pycom15g03170

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
1982400 .. 1985638
3239 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1440 bp
ATGGCCCCCATGAGCCAGATTCTCCAAGATTTCCAAGCAATGCCCCTTGCAGTCCCTGCTGCCATTGCTGCTCTGTCTCTGTTCTTCCTGTTTTCCTTCAAATCTTTCGTCTTTACCAAGAAGAATGCTTTTTCCAAACTCCCTTCTGTTCCAGTTGTGCCAGGGCTGCCTCTGGTGGGGAACTTGCTGCAGCTGAAGGAGAAGAAGCCGTACAAGACGTTTACTAGGTGGGCCGAGGAGTACGGTCCAATATATTCCATCAAGACTGGTGCTTCCACCATGGTTGTTCTCAATTCAACTGATGTCGCCAAAGAGGTAGATTTCTTTTACTCAATAATCATTATGGAATACGCCATGGTGACCAGATATCCGTCCATGTCAACGAAAAAGCTATCAAATGCACTAAAGATTCTCACTTTCGATAAATGTATGGTTGCAATAAGTGACTACAACGATTTTCACAAGATGATAAAACGATACATACTCACAAATGTTCTTGGAGCGAATGCCCAGGCTATAGGTAAGAACATAGAAGACGGCATTTATGTGGAGGAGCTTGGTACTACATTATCAAGAGACGAGATCTTTAAGGTTCTTGTGCTTGACATAATGGAGGGTGCAATCGAGGTTGATTGGAGAGACTTCTTCCCTTACCTGAGATGGGTTCCTAATAAGACCATAGAAAATAAAATTCAGAGACTCTATCACCGCAGGAAAGCAGTAATGAATGCCCTGATCGAGGAGCAGAAGAAGCGAATTGCTTCAGGAGAGGAATTGAATTGTTATATTGACTACTTGCTTTCTGAAGCAAAAACGCTAACACCAGAGCAAATAGCCATGTTGCTTTGGGAGACAATTATCGAGACAGCGGATACTACATTGGTAACAACAGAGTGGGCTATGTATGAACTTGCAAAAGATCAGAAACGACAGCATCGTCTCCTTGAAGAAATCCAAAATGTTTATGGAACCAACAAGATTACAGAGGAACACTTGTCCCAGATGCCGTATCTAGGTGCTGTTTTCCATGAGACTTTAAGGAAGCACAGTCCAGCTCCTATAGTTCCTCTAAGATATGTGCACGAAGATACCCAATTAGGCGGTTACTATGTTTCAGCCGGAACAGAGATCGCGATTAACATATACGGGTGCAACATGGACAAGAACCAATGGGAAAGCCCCGAAGAATGGAAGCCAGAGAGATTTTTGGAACCGAAATACGATCCAATGGATTTGTACAAGACAATGGCGTTTGGAGCCGGAAAGAGGGTGTGTGCCGGTTCTCTTCAGGCGATGCTGATAGCGTGCACCACCATCGGAAGGCTGGTACAGGAGTTTGAGTGGAAGCTGAGAGATGGAGAAGAGGAAAATGTGGACACCGTCGGGCTCACCACTCACAAACTGCATCCAATGCATGCAATCCTCAAACCAAGAAATTAG

Protein Analysis

480

Amino Acids

54.91

Weight (kDa)

6.26

Isoelectric Point (pI)

