Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0004751

Physical Location & Seq

Genomic Coordinates Forward (+)

47687281 .. 47690330

Gene Structure 3050 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G022330.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1848 bp

ATGCAGCAACTTCTCTCTTCTTCTTCTTCTTCAAACCCCAACTTCACTCTTTTCTCCACCTCCCCAAACCCTAACCACCTCTCCAAATTCACCTTCAAAATCCCCAATCTACCCCTCCACTCCCCTCCACGCTGCTCCTCCTCCTCCTCCTCCACCACCCAACTCCTCGACCACGACTCCTCCAACGCCGCCGTTTCCGACGAACGTAGTGGACCCAATGCCGCCGTGCCGGAAACAAAACGAGCACTCGTCGTCCGCCGGCCAGCCATGGAGCCCCCCTCCGACGAGTCGGCTTCCCCCATCGACGTCGGGCTCGCTAAGTTCGCCAAGAAGATTGCGATATTCGAGCCCCAAGACGGCGCCGCCGGGTTGGATCCGAAAGAGAAGCCATTGAAGGTGAACTTGGACTTGGCATTGTACAGAGCTAAGATGTTGACCAGAAATTACCGCTATGCTGAAGCACAGCAAATACTTGAAAAGTGTATATATTACTGGCCGGAAGATGGGAGAGCTTATGTGGCATTGGGGAAGGCCTTAAGCAAACAATCAAAGCCGGCCGAAGCCCGGGCTGTGTATGAGAAAGGCTGCCAAGCTACTCAAGGAGAAAATCCATACATTTGGCAGTGTTGGGCAGTTTTGGAAGATAAGATGGGAAATACGAGGAGAGCAAGGGAATTATTTGATGCGGCCACGGTTGCTGATAAGAAGCACATTGCTGCCTGGCATGGATGGGGAGTTTTAGAGCTGAAGCAAGGAAATATCAGCAAGGCAAGGCATCTGCTGGCCAAAGGTTTGAAATTTTGTGGTGGGAATGAGTACATATACCAGACGCTGGCAAGATTGGAAGCTAAAGCAAGTCGCTATGAGCAGGCTCGCTACTTGTTCAGCCAGGCCACTAAATGCAATCCCAAAAGCTGTGCTAGTTGGCTTGCGTGGGCTCAAATGGAGATGCAACAGGAAAACAATCGTGCTGCTAGGCAACTTTTTGAGAGATCAATACAGGCAAGCCCAAAGAATAGGTTTGCATGGCATGTTTGGGGACTTTTTGAAGCTAAAATGGGGAATGTTGACAAGGGGAGAAAGTTATTAAAGATTGGCCATGCACTCAATCCAAGGGATCCAGTTCTCCTTCAGTCTCTTGCTTTATTGGAATATGAATACTCGACTGCAAATCTTGCTCGACAGTTGTTCAGGCGAGCATCTGAGTTGGATCCAAGGCATCAGCCAGTGTGGACGGCTTGGGGATGGATGGAATGGAAAGAAGGAAACATTGCCACAGCAAGGAAATTATACCAAAAAGCATTGTCTATTAACTCAACTAGTGAAACTGCTGCTCGCTGCCTACAGGCTTGGGGAGTTCTAGAACAGAGAATTGGTAATCTATCAGCAGCCCGGAGATTATTTAGGTCCTCTCTCAACATAAATTCTCAGAGTTATGTCACATGGATGACTTGGGCATCACTTGAGGAAAATCAAGGGAACTCTGTCCGTGCAGAGGAAATTCGTGATCTCTATTTCCAGCAGCGCACTGAAGTTGTGGATGATGCTTCATGGGTTATGGGATTGTTGGACATCATAGATCCAGCACTTGACAGAATCAGGAGTGTCTTGAACTTGGATCCAGCCTCCCAACAAAGTCGACTAGATTCTCTCAGAACAATACTAGAAGGAGAAAATGGAAATAACATTGATGAAGAGTCAGATAGCAATGACATGGAAAGTGAGAGTGGCTTTGATGTGGATGCTTTCTGTATGGAAAGATTATCTTTGGATCCATCTAAGCTACAAGTTCAGATGGAATTCTCACTGCCTTCACCAGTAAAGAGATCTAGAGAGAAAGTCTTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006139 GO:0006396 GO:0006397 GO:0006417 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009639 GO:0009657 GO:0009889 GO:0009892 GO:0009941 GO:0009987 GO:0010114 GO:0010467 GO:0010468 GO:0010556 GO:0010605 GO:0010608 GO:0016020 GO:0016043 GO:0016070 GO:0016071 GO:0019219 GO:0019222 GO:0031090 GO:0031323 GO:0031324 GO:0031326 GO:0031967 GO:0031969 GO:0031975 GO:0032069 GO:0032074 GO:0032268 GO:0034248 GO:0034641 GO:0042170 GO:0043086 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043621 GO:0044092 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051246 GO:0051252 GO:0051253 GO:0051336 GO:0051346 GO:0060255 GO:0060700 GO:0060701 GO:0065007 GO:0065009 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0098588 GO:0098805 GO:1901360 GO:1901363 GO:1901917 GO:1901918 GO:1905777 GO:1905778 GO:2000112

