Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0001793

Physical Location & Seq

Genomic Coordinates Reverse (-)

18364064 .. 18367108

Gene Structure 3045 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2316 bp

ATGATTAGTGTGAAGACTACATCATTGGCTGAAGATTGTGCGGTCGCCAAAATGGCAAAACTTGTCGAAGAGGCTCAAAACAGCAAAACCAGAACTCAAAGATTCATTGACAAATGTGCAATGTTCTATACCCCAGCGGTCCTAGTCATATCTGTTTCTATCGCGGTGATTCCAGCTGCATTACATGTTCACAATTGGAGCAAGTGGTTTCACTTAGCTTTGGTTGTTTTGGTGAGCGCATGTCCATGCAGTCTCATCCTCTCTACACCCATTGTGACTTTCTGCACGCTCACAAAAGCGGCAACATCTGGACTTCTGATCAAAGGAGGTGACTACATTGAGATTCTTGCTAAAGTCAAGATCATGGCTTTTGACAAAACTGGTACAATAACAAGGGGTGAATTTGTGGTGATGGATTTTCAATCTCTCCGTGATGACATTAGCTTGAACACATTGCTTTACTGGGTTTCAAGCATTGAGAGGAAGTCAAGTCATCCAATGGCAGATGCGCTGGTTGACTATGGAAGATCGCTTTCGGTTGAGCCAAAACCTGAAAATGTGGAGGAGTTTCAAAATTTTCCCGGGGAAGGTATTCATGGGAAAATTGATGGACAAGATATCTACATTGGAAACAGAAAAATTGCTTTGAGAGCTGCTTGTGAAATAATTCCAACAATTGAAGGTTCTAAAGGTGGGAAGACGATTGGTTACATATACTCTGGGGGAACCCCCGCTGGAGTCTTTACAATATCTGATGCTTGTCGATCTGGGGCTGCAGAGGCTGTCAAGGAGCTAAAGAAGTTAGGCATTAAAACAGCTCTGCTCACAGGAGACAGTAATGCTGCCGCATTACATACAAATGAGCAGCTTAAGCAAGCTCTCGAGGTAGTCCATGCGGAACTTCTACCTGAAGACAAGGCAAGAATCATTAAAGAATTTAAAATGGAAGGAAATACAGCAATGATTGGAGACGGTATCAATGATGCCCCTGCTTTAGCCACAGCCGATATTGGTATCTCAATGGGCATTTCAGGATCAGCCCTTGCTCAAGAAACTGGGAATATAATTTTACTGTCAAATGACGTTAGGAAACTACCGAAAGCAGTCCAACTTGCGAGAAGAGCTAATAGAAAAGTGATTGAGAATGTGGTTTTGTCAATCACTACTAAGGTCAGTATCCTTGCACTGGGATTTGCAGGGCATCCACTCGTTTGGGCTGCAGTTCTTGCTGATGTCGGGACATGCATGCTTGTGATATTCAACAGCATGCTACTCTTACGAGGAACCCACAAGCATGGAGGGAAAACTTCTGCACCACATGGCCATAAACATGGAAGCCATGGACATAGCCATTCTCACAAAAACCAACATTGTTGCTCGGACAGCAAACCCTTAAAAGCAGCCTGTAAACTTCAAAAATGTTCCTCGCAGAAATGTGGATCAGAGTGCCAGCCTAGTCCCTTAAATTCAAGCTTTCCCTGTAAACTTAAGTGCAGTGACTTACATGAGGCACAGCACTGTGATGAAACAAGCTGCACCAAAGTCAATCATGATCTCGAGTCACAGAATAAACACAATCATGGTTGTTTGAGTCATCATAATTTGAGCTCATGCGCAGAAGGTGATAAACTTTACGAGGCAAAACACTGCAATCATTCTGCTTCTTCTTTGGTGGAAATTAAGAAGTTGACAAGTCAAGGTCATTGCCACTCGACCCACTGCGGCAAAGAGCACAACAGAAAAGAAGATGATGGAGTCCATGAGGAAAAACACTGCAATTATTCCGCTTTTGCTTTGCCCAAAAGCGAAAAATTGACAAGTGGTGTTCATTGGCACTCAAGCCACAGTGGAAAGGAGCATAGTATAATGGAAGGTGATGCAATCCATGAGCCAAAACACTGCAACCATTCTACTTTTTCCTCGGAGGAAAGCAGAAAGTTGACAAGTACTGGTCATTGCCACTCAACTCATTGTGGCAATGATTATATTCACAATGAATCGTTAGGAGAAACGTTTGCCACAAGATGTGATCATCAGAACCACCATAATCAAGATAAACAATCACCCCCTCATACGACGATTGACATTGTAGCGGGTTGCGACCACACAGAATCAGCCGCAACGAATTCTTGCATTCGCTCCCGGACAGCGGAAAAGGAAGCATGTTGCTCGGAATTAGTAGCAATTCATGCTTGTGTGTTGGAGAAAAGAGAAGTCGGTGGGTGTTGCAAAAGCTACATGAAGGAATGCTGTGGTGGTCATGTGCATCTTGGTTCTAGCTTTCAAGGTTGTTTATCAGAAATCACAATTGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000041 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006829 GO:0006950 GO:0008150 GO:0009506 GO:0009636 GO:0010035 GO:0010038 GO:0010043 GO:0015691 GO:0016020 GO:0030001 GO:0030054 GO:0031090 GO:0032025 GO:0042221 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0048878 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0055044 GO:0055065 GO:0055069 GO:0055076 GO:0055080 GO:0061687 GO:0065007 GO:0065008 GO:0070838 GO:0071585 GO:0071944 GO:0072507 GO:0072511 GO:0097501 GO:0098588 GO:0098754 GO:0098771 GO:0098805 GO:1990170

