Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0004751

Physical Location & Seq

Genomic Coordinates Forward (+)

53080446 .. 53084122

Gene Structure 3677 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG275000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1299 bp

ATGCAGCAACTTCTCTCTTCTTCTTCTTCTTCTTCAAACCCCAACTTCACTCTCTTCTCCACCTCCCCAAACCCTAACCACCTCTCCAAATTCACCTTCAAAATCCCCAATCTACCCCTCCACTCCCCTCCACGCTGCTCCACCCAACTCCTCGACCACGACTCCTCCAACGCGGCCGTTTCCGAGGAACGTAGTCGACCCAATGCCGCCGTGCCGCAAACAAAACGAGCACTCGTCGTCCGCCGGCCCGCCATGGAGCTCCCCTCCGACGAGTCGGCTTCCCCCATCGACGTCGGGCTCGCCAAGTTCGCCAAGAAGATTGCGATATTCGAGCCCCAAGACGGCGCCGCGGGGTTGGATCCGAAAGAGAAGCCATTGAAGGTGAACTTGGACTTGGCATTGTACAGAGCTAAGATCTTGACCAGAAATTACCGCTATGCTGAAGCACAGCAAATACTTGAAAAGTGTATATATTATTGGCCGGAAGATGGGAGAGCTTACGTGGCATTGGGGAAGGCCTTAAGCAAACAATCGAAGACGGCCGAAGCCCGGGCTGTGTATGAGAAAGGCTGCCAAGCTACTCAAGGAGAAAATCCATACATTTGGCAGTGTTGGGCAGTTTTGGAAGATAAGATGGGAAATACGAGGAGAGCAAGGGAATTATTTGATGCGGCCACGGTTGCTGATAAGAAGCACATTGCTGCCTGGCATGGATGGGGAGTTTTAGAGCTAAAGCAAGGAAATATCAGCAAGGCAAGGCATCTGCTGGCCAAAGGTTTGAAATTTTGTGGTGGGAATGAGTACATATACCAGACGCTGGCAAGATTGGAAGCTAAAGCAAGTCGCTATGAGCAGGCTCGCTACTTGTTCAGGCAGGCCACTAAATGCAATCCCAAAAGCTGTGCTAGTTGGCTTGCGTGGGCTCAAATGGAGATGCAACAGGAAAACAATCGTGCTGCTAGGCAACTTTTTGAGAGATCAATACAGGCAAGCCCAAAGAATAGGTTTGCATGGCATGTTTGGGGACTTTTTGAAGCTAAAATGGGAAATGTTGAGAAGGGGAGAAAGTTATTAAAGATTGGCCATGCACTCAATCCAAGGGATCCAGTTCTCCTTCAGTCTCTTGCTTTATTGGAATATGAATACTCAACTGCAAATCTTGCTCGACGGTTGTTCAGGCGAGCATCTGAGTTGGATCCAAGGCATCAACCAGTGTGGACGGTGAGAAACTCTTTTCAGTACAGAGATAAGTCTGATGCGCTTTGTATCTGTTTGGGACTACCACCTGATAAATTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006139 GO:0006396 GO:0006397 GO:0006417 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009639 GO:0009657 GO:0009889 GO:0009892 GO:0009941 GO:0009987 GO:0010114 GO:0010467 GO:0010468 GO:0010556 GO:0010605 GO:0010608 GO:0016020 GO:0016043 GO:0016070 GO:0016071 GO:0019219 GO:0019222 GO:0031090 GO:0031323 GO:0031324 GO:0031326 GO:0031967 GO:0031969 GO:0031975 GO:0032069 GO:0032074 GO:0032268 GO:0034248 GO:0034641 GO:0042170 GO:0043086 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043621 GO:0044092 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051246 GO:0051252 GO:0051253 GO:0051336 GO:0051346 GO:0060255 GO:0060700 GO:0060701 GO:0065007 GO:0065009 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0098588 GO:0098805 GO:1901360 GO:1901363 GO:1901917 GO:1901918 GO:1905777 GO:1905778 GO:2000112