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_16 TPR_8

Protein Analysis

615

Amino Acids

69.39

Weight (kDa)

8.75

Isoelectric Point (pI)

48.75

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004751)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G17040 AT3G17040 AT3G17040 AT3G17040
fragaria_vesca	FvH4_4g19660 FvH4_4g19660 FvH4_4g19660 FvH4_4g19660 FvH4_4g19660 FvH4_4g19660
malus_domestica	MD13G1154800.v1.1
prunus_persica	Prupe.1G117800_v2.0.a1 Prupe.1G117800_v2.0.a1
pyrus_communis	pycom13g13160
rosa_chinensis	RchiOBHm_Chr4g0425111
rosa_laevigata	RLG00000007402
rosa_multiflora	Rmu_ssc0000420.1_g000027
rosa_roxburghii	Rroxscaffold_1G00031740 Rroxscaffold_5G00367180
rosa_rugosa	Rorug01G0106900 Rorug04G0201600 Rorug04G0201700
rosa_samantha	Rh1AG082100 Rh1BG099300 Rh4AG258300 Rh4BG263900 Rh4CG275000 Rh4DG259800
rosa_wichuraiana	Rw0G003480 Rw1G016170 Rw4G022330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	309
AccB1I	GGYRCC	1 cut(s)	359
AccB7I	CCANNNNNTGG	1 cut(s)	832
AccI	GTMKAC	1 cut(s)	1639
AciI	CCGC	6 cut(s)	189, 222, 256, 363, 448, 686
AcoI	YGGCCR	6 cut(s)	260, 494, 555, 687, 783, 1096
AcsI	RAATTY	5 cut(s)	86, 797, 1423, 1500, 1799
AcuI	CTGAAG	4 cut(s)	477, 767, 1115, 1551
AcyI	GRCGYC	2 cut(s)	306, 360
AfaI	GTAC	2 cut(s)	419, 818
AfiI	CCNNNNNNNGG	6 cut(s)	356, 503, 564, 832, 1281, 1495
AflII	CTTAAG	1 cut(s)	535
AgsI	TTSAA	7 cut(s)	33, 97, 394, 476, 796, 1049, 1612
AhlI	ACTAGT	1 cut(s)	1319
AjnI	CCWGG	2 cut(s)	719, 888
AjuI	GAANNNNNNNTTGG	8 cut(s)	77, 109, 386, 392, 418, 424, 1356, 1388
AluBI	AGCT	8 cut(s)	425, 512, 593, 745, 848, 915, 1052, 1783
AluI	AGCT	8 cut(s)	425, 512, 593, 745, 848, 915, 1052, 1783
Alw21I	GWGCWC	1 cut(s)	247
Alw26I	GTCTC	1 cut(s)	1140
AlwNI	CAGNNNCTG	1 cut(s)	832
Ama87I	CYCGRG	1 cut(s)	564
AoxI	GGCC	8 cut(s)	260, 494, 531, 555, 687, 783, 891, 1096
ApeKI	GCWGC	9 cut(s)	4, 132, 585, 716, 971, 1331, 1338, 1388, 1522
ApoI	RAATTY	5 cut(s)	86, 797, 1423, 1500, 1799
AspLEI	GCGC	2 cut(s)	362, 1527
