pycom13g16300

Belongs to the cyclin family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Forward (+)
12017888 .. 12023829
5942 bp
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UTR
Exon/CDS
Intron
pycom13g16300.8

Sequence Viewer

Length: 1443 bp
ATGTCAAGTTTAACTCTTTGTTTGTTGCTGACCTTGCTTATACGGTTTTACCCTCATCAAATTACAAATATAAAACGGTCTTCCCTTTCGGTTTGCTGTGAAACTTCGCATCCTTCTTCCGCTCTTTCCTCTCTTTCTCTGCTCCTTTACGCGTTCTTCCTCCCAAACCCTAACCATCTTGCGTACGATCGTATCCAACCACGGTTTCAGATCTCCATCGCTGCCGATTGGCCAATCGCGCTTATATTTCCCGATTGCGATTCTTCTCAACGTCGTCGTTTTTCAGCTGCAGGAATAATGGCTTTTATACGTAACTATCGCTCACAAGGGGGCACCGCTGGTGATGAGTGTTGGCCGTCTCTCGGTAGAAATGACGTCAAAAGCTTCAACAACTTCAACCACAACAACAACTGGAACAGGAGCAGGACTAATAACTTCGTTAAGAATTATAACAATTATCAGAAGTACAATTATAACAATTTCCAGAAGTACGTGGGTGGTTATAAGGAGCATGCGGATAATTCTAATTATATCAAGCCTGACAGTGCACCATCGTTTAAGAGGAGAAAATTTTCAGATTCTACTTGGGGTGATGGTGGGAGACATTATCTGCCACCCAACACATATGAGTTTATCTCTTCTTCTTGCAATAATTATGTCCCTCATCAAAGATCCAATGGTGATGCCTCTGCATCTACCACTGGTAAACGTGACCGCTCAAAGTTAGATGAGGATGAACTGCCCTTTATGTCAAGGGATGAGATAGAGAGATGCTCCCCATCTAGAAAAGATGGTATAGATTCAGTACGTGAAGCACACTTGCGCTACTCATACTGTTCTTACCTTCAGAATCTTGGATTGCGGCTTGACTTGCCCCAGACTACTATCGCTACTGCAATGGTTCTCTGTCATCGGTTTTTCGCCCGGCAGTCACATGCTTGCCATGATAGATTTTTGATTGCTACTGCCGCTCTGTTCCTAGCAGCAAAGTCCGAGGAGACACCACGCCCTTTGAATACTGTGTTGAGAACATCTTCTGAGATTCTCCATAAGCAGGATATCAGTTTCTTGTCCTATATGCTCCCTATTGACTGGTTTGAGCAGCATCGGGAACGGGTGACGGAGGCTGAGCAAATGATACTGACCACTCTAAATTTTGAACTTGGTGTGCAGCATCCGTATGCACCACTTACATCTACTCTTAACAAATTAGGTCTTTCACAAACAATTCTGGTGAATCTGTCCTTAAGCTTGGTCAGTGAAGGGCTTCGGAGTTCTCTGTGGCTGCAGTTCAAACCGCATCATATTGCGGCAGGAGCTGCCTACCTTGCCGCAAAGTTTCTGAATTTGGATCTTGATTCTTATAAAAATATATGGCAGGAATTCCAAGCTACACCGGATATTCTTCAAGCTGTTGCTCAGCAGTTGACGGAACTCTTCTAG

Protein Analysis

481

Amino Acids

54.88

Weight (kDa)

8.68

Isoelectric Point (pI)

