)	529
BstAPI	GCANNNNNTGC	1 cut(s)	1169
BstAUI	TGTACA	1 cut(s)	411
BstDEI	CTNAG	5 cut(s)	420, 1197, 1422, 1646, 1773
BstDSI	CCRYGG	2 cut(s)	261, 684
BstF5I	GGATG	6 cut(s)	728, 1244, 1248, 1446, 1540, 1741
BstH2I	RGCGCY	1 cut(s)	357
BstHHI	GCGC	2 cut(s)	356, 1521
BstKTI	GATC	9 cut(s)	370, 989, 1114, 1207, 1504, 1576, 1615, 1768, 1823
BstMAI	GTCTC	1 cut(s)	1134
BstMBI	GATC	9 cut(s)	367, 986, 1111, 1204, 1501, 1573, 1612, 1765, 1820
BstMCI	CGRYCG	1 cut(s)	552
BstMWI	GCNNNNNNNGC	4 cut(s)	317, 512, 689, 1169
BstNI	CCWGG	2 cut(s)	715, 884
BstNSI	RCATGY	1 cut(s)	1028
BstSCI	CCNGG	6 cut(s)	359, 557, 558, 713, 882, 1385
BstSFI	CTRYAG	1 cut(s)	1337
BstV1I	GCAGC	9 cut(s)	16, 113, 566, 697, 952, 1312, 1319, 1394, 1528
BstX2I	RGATCY	7 cut(s)	367, 1111, 1204, 1573, 1612, 1765, 1820
BstXI	CCANNNNNNTGG	1 cut(s)	612
BstYI	RGATCY	7 cut(s)	367, 1111, 1204, 1573, 1612, 1765, 1820
BstZI	CGGCCG	1 cut(s)	549
BsuRI	GGCC	8 cut(s)	256, 490, 527, 551, 683, 779, 887, 1092
BtgI	CCRYGG	2 cut(s)	261, 684
BtsCI	GGATG	6 cut(s)	728, 1244, 1248, 1446, 1540, 1741
BtsI	GCAGTG	2 cut(s)	623, 1799
BtsIMutI	CAGTG	4 cut(s)	623, 1227, 1521, 1799
CaiI	CAGNNNCTG	1 cut(s)	826
CfoI	GCGC	2 cut(s)	356, 1521
Cfr10I	RCCGGY	1 cut(s)	252
Cfr13I	GGNCC	3 cut(s)	206, 255, 1401
Cfr9I	CCCGGG	1 cut(s)	558
CseI	GACGC	1 cut(s)	832
Csp6I	GTAC	2 cut(s)	412, 811
CviAII	CATG	8 cut(s)	262, 719, 1020, 1025, 1094, 1437, 1545, 1708
CviQI	GTAC	2 cut(s)	412, 811
DdeI	CTNAG	5 cut(s)	420, 1197, 1422, 1646, 1773
DinI	GGCGCC	1 cut(s)	355
DpnI	GATC	9 cut(s)	369, 988, 1113, 1206, 1503, 1575, 1614, 1767, 1822
DpnII	GATC	9 cut(s)	367, 986, 1111, 1204, 1501, 1573, 1612, 1765, 1820
EaeI	YGGCCR	5 cut(s)	488, 549, 681, 777, 1090
EagI	CGGCCG	1 cut(s)	549
Eam1104I	CTCTTC	3 cut(s)	22, 50, 1683
EarI	CTCTTC	3 cut(s)	22, 50, 1683
EciI	GGCGGA	1 cut(s)	239
Ecl136II	GAGCTC	1 cut(s)	268
EclXI	CGGCCG	1 cut(s)	549
Eco130I	CCWWGG	3 cut(s)	261, 1106, 1208
Eco147I	AGGCCT	1 cut(s)	527
Eco24I	GRGCYC	4 cut(s)	270, 309, 345, 934
Eco47I	GGWCC	2 cut(s)	206, 1401
Eco52I	CGGCCG	1 cut(s)	549
Eco53kI	GAGCTC	1 cut(s)	268
Eco57I	CTGAAG	4 cut(s)	471, 761, 1109, 1545
Eco88I	CYCGRG	1 cut(s)	558
EcoICRI	GAGCTC	1 cut(s)	268