AspS9I	GGNCC	2 cut(s)	212, 1407
AsuC2I	CCSGG	4 cut(s)	367, 565, 566, 1393
AsuHPI	GGTGA	3 cut(s)	82, 409, 1806
AvaI	CYCGRG	1 cut(s)	564
AvaII	GGWCC	2 cut(s)	212, 1407
BalI	TGGCCA	2 cut(s)	785, 1098
BamHI	GGATCC	5 cut(s)	373, 1117, 1210, 1618, 1771
BanI	GGYRCC	1 cut(s)	359
BanII	GRGCYC	4 cut(s)	276, 315, 351, 940
Bbv12I	GWGCWC	1 cut(s)	247
BbvI	GCAGC	9 cut(s)	16, 119, 572, 703, 958, 1318, 1325, 1400, 1534
BccI	CCATC	8 cut(s)	308, 497, 643, 723, 1239, 1243, 1783, 1789
BceAI	ACGGC	4 cut(s)	176, 209, 373, 1251
BciT130I	CCWGG	2 cut(s)	721, 890
BcnI	CCSGG	4 cut(s)	367, 565, 566, 1393
BcoDI	GTCTC	1 cut(s)	1140
BcuI	ACTAGT	1 cut(s)	1319
BfaI	CTAG	7 cut(s)	921, 975, 1320, 1361, 1643, 1664, 1830
BfmI	CTRYAG	1 cut(s)	1343
BfoI	RGCGCY	1 cut(s)	363
BfrI	CTTAAG	1 cut(s)	535
BglII	AGATCT	1 cut(s)	1826
Bme1390I	CCNGG	6 cut(s)	367, 565, 566, 721, 890, 1393
Bme18I	GGWCC	2 cut(s)	212, 1407
BmeT110I	CYCGRG	1 cut(s)	564
BmgT120I	GGNCC	2 cut(s)	212, 1407
BmiI	GGNNCC	8 cut(s)	214, 273, 361, 375, 1119, 1212, 1620, 1773
BmrFI	CCNGG	6 cut(s)	367, 565, 566, 721, 890, 1393
BmsI	GCATC	8 cut(s)	673, 784, 939, 1208, 1228, 1466, 1534, 1732
BplI	GAGNNNNNCTC	2 cut(s)	263, 295
BpuEI	CTTGAG	2 cut(s)	582, 1484
BpuMI	CCSGG	4 cut(s)	367, 565, 566, 1393
BsaHI	GRCGYC	2 cut(s)	306, 360
BsaJI	CCNNGG	5 cut(s)	267, 564, 690, 1112, 1214
BsaXI	ACNNNNNCTCC	6 cut(s)	65, 95, 161, 164, 191, 194
Bsc4I	CCNNNNNNNGG	6 cut(s)	356, 503, 564, 832, 1281, 1495
Bse118I	RCCGGY	2 cut(s)	258, 553
Bse1I	ACTGG	4 cut(s)	497, 1121, 1226, 1817
Bse3DI	GCAATG	3 cut(s)	711, 1269, 1714
BseBI	CCWGG	2 cut(s)	721, 890
BseDI	CCNNGG	5 cut(s)	267, 564, 690, 1112, 1214
BseGI	GGATG	6 cut(s)	734, 1250, 1254, 1452, 1546, 1747
BseLI	CCNNNNNNNGG	6 cut(s)	356, 503, 564, 832, 1281, 1495
BseMI	GCAATG	3 cut(s)	711, 1269, 1714
BseMII	CTCAG	3 cut(s)	1194, 1442, 1666
BseNI	ACTGG	4 cut(s)	497, 1121, 1226, 1817
BseRI	GAGGAG	8 cut(s)	127, 130, 133, 136, 139, 155, 169, 676
BseX3I	CGGCCG	1 cut(s)	555
BseXI	GCAGC	9 cut(s)	16, 119, 572, 703, 958, 1318, 1325, 1400, 1534
