pycom16g15920

Belongs to the cyclin family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
Physical Location & Seq
Forward (+)
11830858 .. 11836791
5934 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom16g15920.6

Sequence Viewer

Length: 1296 bp
ATGCTCCTTACGCTTTCTTCCTCCCAAACCCTAATCACTTCGCGTACGATCGCATCCAACCGTGTGATCAGATCGCCATCGCTGCCGATCAGGTCATCGCTCTTATATTTCACGATTGCGATTGTTCTCGACGTCGTCGTTTTGTATTTTCGAGTATGTCTTTTGCACGTAACTATCGCTCACATGTGGGCACCACTGGTGAAGAGTATTGGCCCACCTTTGGTAGAAATGACTTCAAAAACTTCCACAACTTCAACCACCGGAACAACAACAACTGGAACAGGAGCAGGACCAGTAGCTTTGCTAAGAATTATAACAATTTCCCCAATTTCCAGAATTACGTGGGTGGTTATAAGGAGTACGCTGATAATTCTAATTATTTCAATCCTGACAGTGCACCATCGTTTAAGAGGAGAAAATTTTCAGATTCTACTTGGGGTGATGGTGGGAGACATTATCTGCCACCCAACACATATGAATGAGTTTGTCTCGTCTGCCTGCAATAATTATCTTCCTTATGCAAGATCCAACGGTGATGCCTCTGCATCTACTACTGGTAAACGTGACCGCTCAAAATTAGATGAGGATGAACTGCCCTTTATGTCAAGGGATGAGATAGAGAGATGCTCCCCGTCTAGAAAAGATGGTATAGATTCAGTGCGTGAAGCGCACTTGCGCTACTCATATTGTTCTTACCTTCAGAATCTTGGATTGCGGCTTGACTTGCCCCAGACTACTATCGCTACAGCAATGGTTCTCTGCCATCGGTTTTTCGCCCGGCGATCACACGCTTGCCATGATAGATTTTTGATTGCTACTGCCACTCTTTTCCTAGCTGCAAAGTCCGAGGAGACACCACGCCCTTTGAATACTGTGTTGAGAATGTCTTCTGAGATTTTCCATAAGCAGGATATCAGTTTCTTGTCCTATATGCTCCCCATTGACTGGTTTGAGCAGTATCGGGAACGGGTGACTGAGGCTGAGCAAATGATACTGACCACTCTAAATTTTGAACTTGGTGTGCAGCATCCATATGCACCACTTACGTCTATTCTTAACAAATTAGGTCTCTCACAAACTGTTCTGGTGAATCTGTCCTTAAGCTTGGTCAGTGAAGGGCTTCGGAGTTCTCTGTGGCTCCAGTTCAAACCGCATCATATTGCGGCAGGAGCTACCTACCTTGCCGCAAAGTTTCTAAATTTGGATCTTGATTCTTATAAAAATATATGGCAGGAATTCCAAGCTACACCAGATATTCTTCAAGCCGTTGCTCAGCAGTTGATGGAACTCTTCTAG

Protein Analysis

432

Amino Acids

48.38

Weight (kDa)

8.63

Isoelectric Point (pI)