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_16 TPR_8

Protein Analysis

432

Amino Acids

48.92

Weight (kDa)

9.61

Isoelectric Point (pI)

42.5

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004751)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G17040 AT3G17040 AT3G17040 AT3G17040
fragaria_vesca	FvH4_4g19660 FvH4_4g19660 FvH4_4g19660 FvH4_4g19660 FvH4_4g19660 FvH4_4g19660
malus_domestica	MD13G1154800.v1.1
prunus_persica	Prupe.1G117800_v2.0.a1 Prupe.1G117800_v2.0.a1
pyrus_communis	pycom13g13160
rosa_chinensis	RchiOBHm_Chr4g0425111
rosa_laevigata	RLG00000007402
rosa_multiflora	Rmu_ssc0000420.1_g000027
rosa_roxburghii	Rroxscaffold_1G00031740 Rroxscaffold_5G00367180
rosa_rugosa	Rorug01G0106900 Rorug04G0201600 Rorug04G0201700
rosa_samantha	Rh1AG082100 Rh1BG099300 Rh4AG258300 Rh4BG263900 Rh4CG275000 Rh4DG259800
rosa_wichuraiana	Rw0G003480 Rw1G016170 Rw4G022330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	294
AccB1I	GGYRCC	1 cut(s)	344
AccB7I	CCANNNNNTGG	1 cut(s)	817
AccI	GTMKAC	1 cut(s)	196
AccII	CGCG	2 cut(s)	173, 350
AciI	CCGC	9 cut(s)	173, 207, 215, 241, 249, 348, 350, 433, 671
AclWI	GGATC	6 cut(s)	353, 366, 1097, 1110, 1190, 1203
AcoI	YGGCCR	6 cut(s)	174, 479, 540, 672, 768, 1081
AcsI	RAATTY	2 cut(s)	89, 782
AcuI	CTGAAG	2 cut(s)	462, 1100
AcyI	GRCGYC	2 cut(s)	291, 345
AfaI	GTAC	3 cut(s)	404, 803, 1241
AfiI	CCNNNNNNNGG	4 cut(s)	341, 488, 549, 817
AflII	CTTAAG	1 cut(s)	520
AgsI	TTSAA	6 cut(s)	36, 100, 379, 461, 781, 1034
AjnI	CCWGG	1 cut(s)	704
AjuI	GAANNNNNNNTTGG	6 cut(s)	80, 112, 371, 377, 403, 409
AluBI	AGCT	8 cut(s)	259, 410, 497, 578, 730, 833, 900, 1037
AluI	AGCT	8 cut(s)	259, 410, 497, 578, 730, 833, 900, 1037
Alw21I	GWGCWC	2 cut(s)	232, 261
Alw26I	GTCTC	1 cut(s)	1125
AlwI	GGATC	6 cut(s)	353, 366, 1097, 1110, 1190, 1203
AlwNI	CAGNNNCTG	1 cut(s)	817
Ama87I	CYCGRG	1 cut(s)	549
AoxI	GGCC	9 cut(s)	174, 245, 479, 516, 540, 672, 768, 876, 1081
ApeKI	GCWGC	5 cut(s)	4, 135, 570, 701, 956
ApoI	RAATTY	2 cut(s)	89, 782
AspLEI	GCGC	2 cut(s)	347, 1261
AspS9I	GGNCC	1 cut(s)	246