BsgI	GTGCAG	1 cut(s)	1512
Bsh1285I	CGRYCG	1 cut(s)	558
BshFI	GGCC	8 cut(s)	262, 496, 533, 557, 689, 785, 893, 1098
BshNI	GGYRCC	1 cut(s)	359
BsiEI	CGRYCG	1 cut(s)	558
BsiHKAI	GWGCWC	1 cut(s)	247
BsiHKCI	CYCGRG	1 cut(s)	564
BsiSI	CCGG	7 cut(s)	230, 259, 366, 497, 554, 565, 1393
BslFI	GGGAC	1 cut(s)	1053
BslI	CCNNNNNNNGG	6 cut(s)	356, 503, 564, 832, 1281, 1495
BsmAI	GTCTC	1 cut(s)	1140
BsmFI	GGGAC	1 cut(s)	1053
BsnI	GGCC	8 cut(s)	262, 496, 533, 557, 689, 785, 893, 1098
BsoBI	CYCGRG	1 cut(s)	564
Bsp1286I	GDGCHC	5 cut(s)	247, 276, 315, 351, 940
Bsp1407I	TGTACA	1 cut(s)	417
Bsp143I	GATC	9 cut(s)	373, 992, 1117, 1210, 1507, 1579, 1618, 1771, 1826
Bsp19I	CCATGG	1 cut(s)	267
BspACI	CCGC	6 cut(s)	189, 222, 256, 363, 448, 686
BspANI	GGCC	8 cut(s)	262, 496, 533, 557, 689, 785, 893, 1098
BspCNI	CTCAG	3 cut(s)	1195, 1441, 1665
BspLI	GGNNCC	8 cut(s)	214, 273, 361, 375, 1119, 1212, 1620, 1773
BspT107I	GGYRCC	1 cut(s)	359
BspTI	CTTAAG	1 cut(s)	535
BsrDI	GCAATG	3 cut(s)	711, 1269, 1714
BsrFI	RCCGGY	2 cut(s)	258, 553
BsrGI	TGTACA	1 cut(s)	417
BsrI	ACTGG	4 cut(s)	497, 1121, 1226, 1817
BssAI	RCCGGY	2 cut(s)	258, 553
BssECI	CCNNGG	5 cut(s)	267, 564, 690, 1112, 1214
BssMI	GATC	9 cut(s)	373, 992, 1117, 1210, 1507, 1579, 1618, 1771, 1826
BssNI	GRCGYC	2 cut(s)	306, 360
BssT1I	CCWWGG	3 cut(s)	267, 1112, 1214
Bst2UI	CCWGG	2 cut(s)	721, 890
Bst4CI	ACNGT	2 cut(s)	694, 1185
Bst6I	CTCTTC	2 cut(s)	22, 1689
BstACI	GRCGYC	2 cut(s)	306, 360
BstAFI	CTTAAG	1 cut(s)	535
BstAPI	GCANNNNNTGC	1 cut(s)	1175
BstAUI	TGTACA	1 cut(s)	417
BstDEI	CTNAG	6 cut(s)	318, 426, 1203, 1428, 1652, 1779
BstDSI	CCRYGG	2 cut(s)	267, 690
BstF5I	GGATG	6 cut(s)	734, 1250, 1254, 1452, 1546, 1747
BstH2I	RGCGCY	1 cut(s)	363
BstHHI	GCGC	2 cut(s)	362, 1527
BstKTI	GATC	9 cut(s)	376, 995, 1120, 1213, 1510, 1582, 1621, 1774, 1829
BstMAI	GTCTC	1 cut(s)	1140
BstMBI	GATC	9 cut(s)	373, 992, 1117, 1210, 1507, 1579, 1618, 1771, 1826
BstMCI	CGRYCG	1 cut(s)	558
BstMWI	GCNNNNNNNGC	4 cut(s)	323, 518, 695, 1175
