ribosome localization
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G20010 AT5G20020 |
| fragaria_vesca | FvH4_1g03920 FvH4_2g29671 |
| malus_domestica | MD02G1037500.v1.1 MD15G1120300.v1.1 MD15G1177700.v1.1 |
| prunus_persica | Prupe.1G473000_v2.0.a1 |
| pyrus_communis | pycom02g03070 pycom15g10830 pycom15g15910 |
| rosa_chinensis | RchiOBHm_Chr2g0089391 RchiOBHm_Chr6g0298641 |
| rosa_laevigata | RLG00000011497 RLG00000016023 |
| rosa_multiflora | Rmu_sc0000197.1_g000022 Rmu_sc0008099.1_g000010 Rmu_sc0023149.1_g000001 Rmu_sc0031564.1_g000001 Rmu_sc0034903.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00152000 Rroxscaffold_7G00169460 |
| rosa_rugosa | Rorug02G0000100 Rorug02G0000200 Rorug06G0281800 |
| rosa_samantha | Rh2AG045500 Rh2BG044000 Rh2CG045900 Rh2DG045400 Rh6AG393300 Rh6BG401100 Rh6CG407000 Rh6DG393700 |
| rosa_wichuraiana | Rw2G003710 Rw6G034390 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 517, 685 |
| Acc36I | ACCTGC | 3 cut(s) | 517, 532, 685 |
| AccB1I | GGYRCC | 1 cut(s) | 14 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 266 |
| AccII | CGCG | 1 cut(s) | 456 |
| AccIII | TCCGGA | 1 cut(s) | 691 |
| AciI | CCGC | 2 cut(s) | 62, 498 |
| AcoI | YGGCCR | 1 cut(s) | 630 |
| AcsI | RAATTY | 2 cut(s) | 67, 301 |
| AcuI | CTGAAG | 2 cut(s) | 12, 29 |
| AfaI | GTAC | 3 cut(s) | 50, 575, 717 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 266, 555 |
| AgsI | TTSAA | 4 cut(s) | 72, 172, 671, 742 |
| AjiI | CACGTC | 1 cut(s) | 447 |
| AjnI | CCWGG | 2 cut(s) | 627, 632 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 249, 281 |
| AleI | CACNNNNGTG | 1 cut(s) | 215 |
| AluBI | AGCT | 7 cut(s) | 120, 148, 168, 175, 338, 640, 752 |
| AluI | AGCT | 7 cut(s) | 120, 148, 168, 175, 338, 640, 752 |
| Aor13HI | TCCGGA | 1 cut(s) | 691 |
| AoxI | GGCC | 2 cut(s) | 308, 630 |
| ApeKI | GCWGC | 4 cut(s) | 117, 451, 749, 752 |
| ApoI | RAATTY | 2 cut(s) | 67, 301 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 617 |
| AspLEI | GCGC | 1 cut(s) | 456 |
| AspS9I | GGNCC | 1 cut(s) | 308 |
| AsuHPI | GGTGA | 4 cut(s) | 29, 538, 541, 666 |
| AsuII | TTCGAA | 1 cut(s) | 243 |
| BalI | TGGCCA | 1 cut(s) | 632 |
| BanI | GGYRCC | 1 cut(s) | 14 |
| BbsI | GAAGAC | 1 cut(s) | 212 |
| BbvI | GCAGC | 4 cut(s) | 129, 463, 739, 761 |
| BccI | CCATC | 4 cut(s) | 185, 234, 362, 404 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 106, 140 |
| BciT130I | CCWGG | 2 cut(s) | 629, 634 |
| BfmI | CTRYAG | 2 cut(s) | 115, 463 |
| BfuAI | ACCTGC | 3 cut(s) | 517, 532, 685 |
| BisI | GCNGC | 4 cut(s) | 118, 452, 750, 753 |
| BlsI | GCNGC | 4 cut(s) | 119, 453, 751, 754 |
| BmcAI | AGTACT | 2 cut(s) | 50, 575 |
| Bme1390I | CCNGG | 2 cut(s) | 629, 634 |
| BmgBI | CACGTC | 1 cut(s) | 447 |
| BmgT120I | GGNCC | 1 cut(s) | 308 |
| BmiI | GGNNCC | 1 cut(s) | 16 |
| BmrFI | CCNGG | 2 cut(s) | 629, 634 |