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

E1-E2_ATPase HMA Hydrolase

Protein Analysis

772

Amino Acids

83.47

Weight (kDa)

7.07

Isoelectric Point (pI)

41.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Hydrolase	PF00702	119 - 336	3.1e-27	haloacid dehalogenase-like hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001793)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19110 AT2G19110 AT2G19110 AT4G30110 AT4G30110 AT4G30120 AT4G30120
fragaria_vesca	FvH4_4g07520 FvH4_4g07520 FvH4_4g07520 FvH4_4g07520 FvH4_6g33520 FvH4_6g33520 FvH4_6g33520 FvH4_6g33520
malus_domestica	MD00G1104400.v1.1 MD01G1183400.v1.1 MD01G1183700.v1.1 MD01G1184000.v1.1 MD01G1184300.v1.1 MD13G1244500.v1.1 MD16G1252700.v1.1
prunus_persica	Prupe.1G078700_v2.0.a1 Prupe.1G078700_v2.0.a1 Prupe.1G078700_v2.0.a1
pyrus_communis	pycom13g21550 pycom16g21330
rosa_chinensis	RchiOBHm_Chr2g0143431 RchiOBHm_Chr4g0400101
rosa_laevigata	RLG00000009214 RLG00000020035
rosa_multiflora	Rmu_sc0000037.1_g000006
rosa_roxburghii	Rroxscaffold_2G00101850 Rroxscaffold_5G00345040 Rroxscaffold_5G00345070
rosa_rugosa	Rorug02G0381400 Rorug04G0022600 Rorug04G0022600
rosa_samantha	Rh2AG434400 Rh2BG442200 Rh2CG420300 Rh2DG452400 Rh4BG096400 Rh4CG107500 Rh4DG093000
rosa_wichuraiana	Rw2G035400 Rw4G008180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1615
AccII	CGCG	1 cut(s)	164
AclI	AACGTT	1 cut(s)	2012
AclWI	GGATC	2 cut(s)	1042, 1447
AcoI	YGGCCR	1 cut(s)	1321
AcsI	RAATTY	5 cut(s)	401, 574, 935, 1465, 2125
AcuI	CTGAAG	2 cut(s)	51, 930
AfaI	GTAC	2 cut(s)	385, 1948
AfiI	CCNNNNNNNGG	3 cut(s)	587, 1186, 2149
AflII	CTTAAG	2 cut(s)	869, 1487
AflIII	ACRYGT	1 cut(s)	184
Alw21I	GWGCWC	2 cut(s)	1610, 1734
Alw26I	GTCTC	3 cut(s)	257, 825, 963
AlwI	GGATC	2 cut(s)	1042, 1447
AlwNI	CAGNNNCTG	1 cut(s)	782
Ama87I	CYCGRG	3 cut(s)	581, 881, 1556
AoxI	GGCC	1 cut(s)	1321
ApeKI	GCWGC	8 cut(s)	176, 653, 773, 842, 865, 1217, 1400, 1533
ApoI	RAATTY	5 cut(s)	401, 574, 935, 1465, 2125
Asp700I	GAANNNNTTC	2 cut(s)	591, 666
AspLEI	GCGC	3 cut(s)	239, 511, 1616
AspS9I	GGNCC	1 cut(s)	139
AsuC2I	CCSGG	3 cut(s)	582, 583, 2143