AsuC2I	CCSGG	2 cut(s)	550, 551
AsuHPI	GGTGA	3 cut(s)	85, 394, 1234
AvaI	CYCGRG	1 cut(s)	549
BalI	TGGCCA	2 cut(s)	770, 1083
BamHI	GGATCC	3 cut(s)	358, 1102, 1195
BanI	GGYRCC	1 cut(s)	344
BanII	GRGCYC	4 cut(s)	261, 300, 336, 925
BbsI	GAAGAC	1 cut(s)	542
Bbv12I	GWGCWC	2 cut(s)	232, 261
BbvI	GCAGC	5 cut(s)	16, 122, 557, 688, 943
BccI	CCATC	4 cut(s)	293, 482, 628, 708
BceAI	ACGGC	4 cut(s)	161, 194, 358, 555
BciT130I	CCWGG	1 cut(s)	706
BcnI	CCSGG	2 cut(s)	550, 551
BcoDI	GTCTC	1 cut(s)	1125
BfaI	CTAG	2 cut(s)	906, 960
BfoI	RGCGCY	1 cut(s)	348
BfrI	CTTAAG	1 cut(s)	520
BglII	AGATCT	1 cut(s)	414
Bme1390I	CCNGG	3 cut(s)	550, 551, 706
BmeT110I	CYCGRG	1 cut(s)	549
BmgT120I	GGNCC	1 cut(s)	246
BmiI	GGNNCC	4 cut(s)	346, 360, 1104, 1197
BmrFI	CCNGG	3 cut(s)	550, 551, 706
BmsI	GCATC	6 cut(s)	658, 769, 924, 1193, 1213, 1246
BpiI	GAAGAC	1 cut(s)	542
BplI	GAGNNNNNCTC	2 cut(s)	248, 280
BpuEI	CTTGAG	1 cut(s)	567
BpuMI	CCSGG	2 cut(s)	550, 551
BsaAI	YACGTR	1 cut(s)	502
BsaHI	GRCGYC	2 cut(s)	291, 345
BsaJI	CCNNGG	7 cut(s)	183, 252, 348, 549, 675, 1097, 1199
BsaXI	ACNNNNNCTCC	6 cut(s)	68, 98, 146, 149, 176, 179
Bsc4I	CCNNNNNNNGG	4 cut(s)	341, 488, 549, 817
Bse118I	RCCGGY	1 cut(s)	243
Bse1I	ACTGG	2 cut(s)	1106, 1211
Bse3DI	GCAATG	1 cut(s)	696
BseBI	CCWGG	1 cut(s)	706
BseDI	CCNNGG	7 cut(s)	183, 252, 348, 549, 675, 1097, 1199
BseGI	GGATG	1 cut(s)	719
BseLI	CCNNNNNNNGG	4 cut(s)	341, 488, 549, 817
BseMI	GCAATG	1 cut(s)	696
BseMII	CTCAG	1 cut(s)	1179
BseNI	ACTGG	2 cut(s)	1106, 1211
BseRI	GAGGAG	3 cut(s)	140, 154, 661
BseX3I	CGGCCG	2 cut(s)	174, 540
BseXI	GCAGC	5 cut(s)	16, 122, 557, 688, 943
Bsh1236I	CGCG	2 cut(s)	173, 350
Bsh1285I	CGRYCG	2 cut(s)	177, 543
BshFI	GGCC	9 cut(s)	176, 247, 481, 518, 542, 674, 770, 878, 1083
BshNI	GGYRCC	1 cut(s)	344
BsiEI	CGRYCG	2 cut(s)	177, 543
BsiHKAI	GWGCWC	2 cut(s)	232, 261
BsiHKCI	CYCGRG	1 cut(s)	549
BsiSI	CCGG	3 cut(s)	244, 482, 550
BslFI	GGGAC	2 cut(s)	1038, 1290
BslI	CCNNNNNNNGG	4 cut(s)	341, 488, 549, 817
BsmAI	GTCTC	1 cut(s)	1125
BsmFI	GGGAC	2 cut(s)	1038, 1290