| BmsI | GCATC | 1 cut(s) | 736 |
| BpiI | GAAGAC | 1 cut(s) | 212 |
| BpmI | CTGGAG | 2 cut(s) | 255, 554 |
| Bpu14I | TTCGAA | 1 cut(s) | 243 |
| BsaBI | GATNNNNATC | 1 cut(s) | 780 |
| BsaWI | WCCGGW | 1 cut(s) | 691 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 266, 555 |
| Bse1I | ACTGG | 2 cut(s) | 238, 571 |
| Bse8I | GATNNNNATC | 1 cut(s) | 780 |
| BseAI | TCCGGA | 1 cut(s) | 691 |
| BseBI | CCWGG | 2 cut(s) | 629, 634 |
| BseGI | GGATG | 1 cut(s) | 280 |
| BseJI | GATNNNNATC | 1 cut(s) | 780 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 266, 555 |
| BseNI | ACTGG | 2 cut(s) | 238, 571 |
| BseRI | GAGGAG | 2 cut(s) | 76, 678 |
| BseXI | GCAGC | 4 cut(s) | 129, 463, 739, 761 |
| BseYI | CCCAGC | 2 cut(s) | 164, 327 |
| BsgI | GTGCAG | 1 cut(s) | 738 |
| Bsh1236I | CGCG | 1 cut(s) | 456 |
| BshFI | GGCC | 2 cut(s) | 310, 632 |
| BshNI | GGYRCC | 1 cut(s) | 14 |
| BsiSI | CCGG | 1 cut(s) | 692 |
| BslFI | GGGAC | 2 cut(s) | 344, 425 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 266, 555 |
| BsmFI | GGGAC | 2 cut(s) | 344, 425 |
| BsnI | GGCC | 2 cut(s) | 310, 632 |
| Bsp119I | TTCGAA | 1 cut(s) | 243 |
| Bsp13I | TCCGGA | 1 cut(s) | 691 |
| Bsp1407I | TGTACA | 1 cut(s) | 715 |
| Bsp143I | GATC | 4 cut(s) | 312, 457, 655, 781 |
| BspACI | CCGC | 2 cut(s) | 62, 498 |
| BspANI | GGCC | 2 cut(s) | 310, 632 |
| BspEI | TCCGGA | 1 cut(s) | 691 |
| BspFNI | CGCG | 1 cut(s) | 456 |
| BspLI | GGNNCC | 1 cut(s) | 16 |
| BspMAI | CTGCAG | 2 cut(s) | 119, 467 |
| BspMI | ACCTGC | 3 cut(s) | 517, 532, 685 |
| BspQI | GCTCTTC | 1 cut(s) | 141 |
| BspT104I | TTCGAA | 1 cut(s) | 243 |
| BspT107I | GGYRCC | 1 cut(s) | 14 |
| BsrGI | TGTACA | 1 cut(s) | 715 |
| BsrI | ACTGG | 2 cut(s) | 238, 571 |
| BssMI | GATC | 4 cut(s) | 312, 457, 655, 781 |
| Bst2UI | CCWGG | 2 cut(s) | 629, 634 |
| Bst4CI | ACNGT | 4 cut(s) | 19, 56, 154, 390 |
| Bst6I | CTCTTC | 1 cut(s) | 141 |
| BstAUI | TGTACA | 1 cut(s) | 715 |
| BstBI | TTCGAA | 1 cut(s) | 243 |
| BstC8I | GCNNGC | 1 cut(s) | 642 |
| BstEII | GGTNACC | 1 cut(s) | 544 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 553 |
| BstF5I | GGATG | 1 cut(s) | 280 |
| BstFNI | CGCG | 1 cut(s) | 456 |
| BstHHI | GCGC | 1 cut(s) | 456 |
| BstKTI | GATC | 4 cut(s) | 315, 460, 658, 784 |
| BstMBI | GATC | 4 cut(s) | 312, 457, 655, 781 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 462 |
| BstNI | CCWGG | 2 cut(s) | 629, 634 |
| BstPI | GGTNACC | 1 cut(s) | 544 |
| BstSCI | CCNGG | 2 cut(s) | 627, 632 |
| BstSFI | CTRYAG | 2 cut(s) | 115, 463 |
| BstUI | CGCG | 1 cut(s) | 456 |
| BstV1I | GCAGC | 4 cut(s) | 129, 463, 739, 761 |
| BstV2I | GAAGAC | 1 cut(s) | 212 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 233 |
| BsuRI | GGCC | 2 cut(s) | 310, 632 |
| BtgZI | GCGATG | 1 cut(s) | 204 |
| BtrI | CACGTC | 1 cut(s) | 447 |
| BtsCI | GGATG | 1 cut(s) | 280 |