54.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 314, 353, 1218
AatII GACGTC 1 cut(s) 135
AccB1I GGYRCC 1 cut(s) 190
AccB7I CCANNNNNTGG 1 cut(s) 945
AccBSI CCGCTC 1 cut(s) 570
AccII CGCG 1 cut(s) 43
AciI CCGC 5 cut(s) 568, 715, 1151, 1163, 1185
AclWI GGATC 2 cut(s) 519, 1212
AcsI RAATTY 4 cut(s) 418, 1006, 1198, 1235
AcuI CTGAAG 1 cut(s) 683
AcyI GRCGYC 1 cut(s) 132
AfaI GTAC 2 cut(s) 46, 361
AfiI CCNNNNNNNGG 3 cut(s) 220, 907, 945
AflII CTTAAG 1 cut(s) 1099
AflIII ACRYGT 1 cut(s) 183
AgsI TTSAA 7 cut(s) 237, 255, 384, 868, 1013, 1147, 1262
AluBI AGCT 5 cut(s) 299, 836, 1104, 1172, 1244
AluI AGCT 5 cut(s) 299, 836, 1104, 1172, 1244
Alw21I GWGCWC 1 cut(s) 399
Alw26I GTCTC 4 cut(s) 444, 493, 845, 1073
Alw44I GTGCAC 1 cut(s) 395
AlwI GGATC 2 cut(s) 519, 1212
AoxI GGCC 1 cut(s) 211
ApaLI GTGCAC 1 cut(s) 395
ApeKI GCWGC 3 cut(s) 82, 836, 1024
ApoI RAATTY 4 cut(s) 418, 1006, 1198, 1235
Asp700I GAANNNNTTC 3 cut(s) 420, 886, 1119
AspLEI GCGC 2 cut(s) 670, 678
AspS9I GGNCC 2 cut(s) 212, 290
AsuC2I CCSGG 1 cut(s) 778
AsuHPI GGTGA 5 cut(s) 211, 451, 545, 982, 1099
AvaII GGWCC 1 cut(s) 290
BaeGI GKGCMC 2 cut(s) 193, 399
BanI GGYRCC 1 cut(s) 190
BbsI GAAGAC 1 cut(s) 879
Bbv12I GWGCWC 1 cut(s) 399
BbvI GCAGC 3 cut(s) 69, 823, 1036
BccI CCATC 6 cut(s) 85, 408, 436, 638, 771, 1276
BceAI ACGGC 1 cut(s) 1250
BclI TGATCA 1 cut(s) 66
BcnI CCSGG 1 cut(s) 778
BcoDI GTCTC 4 cut(s) 444, 493, 845, 1073
BfaI CTAG 3 cut(s) 636, 833, 1294
BfmI CTRYAG 1 cut(s) 744
BfrI CTTAAG 1 cut(s) 1099
BisI GCNGC 6 cut(s) 83, 716, 837, 1025, 1164, 1185
BlpI GCTNAGC 2 cut(s) 981, 1272
BlsI GCNGC 6 cut(s) 84, 717, 838, 1026, 1165, 1186
Bme1390I CCNGG 1 cut(s) 778
Bme18I GGWCC 1 cut(s) 290
BmgT120I GGNCC 2 cut(s) 212, 290
BmiI GGNNCC 2 cut(s) 192, 1139
BmrFI CCNGG 1 cut(s) 778
BmsI GCATC 6 cut(s) 62, 526, 554, 614, 1036, 1162
BpiI GAAGAC 1 cut(s) 879
BplI GAGNNNNNCTC 4 cut(s) 473, 505, 611, 643
BpmI CTGGAG 1 cut(s) 1124
Bpu1102I GCTNAGC 2 cut(s) 981, 1272
BpuMI CCSGG 1 cut(s) 778
BsaAI YACGTR 2 cut(s) 169, 342
BsaBI GATNNNNATC 1 cut(s) 76
BsaHI GRCGYC 1 cut(s) 132
BsaI GGTCTC 1 cut(s) 1073
BsaJI CCNNGG 1 cut(s) 846
BsaWI WCCGGW 1 cut(s) 260
Bsc4I CCNNNNNNNGG 3 cut(s) 220, 907, 945
Bse1I ACTGG 6 cut(s) 201, 280, 293, 559, 950, 1141
Bse3DI GCAATG 1 cut(s) 756
Bse8I GATNNNNATC 1 cut(s) 76
BseDI CCNNGG 1 cut(s) 846
BseGI GGATG 4 cut(s) 53, 592, 616, 1027
BseJI GATNNNNATC 1 cut(s) 76
BseLI CCNNNNNNNGG 3 cut(s) 220, 907, 945