51.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 53 - 106 5.1e-09 Cytochrome P450
p450 PF00067 209 - 460 9.4e-61 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 936
AccII CGCG 1 cut(s) 1133
AciI CCGC 3 cut(s) 709, 869, 1101
AclWI GGATC 1 cut(s) 1217
AcsI RAATTY 1 cut(s) 690
AcuI CTGAAG 4 cut(s) 215, 747, 825, 1271
AfaI GTAC 5 cut(s) 212, 242, 562, 1238, 1329
AfiI CCNNNNNNNGG 7 cut(s) 176, 661, 739, 1013, 1188, 1266, 1320
AgsI TTSAA 4 cut(s) 100, 297, 778, 947
AjnI CCWGG 2 cut(s) 160, 510
AluBI AGCT 5 cut(s) 193, 391, 556, 1055, 1348
AluI AGCT 5 cut(s) 193, 391, 556, 1055, 1348
Alw21I GWGCWC 2 cut(s) 1083, 1310
Alw26I GTCTC 8 cut(s) 81, 570, 633, 691, 845, 857, 944, 1025
Alw44I GTGCAC 2 cut(s) 1079, 1306
AlwI GGATC 1 cut(s) 1217
AlwNI CAGNNNCTG 1 cut(s) 56
AoxI GGCC 2 cut(s) 3, 231
ApaLI GTGCAC 2 cut(s) 1079, 1306
ApeKI GCWGC 5 cut(s) 59, 68, 166, 187, 190
ApoI RAATTY 1 cut(s) 690
ArsI GACNNNNNNTTYG 2 cut(s) 93, 125
Asp700I GAANNNNTTC 1 cut(s) 760
AspS9I GGNCC 3 cut(s) 4, 231, 245
AsuHPI GGTGA 3 cut(s) 370, 698, 1381
AvaII GGWCC 1 cut(s) 245
BaeGI GKGCMC 2 cut(s) 1083, 1310
BaeI ACNNNNGTAYC 2 cut(s) 1319, 1352
BanII GRGCYC 1 cut(s) 1389
BarI GAAGNNNNNNTAC 2 cut(s) 194, 226
BbsI GAAGAC 1 cut(s) 540
Bbv12I GWGCWC 2 cut(s) 1083, 1310
BbvI GCAGC 5 cut(s) 46, 55, 153, 174, 202
BccI CCATC 4 cut(s) 266, 654, 1322, 1349
BceAI ACGGC 3 cut(s) 193, 553, 991
BcgI CGANNNNNNTGC 2 cut(s) 1297, 1331
BciT130I CCWGG 2 cut(s) 162, 512
BciVI GTATCC 1 cut(s) 865
BcoDI GTCTC 8 cut(s) 81, 570, 633, 691, 845, 857, 944, 1025
BfaI CTAG 2 cut(s) 225, 1013
BfmI CTRYAG 3 cut(s) 188, 516, 1059
BfuI GTATCC 1 cut(s) 865
BglII AGATCT 1 cut(s) 582
BisI GCNGC 5 cut(s) 60, 69, 167, 188, 191
BlsI GCNGC 5 cut(s) 61, 70, 168, 189, 192
Bme1390I CCNGG 2 cut(s) 162, 512
Bme18I GGWCC 1 cut(s) 245
BmgT120I GGNCC 3 cut(s) 4, 231, 245
BmiI GGNNCC 5 cut(s) 6, 666, 970, 1212, 1258
BmrFI CCNGG 2 cut(s) 162, 512
BmsI GCATC 4 cut(s) 943, 993, 1284, 1414
BpiI GAAGAC 1 cut(s) 540
BsaJI CCNNGG 5 cut(s) 161, 234, 279, 354, 510
BsaXI ACNNNNNCTCC 2 cut(s) 1325, 1355
Bsc4I CCNNNNNNNGG 7 cut(s) 176, 661, 739, 1013, 1188, 1266, 1320
Bse118I RCCGGY 1 cut(s) 1277
Bse1I ACTGG 2 cut(s) 152, 271
Bse3DI GCAATG 2 cut(s) 45, 63
BseBI CCWGG 2 cut(s) 162, 512
BseDI CCNNGG 5 cut(s) 161, 234, 279, 354, 510
BseGI GGATG 1 cut(s) 1405
BseLI CCNNNNNNNGG 7 cut(s) 176, 661, 739, 1013, 1188, 1266, 1320
BseMI GCAATG 2 cut(s) 45, 63
BseMII CTCAG 2 cut(s) 647, 1340
BseNI ACTGG 2 cut(s) 152, 271
BseRI GAGGAG 3 cut(s) 251, 566, 755
BseSI GKGCMC 2 cut(s) 1083, 1310
BseXI GCAGC 5 cut(s) 46, 55, 153, 174, 202
