ribosome localization
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G20010 AT5G20020 |
| fragaria_vesca | FvH4_1g03920 FvH4_2g29671 |
| malus_domestica | MD02G1037500.v1.1 MD15G1120300.v1.1 MD15G1177700.v1.1 |
| prunus_persica | Prupe.1G473000_v2.0.a1 |
| pyrus_communis | pycom02g03070 pycom15g10830 pycom15g15910 |
| rosa_chinensis | RchiOBHm_Chr2g0089391 RchiOBHm_Chr6g0298641 |
| rosa_laevigata | RLG00000011497 RLG00000016023 |
| rosa_multiflora | Rmu_sc0000197.1_g000022 Rmu_sc0008099.1_g000010 Rmu_sc0023149.1_g000001 Rmu_sc0031564.1_g000001 Rmu_sc0034903.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00152000 Rroxscaffold_7G00169460 |
| rosa_rugosa | Rorug02G0000100 Rorug02G0000200 Rorug06G0281800 |
| rosa_samantha | Rh2AG045500 Rh2BG044000 Rh2CG045900 Rh2DG045400 Rh6AG393300 Rh6BG401100 Rh6CG407000 Rh6DG393700 |
| rosa_wichuraiana | Rw2G003710 Rw6G034390 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 388, 556 |
| Acc36I | ACCTGC | 3 cut(s) | 388, 403, 556 |
| AccB1I | GGYRCC | 1 cut(s) | 321 |
| AciI | CCGC | 1 cut(s) | 369 |
| AfaI | GTAC | 2 cut(s) | 446, 497 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 137, 177, 337, 426 |
| AgsI | TTSAA | 3 cut(s) | 43, 542, 602 |
| AluBI | AGCT | 4 cut(s) | 39, 46, 511, 598 |
| AluI | AGCT | 4 cut(s) | 39, 46, 511, 598 |
| Alw26I | GTCTC | 1 cut(s) | 231 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 277, 309 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 488 |
| AspLEI | GCGC | 1 cut(s) | 96 |
| AsuC2I | CCSGG | 1 cut(s) | 73 |
| AsuHPI | GGTGA | 2 cut(s) | 412, 537 |
| BanI | GGYRCC | 1 cut(s) | 321 |
| BbsI | GAAGAC | 1 cut(s) | 83 |
| BccI | CCATC | 1 cut(s) | 105 |
| BceAI | ACGGC | 1 cut(s) | 222 |
| BciVI | GTATCC | 1 cut(s) | 236 |
| BcnI | CCSGG | 1 cut(s) | 73 |
| BcoDI | GTCTC | 1 cut(s) | 231 |
| BfaI | CTAG | 1 cut(s) | 36 |
| BfoI | RGCGCY | 1 cut(s) | 97 |
| BfuAI | ACCTGC | 3 cut(s) | 388, 403, 556 |
| BfuI | GTATCC | 1 cut(s) | 236 |
| BmcAI | AGTACT | 1 cut(s) | 446 |
| Bme1390I | CCNGG | 1 cut(s) | 73 |
| BmiI | GGNNCC | 2 cut(s) | 70, 323 |
| BmrFI | CCNGG | 1 cut(s) | 73 |
| BpiI | GAAGAC | 1 cut(s) | 83 |
| BpmI | CTGGAG | 3 cut(s) | 126, 425, 546 |
| BpuMI | CCSGG | 1 cut(s) | 73 |
| BsaBI | GATNNNNATC | 1 cut(s) | 651 |
| BsaJI | CCNNGG | 1 cut(s) | 156 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 137, 177, 337, 426 |
| Bse1I | ACTGG | 2 cut(s) | 109, 442 |
| Bse8I | GATNNNNATC | 1 cut(s) | 651 |
| BseDI | CCNNGG | 1 cut(s) | 156 |
| BseGI | GGATG | 3 cut(s) | 151, 388, 532 |
| BseJI | GATNNNNATC | 1 cut(s) | 651 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 137, 177, 337, 426 |
| BseMII | CTCAG | 1 cut(s) | 247 |
| BseNI | ACTGG | 2 cut(s) | 109, 442 |
| BseRI | GAGGAG | 1 cut(s) | 549 |
| BseYI | CCCAGC | 1 cut(s) | 198 |
| BsgI | GTGCAG | 1 cut(s) | 355 |
| Bsh1285I | CGRYCG | 1 cut(s) | 138 |
| BshNI | GGYRCC | 1 cut(s) | 321 |
| BsiEI | CGRYCG | 1 cut(s) | 138 |
| BsiSI | CCGG | 1 cut(s) | 72 |