EcoO109I	RGGNCCY	1 cut(s)	1401
EcoRI	GAATTC	1 cut(s)	1793
EcoRII	CCWGG	2 cut(s)	713, 882
EcoT14I	CCWWGG	3 cut(s)	261, 1106, 1208
EcoT38I	GRGCYC	4 cut(s)	270, 309, 345, 934
EgeI	GGCGCC	1 cut(s)	355
EheI	GGCGCC	1 cut(s)	355
ErhI	CCWWGG	3 cut(s)	261, 1106, 1208
FaeI	CATG	8 cut(s)	265, 722, 1023, 1028, 1097, 1440, 1548, 1711
FalI	AAGNNNNNCTT	4 cut(s)	380, 412, 1744, 1776
FaqI	GGGAC	1 cut(s)	1047
FatI	CATG	8 cut(s)	261, 718, 1019, 1024, 1093, 1436, 1544, 1707
FauI	CCCGC	1 cut(s)	265
FblI	GTMKAC	1 cut(s)	1633
FokI	GGATG	6 cut(s)	735, 1251, 1255, 1453, 1547, 1748
FriOI	GRGCYC	4 cut(s)	270, 309, 345, 934
FspBI	CTAG	7 cut(s)	915, 969, 1314, 1355, 1637, 1658, 1824
GlaI	GCGC	2 cut(s)	355, 1520
HaeII	RGCGCY	1 cut(s)	357
HaeIII	GGCC	8 cut(s)	256, 490, 527, 551, 683, 779, 887, 1092
HapII	CCGG	6 cut(s)	224, 253, 360, 491, 559, 1387
HgaI	GACGC	1 cut(s)	832
HhaI	GCGC	2 cut(s)	356, 1521
Hin1I	GRCGYC	2 cut(s)	300, 354
Hin1II	CATG	8 cut(s)	265, 722, 1023, 1028, 1097, 1440, 1548, 1711
Hin6I	GCGC	2 cut(s)	354, 1519
HinP1I	GCGC	2 cut(s)	354, 1519
HincII	GTYRAC	3 cut(s)	429, 1063, 1634
HindII	GTYRAC	3 cut(s)	429, 1063, 1634
HinfI	GANTC	5 cut(s)	170, 281, 1590, 1640, 1691
HpaII	CCGG	6 cut(s)	224, 253, 360, 491, 559, 1387
HphI	GGTGA	3 cut(s)	76, 403, 1800
Hpy166II	GTNNAC	6 cut(s)	206, 394, 429, 1063, 1227, 1634
Hpy188I	TCNGA	8 cut(s)	193, 277, 372, 1198, 1425, 1649, 1696, 1788
Hpy188III	TCNNGA	5 cut(s)	1355, 1499, 1594, 1603, 1824
Hpy8I	GTNNAC	6 cut(s)	206, 394, 429, 1063, 1227, 1634
Hpy99I	CGWCG	5 cut(s)	197, 248, 281, 302, 305
HpyAV	CCTTC	7 cut(s)	97, 382, 517, 1133, 1250, 1655, 1815
HpyCH4III	ACNGT	2 cut(s)	688, 1179
HpyCH4IV	ACGT	2 cut(s)	199, 300
HpyCH4V	TGCA	7 cut(s)	4, 897, 946, 1019, 1097, 1163, 1487
HpyF10VI	GCNNNNNNNGC	4 cut(s)	317, 512, 689, 1169
HpyF3I	CTNAG	5 cut(s)	420, 1197, 1422, 1646, 1773
HpySE526I	ACGT	2 cut(s)	199, 300
Hsp92I	GRCGYC	2 cut(s)	300, 354
Hsp92II	CATG	8 cut(s)	265, 722, 1023, 1028, 1097, 1440, 1548, 1711
HspAI	GCGC	2 cut(s)	354, 1519
KasI	GGCGCC	1 cut(s)	353
KroI	GCCGGC	1 cut(s)	252
KroNI	GCCGGC	1 cut(s)	254
Kzo9I	GATC	9 cut(s)	367, 986, 1111, 1204, 1501, 1573, 1612, 1765, 1820
LmnI	GCTCC	3 cut(s)	134, 265, 273
