pycom14g06910

pantothenate kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
Physical Location & Seq
Forward (+)
6874059 .. 6874692
634 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom14g06910.2

Sequence Viewer

Length: 390 bp
ATGAAGTGTGAATTCCAACAATTTCTCTTTATCTTGTTTATGTTTCCTACCTTATTGTTCTTCACTTTCTACACATTGGAATTACAGAGATTTCAAAACCCTGGCTTTTTATTTAATTTTTGGAGCCCAATTGCTCAAATTCTCATGATTTTTAGATTGTGTTTGTGTTTGTTTTGTCTGTTGGCAGGTTCTCTGATAAAATTGGTGTATTTCTCAACGAACAGTGACGATTCGTCTTCTTCGAATGAGAGTTTAGTAGCTTCTAATGGCGATAGAGGGCATCCTATTCTTGAAGGGAAGCTCCATTTTGCAAAGTTTGAAACTCAAAAAATCAATGACTGTATAGACTTCATTCAATCCAAGCAACTTCGCCTTACTGAATTTTTGTAG

Protein Analysis

130

Amino Acids

15.08

Weight (kDa)

6.06

Isoelectric Point (pI)

34.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 176
AcsI RAATTY 3 cut(s) 11, 138, 380
AgsI TTSAA 4 cut(s) 95, 293, 320, 356
AhdI GACNNNNNGTC 1 cut(s) 232
AjnI CCWGG 1 cut(s) 100
AluBI AGCT 2 cut(s) 260, 301
AluI AGCT 2 cut(s) 260, 301
ApoI RAATTY 3 cut(s) 11, 138, 380
AsuII TTCGAA 1 cut(s) 242
BanII GRGCYC 1 cut(s) 128
BbsI GAAGAC 1 cut(s) 228
BciT130I CCWGG 1 cut(s) 102
BfuAI ACCTGC 1 cut(s) 176
Bme1390I CCNGG 1 cut(s) 102
BmeRI GACNNNNNGTC 1 cut(s) 232
BmiI GGNNCC 1 cut(s) 125
BmrFI CCNGG 1 cut(s) 102
BmsI GCATC 1 cut(s) 289
BpiI GAAGAC 1 cut(s) 228
Bpu14I TTCGAA 1 cut(s) 242
BsaJI CCNNGG 1 cut(s) 100
BseBI CCWGG 1 cut(s) 102
BseDI CCNNGG 1 cut(s) 100
BseGI GGATG 1 cut(s) 280
Bsp119I TTCGAA 1 cut(s) 242
Bsp1286I GDGCHC 1 cut(s) 128
BspHI TCATGA 1 cut(s) 144
BspLI GGNNCC 1 cut(s) 125
BspMI ACCTGC 1 cut(s) 176
BspT104I TTCGAA 1 cut(s) 242
BssECI CCNNGG 1 cut(s) 100
Bst2UI CCWGG 1 cut(s) 102
Bst4CI ACNGT 2 cut(s) 224, 341
BstBI TTCGAA 1 cut(s) 242
BstF5I GGATG 1 cut(s) 280
BstNI CCWGG 1 cut(s) 102
BstSCI CCNGG 1 cut(s) 100
BstV2I GAAGAC 1 cut(s) 228
BtsCI GGATG 1 cut(s) 280
BtsIMutI CAGTG 1 cut(s) 229
BveI ACCTGC 1 cut(s) 176
CciI TCATGA 1 cut(s) 144
CviAII CATG 1 cut(s) 145
CviJI RGCY 4 cut(s) 105, 126, 260, 301
CviKI_1 RGCY 4 cut(s) 105, 126, 260, 301
DriI GACNNNNNGTC 1 cut(s) 232
Eam1105I GACNNNNNGTC 1 cut(s) 232
Eco24I GRGCYC 1 cut(s) 128
EcoRI GAATTC 1 cut(s) 11
EcoRII CCWGG 1 cut(s) 100
EcoT38I GRGCYC 1 cut(s) 128
FaeI CATG 1 cut(s) 148
FaiI YATR 3 cut(s) 41, 146, 344
FatI CATG 1 cut(s) 144
FokI GGATG 1 cut(s) 267
FriOI GRGCYC 1 cut(s) 128
Hin1II CATG 1 cut(s) 148
HinfI GANTC 1 cut(s) 230
Hpy188I TCNGA 1 cut(s) 195
Hpy188III TCNNGA 2 cut(s) 145, 290
HpyAV CCTTC 1 cut(s) 287
HpyCH4III ACNGT 2 cut(s) 224, 341
HpyCH4V TGCA 1 cut(s) 311
Hsp92II CATG 1 cut(s) 148
LmnI GCTCC 2 cut(s) 123, 306
LpnPI CCDG 3 cut(s) 87, 114, 171
LweI GCATC 1 cut(s) 289
MaeIII GTNAC 1 cut(s) 224
MboII GAAGA 3 cut(s) 52, 228, 231
MfeI CAATTG 1 cut(s) 129
MhlI GDGCHC 1 cut(s) 128
MluCI AATT 8 cut(s) 11, 20, 80, 115, 129, 138, 200, 380
MmeI TCCRAC 1 cut(s) 40
MnlI CCTC 1 cut(s) 269
MseI TTAA 1 cut(s) 114
MspR9I CCNGG 1 cut(s) 102
MunI CAATTG 1 cut(s) 129
MvaI CCWGG 1 cut(s) 102
NlaIII CATG 1 cut(s) 148
NlaIV GGNNCC 1 cut(s) 125
NmuCI GTSAC 1 cut(s) 224
NspV TTCGAA 1 cut(s) 242
PagI TCATGA 1 cut(s) 144
PcsI WCGNNNNNNNCGW 1 cut(s) 239
PfeI GAWTC 1 cut(s) 230
Psp6I CCWGG 1 cut(s) 100
PspGI CCWGG 1 cut(s) 100
PspN4I GGNNCC 1 cut(s) 125
SaqAI TTAA 1 cut(s) 114
ScrFI CCNGG 1 cut(s) 102
SduI GDGCHC 1 cut(s) 128
SetI ASST 4 cut(s) 53, 190, 262, 303
SfaNI GCATC 1 cut(s) 289
SfuI TTCGAA 1 cut(s) 242
SgeI CNNG 7 cut(s) 46, 113, 114, 157, 198, 302, 373
Sse9I AATT 8 cut(s) 11, 20, 80, 115, 129, 138, 200, 380
StyD4I CCNGG 1 cut(s) 100
TaaI ACNGT 2 cut(s) 224, 341
TaqI TCGA 1 cut(s) 242
TasI AATT 8 cut(s) 11, 20, 80, 115, 129, 138, 200, 380
TfiI GAWTC 1 cut(s) 230
Tru1I TTAA 1 cut(s) 114
Tru9I TTAA 1 cut(s) 114
TscAI CASTG 1 cut(s) 229
TseFI GTSAC 1 cut(s) 224
Tsp45I GTSAC 1 cut(s) 224
TspDTI ATGAA 2 cut(s) 17, 340
TspRI CASTG 1 cut(s) 229
XapI RAATTY 3 cut(s) 11, 138, 380
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.