Protein of unknown function (DUF3223)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G62440 |
| fragaria_vesca | FvH4_5g14920 |
| malus_domestica | MD06G1193500.v1.1 MD14G1200600.v1.1 |
| prunus_persica | Prupe.5G193800_v2.0.a1 |
| pyrus_communis | pycom06g17160 pycom14g16630 |
| rosa_chinensis | RchiOBHm_Chr7g0181461 |
| rosa_laevigata | RLG00000005192 |
| rosa_multiflora | Rmu_sc0004621.1_g000022 |
| rosa_roxburghii | Rroxscaffold_3G00271980 |
| rosa_rugosa | Rorug06G0441500 |
| rosa_samantha | Rh7AG043300 Rh7BG042700 Rh7CG044500 Rh7DG043100 |
| rosa_wichuraiana | Rw7G003600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 465 |
| AatII | GACGTC | 1 cut(s) | 206 |
| Acc36I | ACCTGC | 1 cut(s) | 465 |
| AciI | CCGC | 5 cut(s) | 36, 39, 86, 128, 145 |
| AcsI | RAATTY | 1 cut(s) | 320 |
| AcuI | CTGAAG | 2 cut(s) | 57, 508 |
| AcyI | GRCGYC | 2 cut(s) | 111, 203 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 120, 493 |
| AflII | CTTAAG | 1 cut(s) | 389 |
| AluBI | AGCT | 2 cut(s) | 267, 522 |
| AluI | AGCT | 2 cut(s) | 267, 522 |
| Alw26I | GTCTC | 1 cut(s) | 194 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 80 |
| AoxI | GGCC | 1 cut(s) | 335 |
| ApeKI | GCWGC | 1 cut(s) | 83 |
| ApoI | RAATTY | 1 cut(s) | 320 |
| AseI | ATTAAT | 1 cut(s) | 117 |
| AspLEI | GCGC | 1 cut(s) | 50 |
| AspS9I | GGNCC | 2 cut(s) | 272, 453 |
| AvaII | GGWCC | 2 cut(s) | 272, 453 |
| BbsI | GAAGAC | 1 cut(s) | 194 |
| BbvI | GCAGC | 1 cut(s) | 70 |
| BccI | CCATC | 2 cut(s) | 38, 465 |
| BcoDI | GTCTC | 1 cut(s) | 194 |
| BfoI | RGCGCY | 1 cut(s) | 51 |
| BfrI | CTTAAG | 1 cut(s) | 389 |
| BfuAI | ACCTGC | 1 cut(s) | 465 |
| BisI | GCNGC | 3 cut(s) | 39, 84, 87 |
| BlsI | GCNGC | 3 cut(s) | 40, 85, 88 |
| Bme18I | GGWCC | 2 cut(s) | 272, 453 |
| BmgT120I | GGNCC | 2 cut(s) | 272, 453 |
| BmiI | GGNNCC | 2 cut(s) | 273, 455 |
| BmsI | GCATC | 1 cut(s) | 169 |
| BpiI | GAAGAC | 1 cut(s) | 194 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 122, 154 |
| Bsa29I | ATCGAT | 1 cut(s) | 538 |
| BsaHI | GRCGYC | 2 cut(s) | 111, 203 |
| BsaJI | CCNNGG | 1 cut(s) | 24 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 218, 248 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 120, 493 |
| Bse1I | ACTGG | 1 cut(s) | 338 |
| BseCI | ATCGAT | 1 cut(s) | 538 |
| BseDI | CCNNGG | 1 cut(s) | 24 |
| BseGI | GGATG | 1 cut(s) | 457 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 120, 493 |
| BseNI | ACTGG | 1 cut(s) | 338 |
| BseRI | GAGGAG | 2 cut(s) | 173, 242 |
| BseXI | GCAGC | 1 cut(s) | 70 |
| BshFI | GGCC | 1 cut(s) | 337 |
| BshVI | ATCGAT | 1 cut(s) | 538 |
| BsiSI | CCGG | 1 cut(s) | 209 |
| BslFI | GGGAC | 1 cut(s) | 167 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 120, 493 |