Lsp1109I	GCAGC	9 cut(s)	16, 113, 566, 697, 952, 1312, 1319, 1394, 1528
LweI	GCATC	8 cut(s)	667, 778, 933, 1202, 1222, 1460, 1528, 1726
MaeI	CTAG	7 cut(s)	915, 969, 1314, 1355, 1637, 1658, 1824
MaeII	ACGT	2 cut(s)	199, 300
MaeIII	GTNAC	1 cut(s)	1432
MalI	GATC	9 cut(s)	369, 988, 1113, 1206, 1503, 1575, 1614, 1767, 1822
MboI	GATC	9 cut(s)	367, 986, 1111, 1204, 1501, 1573, 1612, 1765, 1820
MboII	GAAGA	7 cut(s)	9, 12, 15, 37, 337, 506, 1700
MflI	RGATCY	7 cut(s)	367, 1111, 1204, 1573, 1612, 1765, 1820
MhlI	GDGCHC	5 cut(s)	241, 270, 309, 345, 934
MlsI	TGGCCA	2 cut(s)	779, 1092
MluCI	AATT	9 cut(s)	80, 436, 668, 791, 1280, 1365, 1417, 1494, 1793
MluNI	TGGCCA	2 cut(s)	779, 1092
Mly113I	GGCGCC	1 cut(s)	354
MlyI	GAGTC	3 cut(s)	164, 290, 1700
MmeI	TCCRAC	6 cut(s)	201, 216, 300, 345, 1182, 1542
Mox20I	TGGCCA	2 cut(s)	779, 1092
MroNI	GCCGGC	1 cut(s)	252
MscI	TGGCCA	2 cut(s)	779, 1092
MseI	TTAA	3 cut(s)	530, 1082, 1305
MslI	CAYNNNNRTG	1 cut(s)	1439
Msp20I	TGGCCA	2 cut(s)	779, 1092
MspCI	CTTAAG	1 cut(s)	529
MspI	CCGG	6 cut(s)	224, 253, 360, 491, 559, 1387
MspR9I	CCNGG	6 cut(s)	361, 559, 560, 715, 884, 1387
MvaI	CCWGG	2 cut(s)	715, 884
MwoI	GCNNNNNNNGC	4 cut(s)	317, 512, 689, 1169
NaeI	GCCGGC	1 cut(s)	254
NarI	GGCGCC	1 cut(s)	354
NciI	CCSGG	4 cut(s)	361, 559, 560, 1387
NcoI	CCATGG	1 cut(s)	261
NdeII	GATC	9 cut(s)	367, 986, 1111, 1204, 1501, 1573, 1612, 1765, 1820
NgoMIV	GCCGGC	1 cut(s)	252
NlaIII	CATG	8 cut(s)	265, 722, 1023, 1028, 1097, 1440, 1548, 1711
NlaIV	GGNNCC	7 cut(s)	208, 355, 369, 1113, 1206, 1614, 1767
NmuCI	GTSAC	1 cut(s)	1432
NspI	RCATGY	1 cut(s)	1028
PceI	AGGCCT	1 cut(s)	527
PdiI	GCCGGC	1 cut(s)	254
PfeI	GAWTC	2 cut(s)	1590, 1640
PflMI	CCANNNNNTGG	1 cut(s)	826
PleI	GAGTC	3 cut(s)	164, 289, 1699
PluTI	GGCGCC	1 cut(s)	357
PpsI	GAGTC	3 cut(s)	164, 289, 1699
PpuMI	RGGWCCY	1 cut(s)	1401
Psp124BI	GAGCTC	1 cut(s)	270
Psp5II	RGGWCCY	1 cut(s)	1401
Psp6I	CCWGG	2 cut(s)	713, 882
PspGI	CCWGG	2 cut(s)	713, 882
PspN4I	GGNNCC	7 cut(s)	208, 355, 369, 1113, 1206, 1614, 1767
PspPI	GGNCC	3 cut(s)	206, 255, 1401
PspPPI	RGGWCCY	1 cut(s)	1401
PstNI	CAGNNNCTG	1 cut(s)	826
PsuI	RGATCY	7 cut(s)	367, 1111, 1204, 1573, 1612, 1765, 1820