AsuHPI	GGTGA	8 cut(s)	178, 244, 341, 410, 421, 1634, 1886, 2055
AvaI	CYCGRG	3 cut(s)	581, 881, 1556
AvaII	GGWCC	1 cut(s)	139
BalI	TGGCCA	1 cut(s)	1323
BanII	GRGCYC	1 cut(s)	1610
BbsI	GAAGAC	3 cut(s)	20, 704, 918
Bbv12I	GWGCWC	2 cut(s)	1610, 1734
BbvI	GCAGC	8 cut(s)	163, 640, 760, 829, 877, 1204, 1412, 1520
BccI	CCATC	3 cut(s)	406, 602, 1745
BcgI	CGANNNNNNTGC	2 cut(s)	2151, 2185
BciVI	GTATCC	1 cut(s)	1187
BclI	TGATCA	2 cut(s)	318, 2029
BcnI	CCSGG	3 cut(s)	582, 583, 2143
BcoDI	GTCTC	3 cut(s)	257, 825, 963
BfaI	CTAG	3 cut(s)	143, 1455, 2277
BfmI	CTRYAG	2 cut(s)	774, 1218
BfrI	CTTAAG	2 cut(s)	869, 1487
BfuI	GTATCC	1 cut(s)	1187
BglI	GCCNNNNNGGC	1 cut(s)	53
BmcAI	AGTACT	1 cut(s)	1948
Bme1390I	CCNGG	3 cut(s)	582, 583, 2143
Bme18I	GGWCC	1 cut(s)	139
BmeT110I	CYCGRG	3 cut(s)	581, 881, 1556
BmgT120I	GGNCC	1 cut(s)	139
BmiI	GGNNCC	2 cut(s)	727, 1285
BmrFI	CCNGG	3 cut(s)	582, 583, 2143
BmrI	ACTGGG	3 cut(s)	472, 1065, 1196
BmsI	GCATC	6 cut(s)	496, 745, 973, 1210, 1867, 2275
BmuI	ACTGGG	3 cut(s)	472, 1065, 1196
BpiI	GAAGAC	3 cut(s)	20, 704, 918
BpmI	CTGGAG	1 cut(s)	756
BpuEI	CTTGAG	2 cut(s)	1032, 1822
BpuMI	CCSGG	3 cut(s)	582, 583, 2143
BsaJI	CCNNGG	4 cut(s)	581, 582, 1339, 1920
Bsc4I	CCNNNNNNNGG	3 cut(s)	587, 1186, 2149
Bse1I	ACTGG	5 cut(s)	385, 467, 1060, 1191, 1954
Bse3DI	GCAATG	6 cut(s)	126, 452, 966, 1702, 1954, 1984
BseDI	CCNNGG	4 cut(s)	581, 582, 1339, 1920
BseGI	GGATG	3 cut(s)	255, 493, 1201
BseLI	CCNNNNNNNGG	3 cut(s)	587, 1186, 2149
BseMI	GCAATG	6 cut(s)	126, 452, 966, 1702, 1954, 1984
BseNI	ACTGG	5 cut(s)	385, 467, 1060, 1191, 1954
BseRI	GAGGAG	1 cut(s)	578
BseXI	GCAGC	8 cut(s)	163, 640, 760, 829, 877, 1204, 1412, 1520
BseYI	CCCAGC	1 cut(s)	133
BsgI	GTGCAG	4 cut(s)	268, 1296, 1513, 1519
Bsh1236I	CGCG	1 cut(s)	164
Bsh1285I	CGRYCG	1 cut(s)	45
BshFI	GGCC	1 cut(s)	1323
BsiEI	CGRYCG	1 cut(s)	45
BsiHKAI	GWGCWC	2 cut(s)	1610, 1734
BsiHKCI	CYCGRG	3 cut(s)	581, 881, 1556
BsiSI	CCGG	2 cut(s)	582, 2143
BslFI	GGGAC	2 cut(s)	1252, 1443
BslI	CCNNNNNNNGG	3 cut(s)	587, 1186, 2149
BsmAI	GTCTC	3 cut(s)	257, 825, 963
BsmBI	CGTCTC	1 cut(s)	963
BsmFI	GGGAC	2 cut(s)	1252, 1443
BsmI	GAATGC	2 cut(s)	2133, 2252
BsnI	GGCC	1 cut(s)	1323