Bsh1236I CGCG 1 cut(s) 1133
BshFI GGCC 2 cut(s) 5, 233
BsiHKAI GWGCWC 2 cut(s) 1083, 1310
BsiSI CCGG 3 cut(s) 1119, 1260, 1278
BslFI GGGAC 2 cut(s) 38, 982
BslI CCNNNNNNNGG 7 cut(s) 176, 661, 739, 1013, 1188, 1266, 1320
BsmAI GTCTC 8 cut(s) 81, 570, 633, 691, 845, 857, 944, 1025
BsmBI CGTCTC 2 cut(s) 570, 944
BsmFI GGGAC 2 cut(s) 38, 982
BsmI GAATGC 3 cut(s) 130, 511, 733
BsnI GGCC 2 cut(s) 5, 233
Bsp1286I GDGCHC 3 cut(s) 1083, 1310, 1389
Bsp1407I TGTACA 1 cut(s) 1236
Bsp143I GATC 5 cut(s) 582, 735, 919, 1128, 1222
Bsp19I CCATGG 2 cut(s) 279, 354
Bsp68I TCGCGA 1 cut(s) 1133
BspACI CCGC 3 cut(s) 709, 869, 1101
BspANI GGCC 2 cut(s) 5, 233
BspCNI CTCAG 2 cut(s) 648, 1341
BspFNI CGCG 1 cut(s) 1133
BspLI GGNNCC 5 cut(s) 6, 666, 970, 1212, 1258
BspMAI CTGCAG 1 cut(s) 192
BspPI GGATC 1 cut(s) 1217
BsrDI GCAATG 2 cut(s) 45, 63
BsrFI RCCGGY 1 cut(s) 1277
BsrGI TGTACA 1 cut(s) 1236
BsrI ACTGG 2 cut(s) 152, 271
BssAI RCCGGY 1 cut(s) 1277
BssECI CCNNGG 5 cut(s) 161, 234, 279, 354, 510
BssMI GATC 5 cut(s) 582, 735, 919, 1128, 1222
BssT1I CCWWGG 2 cut(s) 279, 354
Bst2UI CCWGG 2 cut(s) 162, 512
Bst4CI ACNGT 3 cut(s) 245, 1049, 1381
Bst6I CTCTTC 2 cut(s) 1290, 1356
BstAPI GCANNNNNTGC 2 cut(s) 56, 1411
BstAUI TGTACA 1 cut(s) 1236
BstC8I GCNNGC 2 cut(s) 1306, 1416
BstDEI CTNAG 3 cut(s) 656, 1070, 1349
BstDSI CCRYGG 2 cut(s) 279, 354
BstEII GGTNACC 1 cut(s) 358
BstENI CCTNNNNNAGG 1 cut(s) 737
BstF5I GGATG 1 cut(s) 1405
BstFNI CGCG 1 cut(s) 1133
BstKTI GATC 5 cut(s) 585, 738, 922, 1131, 1225
BstMAI GTCTC 8 cut(s) 81, 570, 633, 691, 845, 857, 944, 1025
BstMBI GATC 5 cut(s) 582, 735, 919, 1128, 1222
BstMWI GCNNNNNNNGC 7 cut(s) 56, 65, 68, 166, 751, 1256, 1411
BstNI CCWGG 2 cut(s) 162, 512
BstNSI RCATGY 1 cut(s) 1418
BstPI GGTNACC 1 cut(s) 358
BstSCI CCNGG 2 cut(s) 160, 510
BstSFI CTRYAG 3 cut(s) 188, 516, 1059
BstSLI GKGCMC 2 cut(s) 1083, 1310
BstUI CGCG 1 cut(s) 1133
BstV1I GCAGC 5 cut(s) 46, 55, 153, 174, 202
BstV2I GAAGAC 1 cut(s) 540
BstX2I RGATCY 1 cut(s) 582
BstYI RGATCY 1 cut(s) 582
BsuI GTATCC 1 cut(s) 865
BsuRI GGCC 2 cut(s) 5, 233
BtgI CCRYGG 2 cut(s) 279, 354
BtgZI GCGATG 1 cut(s) 1307
BtsCI GGATG 1 cut(s) 1405
BtuMI TCGCGA 1 cut(s) 1133
Cac8I GCNNGC 2 cut(s) 1306, 1416
CaiI CAGNNNCTG 1 cut(s) 56
Cfr10I RCCGGY 1 cut(s) 1277
Cfr13I GGNCC 3 cut(s) 4, 231, 245
Csp6I GTAC 5 cut(s) 211, 241, 561, 1237, 1328
CspCI CAANNNNNGTGG 2 cut(s) 265, 300
CviAII CATG 8 cut(s) 10, 280, 355, 376, 838, 1028, 1156, 1415
CviQI GTAC 5 cut(s) 211, 241, 561, 1237, 1328
DdeI CTNAG 3 cut(s) 656, 1070, 1349
DpnI GATC 5 cut(s) 584, 737, 921, 1130, 1224