| BsmAI | GTCTC | 1 cut(s) | 194 |
| BsmBI | CGTCTC | 1 cut(s) | 194 |
| BsmFI | GGGAC | 1 cut(s) | 167 |
| BsmI | GAATGC | 1 cut(s) | 440 |
| BsnI | GGCC | 1 cut(s) | 337 |
| Bsp143I | GATC | 3 cut(s) | 343, 535, 539 |
| BspACI | CCGC | 5 cut(s) | 36, 39, 86, 128, 145 |
| BspANI | GGCC | 1 cut(s) | 337 |
| BspDI | ATCGAT | 1 cut(s) | 538 |
| BspLI | GGNNCC | 2 cut(s) | 273, 455 |
| BspMI | ACCTGC | 1 cut(s) | 465 |
| BspTI | CTTAAG | 1 cut(s) | 389 |
| BsrI | ACTGG | 1 cut(s) | 338 |
| BssECI | CCNNGG | 1 cut(s) | 24 |
| BssMI | GATC | 3 cut(s) | 343, 535, 539 |
| BssNI | GRCGYC | 2 cut(s) | 111, 203 |
| Bst4CI | ACNGT | 1 cut(s) | 222 |
| Bst6I | CTCTTC | 1 cut(s) | 272 |
| BstACI | GRCGYC | 2 cut(s) | 111, 203 |
| BstAFI | CTTAAG | 1 cut(s) | 389 |
| BstC8I | GCNNGC | 1 cut(s) | 81 |
| BstDEI | CTNAG | 1 cut(s) | 183 |
| BstF5I | GGATG | 1 cut(s) | 457 |
| BstH2I | RGCGCY | 1 cut(s) | 51 |
| BstHHI | GCGC | 1 cut(s) | 50 |
| BstKTI | GATC | 3 cut(s) | 346, 538, 542 |
| BstMAI | GTCTC | 1 cut(s) | 194 |
| BstMBI | GATC | 3 cut(s) | 343, 535, 539 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 38, 47, 385 |
| BstV1I | GCAGC | 1 cut(s) | 70 |
| BstV2I | GAAGAC | 1 cut(s) | 194 |
| Bsu15I | ATCGAT | 1 cut(s) | 538 |
| BsuRI | GGCC | 1 cut(s) | 337 |
| BsuTUI | ATCGAT | 1 cut(s) | 538 |
| BtsCI | GGATG | 1 cut(s) | 457 |
| BveI | ACCTGC | 1 cut(s) | 465 |
| Cac8I | GCNNGC | 1 cut(s) | 81 |
| CaiI | CAGNNNCTG | 1 cut(s) | 80 |
| CfoI | GCGC | 1 cut(s) | 50 |
| Cfr13I | GGNCC | 2 cut(s) | 272, 453 |
| ClaI | ATCGAT | 1 cut(s) | 538 |
| CseI | GACGC | 1 cut(s) | 119 |
| CviAII | CATG | 1 cut(s) | 401 |
| CviJI | RGCY | 7 cut(s) | 32, 79, 89, 107, 267, 337, 522 |
| CviKI_1 | RGCY | 7 cut(s) | 32, 79, 89, 107, 267, 337, 522 |
| DdeI | CTNAG | 1 cut(s) | 183 |
| DpnI | GATC | 3 cut(s) | 345, 537, 541 |
| DpnII | GATC | 3 cut(s) | 343, 535, 539 |
| Eam1104I | CTCTTC | 1 cut(s) | 272 |
| EarI | CTCTTC | 1 cut(s) | 272 |
| EciI | GGCGGA | 1 cut(s) | 143 |
| Eco47I | GGWCC | 2 cut(s) | 272, 453 |
| Eco57I | CTGAAG | 2 cut(s) | 57, 508 |
| Esp3I | CGTCTC | 1 cut(s) | 194 |
| FaeI | CATG | 1 cut(s) | 404 |
| FaiI | YATR | 5 cut(s) | 57, 59, 363, 402, 468 |
| FaqI | GGGAC | 1 cut(s) | 167 |
| FatI | CATG | 1 cut(s) | 400 |
| FauI | CCCGC | 1 cut(s) | 138 |
| FauNDI | CATATG | 1 cut(s) | 57 |
| Fnu4HI | GCNGC | 3 cut(s) | 39, 84, 87 |
| FokI | GGATG | 1 cut(s) | 444 |
| Fsp4HI | GCNGC | 3 cut(s) | 39, 84, 87 |
| GlaI | GCGC | 1 cut(s) | 49 |
| GluI | GCNGC | 3 cut(s) | 39, 84, 87 |
| HaeII | RGCGCY | 1 cut(s) | 51 |
| HaeIII | GGCC | 1 cut(s) | 337 |
| HapII | CCGG | 1 cut(s) | 209 |
| HgaI | GACGC | 1 cut(s) | 119 |
| HhaI | GCGC | 1 cut(s) | 50 |
| Hin1I | GRCGYC | 2 cut(s) | 111, 203 |
| Hin1II | CATG | 1 cut(s) | 404 |