BsoBI	CYCGRG	3 cut(s)	581, 881, 1556
Bsp1286I	GDGCHC	2 cut(s)	1610, 1734
Bsp143I	GATC	8 cut(s)	318, 360, 527, 764, 1034, 1439, 1552, 2029
Bsp19I	CCATGG	1 cut(s)	1339
BspANI	GGCC	1 cut(s)	1323
BspFNI	CGCG	1 cut(s)	164
BspHI	TCATGA	1 cut(s)	1549
BspLI	GGNNCC	2 cut(s)	727, 1285
BspMAI	CTGCAG	2 cut(s)	778, 1222
BspPI	GGATC	2 cut(s)	1042, 1447
BspQI	GCTCTTC	1 cut(s)	1114
BspTI	CTTAAG	2 cut(s)	869, 1487
BsrDI	GCAATG	6 cut(s)	126, 452, 966, 1702, 1954, 1984
BsrI	ACTGG	5 cut(s)	385, 467, 1060, 1191, 1954
BssECI	CCNNGG	4 cut(s)	581, 582, 1339, 1920
BssMI	GATC	8 cut(s)	318, 360, 527, 764, 1034, 1439, 1552, 2029
BssT1I	CCWWGG	1 cut(s)	1339
Bst4CI	ACNGT	5 cut(s)	836, 974, 1074, 1520, 1847
Bst6I	CTCTTC	2 cut(s)	63, 1114
BstAFI	CTTAAG	2 cut(s)	869, 1487
BstAPI	GCANNNNNTGC	2 cut(s)	1226, 2189
BstC8I	GCNNGC	5 cut(s)	287, 876, 1247, 1268, 1451
BstDEI	CTNAG	2 cut(s)	214, 1167
BstDSI	CCRYGG	1 cut(s)	1339
BstF5I	GGATG	3 cut(s)	255, 493, 1201
BstFNI	CGCG	1 cut(s)	164
BstHHI	GCGC	3 cut(s)	239, 511, 1616
BstKTI	GATC	8 cut(s)	321, 363, 530, 767, 1037, 1442, 1555, 2032
BstMAI	GTCTC	3 cut(s)	257, 825, 963
BstMBI	GATC	8 cut(s)	318, 360, 527, 764, 1034, 1439, 1552, 2029
BstMCI	CGRYCG	1 cut(s)	45
BstMWI	GCNNNNNNNGC	8 cut(s)	53, 650, 779, 871, 1121, 1226, 1383, 2189
BstNSI	RCATGY	6 cut(s)	188, 243, 1245, 1249, 1270, 2166
BstSCI	CCNGG	3 cut(s)	580, 581, 2141
BstSFI	CTRYAG	2 cut(s)	774, 1218
BstUI	CGCG	1 cut(s)	164
BstV1I	GCAGC	8 cut(s)	163, 640, 760, 829, 877, 1204, 1412, 1520
BstV2I	GAAGAC	3 cut(s)	20, 704, 918
BstXI	CCANNNNNNTGG	3 cut(s)	1212, 1295, 1331
BsuI	GTATCC	1 cut(s)	1187
BsuRI	GGCC	1 cut(s)	1323
BtgI	CCRYGG	1 cut(s)	1339
BtsCI	GGATG	3 cut(s)	255, 493, 1201
BtsI	GCAGTG	5 cut(s)	1501, 1645, 1717, 1771, 1897
BtsIMutI	CAGTG	8 cut(s)	1184, 1501, 1516, 1645, 1717, 1771, 1852, 1897
Cac8I	GCNNGC	5 cut(s)	287, 876, 1247, 1268, 1451
CaiI	CAGNNNCTG	1 cut(s)	782
CciI	TCATGA	1 cut(s)	1549
CfoI	GCGC	3 cut(s)	239, 511, 1616
Cfr13I	GGNCC	1 cut(s)	139
Cfr9I	CCCGGG	1 cut(s)	581
Csp6I	GTAC	2 cut(s)	384, 1947
CviQI	GTAC	2 cut(s)	384, 1947
DdeI	CTNAG	2 cut(s)	214, 1167
DpnI	GATC	8 cut(s)	320, 362, 529, 766, 1036, 1441, 1554, 2031