59.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 450, 474, 504, 1365
AatII GACGTC 1 cut(s) 378
AccB1I GGYRCC 1 cut(s) 332
AccBSI CCGCTC 3 cut(s) 122, 717, 971
AccII CGCG 2 cut(s) 152, 239
AciI CCGC 9 cut(s) 120, 336, 515, 715, 862, 969, 1298, 1310, 1332
AclWI GGATC 2 cut(s) 666, 1359
AcoI YGGCCR 2 cut(s) 230, 353
AcsI RAATTY 4 cut(s) 569, 1153, 1345, 1382
AcuI CTGAAG 1 cut(s) 830
AcyI GRCGYC 1 cut(s) 375
AfaI GTAC 4 cut(s) 185, 467, 491, 807
AfiI CCNNNNNNNGG 2 cut(s) 362, 1054
AflII CTTAAG 1 cut(s) 1246
AflIII ACRYGT 1 cut(s) 150
AgsI TTSAA 6 cut(s) 388, 397, 1015, 1160, 1294, 1409
AjuI GAANNNNNNNTTGG 2 cut(s) 189, 221
AluBI AGCT 6 cut(s) 287, 384, 1251, 1319, 1391, 1412
AluI AGCT 6 cut(s) 287, 384, 1251, 1319, 1391, 1412
Alw21I GWGCWC 1 cut(s) 550
Alw26I GTCTC 3 cut(s) 363, 595, 992
Alw44I GTGCAC 1 cut(s) 546
AlwI GGATC 2 cut(s) 666, 1359
AlwNI CAGNNNCTG 1 cut(s) 1319
AoxI GGCC 2 cut(s) 230, 353
ApaLI GTGCAC 1 cut(s) 546
ApeKI GCWGC 7 cut(s) 221, 287, 983, 1102, 1171, 1285, 1319
ApoI RAATTY 4 cut(s) 569, 1153, 1345, 1382
Asp700I GAANNNNTTC 3 cut(s) 571, 1033, 1266
AspLEI GCGC 2 cut(s) 241, 825
AsuC2I CCSGG 1 cut(s) 925
AsuHPI GGTGA 5 cut(s) 353, 602, 692, 1129, 1246
BaeGI GKGCMC 2 cut(s) 335, 550
BaeI ACNNNNGTAYC 2 cut(s) 175, 208
BalI TGGCCA 1 cut(s) 232
BanI GGYRCC 1 cut(s) 332
BbsI GAAGAC 1 cut(s) 72
Bbv12I GWGCWC 1 cut(s) 550
BbvI GCAGC 7 cut(s) 208, 274, 995, 1114, 1183, 1272, 1306
BccI CCATC 6 cut(s) 183, 224, 559, 587, 785, 787
BceAI ACGGC 1 cut(s) 340
BciVI GTATCC 1 cut(s) 203
BcnI CCSGG 1 cut(s) 925
BcoDI GTCTC 3 cut(s) 363, 595, 992
BfaI CTAG 3 cut(s) 783, 980, 1441
BfmI CTRYAG 2 cut(s) 288, 1286
BfrI CTTAAG 1 cut(s) 1246
BfuI GTATCC 1 cut(s) 203
BglII AGATCT 1 cut(s) 210
BlpI GCTNAGC 2 cut(s) 1128, 1419
Bme1390I CCNGG 1 cut(s) 925
BmiI GGNNCC 1 cut(s) 334
BmrFI CCNGG 1 cut(s) 925
BmsI GCATC 7 cut(s) 118, 673, 701, 761, 1114, 1183, 1309
BpiI GAAGAC 1 cut(s) 72
BplI GAGNNNNNCTC 4 cut(s) 620, 652, 758, 790
Bpu1102I GCTNAGC 2 cut(s) 1128, 1419
BpuMI CCSGG 1 cut(s) 925
BsaAI YACGTR 3 cut(s) 311, 493, 809
BsaBI GATNNNNATC 1 cut(s) 215
BsaHI GRCGYC 1 cut(s) 375
BsaJI CCNNGG 2 cut(s) 200, 993
BsaWI WCCGGW 1 cut(s) 1396
Bsc4I CCNNNNNNNGG 2 cut(s) 362, 1054
Bse1I ACTGG 3 cut(s) 416, 706, 1097
Bse3DI GCAATG 1 cut(s) 903
Bse8I GATNNNNATC 1 cut(s) 215
BseDI CCNNGG 2 cut(s) 200, 993
BseGI GGATG 4 cut(s) 109, 739, 763, 1174
BseJI GATNNNNATC 1 cut(s) 215
BseLI CCNNNNNNNGG 2 cut(s) 362, 1054
BseMI GCAATG 1 cut(s) 903
BseMII CTCAG 3 cut(s) 1029, 1119, 1433