BstNI	CCWGG	2 cut(s)	721, 890
BstNSI	RCATGY	1 cut(s)	1034
BstSCI	CCNGG	6 cut(s)	365, 563, 564, 719, 888, 1391
BstSFI	CTRYAG	1 cut(s)	1343
BstV1I	GCAGC	9 cut(s)	16, 119, 572, 703, 958, 1318, 1325, 1400, 1534
BstX2I	RGATCY	7 cut(s)	373, 1117, 1210, 1579, 1618, 1771, 1826
BstXI	CCANNNNNNTGG	1 cut(s)	618
BstYI	RGATCY	7 cut(s)	373, 1117, 1210, 1579, 1618, 1771, 1826
BstZI	CGGCCG	1 cut(s)	555
BsuRI	GGCC	8 cut(s)	262, 496, 533, 557, 689, 785, 893, 1098
BtgI	CCRYGG	2 cut(s)	267, 690
BtsCI	GGATG	6 cut(s)	734, 1250, 1254, 1452, 1546, 1747
BtsI	GCAGTG	2 cut(s)	629, 1805
BtsIMutI	CAGTG	4 cut(s)	629, 1233, 1527, 1805
CaiI	CAGNNNCTG	1 cut(s)	832
CfoI	GCGC	2 cut(s)	362, 1527
Cfr10I	RCCGGY	2 cut(s)	258, 553
Cfr13I	GGNCC	2 cut(s)	212, 1407
Cfr9I	CCCGGG	1 cut(s)	564
CseI	GACGC	1 cut(s)	838
Csp6I	GTAC	2 cut(s)	418, 817
CviAII	CATG	8 cut(s)	268, 725, 1026, 1031, 1100, 1443, 1551, 1714
CviQI	GTAC	2 cut(s)	418, 817
DdeI	CTNAG	6 cut(s)	318, 426, 1203, 1428, 1652, 1779
DinI	GGCGCC	1 cut(s)	361
DpnI	GATC	9 cut(s)	375, 994, 1119, 1212, 1509, 1581, 1620, 1773, 1828
DpnII	GATC	9 cut(s)	373, 992, 1117, 1210, 1507, 1579, 1618, 1771, 1826
EaeI	YGGCCR	6 cut(s)	260, 494, 555, 687, 783, 1096
EagI	CGGCCG	1 cut(s)	555
Eam1104I	CTCTTC	2 cut(s)	22, 1689
EarI	CTCTTC	2 cut(s)	22, 1689
EciI	GGCGGA	1 cut(s)	245
EclXI	CGGCCG	1 cut(s)	555
Eco130I	CCWWGG	3 cut(s)	267, 1112, 1214
Eco147I	AGGCCT	1 cut(s)	533
Eco24I	GRGCYC	4 cut(s)	276, 315, 351, 940
Eco47I	GGWCC	2 cut(s)	212, 1407
Eco52I	CGGCCG	1 cut(s)	555
Eco57I	CTGAAG	4 cut(s)	477, 767, 1115, 1551
Eco88I	CYCGRG	1 cut(s)	564
EcoO109I	RGGNCCY	1 cut(s)	1407
EcoRI	GAATTC	1 cut(s)	1799
EcoRII	CCWGG	2 cut(s)	719, 888
EcoT14I	CCWWGG	3 cut(s)	267, 1112, 1214
EcoT38I	GRGCYC	4 cut(s)	276, 315, 351, 940
EgeI	GGCGCC	1 cut(s)	361
EheI	GGCGCC	1 cut(s)	361
ErhI	CCWWGG	3 cut(s)	267, 1112, 1214
FaeI	CATG	8 cut(s)	271, 728, 1029, 1034, 1103, 1446, 1554, 1717
FalI	AAGNNNNNCTT	4 cut(s)	386, 418, 1750, 1782
FaqI	GGGAC	1 cut(s)	1053
FatI	CATG	8 cut(s)	267, 724, 1025, 1030, 1099, 1442, 1550, 1713