BsnI	GGCC	9 cut(s)	176, 247, 481, 518, 542, 674, 770, 878, 1083
BsoBI	CYCGRG	1 cut(s)	549
Bsp1286I	GDGCHC	5 cut(s)	232, 261, 300, 336, 925
Bsp1407I	TGTACA	1 cut(s)	402
Bsp143I	GATC	5 cut(s)	358, 414, 977, 1102, 1195
Bsp19I	CCATGG	1 cut(s)	252
BspACI	CCGC	9 cut(s)	173, 207, 215, 241, 249, 348, 350, 433, 671
BspANI	GGCC	9 cut(s)	176, 247, 481, 518, 542, 674, 770, 878, 1083
BspCNI	CTCAG	1 cut(s)	1180
BspFNI	CGCG	2 cut(s)	173, 350
BspLI	GGNNCC	4 cut(s)	346, 360, 1104, 1197
BspPI	GGATC	6 cut(s)	353, 366, 1097, 1110, 1190, 1203
BspT107I	GGYRCC	1 cut(s)	344
BspTI	CTTAAG	1 cut(s)	520
BsrDI	GCAATG	1 cut(s)	696
BsrFI	RCCGGY	1 cut(s)	243
BsrGI	TGTACA	1 cut(s)	402
BsrI	ACTGG	2 cut(s)	1106, 1211
BssAI	RCCGGY	1 cut(s)	243
BssECI	CCNNGG	7 cut(s)	183, 252, 348, 549, 675, 1097, 1199
BssMI	GATC	5 cut(s)	358, 414, 977, 1102, 1195
BssNI	GRCGYC	2 cut(s)	291, 345
BssT1I	CCWWGG	3 cut(s)	252, 1097, 1199
Bst2UI	CCWGG	1 cut(s)	706
Bst4CI	ACNGT	3 cut(s)	679, 1170, 1222
Bst6I	CTCTTC	2 cut(s)	22, 59
BstACI	GRCGYC	2 cut(s)	291, 345
BstAFI	CTTAAG	1 cut(s)	520
BstAPI	GCANNNNNTGC	1 cut(s)	1160
BstAUI	TGTACA	1 cut(s)	402
BstBAI	YACGTR	1 cut(s)	502
BstDEI	CTNAG	2 cut(s)	411, 1188
BstDSI	CCRYGG	3 cut(s)	252, 348, 675
BstF5I	GGATG	1 cut(s)	719
BstFNI	CGCG	2 cut(s)	173, 350
BstH2I	RGCGCY	1 cut(s)	348
BstHHI	GCGC	2 cut(s)	347, 1261
BstKTI	GATC	5 cut(s)	361, 417, 980, 1105, 1198
BstMAI	GTCTC	1 cut(s)	1125
BstMBI	GATC	5 cut(s)	358, 414, 977, 1102, 1195
BstMCI	CGRYCG	2 cut(s)	177, 543
BstMWI	GCNNNNNNNGC	4 cut(s)	308, 503, 680, 1160
BstNI	CCWGG	1 cut(s)	706
BstNSI	RCATGY	1 cut(s)	1019
BstSCI	CCNGG	3 cut(s)	548, 549, 704
BstUI	CGCG	2 cut(s)	173, 350
BstV1I	GCAGC	5 cut(s)	16, 122, 557, 688, 943
BstV2I	GAAGAC	1 cut(s)	542
BstX2I	RGATCY	4 cut(s)	358, 414, 1102, 1195
BstXI	CCANNNNNNTGG	1 cut(s)	603
BstYI	RGATCY	4 cut(s)	358, 414, 1102, 1195
BstZI	CGGCCG	2 cut(s)	174, 540
BsuRI	GGCC	9 cut(s)	176, 247, 481, 518, 542, 674, 770, 878, 1083
BtgI	CCRYGG	3 cut(s)	252, 348, 675
BtsCI	GGATG	1 cut(s)	719
BtsI	GCAGTG	1 cut(s)	614
BtsIMutI	CAGTG	2 cut(s)	614, 1218