BseNI ACTGG 3 cut(s) 416, 706, 1097
BseRI GAGGAG 2 cut(s) 577, 1010
BseSI GKGCMC 2 cut(s) 335, 550
BseXI GCAGC 7 cut(s) 208, 274, 995, 1114, 1183, 1272, 1306
BsgI GTGCAG 1 cut(s) 1190
Bsh1236I CGCG 2 cut(s) 152, 239
Bsh1285I CGRYCG 1 cut(s) 190
BshFI GGCC 2 cut(s) 232, 355
BshNI GGYRCC 1 cut(s) 332
BsiEI CGRYCG 1 cut(s) 190
BsiHKAI GWGCWC 1 cut(s) 550
BsiSI CCGG 2 cut(s) 925, 1397
BsiWI CGTACG 1 cut(s) 183
BslFI GGGAC 1 cut(s) 644
BslI CCNNNNNNNGG 2 cut(s) 362, 1054
BsmAI GTCTC 3 cut(s) 363, 595, 992
BsmBI CGTCTC 1 cut(s) 363
BsmFI GGGAC 1 cut(s) 644
BsnI GGCC 2 cut(s) 232, 355
Bsp1286I GDGCHC 2 cut(s) 335, 550
Bsp143I GATC 4 cut(s) 187, 210, 671, 1351
Bsp1720I GCTNAGC 2 cut(s) 1128, 1419
BspACI CCGC 9 cut(s) 120, 336, 515, 715, 862, 969, 1298, 1310, 1332
BspANI GGCC 2 cut(s) 232, 355
BspCNI CTCAG 3 cut(s) 1030, 1120, 1432
BspFNI CGCG 2 cut(s) 152, 239
BspLI GGNNCC 1 cut(s) 334
BspMAI CTGCAG 2 cut(s) 292, 1290
BspPI GGATC 2 cut(s) 666, 1359
BspT107I GGYRCC 1 cut(s) 332
BspTI CTTAAG 1 cut(s) 1246
BsrBI CCGCTC 3 cut(s) 122, 717, 971
BsrDI GCAATG 1 cut(s) 903
BsrI ACTGG 3 cut(s) 416, 706, 1097
BssECI CCNNGG 2 cut(s) 200, 993
BssMI GATC 4 cut(s) 187, 210, 671, 1351
BssNI GRCGYC 1 cut(s) 375
Bst4CI ACNGT 6 cut(s) 45, 78, 204, 545, 836, 1021
Bst6I CTCTTC 1 cut(s) 643
BstACI GRCGYC 1 cut(s) 375
BstAFI CTTAAG 1 cut(s) 1246
BstAPI GCANNNNNTGC 1 cut(s) 1319
BstBAI YACGTR 3 cut(s) 311, 493, 809
BstC8I GCNNGC 2 cut(s) 513, 940
BstDEI CTNAG 3 cut(s) 1038, 1128, 1419
BstDSI CCRYGG 1 cut(s) 200
BstF5I GGATG 4 cut(s) 109, 739, 763, 1174
BstFNI CGCG 2 cut(s) 152, 239
BstHHI GCGC 2 cut(s) 241, 825
BstKTI GATC 4 cut(s) 190, 213, 674, 1354
BstMAI GTCTC 3 cut(s) 363, 595, 992
BstMBI GATC 4 cut(s) 187, 210, 671, 1351
BstMCI CGRYCG 1 cut(s) 190
BstMWI GCNNNNNNNGC 7 cut(s) 34, 238, 871, 968, 1316, 1319, 1328
BstNSI RCATGY 2 cut(s) 515, 938
BstSCI CCNGG 1 cut(s) 923
BstSFI CTRYAG 2 cut(s) 288, 1286
BstSLI GKGCMC 2 cut(s) 335, 550
BstSNI TACGTA 1 cut(s) 311
BstUI CGCG 2 cut(s) 152, 239
BstV1I GCAGC 7 cut(s) 208, 274, 995, 1114, 1183, 1272, 1306
BstV2I GAAGAC 1 cut(s) 72
BstX2I RGATCY 3 cut(s) 210, 671, 1351
BstYI RGATCY 3 cut(s) 210, 671, 1351
BsuI GTATCC 1 cut(s) 203
BsuRI GGCC 2 cut(s) 232, 355
BtgI CCRYGG 1 cut(s) 200
BtgZI GCGATG 1 cut(s) 202
BtsCI GGATG 4 cut(s) 109, 739, 763, 1174
BtsIMutI CAGTG 3 cut(s) 550, 699, 1264
Cac8I GCNNGC 2 cut(s) 513, 940
CaiI CAGNNNCTG 1 cut(s) 1319
CfoI GCGC 2 cut(s) 241, 825
Csp6I GTAC 4 cut(s) 184, 466, 490, 806
CspCI CAANNNNNGTGG 2 cut(s) 993, 1028
CviAII CATG 3 cut(s) 512, 935, 944