DpnII GATC 5 cut(s) 582, 735, 919, 1128, 1222
DrdI GACNNNNNNGTC 1 cut(s) 936
DseDI GACNNNNNNGTC 1 cut(s) 936
Eam1104I CTCTTC 2 cut(s) 1290, 1356
EarI CTCTTC 2 cut(s) 1290, 1356
Eco130I CCWWGG 2 cut(s) 279, 354
Eco24I GRGCYC 1 cut(s) 1389
Eco32I GATATC 1 cut(s) 368
Eco47I GGWCC 1 cut(s) 245
Eco57I CTGAAG 4 cut(s) 215, 747, 825, 1271
Eco91I GGTNACC 1 cut(s) 358
EcoNI CCTNNNNNAGG 1 cut(s) 737
EcoO65I GGTNACC 1 cut(s) 358
EcoRII CCWGG 2 cut(s) 160, 510
EcoRV GATATC 1 cut(s) 368
EcoT14I CCWWGG 2 cut(s) 279, 354
EcoT22I ATGCAT 1 cut(s) 1416
EcoT38I GRGCYC 1 cut(s) 1389
ErhI CCWWGG 2 cut(s) 279, 354
Esp3I CGTCTC 2 cut(s) 570, 944
FaeI CATG 8 cut(s) 13, 283, 358, 379, 841, 1031, 1159, 1418
FaqI GGGAC 2 cut(s) 38, 982
FatI CATG 8 cut(s) 9, 279, 354, 375, 837, 1027, 1155, 1414
Fnu4HI GCNGC 5 cut(s) 60, 69, 167, 188, 191
FokI GGATG 1 cut(s) 1392
FriOI GRGCYC 1 cut(s) 1389
Fsp4HI GCNGC 5 cut(s) 60, 69, 167, 188, 191
FspBI CTAG 2 cut(s) 225, 1013
GluI GCNGC 5 cut(s) 60, 69, 167, 188, 191
HaeIII GGCC 2 cut(s) 5, 233
HapII CCGG 3 cut(s) 1119, 1260, 1278
Hin1II CATG 8 cut(s) 13, 283, 358, 379, 841, 1031, 1159, 1418
HincII GTYRAC 1 cut(s) 381
HindII GTYRAC 1 cut(s) 381
HinfI GANTC 3 cut(s) 19, 409, 699
HpaII CCGG 3 cut(s) 1119, 1260, 1278
HphI GGTGA 3 cut(s) 370, 698, 1381
Hpy166II GTNNAC 5 cut(s) 222, 381, 1081, 1308, 1375
Hpy188I TCNGA 4 cut(s) 696, 805, 924, 1319
Hpy188III TCNNGA 5 cut(s) 262, 573, 765, 862, 1132
Hpy8I GTNNAC 5 cut(s) 222, 381, 1081, 1308, 1375
Hpy99I CGWCG 1 cut(s) 1385
HpyAV CCTTC 4 cut(s) 106, 153, 190, 1314
HpyCH4III ACNGT 3 cut(s) 245, 1049, 1381
HpyCH4IV ACGT 1 cut(s) 218
HpyF10VI GCNNNNNNNGC 7 cut(s) 56, 65, 68, 166, 751, 1256, 1411
HpyF3I CTNAG 3 cut(s) 656, 1070, 1349
HpySE526I ACGT 1 cut(s) 218
Hsp92II CATG 8 cut(s) 13, 283, 358, 379, 841, 1031, 1159, 1418
Kzo9I GATC 5 cut(s) 582, 735, 919, 1128, 1222
LmnI GCTCC 5 cut(s) 500, 553, 742, 1060, 1256
Lsp1109I GCAGC 5 cut(s) 46, 55, 153, 174, 202
LweI GCATC 4 cut(s) 943, 993, 1284, 1414
MaeI CTAG 2 cut(s) 225, 1013
MaeII ACGT 1 cut(s) 218
MaeIII GTNAC 4 cut(s) 358, 443, 883, 1103
MalI GATC 5 cut(s) 584, 737, 921, 1130, 1224
MboI GATC 5 cut(s) 582, 735, 919, 1128, 1222
MflI RGATCY 1 cut(s) 582
MhlI GDGCHC 3 cut(s) 1083, 1310, 1389
MluCI AATT 8 cut(s) 292, 690, 756, 773, 778, 855, 1094, 1435
MlyI GAGTC 1 cut(s) 693
Mph1103I ATGCAT 1 cut(s) 1416
MroXI GAANNNNTTC 1 cut(s) 760
MseI TTAA 3 cut(s) 588, 1037, 1137
MslI CAYNNNNRTG 1 cut(s) 545
MspA1I CMGCKG 2 cut(s) 193, 869
MspI CCGG 3 cut(s) 1119, 1260, 1278
MspR9I CCNGG 2 cut(s) 162, 512