| BslFI | GGGAC | 2 cut(s) | 215, 296 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 137, 177, 337, 426 |
| BsmAI | GTCTC | 1 cut(s) | 231 |
| BsmBI | CGTCTC | 1 cut(s) | 231 |
| BsmFI | GGGAC | 2 cut(s) | 215, 296 |
| Bsp143I | GATC | 3 cut(s) | 135, 183, 652 |
| BspACI | CCGC | 1 cut(s) | 369 |
| BspCNI | CTCAG | 1 cut(s) | 246 |
| BspLI | GGNNCC | 2 cut(s) | 70, 323 |
| BspMI | ACCTGC | 3 cut(s) | 388, 403, 556 |
| BspQI | GCTCTTC | 1 cut(s) | 12 |
| BspT107I | GGYRCC | 1 cut(s) | 321 |
| BsrI | ACTGG | 2 cut(s) | 109, 442 |
| BssECI | CCNNGG | 1 cut(s) | 156 |
| BssMI | GATC | 3 cut(s) | 135, 183, 652 |
| BssT1I | CCWWGG | 1 cut(s) | 156 |
| Bst4CI | ACNGT | 3 cut(s) | 25, 261, 326 |
| Bst6I | CTCTTC | 2 cut(s) | 12, 597 |
| BstC8I | GCNNGC | 1 cut(s) | 513 |
| BstDEI | CTNAG | 1 cut(s) | 233 |
| BstEII | GGTNACC | 1 cut(s) | 415 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 424 |
| BstF5I | GGATG | 3 cut(s) | 151, 388, 532 |
| BstH2I | RGCGCY | 1 cut(s) | 97 |
| BstHHI | GCGC | 1 cut(s) | 96 |
| BstKTI | GATC | 3 cut(s) | 138, 186, 655 |
| BstMAI | GTCTC | 1 cut(s) | 231 |
| BstMBI | GATC | 3 cut(s) | 135, 183, 652 |
| BstMCI | CGRYCG | 1 cut(s) | 138 |
| BstPI | GGTNACC | 1 cut(s) | 415 |
| BstSCI | CCNGG | 1 cut(s) | 71 |
| BstV2I | GAAGAC | 1 cut(s) | 83 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 104 |
| BsuI | GTATCC | 1 cut(s) | 236 |
| BtsCI | GGATG | 3 cut(s) | 151, 388, 532 |
| BtsIMutI | CAGTG | 1 cut(s) | 266 |
| BveI | ACCTGC | 3 cut(s) | 388, 403, 556 |
| Cac8I | GCNNGC | 1 cut(s) | 513 |
| CfoI | GCGC | 1 cut(s) | 96 |
| Csp6I | GTAC | 2 cut(s) | 445, 496 |
| CviAII | CATG | 3 cut(s) | 254, 274, 318 |
| CviJI | RGCY | 8 cut(s) | 5, 19, 39, 46, 209, 511, 584, 598 |
| CviKI_1 | RGCY | 8 cut(s) | 5, 19, 39, 46, 209, 511, 584, 598 |
| CviQI | GTAC | 2 cut(s) | 445, 496 |
| DdeI | CTNAG | 1 cut(s) | 233 |
| DpnI | GATC | 3 cut(s) | 137, 185, 654 |
| DpnII | GATC | 3 cut(s) | 135, 183, 652 |
| Eam1104I | CTCTTC | 2 cut(s) | 12, 597 |
| EarI | CTCTTC | 2 cut(s) | 12, 597 |
| Eco130I | CCWWGG | 1 cut(s) | 156 |
| Eco91I | GGTNACC | 1 cut(s) | 415 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 424 |
| EcoO65I | GGTNACC | 1 cut(s) | 415 |
| EcoT14I | CCWWGG | 1 cut(s) | 156 |
| ErhI | CCWWGG | 1 cut(s) | 156 |
| Esp3I | CGTCTC | 1 cut(s) | 231 |
| FaeI | CATG | 3 cut(s) | 257, 277, 321 |
| FaqI | GGGAC | 2 cut(s) | 215, 296 |
| FatI | CATG | 3 cut(s) | 253, 273, 317 |
| FokI | GGATG | 3 cut(s) | 138, 395, 539 |
| FspBI | CTAG | 1 cut(s) | 36 |
| GlaI | GCGC | 1 cut(s) | 95 |
| GsaI | CCCAGC | 1 cut(s) | 202 |
| GsuI | CTGGAG | 3 cut(s) | 126, 425, 546 |
| HaeII | RGCGCY | 1 cut(s) | 97 |
| HapII | CCGG | 1 cut(s) | 72 |
| HhaI | GCGC | 1 cut(s) | 96 |
| Hin1II | CATG | 3 cut(s) | 257, 277, 321 |
| Hin6I | GCGC | 1 cut(s) | 94 |
| HinP1I | GCGC | 1 cut(s) | 94 |
| HindIII | AAGCTT | 2 cut(s) | 509, 596 |
| HinfI | GANTC | 4 cut(s) | 13, 189, 231, 542 |
| HpaII | CCGG | 1 cut(s) | 72 |
| HphI | GGTGA | 2 cut(s) | 412, 537 |