FblI	GTMKAC	1 cut(s)	1639
FokI	GGATG	6 cut(s)	741, 1257, 1261, 1459, 1553, 1754
FriOI	GRGCYC	4 cut(s)	276, 315, 351, 940
FspBI	CTAG	7 cut(s)	921, 975, 1320, 1361, 1643, 1664, 1830
GlaI	GCGC	2 cut(s)	361, 1526
HaeII	RGCGCY	1 cut(s)	363
HaeIII	GGCC	8 cut(s)	262, 496, 533, 557, 689, 785, 893, 1098
HapII	CCGG	7 cut(s)	230, 259, 366, 497, 554, 565, 1393
HgaI	GACGC	1 cut(s)	838
HhaI	GCGC	2 cut(s)	362, 1527
Hin1I	GRCGYC	2 cut(s)	306, 360
Hin1II	CATG	8 cut(s)	271, 728, 1029, 1034, 1103, 1446, 1554, 1717
Hin6I	GCGC	2 cut(s)	360, 1525
HinP1I	GCGC	2 cut(s)	360, 1525
HincII	GTYRAC	3 cut(s)	435, 1069, 1640
HindII	GTYRAC	3 cut(s)	435, 1069, 1640
HinfI	GANTC	5 cut(s)	176, 287, 1596, 1646, 1697
HpaII	CCGG	7 cut(s)	230, 259, 366, 497, 554, 565, 1393
HphI	GGTGA	3 cut(s)	82, 409, 1806
Hpy166II	GTNNAC	6 cut(s)	212, 400, 435, 1069, 1233, 1640
Hpy188I	TCNGA	8 cut(s)	199, 283, 378, 1204, 1431, 1655, 1702, 1794
Hpy188III	TCNNGA	5 cut(s)	1361, 1505, 1600, 1609, 1830
Hpy8I	GTNNAC	6 cut(s)	212, 400, 435, 1069, 1233, 1640
Hpy99I	CGWCG	5 cut(s)	203, 254, 287, 308, 311
HpyAV	CCTTC	7 cut(s)	103, 388, 523, 1139, 1256, 1661, 1821
HpyCH4III	ACNGT	2 cut(s)	694, 1185
HpyCH4IV	ACGT	2 cut(s)	205, 306
HpyCH4V	TGCA	7 cut(s)	4, 903, 952, 1025, 1103, 1169, 1493
HpyF10VI	GCNNNNNNNGC	4 cut(s)	323, 518, 695, 1175
HpyF3I	CTNAG	6 cut(s)	318, 426, 1203, 1428, 1652, 1779
HpySE526I	ACGT	2 cut(s)	205, 306
Hsp92I	GRCGYC	2 cut(s)	306, 360
Hsp92II	CATG	8 cut(s)	271, 728, 1029, 1034, 1103, 1446, 1554, 1717
HspAI	GCGC	2 cut(s)	360, 1525
KasI	GGCGCC	1 cut(s)	359
KroI	GCCGGC	2 cut(s)	258, 553
KroNI	GCCGGC	2 cut(s)	260, 555
Kzo9I	GATC	9 cut(s)	373, 992, 1117, 1210, 1507, 1579, 1618, 1771, 1826
LmnI	GCTCC	2 cut(s)	140, 271
Lsp1109I	GCAGC	9 cut(s)	16, 119, 572, 703, 958, 1318, 1325, 1400, 1534
LweI	GCATC	8 cut(s)	673, 784, 939, 1208, 1228, 1466, 1534, 1732
MaeI	CTAG	7 cut(s)	921, 975, 1320, 1361, 1643, 1664, 1830
MaeII	ACGT	2 cut(s)	205, 306
MaeIII	GTNAC	1 cut(s)	1438