CaiI	CAGNNNCTG	1 cut(s)	817
CfoI	GCGC	2 cut(s)	347, 1261
Cfr10I	RCCGGY	1 cut(s)	243
Cfr13I	GGNCC	1 cut(s)	246
Cfr42I	CCGCGG	1 cut(s)	351
Cfr9I	CCCGGG	1 cut(s)	549
CseI	GACGC	1 cut(s)	823
Csp6I	GTAC	3 cut(s)	403, 802, 1240
CspCI	CAANNNNNGTGG	2 cut(s)	1196, 1231
CviAII	CATG	5 cut(s)	253, 710, 1011, 1016, 1085
CviQI	GTAC	3 cut(s)	403, 802, 1240
DdeI	CTNAG	2 cut(s)	411, 1188
DinI	GGCGCC	1 cut(s)	346
DpnI	GATC	5 cut(s)	360, 416, 979, 1104, 1197
DpnII	GATC	5 cut(s)	358, 414, 977, 1102, 1195
EaeI	YGGCCR	6 cut(s)	174, 479, 540, 672, 768, 1081
EagI	CGGCCG	2 cut(s)	174, 540
Eam1104I	CTCTTC	2 cut(s)	22, 59
EarI	CTCTTC	2 cut(s)	22, 59
EciI	GGCGGA	1 cut(s)	230
Ecl136II	GAGCTC	1 cut(s)	259
EclXI	CGGCCG	2 cut(s)	174, 540
Eco130I	CCWWGG	3 cut(s)	252, 1097, 1199
Eco147I	AGGCCT	1 cut(s)	518
Eco24I	GRGCYC	4 cut(s)	261, 300, 336, 925
Eco52I	CGGCCG	2 cut(s)	174, 540
Eco53kI	GAGCTC	1 cut(s)	259
Eco57I	CTGAAG	2 cut(s)	462, 1100
Eco88I	CYCGRG	1 cut(s)	549
EcoICRI	GAGCTC	1 cut(s)	259
EcoRII	CCWGG	1 cut(s)	704
EcoT14I	CCWWGG	3 cut(s)	252, 1097, 1199
EcoT38I	GRGCYC	4 cut(s)	261, 300, 336, 925
EgeI	GGCGCC	1 cut(s)	346
EheI	GGCGCC	1 cut(s)	346
ErhI	CCWWGG	3 cut(s)	252, 1097, 1199
FaeI	CATG	5 cut(s)	256, 713, 1014, 1019, 1088
FalI	AAGNNNNNCTT	2 cut(s)	371, 403
FaqI	GGGAC	2 cut(s)	1038, 1290
FatI	CATG	5 cut(s)	252, 709, 1010, 1015, 1084
FauI	CCCGC	2 cut(s)	256, 343
FblI	GTMKAC	1 cut(s)	196
FokI	GGATG	1 cut(s)	726
FriOI	GRGCYC	4 cut(s)	261, 300, 336, 925
FspBI	CTAG	2 cut(s)	906, 960
GlaI	GCGC	2 cut(s)	346, 1260
HaeII	RGCGCY	1 cut(s)	348
HaeIII	GGCC	9 cut(s)	176, 247, 481, 518, 542, 674, 770, 878, 1083
HapII	CCGG	3 cut(s)	244, 482, 550
HgaI	GACGC	1 cut(s)	823
HhaI	GCGC	2 cut(s)	347, 1261
Hin1I	GRCGYC	2 cut(s)	291, 345
Hin1II	CATG	5 cut(s)	256, 713, 1014, 1019, 1088
Hin6I	GCGC	2 cut(s)	345, 1259
HinP1I	GCGC	2 cut(s)	345, 1259
HincII	GTYRAC	1 cut(s)	197
HindII	GTYRAC	1 cut(s)	197
HinfI	GANTC	2 cut(s)	161, 272
HpaII	CCGG	3 cut(s)	244, 482, 550
HphI	GGTGA	3 cut(s)	85, 394, 1234
Hpy166II	GTNNAC	3 cut(s)	197, 385, 1218