Mva1269I GAATGC 3 cut(s) 130, 511, 733
MvaI CCWGG 2 cut(s) 162, 512
MvnI CGCG 1 cut(s) 1133
MwoI GCNNNNNNNGC 7 cut(s) 56, 65, 68, 166, 751, 1256, 1411
NcoI CCATGG 2 cut(s) 279, 354
NdeII GATC 5 cut(s) 582, 735, 919, 1128, 1222
NlaIII CATG 8 cut(s) 13, 283, 358, 379, 841, 1031, 1159, 1418
NlaIV GGNNCC 5 cut(s) 6, 666, 970, 1212, 1258
NmeAIII GCCGAG 1 cut(s) 259
NmuCI GTSAC 2 cut(s) 358, 443
NruI TCGCGA 1 cut(s) 1133
NsiI ATGCAT 1 cut(s) 1416
NspI RCATGY 1 cut(s) 1418
PaeI GCATGC 1 cut(s) 1418
PcsI WCGNNNNNNNCGW 1 cut(s) 934
PctI GAATGC 3 cut(s) 130, 511, 733
PdmI GAANNNNTTC 1 cut(s) 760
PfeI GAWTC 2 cut(s) 19, 409
PflFI GACNNNGTC 1 cut(s) 1379
PkrI GCNGC 5 cut(s) 61, 70, 168, 189, 192
PleI GAGTC 1 cut(s) 693
PpsI GAGTC 1 cut(s) 693
Psp6I CCWGG 2 cut(s) 160, 510
PspEI GGTNACC 1 cut(s) 358
PspGI CCWGG 2 cut(s) 160, 510
PspN4I GGNNCC 5 cut(s) 6, 666, 970, 1212, 1258
PspPI GGNCC 3 cut(s) 4, 231, 245
PstI CTGCAG 1 cut(s) 192
PstNI CAGNNNCTG 1 cut(s) 56
PsuI RGATCY 1 cut(s) 582
PsyI GACNNNGTC 1 cut(s) 1379
PvuII CAGCTG 1 cut(s) 193
RruI TCGCGA 1 cut(s) 1133
RsaI GTAC 5 cut(s) 212, 242, 562, 1238, 1329
RsaNI GTAC 5 cut(s) 211, 241, 561, 1237, 1328
RseI CAYNNNNRTG 1 cut(s) 545
SaqAI TTAA 3 cut(s) 588, 1037, 1137
SatI GCNGC 5 cut(s) 60, 69, 167, 188, 191
Sau3AI GATC 5 cut(s) 582, 735, 919, 1128, 1222
Sau96I GGNCC 3 cut(s) 4, 231, 245
SchI GAGTC 1 cut(s) 693
ScrFI CCNGG 2 cut(s) 162, 512
SduI GDGCHC 3 cut(s) 1083, 1310, 1389
SfaNI GCATC 4 cut(s) 943, 993, 1284, 1414
SfcI CTRYAG 3 cut(s) 188, 516, 1059
SinI GGWCC 1 cut(s) 245
SmiMI CAYNNNNRTG 1 cut(s) 545
SphI GCATGC 1 cut(s) 1418
Sse9I AATT 8 cut(s) 292, 690, 756, 773, 778, 855, 1094, 1435
SsiI CCGC 3 cut(s) 709, 869, 1101
SspMI CTAG 2 cut(s) 225, 1013
StyD4I CCNGG 2 cut(s) 160, 510
StyI CCWWGG 2 cut(s) 279, 354
TaaI ACNGT 3 cut(s) 245, 1049, 1381
TaiI ACGT 1 cut(s) 221
TaqI TCGA 4 cut(s) 420, 624, 738, 861
TasI AATT 8 cut(s) 292, 690, 756, 773, 778, 855, 1094, 1435
TatI WGTACW 1 cut(s) 1236
TfiI GAWTC 2 cut(s) 19, 409
Tru1I TTAA 3 cut(s) 588, 1037, 1137
Tru9I TTAA 3 cut(s) 588, 1037, 1137
TseFI GTSAC 2 cut(s) 358, 443
TseI GCWGC 5 cut(s) 59, 68, 166, 187, 190
Tsp45I GTSAC 2 cut(s) 358, 443
TspDTI ATGAA 2 cut(s) 740, 921
TspGWI ACGGA 1 cut(s) 360
Tth111I GACNNNGTC 1 cut(s) 1379
VneI GTGCAC 2 cut(s) 1079, 1306
VpaK11BI GGWCC 1 cut(s) 245
XagI CCTNNNNNAGG 1 cut(s) 737
XapI RAATTY 1 cut(s) 690
XceI RCATGY 1 cut(s) 1418
XcmI CCANNNNNNNNNTGG 2 cut(s) 962, 1321
XmnI GAANNNNTTC 1 cut(s) 760
XspI CTAG 2 cut(s) 225, 1013
Zsp2I ATGCAT 1 cut(s) 1416
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.