MalI	GATC	9 cut(s)	375, 994, 1119, 1212, 1509, 1581, 1620, 1773, 1828
MboI	GATC	9 cut(s)	373, 992, 1117, 1210, 1507, 1579, 1618, 1771, 1826
MboII	GAAGA	9 cut(s)	9, 12, 15, 18, 21, 343, 512, 653, 1706
MflI	RGATCY	7 cut(s)	373, 1117, 1210, 1579, 1618, 1771, 1826
MhlI	GDGCHC	5 cut(s)	247, 276, 315, 351, 940
MlsI	TGGCCA	2 cut(s)	785, 1098
MluCI	AATT	9 cut(s)	86, 442, 674, 797, 1286, 1371, 1423, 1500, 1799
MluNI	TGGCCA	2 cut(s)	785, 1098
Mly113I	GGCGCC	1 cut(s)	360
MlyI	GAGTC	3 cut(s)	170, 296, 1706
MmeI	TCCRAC	6 cut(s)	207, 222, 306, 351, 1188, 1548
Mox20I	TGGCCA	2 cut(s)	785, 1098
MroNI	GCCGGC	2 cut(s)	258, 553
MscI	TGGCCA	2 cut(s)	785, 1098
MseI	TTAA	3 cut(s)	536, 1088, 1311
MslI	CAYNNNNRTG	1 cut(s)	1445
Msp20I	TGGCCA	2 cut(s)	785, 1098
MspCI	CTTAAG	1 cut(s)	535
MspI	CCGG	7 cut(s)	230, 259, 366, 497, 554, 565, 1393
MspR9I	CCNGG	6 cut(s)	367, 565, 566, 721, 890, 1393
MvaI	CCWGG	2 cut(s)	721, 890
MwoI	GCNNNNNNNGC	4 cut(s)	323, 518, 695, 1175
NaeI	GCCGGC	2 cut(s)	260, 555
NarI	GGCGCC	1 cut(s)	360
NciI	CCSGG	4 cut(s)	367, 565, 566, 1393
NcoI	CCATGG	1 cut(s)	267
NdeII	GATC	9 cut(s)	373, 992, 1117, 1210, 1507, 1579, 1618, 1771, 1826
NgoMIV	GCCGGC	2 cut(s)	258, 553
NlaIII	CATG	8 cut(s)	271, 728, 1029, 1034, 1103, 1446, 1554, 1717
NlaIV	GGNNCC	8 cut(s)	214, 273, 361, 375, 1119, 1212, 1620, 1773
NmuCI	GTSAC	1 cut(s)	1438
NspI	RCATGY	1 cut(s)	1034
PceI	AGGCCT	1 cut(s)	533
PdiI	GCCGGC	2 cut(s)	260, 555
PfeI	GAWTC	2 cut(s)	1596, 1646
PflMI	CCANNNNNTGG	1 cut(s)	832
PleI	GAGTC	3 cut(s)	170, 295, 1705
PluTI	GGCGCC	1 cut(s)	363
PpsI	GAGTC	3 cut(s)	170, 295, 1705
PpuMI	RGGWCCY	1 cut(s)	1407
Psp5II	RGGWCCY	1 cut(s)	1407
Psp6I	CCWGG	2 cut(s)	719, 888
PspGI	CCWGG	2 cut(s)	719, 888
PspN4I	GGNNCC	8 cut(s)	214, 273, 361, 375, 1119, 1212, 1620, 1773
PspPI	GGNCC	2 cut(s)	212, 1407
PspPPI	RGGWCCY	1 cut(s)	1407
PstNI	CAGNNNCTG	1 cut(s)	832
PsuI	RGATCY	7 cut(s)	373, 1117, 1210, 1579, 1618, 1771, 1826
RsaI	GTAC	2 cut(s)	419, 818
RsaNI	GTAC	2 cut(s)	418, 817
RseI	CAYNNNNRTG	1 cut(s)	1445
SalI	GTCGAC	1 cut(s)	1638