| BtsIMutI | CAGTG | 1 cut(s) | 395 |
| BveI | ACCTGC | 3 cut(s) | 517, 532, 685 |
| Cac8I | GCNNGC | 1 cut(s) | 642 |
| CfoI | GCGC | 1 cut(s) | 456 |
| Cfr13I | GGNCC | 1 cut(s) | 308 |
| Csp6I | GTAC | 3 cut(s) | 49, 574, 716 |
| CviAII | CATG | 5 cut(s) | 11, 383, 403, 709, 728 |
| CviQI | GTAC | 3 cut(s) | 49, 574, 716 |
| DpnI | GATC | 4 cut(s) | 314, 459, 657, 783 |
| DpnII | GATC | 4 cut(s) | 312, 457, 655, 781 |
| EaeI | YGGCCR | 1 cut(s) | 630 |
| Eam1104I | CTCTTC | 1 cut(s) | 141 |
| EarI | CTCTTC | 1 cut(s) | 141 |
| Eco32I | GATATC | 1 cut(s) | 24 |
| Eco57I | CTGAAG | 2 cut(s) | 12, 29 |
| Eco91I | GGTNACC | 1 cut(s) | 544 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 553 |
| EcoO65I | GGTNACC | 1 cut(s) | 544 |
| EcoRI | GAATTC | 1 cut(s) | 67 |
| EcoRII | CCWGG | 2 cut(s) | 627, 632 |
| EcoRV | GATATC | 1 cut(s) | 24 |
| FaeI | CATG | 5 cut(s) | 14, 386, 406, 712, 731 |
| FaqI | GGGAC | 2 cut(s) | 344, 425 |
| FatI | CATG | 5 cut(s) | 10, 382, 402, 708, 727 |
| Fnu4HI | GCNGC | 4 cut(s) | 118, 452, 750, 753 |
| FokI | GGATG | 1 cut(s) | 267 |
| Fsp4HI | GCNGC | 4 cut(s) | 118, 452, 750, 753 |
| GlaI | GCGC | 1 cut(s) | 455 |
| GluI | GCNGC | 4 cut(s) | 118, 452, 750, 753 |
| GsaI | CCCAGC | 2 cut(s) | 168, 331 |
| GsuI | CTGGAG | 2 cut(s) | 255, 554 |
| HaeIII | GGCC | 2 cut(s) | 310, 632 |
| HapII | CCGG | 1 cut(s) | 692 |
| HhaI | GCGC | 1 cut(s) | 456 |
| Hin1II | CATG | 5 cut(s) | 14, 386, 406, 712, 731 |
| Hin6I | GCGC | 1 cut(s) | 454 |
| HinP1I | GCGC | 1 cut(s) | 454 |
| HindIII | AAGCTT | 2 cut(s) | 173, 638 |
| HinfI | GANTC | 4 cut(s) | 142, 565, 671, 791 |
| HpaII | CCGG | 1 cut(s) | 692 |
| HphI | GGTGA | 4 cut(s) | 29, 538, 541, 666 |
| Hpy166II | GTNNAC | 1 cut(s) | 359 |
| Hpy188I | TCNGA | 3 cut(s) | 141, 231, 786 |
| Hpy188III | TCNNGA | 7 cut(s) | 217, 344, 365, 442, 692, 767, 795 |
| Hpy8I | GTNNAC | 1 cut(s) | 359 |
| Hpy99I | CGWCG | 2 cut(s) | 188, 448 |
| HpyAV | CCTTC | 4 cut(s) | 44, 50, 87, 773 |
| HpyCH4III | ACNGT | 4 cut(s) | 19, 56, 154, 390 |
| HpyCH4IV | ACGT | 1 cut(s) | 446 |
| HpyCH4V | TGCA | 5 cut(s) | 117, 465, 644, 749, 755 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 462 |
| HpySE526I | ACGT | 1 cut(s) | 446 |
| Hsp92II | CATG | 5 cut(s) | 14, 386, 406, 712, 731 |
| HspAI | GCGC | 1 cut(s) | 454 |
| Kpn2I | TCCGGA | 1 cut(s) | 691 |
| Kzo9I | GATC | 4 cut(s) | 312, 457, 655, 781 |
| LguI | GCTCTTC | 1 cut(s) | 141 |
| LmnI | GCTCC | 1 cut(s) | 691 |
| Lsp1109I | GCAGC | 4 cut(s) | 129, 463, 739, 761 |
| LweI | GCATC | 1 cut(s) | 736 |
| MaeII | ACGT | 1 cut(s) | 446 |
| MaeIII | GTNAC | 3 cut(s) | 158, 412, 544 |
| MalI | GATC | 4 cut(s) | 314, 459, 657, 783 |
| MboI | GATC | 4 cut(s) | 312, 457, 655, 781 |
| MboII | GAAGA | 8 cut(s) | 18, 35, 128, 217, 286, 571, 574, 650 |
| MlsI | TGGCCA | 1 cut(s) | 632 |
| MluCI | AATT | 4 cut(s) | 67, 301, 598, 737 |