| Hpy166II | GTNNAC | 1 cut(s) | 230 |
| Hpy188I | TCNGA | 5 cut(s) | 12, 102, 188, 236, 357 |
| Hpy188III | TCNNGA | 5 cut(s) | 115, 215, 313, 563, 638 |
| Hpy8I | GTNNAC | 1 cut(s) | 230 |
| Hpy99I | CGWCG | 3 cut(s) | 59, 65, 136 |
| HpyCH4III | ACNGT | 3 cut(s) | 25, 261, 326 |
| HpyCH4V | TGCA | 2 cut(s) | 336, 515 |
| HpyF3I | CTNAG | 1 cut(s) | 233 |
| Hsp92II | CATG | 3 cut(s) | 257, 277, 321 |
| HspAI | GCGC | 1 cut(s) | 94 |
| Kzo9I | GATC | 3 cut(s) | 135, 183, 652 |
| LguI | GCTCTTC | 1 cut(s) | 12 |
| LmnI | GCTCC | 1 cut(s) | 562 |
| MaeI | CTAG | 1 cut(s) | 36 |
| MaeIII | GTNAC | 3 cut(s) | 283, 326, 415 |
| MalI | GATC | 3 cut(s) | 137, 185, 654 |
| MboI | GATC | 3 cut(s) | 135, 183, 652 |
| MboII | GAAGA | 5 cut(s) | 88, 130, 193, 442, 614 |
| MluCI | AATT | 2 cut(s) | 469, 608 |
| MlyI | GAGTC | 1 cut(s) | 225 |
| MnlI | CCTC | 4 cut(s) | 59, 559, 570, 598 |
| MroXI | GAANNNNTTC | 1 cut(s) | 488 |
| MseI | TTAA | 1 cut(s) | 621 |
| MslI | CAYNNNNRTG | 2 cut(s) | 272, 576 |
| MspI | CCGG | 1 cut(s) | 72 |
| MspR9I | CCNGG | 1 cut(s) | 73 |
| NciI | CCSGG | 1 cut(s) | 73 |
| NdeII | GATC | 3 cut(s) | 135, 183, 652 |
| NlaIII | CATG | 3 cut(s) | 257, 277, 321 |
| NlaIV | GGNNCC | 2 cut(s) | 70, 323 |
| NmuCI | GTSAC | 2 cut(s) | 283, 326 |
| PaqCI | CACCTGC | 2 cut(s) | 388, 556 |
| PciSI | GCTCTTC | 1 cut(s) | 12 |
| PdmI | GAANNNNTTC | 1 cut(s) | 488 |
| PfeI | GAWTC | 3 cut(s) | 13, 189, 542 |
| Ple19I | CGATCG | 1 cut(s) | 138 |
| PleI | GAGTC | 1 cut(s) | 225 |
| PpsI | GAGTC | 1 cut(s) | 225 |
| PspEI | GGTNACC | 1 cut(s) | 415 |
| PspFI | CCCAGC | 1 cut(s) | 198 |
| PspN4I | GGNNCC | 2 cut(s) | 70, 323 |
| PvuI | CGATCG | 1 cut(s) | 138 |
| RsaI | GTAC | 2 cut(s) | 446, 497 |
| RsaNI | GTAC | 2 cut(s) | 445, 496 |
| RseI | CAYNNNNRTG | 2 cut(s) | 272, 576 |
| SapI | GCTCTTC | 1 cut(s) | 12 |
| SaqAI | TTAA | 1 cut(s) | 621 |
| Sau3AI | GATC | 3 cut(s) | 135, 183, 652 |
| ScaI | AGTACT | 1 cut(s) | 446 |
| SchI | GAGTC | 1 cut(s) | 225 |
| ScrFI | CCNGG | 1 cut(s) | 73 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 272, 576 |
| Sse9I | AATT | 2 cut(s) | 469, 608 |
| SsiI | CCGC | 1 cut(s) | 369 |
| SspMI | CTAG | 1 cut(s) | 36 |
| StyD4I | CCNGG | 1 cut(s) | 71 |
| StyI | CCWWGG | 1 cut(s) | 156 |
| TaaI | ACNGT | 3 cut(s) | 25, 261, 326 |
| TaqI | TCGA | 3 cut(s) | 114, 144, 660 |
| TasI | AATT | 2 cut(s) | 469, 608 |
| TatI | WGTACW | 1 cut(s) | 444 |
| TfiI | GAWTC | 3 cut(s) | 13, 189, 542 |
| Tru1I | TTAA | 1 cut(s) | 621 |
| Tru9I | TTAA | 1 cut(s) | 621 |
| TscAI | CASTG | 1 cut(s) | 266 |
| TseFI | GTSAC | 2 cut(s) | 283, 326 |
| Tsp45I | GTSAC | 2 cut(s) | 283, 326 |
| TspDTI | ATGAA | 5 cut(s) | 140, 242, 413, 465, 560 |
| TspGWI | ACGGA | 2 cut(s) | 78, 255 |
| TspRI | CASTG | 1 cut(s) | 266 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 424 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 173 |
| XmnI | GAANNNNTTC | 1 cut(s) | 488 |
| XspI | CTAG | 1 cut(s) | 36 |
| ZrmI | AGTACT | 1 cut(s) | 446 |