DpnII	GATC	8 cut(s)	318, 360, 527, 764, 1034, 1439, 1552, 2029
DraI	TTTAAA	1 cut(s)	940
EaeI	YGGCCR	1 cut(s)	1321
Eam1104I	CTCTTC	2 cut(s)	63, 1114
EarI	CTCTTC	2 cut(s)	63, 1114
Ecl136II	GAGCTC	1 cut(s)	1608
Eco130I	CCWWGG	1 cut(s)	1339
Eco24I	GRGCYC	1 cut(s)	1610
Eco32I	GATATC	1 cut(s)	619
Eco47I	GGWCC	1 cut(s)	139
Eco53kI	GAGCTC	1 cut(s)	1608
Eco57I	CTGAAG	2 cut(s)	51, 930
Eco88I	CYCGRG	3 cut(s)	581, 881, 1556
EcoICRI	GAGCTC	1 cut(s)	1608
EcoRI	GAATTC	1 cut(s)	2125
EcoRV	GATATC	1 cut(s)	619
EcoT14I	CCWWGG	1 cut(s)	1339
EcoT22I	ATGCAT	1 cut(s)	1247
EcoT38I	GRGCYC	1 cut(s)	1610
ErhI	CCWWGG	1 cut(s)	1339
Esp3I	CGTCTC	1 cut(s)	963
FaqI	GGGAC	2 cut(s)	1252, 1443
FauI	CCCGC	2 cut(s)	739, 2086
FbaI	TGATCA	2 cut(s)	318, 2029
FokI	GGATG	3 cut(s)	242, 480, 1188
FriOI	GRGCYC	1 cut(s)	1610
FspBI	CTAG	3 cut(s)	143, 1455, 2277
FspI	TGCGCA	1 cut(s)	1615
GlaI	GCGC	3 cut(s)	238, 510, 1615
GsaI	CCCAGC	1 cut(s)	137
GsuI	CTGGAG	1 cut(s)	756
HaeIII	GGCC	1 cut(s)	1323
HapII	CCGG	2 cut(s)	582, 2143
HhaI	GCGC	3 cut(s)	239, 511, 1616
Hin6I	GCGC	3 cut(s)	237, 509, 1614
HinP1I	GCGC	3 cut(s)	237, 509, 1614
HincII	GTYRAC	3 cut(s)	517, 1689, 1941
HindII	GTYRAC	3 cut(s)	517, 1689, 1941
HindIII	AAGCTT	1 cut(s)	1471
HpaII	CCGG	2 cut(s)	582, 2143
HphI	GGTGA	8 cut(s)	178, 244, 341, 410, 421, 1634, 1886, 2055
Hpy166II	GTNNAC	6 cut(s)	190, 517, 1409, 1484, 1689, 1941
Hpy188I	TCNGA	8 cut(s)	318, 754, 1381, 1444, 1924, 2037, 2173, 2299
Hpy188III	TCNNGA	9 cut(s)	309, 358, 881, 1032, 1049, 1237, 1550, 1556, 2051
Hpy8I	GTNNAC	6 cut(s)	190, 517, 1409, 1484, 1689, 1941
Hpy99I	CGWCG	1 cut(s)	2080
HpyAV	CCTTC	6 cut(s)	581, 674, 941, 1613, 1865, 2236
HpyCH4III	ACNGT	5 cut(s)	836, 974, 1074, 1520, 1847
HpyCH4IV	ACGT	2 cut(s)	1083, 2012
HpyF10VI	GCNNNNNNNGC	8 cut(s)	53, 650, 779, 871, 1121, 1226, 1383, 2189
HpyF3I	CTNAG	2 cut(s)	214, 1167
HpySE526I	ACGT	2 cut(s)	1083, 2012
HspAI	GCGC	3 cut(s)	237, 509, 1614
Ksp22I	TGATCA	2 cut(s)	318, 2029
Kzo9I	GATC	8 cut(s)	318, 360, 527, 764, 1034, 1439, 1552, 2029
LguI	GCTCTTC	1 cut(s)	1114
LmnI	GCTCC	4 cut(s)	198, 790, 1855, 2144
Lsp1109I	GCAGC	8 cut(s)	163, 640, 760, 829, 877, 1204, 1412, 1520