CviQI GTAC 4 cut(s) 184, 466, 490, 806
DdeI CTNAG 3 cut(s) 1038, 1128, 1419
DpnI GATC 4 cut(s) 189, 212, 673, 1353
DpnII GATC 4 cut(s) 187, 210, 671, 1351
EaeI YGGCCR 2 cut(s) 230, 353
Eam1104I CTCTTC 1 cut(s) 643
EarI CTCTTC 1 cut(s) 643
Eco105I TACGTA 1 cut(s) 311
Eco32I GATATC 1 cut(s) 1060
Eco57I CTGAAG 1 cut(s) 830
EcoRI GAATTC 1 cut(s) 1382
EcoRV GATATC 1 cut(s) 1060
Esp3I CGTCTC 1 cut(s) 363
FaeI CATG 3 cut(s) 515, 938, 947
FaqI GGGAC 1 cut(s) 644
FatI CATG 3 cut(s) 511, 934, 943
FauNDI CATATG 1 cut(s) 625
FokI GGATG 4 cut(s) 96, 746, 770, 1161
FspBI CTAG 3 cut(s) 783, 980, 1441
GlaI GCGC 2 cut(s) 240, 824
HaeIII GGCC 2 cut(s) 232, 355
HapII CCGG 2 cut(s) 925, 1397
HhaI GCGC 2 cut(s) 241, 825
Hin1I GRCGYC 1 cut(s) 375
Hin1II CATG 3 cut(s) 515, 938, 947
Hin6I GCGC 2 cut(s) 239, 823
HinP1I GCGC 2 cut(s) 239, 823
HincII GTYRAC 1 cut(s) 1428
HindII GTYRAC 1 cut(s) 1428
HindIII AAGCTT 2 cut(s) 382, 1249
HinfI GANTC 7 cut(s) 260, 578, 800, 850, 1042, 1237, 1358
HpaII CCGG 2 cut(s) 925, 1397
HphI GGTGA 5 cut(s) 353, 602, 692, 1129, 1246
Hpy166II GTNNAC 3 cut(s) 548, 707, 1428
Hpy188I TCNGA 8 cut(s) 210, 462, 577, 849, 994, 1039, 1272, 1344
Hpy188III TCNNGA 5 cut(s) 251, 484, 783, 1109, 1355
Hpy8I GTNNAC 3 cut(s) 548, 707, 1428
Hpy99I CGWCG 2 cut(s) 276, 279
HpyAV CCTTC 3 cut(s) 123, 854, 1256
HpyCH4III ACNGT 6 cut(s) 45, 78, 204, 545, 836, 1021
HpyCH4IV ACGT 6 cut(s) 271, 310, 375, 492, 709, 808
HpyCH4V TGCA 8 cut(s) 290, 548, 648, 692, 896, 1171, 1184, 1288
HpyF10VI GCNNNNNNNGC 7 cut(s) 34, 238, 871, 968, 1316, 1319, 1328
HpyF3I CTNAG 3 cut(s) 1038, 1128, 1419
HpySE526I ACGT 6 cut(s) 271, 310, 375, 492, 709, 808
Hsp92I GRCGYC 1 cut(s) 375
Hsp92II CATG 3 cut(s) 515, 938, 947
HspAI GCGC 2 cut(s) 239, 823
Kzo9I GATC 4 cut(s) 187, 210, 671, 1351
LmnI GCTCC 6 cut(s) 147, 420, 508, 779, 1086, 1316
Lsp1109I GCAGC 7 cut(s) 208, 274, 995, 1114, 1183, 1272, 1306
LweI GCATC 7 cut(s) 118, 673, 701, 761, 1114, 1183, 1309
MaeI CTAG 3 cut(s) 783, 980, 1441
MaeII ACGT 6 cut(s) 271, 310, 375, 492, 709, 808
MaeIII GTNAC 4 cut(s) 311, 710, 930, 1117
MalI GATC 4 cut(s) 189, 212, 673, 1353
MbiI CCGCTC 3 cut(s) 122, 717, 971
MboI GATC 4 cut(s) 187, 210, 671, 1351
MboII GAAGA 9 cut(s) 72, 108, 148, 255, 630, 633, 1026, 1397, 1429
MflI RGATCY 3 cut(s) 210, 671, 1351
MhlI GDGCHC 2 cut(s) 335, 550
MlsI TGGCCA 1 cut(s) 232
MluI ACGCGT 1 cut(s) 150
MluNI TGGCCA 1 cut(s) 232
MmeI TCCRAC 1 cut(s) 220
MnlI CCTC 9 cut(s) 63, 139, 170, 555, 672, 697, 724, 988, 1117
Mox20I TGGCCA 1 cut(s) 232