BseMI GCAATG 1 cut(s) 756
BseMII CTCAG 4 cut(s) 882, 966, 972, 1286
BseNI ACTGG 6 cut(s) 201, 280, 293, 559, 950, 1141
BseRI GAGGAG 2 cut(s) 426, 863
BseSI GKGCMC 2 cut(s) 193, 399
BseXI GCAGC 3 cut(s) 69, 823, 1036
BsgI GTGCAG 1 cut(s) 1043
Bsh1236I CGCG 1 cut(s) 43
Bsh1285I CGRYCG 1 cut(s) 51
BshFI GGCC 1 cut(s) 213
BshNI GGYRCC 1 cut(s) 190
BsiEI CGRYCG 1 cut(s) 51
BsiHKAI GWGCWC 1 cut(s) 399
BsiSI CCGG 2 cut(s) 261, 778
BsiWI CGTACG 1 cut(s) 44
BslI CCNNNNNNNGG 3 cut(s) 220, 907, 945
BsmAI GTCTC 4 cut(s) 444, 493, 845, 1073
BsnI GGCC 1 cut(s) 213
Bso31I GGTCTC 1 cut(s) 1073
Bsp1286I GDGCHC 2 cut(s) 193, 399
Bsp143I GATC 7 cut(s) 48, 66, 71, 87, 524, 782, 1204
Bsp1720I GCTNAGC 2 cut(s) 981, 1272
BspACI CCGC 5 cut(s) 568, 715, 1151, 1163, 1185
BspANI GGCC 1 cut(s) 213
BspCNI CTCAG 4 cut(s) 883, 967, 973, 1285
BspFNI CGCG 1 cut(s) 43
BspLI GGNNCC 2 cut(s) 192, 1139
BspPI GGATC 2 cut(s) 519, 1212
BspT107I GGYRCC 1 cut(s) 190
BspTI CTTAAG 1 cut(s) 1099
BspTNI GGTCTC 1 cut(s) 1073
BsrBI CCGCTC 1 cut(s) 570
BsrDI GCAATG 1 cut(s) 756
BsrI ACTGG 6 cut(s) 201, 280, 293, 559, 950, 1141
BssECI CCNNGG 1 cut(s) 846
BssMI GATC 7 cut(s) 48, 66, 71, 87, 524, 782, 1204
BssNI GRCGYC 1 cut(s) 132
Bst4CI ACNGT 5 cut(s) 62, 394, 533, 874, 1081
Bst6I CTCTTC 1 cut(s) 197
BstACI GRCGYC 1 cut(s) 132
BstAFI CTTAAG 1 cut(s) 1099
BstBAI YACGTR 2 cut(s) 169, 342
BstC8I GCNNGC 2 cut(s) 499, 793
BstDEI CTNAG 5 cut(s) 305, 891, 975, 981, 1272
BstF5I GGATG 4 cut(s) 53, 592, 616, 1027
BstFNI CGCG 1 cut(s) 43
BstHHI GCGC 2 cut(s) 670, 678
BstKTI GATC 7 cut(s) 51, 69, 74, 90, 527, 785, 1207
BstMAI GTCTC 4 cut(s) 444, 493, 845, 1073
BstMBI GATC 7 cut(s) 48, 66, 71, 87, 524, 782, 1204
BstMCI CGRYCG 1 cut(s) 51
BstMWI GCNNNNNNNGC 5 cut(s) 10, 82, 667, 724, 1169
BstNSI RCATGY 1 cut(s) 187
BstSCI CCNGG 1 cut(s) 776
BstSFI CTRYAG 1 cut(s) 744
BstSLI GKGCMC 2 cut(s) 193, 399
BstUI CGCG 1 cut(s) 43
BstV1I GCAGC 3 cut(s) 69, 823, 1036
BstV2I GAAGAC 1 cut(s) 879
BstX2I RGATCY 2 cut(s) 524, 1204
BstYI RGATCY 2 cut(s) 524, 1204
BsuRI GGCC 1 cut(s) 213
BtgZI GCGATG 2 cut(s) 63, 81
BtsCI GGATG 4 cut(s) 53, 592, 616, 1027
BtsIMutI CAGTG 4 cut(s) 194, 399, 663, 1117
Cac8I GCNNGC 2 cut(s) 499, 793
CfoI GCGC 2 cut(s) 670, 678
Cfr13I GGNCC 2 cut(s) 212, 290
Csp6I GTAC 2 cut(s) 45, 360
CspCI CAANNNNNGTGG 2 cut(s) 846, 881
CviAII CATG 2 cut(s) 184, 797
CviQI GTAC 2 cut(s) 45, 360
DdeI CTNAG 5 cut(s) 305, 891, 975, 981, 1272