| MluNI | TGGCCA | 1 cut(s) | 632 |
| MmeI | TCCRAC | 1 cut(s) | 267 |
| MnlI | CCTC | 5 cut(s) | 92, 97, 268, 688, 699 |
| Mox20I | TGGCCA | 1 cut(s) | 632 |
| MroI | TCCGGA | 1 cut(s) | 691 |
| MroXI | GAANNNNTTC | 1 cut(s) | 617 |
| MscI | TGGCCA | 1 cut(s) | 632 |
| MslI | CAYNNNNRTG | 2 cut(s) | 215, 401 |
| Msp20I | TGGCCA | 1 cut(s) | 632 |
| MspA1I | CMGCKG | 2 cut(s) | 338, 752 |
| MspI | CCGG | 1 cut(s) | 692 |
| MspR9I | CCNGG | 2 cut(s) | 629, 634 |
| MvaI | CCWGG | 2 cut(s) | 629, 634 |
| MvnI | CGCG | 1 cut(s) | 456 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 462 |
| NdeII | GATC | 4 cut(s) | 312, 457, 655, 781 |
| NlaIII | CATG | 5 cut(s) | 14, 386, 406, 712, 731 |
| NlaIV | GGNNCC | 1 cut(s) | 16 |
| NmuCI | GTSAC | 1 cut(s) | 544 |
| NspV | TTCGAA | 1 cut(s) | 243 |
| OliI | CACNNNNGTG | 1 cut(s) | 215 |
| PaqCI | CACCTGC | 2 cut(s) | 517, 685 |
| PciSI | GCTCTTC | 1 cut(s) | 141 |
| PdmI | GAANNNNTTC | 1 cut(s) | 617 |
| PfeI | GAWTC | 4 cut(s) | 142, 565, 671, 791 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 266 |
| PkrI | GCNGC | 4 cut(s) | 119, 453, 751, 754 |
| Psp6I | CCWGG | 2 cut(s) | 627, 632 |
| PspEI | GGTNACC | 1 cut(s) | 544 |
| PspFI | CCCAGC | 2 cut(s) | 164, 327 |
| PspGI | CCWGG | 2 cut(s) | 627, 632 |
| PspN4I | GGNNCC | 1 cut(s) | 16 |
| PspPI | GGNCC | 1 cut(s) | 308 |
| PstI | CTGCAG | 2 cut(s) | 119, 467 |
| PvuII | CAGCTG | 2 cut(s) | 338, 752 |
| RsaI | GTAC | 3 cut(s) | 50, 575, 717 |
| RsaNI | GTAC | 3 cut(s) | 49, 574, 716 |
| RseI | CAYNNNNRTG | 2 cut(s) | 215, 401 |
| SapI | GCTCTTC | 1 cut(s) | 141 |
| SatI | GCNGC | 4 cut(s) | 118, 452, 750, 753 |
| Sau3AI | GATC | 4 cut(s) | 312, 457, 655, 781 |
| Sau96I | GGNCC | 1 cut(s) | 308 |
| ScaI | AGTACT | 2 cut(s) | 50, 575 |
| ScrFI | CCNGG | 2 cut(s) | 629, 634 |
| SfaNI | GCATC | 1 cut(s) | 736 |
| SfcI | CTRYAG | 2 cut(s) | 115, 463 |
| SfuI | TTCGAA | 1 cut(s) | 243 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 215, 401 |
| Sse9I | AATT | 4 cut(s) | 67, 301, 598, 737 |
| SsiI | CCGC | 2 cut(s) | 62, 498 |
| StyD4I | CCNGG | 2 cut(s) | 627, 632 |
| TaaI | ACNGT | 4 cut(s) | 19, 56, 154, 390 |
| TaiI | ACGT | 1 cut(s) | 449 |
| TaqI | TCGA | 2 cut(s) | 243, 364 |
| TasI | AATT | 4 cut(s) | 67, 301, 598, 737 |
| TatI | WGTACW | 3 cut(s) | 48, 573, 715 |
| TfiI | GAWTC | 4 cut(s) | 142, 565, 671, 791 |
| TscAI | CASTG | 1 cut(s) | 395 |
| TseFI | GTSAC | 1 cut(s) | 544 |
| TseI | GCWGC | 4 cut(s) | 117, 451, 749, 752 |
| Tsp45I | GTSAC | 1 cut(s) | 544 |
| TspDTI | ATGAA | 6 cut(s) | 269, 270, 371, 650, 689, 744 |
| TspGWI | ACGGA | 1 cut(s) | 273 |
| TspRI | CASTG | 1 cut(s) | 395 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 266 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 553 |
| XapI | RAATTY | 2 cut(s) | 67, 301 |
| XmnI | GAANNNNTTC | 1 cut(s) | 617 |
| ZrmI | AGTACT | 2 cut(s) | 50, 575 |