LweI	GCATC	6 cut(s)	496, 745, 973, 1210, 1867, 2275
MaeI	CTAG	3 cut(s)	143, 1455, 2277
MaeII	ACGT	2 cut(s)	1083, 2012
MaeIII	GTNAC	5 cut(s)	274, 329, 707, 1496, 1560
MalI	GATC	8 cut(s)	320, 362, 529, 766, 1036, 1441, 1554, 2031
MboI	GATC	8 cut(s)	318, 360, 527, 764, 1034, 1439, 1552, 2029
MboII	GAAGA	9 cut(s)	25, 44, 80, 537, 709, 923, 1131, 1656, 1757
MfeI	CAATTG	3 cut(s)	193, 675, 2307
MhlI	GDGCHC	2 cut(s)	1610, 1734
MlsI	TGGCCA	1 cut(s)	1323
MluNI	TGGCCA	1 cut(s)	1323
MlyI	GAGTC	4 cut(s)	747, 1568, 1600, 1764
MmeI	TCCRAC	3 cut(s)	695, 1132, 2181
Mox20I	TGGCCA	1 cut(s)	1323
Mph1103I	ATGCAT	1 cut(s)	1247
MroXI	GAANNNNTTC	2 cut(s)	591, 666
MscI	TGGCCA	1 cut(s)	1323
MseI	TTAA	8 cut(s)	810, 870, 930, 939, 1394, 1463, 1488, 1680
MslI	CAYNNNNRTG	8 cut(s)	244, 858, 1250, 1293, 1329, 1521, 1578, 2193
Msp20I	TGGCCA	1 cut(s)	1323
MspA1I	CMGCKG	4 cut(s)	137, 176, 734, 2150
MspCI	CTTAAG	2 cut(s)	869, 1487
MspI	CCGG	2 cut(s)	582, 2143
MspR9I	CCNGG	3 cut(s)	582, 583, 2143
MunI	CAATTG	3 cut(s)	193, 675, 2307
Mva1269I	GAATGC	2 cut(s)	2133, 2252
MvnI	CGCG	1 cut(s)	164
MwoI	GCNNNNNNNGC	8 cut(s)	53, 650, 779, 871, 1121, 1226, 1383, 2189
NciI	CCSGG	3 cut(s)	582, 583, 2143
NcoI	CCATGG	1 cut(s)	1339
NdeII	GATC	8 cut(s)	318, 360, 527, 764, 1034, 1439, 1552, 2029
NlaIV	GGNNCC	2 cut(s)	727, 1285
NmuCI	GTSAC	4 cut(s)	274, 329, 1496, 1560
NsbI	TGCGCA	1 cut(s)	1615
NsiI	ATGCAT	1 cut(s)	1247
NspI	RCATGY	6 cut(s)	188, 243, 1245, 1249, 1270, 2166
PaeI	GCATGC	2 cut(s)	1249, 1270
PaeR7I	CTCGAG	2 cut(s)	881, 1556
PagI	TCATGA	1 cut(s)	1549
PciI	ACATGT	1 cut(s)	184
PciSI	GCTCTTC	1 cut(s)	1114
PctI	GAATGC	2 cut(s)	2133, 2252
PdmI	GAANNNNTTC	2 cut(s)	591, 666
PfeI	GAWTC	6 cut(s)	102, 169, 343, 924, 1997, 2111
PfoI	TCCNGGA	1 cut(s)	2141
PleI	GAGTC	4 cut(s)	746, 1567, 1599, 1763
PpsI	GAGTC	4 cut(s)	746, 1567, 1599, 1763
PscI	ACATGT	1 cut(s)	184
Psp124BI	GAGCTC	1 cut(s)	1610
Psp1406I	AACGTT	1 cut(s)	2012
PspFI	CCCAGC	1 cut(s)	133
PspN4I	GGNNCC	2 cut(s)	727, 1285
PspPI	GGNCC	1 cut(s)	139
PstI	CTGCAG	2 cut(s)	778, 1222
PstNI	CAGNNNCTG	1 cut(s)	782
PvuII	CAGCTG	1 cut(s)	176
RsaI	GTAC	2 cut(s)	385, 1948