DpnI GATC 7 cut(s) 50, 68, 73, 89, 526, 784, 1206
DpnII GATC 7 cut(s) 48, 66, 71, 87, 524, 782, 1204
Eam1104I CTCTTC 1 cut(s) 197
EarI CTCTTC 1 cut(s) 197
Eco31I GGTCTC 1 cut(s) 1073
Eco32I GATATC 1 cut(s) 913
Eco47I GGWCC 1 cut(s) 290
Eco57I CTGAAG 1 cut(s) 683
EcoRI GAATTC 1 cut(s) 1235
EcoRV GATATC 1 cut(s) 913
FaeI CATG 2 cut(s) 187, 800
FatI CATG 2 cut(s) 183, 796
FauNDI CATATG 2 cut(s) 474, 1033
FbaI TGATCA 1 cut(s) 66
Fnu4HI GCNGC 6 cut(s) 83, 716, 837, 1025, 1164, 1185
FokI GGATG 4 cut(s) 40, 599, 623, 1014
Fsp4HI GCNGC 6 cut(s) 83, 716, 837, 1025, 1164, 1185
FspBI CTAG 3 cut(s) 636, 833, 1294
GlaI GCGC 2 cut(s) 669, 677
GluI GCNGC 6 cut(s) 83, 716, 837, 1025, 1164, 1185
GsuI CTGGAG 1 cut(s) 1124
HaeIII GGCC 1 cut(s) 213
HapII CCGG 2 cut(s) 261, 778
HhaI GCGC 2 cut(s) 670, 678
Hin1I GRCGYC 1 cut(s) 132
Hin1II CATG 2 cut(s) 187, 800
Hin6I GCGC 2 cut(s) 668, 676
HinP1I GCGC 2 cut(s) 668, 676
HindIII AAGCTT 1 cut(s) 1102
HinfI GANTC 5 cut(s) 427, 653, 703, 1090, 1211
HpaII CCGG 2 cut(s) 261, 778
HphI GGTGA 5 cut(s) 211, 451, 545, 982, 1099
Hpy166II GTNNAC 2 cut(s) 397, 560
Hpy188I TCNGA 6 cut(s) 71, 426, 702, 847, 892, 1125
Hpy188III TCNNGA 7 cut(s) 112, 128, 333, 388, 636, 962, 1208
Hpy8I GTNNAC 2 cut(s) 397, 560
Hpy99I CGWCG 3 cut(s) 134, 137, 140
HpyAV CCTTC 2 cut(s) 707, 1109
HpyCH4III ACNGT 5 cut(s) 62, 394, 533, 874, 1081
HpyCH4IV ACGT 5 cut(s) 132, 168, 341, 562, 1046
HpyCH4V TGCA 8 cut(s) 166, 397, 501, 521, 545, 839, 1024, 1037
HpyF10VI GCNNNNNNNGC 5 cut(s) 10, 82, 667, 724, 1169
HpyF3I CTNAG 5 cut(s) 305, 891, 975, 981, 1272
HpySE526I ACGT 5 cut(s) 132, 168, 341, 562, 1046
Hsp92I GRCGYC 1 cut(s) 132
Hsp92II CATG 2 cut(s) 187, 800
HspAI GCGC 2 cut(s) 668, 676
Ksp22I TGATCA 1 cut(s) 66
Kzo9I GATC 7 cut(s) 48, 66, 71, 87, 524, 782, 1204
LmnI GCTCC 6 cut(s) 9, 284, 632, 939, 1143, 1169
Lsp1109I GCAGC 3 cut(s) 69, 823, 1036
LweI GCATC 6 cut(s) 62, 526, 554, 614, 1036, 1162
MaeI CTAG 3 cut(s) 636, 833, 1294
MaeII ACGT 5 cut(s) 132, 168, 341, 562, 1046
MaeIII GTNAC 3 cut(s) 169, 563, 970
MalI GATC 7 cut(s) 50, 68, 73, 89, 526, 784, 1206
MbiI CCGCTC 1 cut(s) 570
MboI GATC 7 cut(s) 48, 66, 71, 87, 524, 782, 1204
MboII GAAGA 6 cut(s) 9, 214, 503, 879, 1250, 1282
MflI RGATCY 2 cut(s) 524, 1204
MhlI GDGCHC 2 cut(s) 193, 399
MmeI TCCRAC 2 cut(s) 81, 552
MnlI CCTC 6 cut(s) 31, 404, 550, 577, 841, 970
MroXI GAANNNNTTC 3 cut(s) 420, 886, 1119
MseI TTAA 3 cut(s) 407, 1056, 1100
MslI CAYNNNNRTG 2 cut(s) 477, 1032