SaqAI	TTAA	3 cut(s)	536, 1088, 1311
Sau3AI	GATC	9 cut(s)	373, 992, 1117, 1210, 1507, 1579, 1618, 1771, 1826
Sau96I	GGNCC	2 cut(s)	212, 1407
SchI	GAGTC	3 cut(s)	170, 296, 1706
ScrFI	CCNGG	6 cut(s)	367, 565, 566, 721, 890, 1393
SduI	GDGCHC	5 cut(s)	247, 276, 315, 351, 940
SfaNI	GCATC	8 cut(s)	673, 784, 939, 1208, 1228, 1466, 1534, 1732
SfcI	CTRYAG	1 cut(s)	1343
SfoI	GGCGCC	1 cut(s)	361
SinI	GGWCC	2 cut(s)	212, 1407
SmaI	CCCGGG	1 cut(s)	566
SmiMI	CAYNNNNRTG	1 cut(s)	1445
SmlI	CTYRAG	3 cut(s)	535, 597, 1463
SmoI	CTYRAG	3 cut(s)	535, 597, 1463
SpeI	ACTAGT	1 cut(s)	1319
SrfI	GCCCGGGC	1 cut(s)	566
Sse9I	AATT	9 cut(s)	86, 442, 674, 797, 1286, 1371, 1423, 1500, 1799
SseBI	AGGCCT	1 cut(s)	533
SsiI	CCGC	6 cut(s)	189, 222, 256, 363, 448, 686
SspDI	GGCGCC	1 cut(s)	359
SspMI	CTAG	7 cut(s)	921, 975, 1320, 1361, 1643, 1664, 1830
StuI	AGGCCT	1 cut(s)	533
StyD4I	CCNGG	6 cut(s)	365, 563, 564, 719, 888, 1391
StyI	CCWWGG	3 cut(s)	267, 1112, 1214
TaaI	ACNGT	2 cut(s)	694, 1185
TaiI	ACGT	2 cut(s)	208, 309
TaqI	TCGA	6 cut(s)	168, 303, 345, 1163, 1180, 1639
TasI	AATT	9 cut(s)	86, 442, 674, 797, 1286, 1371, 1423, 1500, 1799
TatI	WGTACW	2 cut(s)	417, 816
TauI	GCSGC	4 cut(s)	191, 224, 365, 689
TfiI	GAWTC	2 cut(s)	1596, 1646
Tru1I	TTAA	3 cut(s)	536, 1088, 1311
Tru9I	TTAA	3 cut(s)	536, 1088, 1311
TscAI	CASTG	4 cut(s)	629, 1233, 1534, 1812
TseFI	GTSAC	1 cut(s)	1438
TseI	GCWGC	9 cut(s)	4, 132, 585, 716, 971, 1331, 1338, 1388, 1522
Tsp45I	GTSAC	1 cut(s)	1438
TspDTI	ATGAA	3 cut(s)	1170, 1539, 1707
TspGWI	ACGGA	1 cut(s)	1478
TspMI	CCCGGG	1 cut(s)	564
TspRI	CASTG	4 cut(s)	629, 1233, 1534, 1812
Van91I	CCANNNNNTGG	1 cut(s)	832
Vha464I	CTTAAG	1 cut(s)	535
VpaK11BI	GGWCC	2 cut(s)	212, 1407
XapI	RAATTY	5 cut(s)	86, 797, 1423, 1500, 1799
XbaI	TCTAGA	2 cut(s)	1360, 1829
XceI	RCATGY	1 cut(s)	1034
XmaI	CCCGGG	1 cut(s)	564
XmiI	GTMKAC	1 cut(s)	1639
XspI	CTAG	7 cut(s)	921, 975, 1320, 1361, 1643, 1664, 1830
ZraI	GACGTC	1 cut(s)	307

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.