Hpy188I	TCNGA	5 cut(s)	184, 268, 363, 1189, 1255
Hpy188III	TCNNGA	1 cut(s)	418
Hpy8I	GTNNAC	3 cut(s)	197, 385, 1218
Hpy99I	CGWCG	5 cut(s)	239, 272, 293, 296, 1170
HpyAV	CCTTC	5 cut(s)	106, 373, 508, 1051, 1124
HpyCH4III	ACNGT	3 cut(s)	679, 1170, 1222
HpyCH4IV	ACGT	3 cut(s)	190, 291, 501
HpyCH4V	TGCA	6 cut(s)	4, 888, 937, 1010, 1088, 1154
HpyF10VI	GCNNNNNNNGC	4 cut(s)	308, 503, 680, 1160
HpyF3I	CTNAG	2 cut(s)	411, 1188
HpySE526I	ACGT	3 cut(s)	190, 291, 501
Hsp92I	GRCGYC	2 cut(s)	291, 345
Hsp92II	CATG	5 cut(s)	256, 713, 1014, 1019, 1088
HspAI	GCGC	2 cut(s)	345, 1259
KasI	GGCGCC	1 cut(s)	344
KroI	GCCGGC	1 cut(s)	243
KroNI	GCCGGC	1 cut(s)	245
KspI	CCGCGG	1 cut(s)	351
Kzo9I	GATC	5 cut(s)	358, 414, 977, 1102, 1195
LmnI	GCTCC	3 cut(s)	143, 256, 264
Lsp1109I	GCAGC	5 cut(s)	16, 122, 557, 688, 943
LweI	GCATC	6 cut(s)	658, 769, 924, 1193, 1213, 1246
MaeI	CTAG	2 cut(s)	906, 960
MaeII	ACGT	3 cut(s)	190, 291, 501
MalI	GATC	5 cut(s)	360, 416, 979, 1104, 1197
MboI	GATC	5 cut(s)	358, 414, 977, 1102, 1195
MflI	RGATCY	4 cut(s)	358, 414, 1102, 1195
MhlI	GDGCHC	5 cut(s)	232, 261, 300, 336, 925
MlsI	TGGCCA	2 cut(s)	770, 1083
MluCI	AATT	5 cut(s)	89, 427, 659, 782, 1292
MluNI	TGGCCA	2 cut(s)	770, 1083
Mly113I	GGCGCC	1 cut(s)	345
MlyI	GAGTC	2 cut(s)	155, 281
MmeI	TCCRAC	4 cut(s)	192, 291, 336, 1173
MnlI	CCTC	9 cut(s)	73, 92, 128, 138, 161, 175, 178, 274, 639
Mox20I	TGGCCA	2 cut(s)	770, 1083
MroNI	GCCGGC	1 cut(s)	243
MscI	TGGCCA	2 cut(s)	770, 1083
MseI	TTAA	2 cut(s)	521, 1073
Msp20I	TGGCCA	2 cut(s)	770, 1083
MspA1I	CMGCKG	1 cut(s)	350
MspCI	CTTAAG	1 cut(s)	520
MspI	CCGG	3 cut(s)	244, 482, 550
MspR9I	CCNGG	3 cut(s)	550, 551, 706
MvaI	CCWGG	1 cut(s)	706
MvnI	CGCG	2 cut(s)	173, 350
MwoI	GCNNNNNNNGC	4 cut(s)	308, 503, 680, 1160
NaeI	GCCGGC	1 cut(s)	245
NarI	GGCGCC	1 cut(s)	345
NciI	CCSGG	2 cut(s)	550, 551
NcoI	CCATGG	1 cut(s)	252
NdeII	GATC	5 cut(s)	358, 414, 977, 1102, 1195
NgoMIV	GCCGGC	1 cut(s)	243
NlaIII	CATG	5 cut(s)	256, 713, 1014, 1019, 1088
NlaIV	GGNNCC	4 cut(s)	346, 360, 1104, 1197
NspI	RCATGY	1 cut(s)	1019
PceI	AGGCCT	1 cut(s)	518