MspCI CTTAAG 1 cut(s) 1099
MspI CCGG 2 cut(s) 261, 778
MspR9I CCNGG 1 cut(s) 778
MvnI CGCG 1 cut(s) 43
MwoI GCNNNNNNNGC 5 cut(s) 10, 82, 667, 724, 1169
NciI CCSGG 1 cut(s) 778
NdeI CATATG 2 cut(s) 474, 1033
NdeII GATC 7 cut(s) 48, 66, 71, 87, 524, 782, 1204
NlaIII CATG 2 cut(s) 187, 800
NlaIV GGNNCC 2 cut(s) 192, 1139
NmuCI GTSAC 2 cut(s) 563, 970
NspI RCATGY 1 cut(s) 187
PciI ACATGT 1 cut(s) 183
PcsI WCGNNNNNNNCGW 1 cut(s) 135
PdmI GAANNNNTTC 3 cut(s) 420, 886, 1119
PfeI GAWTC 5 cut(s) 427, 653, 703, 1090, 1211
Pfl23II CGTACG 1 cut(s) 44
PflFI GACNNNGTC 1 cut(s) 134
PflMI CCANNNNNTGG 1 cut(s) 945
PkrI GCNGC 6 cut(s) 84, 717, 838, 1026, 1165, 1186
Ple19I CGATCG 1 cut(s) 51
Ppu21I YACGTR 2 cut(s) 169, 342
PscI ACATGT 1 cut(s) 183
PsiI TTATAA 3 cut(s) 314, 353, 1218
PspLI CGTACG 1 cut(s) 44
PspN4I GGNNCC 2 cut(s) 192, 1139
PspPI GGNCC 2 cut(s) 212, 290
PsuI RGATCY 2 cut(s) 524, 1204
PsyI GACNNNGTC 1 cut(s) 134
PvuI CGATCG 1 cut(s) 51
RsaI GTAC 2 cut(s) 46, 361
RsaNI GTAC 2 cut(s) 45, 360
RseI CAYNNNNRTG 2 cut(s) 477, 1032
SaqAI TTAA 3 cut(s) 407, 1056, 1100
SatI GCNGC 6 cut(s) 83, 716, 837, 1025, 1164, 1185
Sau3AI GATC 7 cut(s) 48, 66, 71, 87, 524, 782, 1204
Sau96I GGNCC 2 cut(s) 212, 290
ScrFI CCNGG 1 cut(s) 778
SduI GDGCHC 2 cut(s) 193, 399
SfaNI GCATC 6 cut(s) 62, 526, 554, 614, 1036, 1162
SfcI CTRYAG 1 cut(s) 744
SinI GGWCC 1 cut(s) 290
SmiMI CAYNNNNRTG 2 cut(s) 477, 1032
SmlI CTYRAG 1 cut(s) 1099
SmoI CTYRAG 1 cut(s) 1099
SsiI CCGC 5 cut(s) 568, 715, 1151, 1163, 1185
SspMI CTAG 3 cut(s) 636, 833, 1294
StyD4I CCNGG 1 cut(s) 776
TaaI ACNGT 5 cut(s) 62, 394, 533, 874, 1081
TaiI ACGT 5 cut(s) 135, 171, 344, 565, 1049
TaqI TCGA 2 cut(s) 129, 151
TauI GCSGC 3 cut(s) 718, 1166, 1187
TfiI GAWTC 5 cut(s) 427, 653, 703, 1090, 1211
Tru1I TTAA 3 cut(s) 407, 1056, 1100
Tru9I TTAA 3 cut(s) 407, 1056, 1100
TscAI CASTG 4 cut(s) 201, 399, 663, 1117
TseFI GTSAC 2 cut(s) 563, 970
TseI GCWGC 3 cut(s) 82, 836, 1024
Tsp45I GTSAC 2 cut(s) 563, 970
TspDTI ATGAA 2 cut(s) 491, 603
TspRI CASTG 4 cut(s) 201, 399, 663, 1117
Tth111I GACNNNGTC 1 cut(s) 134
Van91I CCANNNNNTGG 1 cut(s) 945
Vha464I CTTAAG 1 cut(s) 1099
VneI GTGCAC 1 cut(s) 395
VpaK11BI GGWCC 1 cut(s) 290
XapI RAATTY 4 cut(s) 418, 1006, 1198, 1235
XbaI TCTAGA 1 cut(s) 635
XceI RCATGY 1 cut(s) 187
XmnI GAANNNNTTC 3 cut(s) 420, 886, 1119
XspI CTAG 3 cut(s) 636, 833, 1294
ZraI GACGTC 1 cut(s) 133
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.