MroXI GAANNNNTTC 3 cut(s) 571, 1033, 1266
MscI TGGCCA 1 cut(s) 232
MseI TTAA 5 cut(s) 11, 441, 558, 1203, 1247
MslI CAYNNNNRTG 1 cut(s) 1179
Msp20I TGGCCA 1 cut(s) 232
MspA1I CMGCKG 2 cut(s) 287, 338
MspCI CTTAAG 1 cut(s) 1246
MspI CCGG 2 cut(s) 925, 1397
MspR9I CCNGG 1 cut(s) 925
MvnI CGCG 2 cut(s) 152, 239
MwoI GCNNNNNNNGC 7 cut(s) 34, 238, 871, 968, 1316, 1319, 1328
NciI CCSGG 1 cut(s) 925
NdeI CATATG 1 cut(s) 625
NdeII GATC 4 cut(s) 187, 210, 671, 1351
NlaIII CATG 3 cut(s) 515, 938, 947
NlaIV GGNNCC 1 cut(s) 334
NmuCI GTSAC 3 cut(s) 710, 930, 1117
NspI RCATGY 2 cut(s) 515, 938
PaeI GCATGC 1 cut(s) 515
PdmI GAANNNNTTC 3 cut(s) 571, 1033, 1266
PfeI GAWTC 7 cut(s) 260, 578, 800, 850, 1042, 1237, 1358
Pfl23II CGTACG 1 cut(s) 183
Ple19I CGATCG 1 cut(s) 190
Ppu21I YACGTR 3 cut(s) 311, 493, 809
PsiI TTATAA 4 cut(s) 450, 474, 504, 1365
PspLI CGTACG 1 cut(s) 183
PspN4I GGNNCC 1 cut(s) 334
PstI CTGCAG 2 cut(s) 292, 1290
PstNI CAGNNNCTG 1 cut(s) 1319
PsuI RGATCY 3 cut(s) 210, 671, 1351
PvuI CGATCG 1 cut(s) 190
PvuII CAGCTG 1 cut(s) 287
RsaI GTAC 4 cut(s) 185, 467, 491, 807
RsaNI GTAC 4 cut(s) 184, 466, 490, 806
RseI CAYNNNNRTG 1 cut(s) 1179
SaqAI TTAA 5 cut(s) 11, 441, 558, 1203, 1247
Sau3AI GATC 4 cut(s) 187, 210, 671, 1351
ScrFI CCNGG 1 cut(s) 925
SduI GDGCHC 2 cut(s) 335, 550
SfaNI GCATC 7 cut(s) 118, 673, 701, 761, 1114, 1183, 1309
SfcI CTRYAG 2 cut(s) 288, 1286
SmiMI CAYNNNNRTG 1 cut(s) 1179
SmlI CTYRAG 1 cut(s) 1246
SmoI CTYRAG 1 cut(s) 1246
SnaBI TACGTA 1 cut(s) 311
SphI GCATGC 1 cut(s) 515
SsiI CCGC 9 cut(s) 120, 336, 515, 715, 862, 969, 1298, 1310, 1332
SspMI CTAG 3 cut(s) 783, 980, 1441
StyD4I CCNGG 1 cut(s) 923
TaaI ACNGT 6 cut(s) 45, 78, 204, 545, 836, 1021
TaiI ACGT 6 cut(s) 274, 313, 378, 495, 712, 811
TatI WGTACW 1 cut(s) 465
TauI GCSGC 4 cut(s) 865, 971, 1313, 1334
TfiI GAWTC 7 cut(s) 260, 578, 800, 850, 1042, 1237, 1358
Tru1I TTAA 5 cut(s) 11, 441, 558, 1203, 1247
Tru9I TTAA 5 cut(s) 11, 441, 558, 1203, 1247
TscAI CASTG 3 cut(s) 550, 706, 1264
TseFI GTSAC 3 cut(s) 710, 930, 1117
TseI GCWGC 7 cut(s) 221, 287, 983, 1102, 1171, 1285, 1319
Tsp45I GTSAC 3 cut(s) 710, 930, 1117
TspDTI ATGAA 1 cut(s) 750
TspGWI ACGGA 2 cut(s) 1136, 1167
TspRI CASTG 3 cut(s) 550, 706, 1264
Vha464I CTTAAG 1 cut(s) 1246
VneI GTGCAC 1 cut(s) 546
XapI RAATTY 4 cut(s) 569, 1153, 1345, 1382
XbaI TCTAGA 1 cut(s) 782
XceI RCATGY 2 cut(s) 515, 938
XmnI GAANNNNTTC 3 cut(s) 571, 1033, 1266
XspI CTAG 3 cut(s) 783, 980, 1441
ZraI GACGTC 1 cut(s) 376
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.