PdiI	GCCGGC	1 cut(s)	245
PflMI	CCANNNNNTGG	1 cut(s)	817
PleI	GAGTC	2 cut(s)	155, 280
PluTI	GGCGCC	1 cut(s)	348
PpsI	GAGTC	2 cut(s)	155, 280
Ppu21I	YACGTR	1 cut(s)	502
Psp124BI	GAGCTC	1 cut(s)	261
Psp6I	CCWGG	1 cut(s)	704
PspGI	CCWGG	1 cut(s)	704
PspN4I	GGNNCC	4 cut(s)	346, 360, 1104, 1197
PspPI	GGNCC	1 cut(s)	246
PstNI	CAGNNNCTG	1 cut(s)	817
PsuI	RGATCY	4 cut(s)	358, 414, 1102, 1195
RsaI	GTAC	3 cut(s)	404, 803, 1241
RsaNI	GTAC	3 cut(s)	403, 802, 1240
SacI	GAGCTC	1 cut(s)	261
SacII	CCGCGG	1 cut(s)	351
SalI	GTCGAC	1 cut(s)	195
SaqAI	TTAA	2 cut(s)	521, 1073
Sau3AI	GATC	5 cut(s)	358, 414, 977, 1102, 1195
Sau96I	GGNCC	1 cut(s)	246
SchI	GAGTC	2 cut(s)	155, 281
ScrFI	CCNGG	3 cut(s)	550, 551, 706
SduI	GDGCHC	5 cut(s)	232, 261, 300, 336, 925
SfaNI	GCATC	6 cut(s)	658, 769, 924, 1193, 1213, 1246
SfoI	GGCGCC	1 cut(s)	346
Sfr303I	CCGCGG	1 cut(s)	351
SgrBI	CCGCGG	1 cut(s)	351
SmaI	CCCGGG	1 cut(s)	551
SmlI	CTYRAG	2 cut(s)	520, 582
SmoI	CTYRAG	2 cut(s)	520, 582
SrfI	GCCCGGGC	1 cut(s)	551
Sse9I	AATT	5 cut(s)	89, 427, 659, 782, 1292
SseBI	AGGCCT	1 cut(s)	518
SsiI	CCGC	9 cut(s)	173, 207, 215, 241, 249, 348, 350, 433, 671
SspDI	GGCGCC	1 cut(s)	344
SspMI	CTAG	2 cut(s)	906, 960
SstI	GAGCTC	1 cut(s)	261
StuI	AGGCCT	1 cut(s)	518
StyD4I	CCNGG	3 cut(s)	548, 549, 704
StyI	CCWWGG	3 cut(s)	252, 1097, 1199
TaaI	ACNGT	3 cut(s)	679, 1170, 1222
TaiI	ACGT	3 cut(s)	193, 294, 504
TaqI	TCGA	6 cut(s)	153, 196, 288, 330, 533, 1165
TasI	AATT	5 cut(s)	89, 427, 659, 782, 1292
TatI	WGTACW	3 cut(s)	402, 801, 1239
TauI	GCSGC	5 cut(s)	176, 209, 217, 350, 674
Tru1I	TTAA	2 cut(s)	521, 1073
Tru9I	TTAA	2 cut(s)	521, 1073
TscAI	CASTG	2 cut(s)	614, 1218
TseI	GCWGC	5 cut(s)	4, 135, 570, 701, 956
TspDTI	ATGAA	1 cut(s)	1155
TspMI	CCCGGG	1 cut(s)	549
TspRI	CASTG	2 cut(s)	614, 1218
Van91I	CCANNNNNTGG	1 cut(s)	817
Vha464I	CTTAAG	1 cut(s)	520
XapI	RAATTY	2 cut(s)	89, 782
XceI	RCATGY	1 cut(s)	1019
XmaI	CCCGGG	1 cut(s)	549
XmiI	GTMKAC	1 cut(s)	196
XspI	CTAG	2 cut(s)	906, 960
ZraI	GACGTC	1 cut(s)	292

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.