RsaI	GTAC	2 cut(s)	413, 812
RsaNI	GTAC	2 cut(s)	412, 811
RseI	CAYNNNNRTG	1 cut(s)	1439
SacI	GAGCTC	1 cut(s)	270
SalI	GTCGAC	1 cut(s)	1632
SaqAI	TTAA	3 cut(s)	530, 1082, 1305
Sau3AI	GATC	9 cut(s)	367, 986, 1111, 1204, 1501, 1573, 1612, 1765, 1820
Sau96I	GGNCC	3 cut(s)	206, 255, 1401
SchI	GAGTC	3 cut(s)	164, 290, 1700
ScrFI	CCNGG	6 cut(s)	361, 559, 560, 715, 884, 1387
SduI	GDGCHC	5 cut(s)	241, 270, 309, 345, 934
SfaNI	GCATC	8 cut(s)	667, 778, 933, 1202, 1222, 1460, 1528, 1726
SfcI	CTRYAG	1 cut(s)	1337
SfoI	GGCGCC	1 cut(s)	355
SinI	GGWCC	2 cut(s)	206, 1401
SmaI	CCCGGG	1 cut(s)	560
SmiMI	CAYNNNNRTG	1 cut(s)	1439
SmlI	CTYRAG	3 cut(s)	529, 591, 1457
SmoI	CTYRAG	3 cut(s)	529, 591, 1457
SpeI	ACTAGT	1 cut(s)	1313
SrfI	GCCCGGGC	1 cut(s)	560
Sse9I	AATT	9 cut(s)	80, 436, 668, 791, 1280, 1365, 1417, 1494, 1793
SseBI	AGGCCT	1 cut(s)	527
SsiI	CCGC	7 cut(s)	183, 216, 250, 258, 357, 442, 680
SspDI	GGCGCC	1 cut(s)	353
SspMI	CTAG	7 cut(s)	915, 969, 1314, 1355, 1637, 1658, 1824
SstI	GAGCTC	1 cut(s)	270
StuI	AGGCCT	1 cut(s)	527
StyD4I	CCNGG	6 cut(s)	359, 557, 558, 713, 882, 1385
StyI	CCWWGG	3 cut(s)	261, 1106, 1208
TaaI	ACNGT	2 cut(s)	688, 1179
TaiI	ACGT	2 cut(s)	202, 303
TaqI	TCGA	6 cut(s)	162, 297, 339, 1157, 1174, 1633
TasI	AATT	9 cut(s)	80, 436, 668, 791, 1280, 1365, 1417, 1494, 1793
TatI	WGTACW	2 cut(s)	411, 810
TauI	GCSGC	4 cut(s)	185, 218, 359, 683
TfiI	GAWTC	2 cut(s)	1590, 1640
Tru1I	TTAA	3 cut(s)	530, 1082, 1305
Tru9I	TTAA	3 cut(s)	530, 1082, 1305
TscAI	CASTG	4 cut(s)	623, 1227, 1528, 1806
TseFI	GTSAC	1 cut(s)	1432
TseI	GCWGC	9 cut(s)	4, 126, 579, 710, 965, 1325, 1332, 1382, 1516
Tsp45I	GTSAC	1 cut(s)	1432
TspDTI	ATGAA	3 cut(s)	1164, 1533, 1701
TspGWI	ACGGA	1 cut(s)	1472
TspMI	CCCGGG	1 cut(s)	558
TspRI	CASTG	4 cut(s)	623, 1227, 1528, 1806
Van91I	CCANNNNNTGG	1 cut(s)	826
Vha464I	CTTAAG	1 cut(s)	529
VpaK11BI	GGWCC	2 cut(s)	206, 1401
XapI	RAATTY	5 cut(s)	80, 791, 1417, 1494, 1793
XbaI	TCTAGA	2 cut(s)	1354, 1823
XceI	RCATGY	1 cut(s)	1028
XmaI	CCCGGG	1 cut(s)	558
XmiI	GTMKAC	1 cut(s)	1633
XspI	CTAG	7 cut(s)	915, 969, 1314, 1355, 1637, 1658, 1824
ZraI	GACGTC	1 cut(s)	301

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.