| Hin6I | GCGC | 1 cut(s) | 48 |
| HinP1I | GCGC | 1 cut(s) | 48 |
| HpaII | CCGG | 1 cut(s) | 209 |
| Hpy188I | TCNGA | 5 cut(s) | 28, 76, 276, 453, 544 |
| Hpy188III | TCNNGA | 1 cut(s) | 526 |
| Hpy99I | CGWCG | 3 cut(s) | 104, 208, 295 |
| HpyAV | CCTTC | 4 cut(s) | 164, 187, 236, 388 |
| HpyCH4III | ACNGT | 1 cut(s) | 222 |
| HpyCH4IV | ACGT | 2 cut(s) | 63, 203 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 38, 47, 385 |
| HpyF3I | CTNAG | 1 cut(s) | 183 |
| HpySE526I | ACGT | 2 cut(s) | 63, 203 |
| Hsp92I | GRCGYC | 2 cut(s) | 111, 203 |
| Hsp92II | CATG | 1 cut(s) | 404 |
| HspAI | GCGC | 1 cut(s) | 48 |
| Kzo9I | GATC | 3 cut(s) | 343, 535, 539 |
| LpnPI | CCDG | 8 cut(s) | 18, 93, 136, 222, 319, 356, 460, 511 |
| Lsp1109I | GCAGC | 1 cut(s) | 70 |
| LweI | GCATC | 1 cut(s) | 169 |
| MaeII | ACGT | 2 cut(s) | 63, 203 |
| MalI | GATC | 3 cut(s) | 345, 537, 541 |
| MboI | GATC | 3 cut(s) | 343, 535, 539 |
| MboII | GAAGA | 6 cut(s) | 199, 227, 289, 430, 475, 509 |
| MluCI | AATT | 2 cut(s) | 94, 320 |
| MmeI | TCCRAC | 1 cut(s) | 204 |
| MseI | TTAA | 2 cut(s) | 117, 390 |
| MspA1I | CMGCKG | 1 cut(s) | 41 |
| MspCI | CTTAAG | 1 cut(s) | 389 |
| MspI | CCGG | 1 cut(s) | 209 |
| Mva1269I | GAATGC | 1 cut(s) | 440 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 38, 47, 385 |
| NdeI | CATATG | 1 cut(s) | 57 |
| NdeII | GATC | 3 cut(s) | 343, 535, 539 |
| NlaIII | CATG | 1 cut(s) | 404 |
| NlaIV | GGNNCC | 2 cut(s) | 273, 455 |
| PaqCI | CACCTGC | 1 cut(s) | 465 |
| PctI | GAATGC | 1 cut(s) | 440 |
| PkrI | GCNGC | 3 cut(s) | 40, 85, 88 |
| PshBI | ATTAAT | 1 cut(s) | 117 |
| PspN4I | GGNNCC | 2 cut(s) | 273, 455 |
| PspPI | GGNCC | 2 cut(s) | 272, 453 |
| PstNI | CAGNNNCTG | 1 cut(s) | 80 |
| SaqAI | TTAA | 2 cut(s) | 117, 390 |
| SatI | GCNGC | 3 cut(s) | 39, 84, 87 |
| Sau3AI | GATC | 3 cut(s) | 343, 535, 539 |
| Sau96I | GGNCC | 2 cut(s) | 272, 453 |
| SetI | ASST | 7 cut(s) | 26, 66, 198, 206, 269, 479, 524 |
| SfaNI | GCATC | 1 cut(s) | 169 |
| SinI | GGWCC | 2 cut(s) | 272, 453 |
| SmlI | CTYRAG | 1 cut(s) | 389 |
| SmoI | CTYRAG | 1 cut(s) | 389 |
| Sse9I | AATT | 2 cut(s) | 94, 320 |
| SsiI | CCGC | 5 cut(s) | 36, 39, 86, 128, 145 |
| TaaI | ACNGT | 1 cut(s) | 222 |
| TaiI | ACGT | 2 cut(s) | 66, 206 |
| TaqI | TCGA | 4 cut(s) | 140, 306, 381, 538 |
| TasI | AATT | 2 cut(s) | 94, 320 |
| TauI | GCSGC | 2 cut(s) | 41, 89 |
| Tru1I | TTAA | 2 cut(s) | 117, 390 |
| Tru9I | TTAA | 2 cut(s) | 117, 390 |
| TseI | GCWGC | 1 cut(s) | 83 |
| TspDTI | ATGAA | 1 cut(s) | 516 |
| TspGWI | ACGGA | 1 cut(s) | 450 |
| Vha464I | CTTAAG | 1 cut(s) | 389 |
| VpaK11BI | GGWCC | 2 cut(s) | 272, 453 |
| VspI | ATTAAT | 1 cut(s) | 117 |
| XapI | RAATTY | 1 cut(s) | 320 |
| ZraI | GACGTC | 1 cut(s) | 204 |