RsaNI	GTAC	2 cut(s)	384, 1947
RseI	CAYNNNNRTG	8 cut(s)	244, 858, 1250, 1293, 1329, 1521, 1578, 2193
SacI	GAGCTC	1 cut(s)	1610
SapI	GCTCTTC	1 cut(s)	1114
SaqAI	TTAA	8 cut(s)	810, 870, 930, 939, 1394, 1463, 1488, 1680
Sau3AI	GATC	8 cut(s)	318, 360, 527, 764, 1034, 1439, 1552, 2029
Sau96I	GGNCC	1 cut(s)	139
ScaI	AGTACT	1 cut(s)	1948
SchI	GAGTC	4 cut(s)	747, 1568, 1600, 1764
ScrFI	CCNGG	3 cut(s)	582, 583, 2143
SduI	GDGCHC	2 cut(s)	1610, 1734
SfaNI	GCATC	6 cut(s)	496, 745, 973, 1210, 1867, 2275
SfcI	CTRYAG	2 cut(s)	774, 1218
Sfr274I	CTCGAG	2 cut(s)	881, 1556
SinI	GGWCC	1 cut(s)	139
SlaI	CTCGAG	2 cut(s)	881, 1556
SmaI	CCCGGG	1 cut(s)	583
SmiMI	CAYNNNNRTG	8 cut(s)	244, 858, 1250, 1293, 1329, 1521, 1578, 2193
SmlI	CTYRAG	6 cut(s)	869, 881, 1047, 1487, 1556, 1837
SmoI	CTYRAG	6 cut(s)	869, 881, 1047, 1487, 1556, 1837
SphI	GCATGC	2 cut(s)	1249, 1270
SspMI	CTAG	3 cut(s)	143, 1455, 2277
SstI	GAGCTC	1 cut(s)	1610
StyD4I	CCNGG	3 cut(s)	580, 581, 2141
StyI	CCWWGG	1 cut(s)	1339
TaaI	ACNGT	5 cut(s)	836, 974, 1074, 1520, 1847
TaiI	ACGT	2 cut(s)	1086, 2015
TaqI	TCGA	5 cut(s)	66, 763, 882, 1557, 1712
TatI	WGTACW	1 cut(s)	1946
TauI	GCSGC	4 cut(s)	302, 848, 1725, 2120
TfiI	GAWTC	6 cut(s)	102, 169, 343, 924, 1997, 2111
Tru1I	TTAA	8 cut(s)	810, 870, 930, 939, 1394, 1463, 1488, 1680
Tru9I	TTAA	8 cut(s)	810, 870, 930, 939, 1394, 1463, 1488, 1680
TscAI	CASTG	8 cut(s)	1191, 1501, 1523, 1652, 1724, 1778, 1852, 1904
TseFI	GTSAC	4 cut(s)	274, 329, 1496, 1560
TseI	GCWGC	8 cut(s)	176, 653, 773, 842, 865, 1217, 1400, 1533
Tsp45I	GTSAC	4 cut(s)	274, 329, 1496, 1560
TspDTI	ATGAA	7 cut(s)	94, 584, 1539, 1817, 2010, 2177, 2255
TspGWI	ACGGA	1 cut(s)	419
TspMI	CCCGGG	1 cut(s)	581
TspRI	CASTG	8 cut(s)	1191, 1501, 1523, 1652, 1724, 1778, 1852, 1904
Vha464I	CTTAAG	2 cut(s)	869, 1487
VpaK11BI	GGWCC	1 cut(s)	139
XapI	RAATTY	5 cut(s)	401, 574, 935, 1465, 2125
XceI	RCATGY	6 cut(s)	188, 243, 1245, 1249, 1270, 2166
XhoI	CTCGAG	2 cut(s)	881, 1556
XmaI	CCCGGG	1 cut(s)	581
XmnI	GAANNNNTTC	2 cut(s)	591, 666
XspI	CTAG	3 cut(s)	143, 1455, 2277
ZrmI	AGTACT	1 cut(s)	1948
Zsp2I	ATGCAT	1 cut(s)	1247

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.