pycom15g23630

Belongs to the NPH3 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0006338
Physical Location & Seq
Reverse (-)
17777698 .. 17780074
2377 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2028 bp
ATGGCTGCAGCAACGGCGGCGGCGGCGGCGGCATCTGAGAAATCAAGCTCCAAGGGCCAAGCATGGTTCTGCACCACTGGATTGCCAAGCGACATTGTCGTCCGAGTCGACGACATGACCTTCCATCTCCATAAGTTCCCTCTCATGTCGAAAAGTCGAAAGCTTCATAACCTAATCACAGAGGAAGAGACGAACCCATCAAACCCCCATCACCAAATGGACGACGACGACGACGAAATCGAACAAGTCCAGTGCCAAATATCCCTCTCTGACTTCCCCGGCGGCTCCGAGACCTTCGAGATCGCCGCCAAGTTCTGCTACGGAGTCAAGATCGACCTGAGCTCCTCCAACGTCGTGCCGTTGCGCTGCGCCGGGGAGTATTTGGATATGACGGAGGAGTACTCGGACGACAACCTCATTTCGAAGACCGAGAGGTTTCTCTCTCAGTCGGTGTTGAAAAGCTTTAAGGAGTCGCTCAGAGCTCTCAAGTCCTGCGAGCGAGTCATGCCTCTGGCGGAGAATTTGGGGATTACGCAGAGGTGCATAGACTCCGTCGCCTCCCGCGCCACGTCTGCCGATCCCTCCCTGTTTGGCTGGCCGGTTAGCAACGGTGGACCCAATCGGAATGCAAATGCGGATGCGGTTTCGGCTTCTTCTGCTTCAAAACAGCAGATTTTGTGGAATGGGATTGACGCCGGCGGCGGACGGAGAAGGACTAAACACGCCGATTCCTGGCTTGAAGACTTGGTGGTTTTGAGCTTGCCACTTTTCAAGCGGTTAATTTCCGCCATGAAATCTGGAGATCTGAGCTTGGAGATGGTGGAGACGTGCTTGATGCAGTACGCTAAGAAGTACATTCCTGGAATTTCAAGAACGAATAGAAAGCCTTCGTCTTCTACCTCCGCCGCCGCCGCCACTACTGCCGCCGAATCGTCGCGTTTAGCTTCGGAGAGTCAGCAGAGAGAGCTTTTGGAGACGATCATCTCCAATCTTCCATTGGAGAAGAGCTCCAGACCTTCGACGGCGACTCGATTCCTCTTCGGACTATTGCGAACCGCCAACATACTTAACGCCTCCGAAGCCTGCAAGGCCGCCTTGGAGAAGAAGATTGCCTCGCAGCTCCACCAAGCCACCTTAGACGACCTCCTCATCCCGAGCTACTCCTACCTGAACGAGACGCTCTACGACGTCGATTGCATCGAGAGAATCCTCGGTTACTTCTTGAACGGCTTGGATCAGGGAAATACCGCCAGCATCGAAGACGGTTCTGACGGCTCCGTCCGATCGCCGTCGCTGATGCTCGTCGGGAAATTGATAGATGAATTCCTTTCCGAGATCGCCTCCGATGCGAATCTTAAACCGGATCGGTTCTACAACCTCGCGATTTCTCTTCCTGATCAAGCTCGGCTCTTCGACGACGGCCTTTACAGAGCCGTCGATGTCTATCTCAAGGCGCATCCATGGCTATCGGAACCTGAGCGCGAGAAGGTCTGCGGAATTCTGGACTGCCAGAAGCTGACGCTTGAGGCGTGCACGCATGCGGCGCAGAACGAGCGATTGCCGCTGCGAGCGGTGGTGCAGGTTCTGTTTTTCGAGCAGCTCCAGCTCCGCCACGCCATCACCGGAACTCTTCATGCCGCCGACGTCGTTCCCCCGGAATCGTCCAGGCCATCGGTGCTGCGACGCGAAAGGGATGACGAGGAGGAGGAAGAGGGCGACGCGGCGGAGGCACGCAGGGATGAAAGTGGAGGCACGTGGCAGGCGGCGGTGAGGCAGAATCAGGTGTTGCGATTGGACATGGATAGCATGAGGACGCGGGTGCACCAGTTGGAGCGGGAATGCTCCAGCATGAAGAAAGTGATCGAGAAAATTGATAAGCCGGGCCAACCCGGAAGAGACGAGTCGGGTCGGAAGGACTCGTTGATCCGGAGGTTCGGGTGCAAGTTCAAGACCCAGGTGTGCGATTCGCACGAACGGACGGTCGTTGATACGAGAAAAGGACGACGGCGACACCATCACCAACAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BTB NPH3

Protein Analysis

676

Amino Acids

74.93

Weight (kDa)

5.77

Isoelectric Point (pI)

50.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NPH3 PF03000 243 - 511 3.5e-89 NPH3 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 98, 1277
AatII GACGTC 2 cut(s) 1191, 1647
Acc36I ACCTGC 1 cut(s) 1570
AccBSI CCGCTC 2 cut(s) 1571, 1834
AccI GTMKAC 1 cut(s) 108
AccII CGCG 7 cut(s) 564, 937, 1382, 1482, 1686, 1721, 1816
AccIII TCCGGA 1 cut(s) 1926
AclWI GGATC 4 cut(s) 572, 1242, 1371, 1918
AcoI YGGCCR 1 cut(s) 596
AcsI RAATTY 4 cut(s) 520, 864, 1322, 1497
AcvI CACGTG 1 cut(s) 1755
AcyI GRCGYC 3 cut(s) 693, 1188, 1644
AfaI GTAC 3 cut(s) 401, 842, 854
AfiI CCNNNNNNNGG 1 cut(s) 732
AgsI TTSAA 7 cut(s) 457, 663, 740, 772, 870, 1225, 1948
AjiI CACGTC 2 cut(s) 570, 828
AjnI CCWGG 4 cut(s) 731, 859, 1664, 1953
Alw21I GWGCWC 5 cut(s) 344, 484, 1010, 1535, 1824
Alw26I GTCTC 6 cut(s) 182, 284, 818, 968, 1169, 1890
Alw44I GTGCAC 2 cut(s) 1531, 1820
AlwI GGATC 4 cut(s) 572, 1242, 1371, 1918
AlwNI CAGNNNCTG 2 cut(s) 1516, 1585
Ama87I CYCGRG 1 cut(s) 1153
Aor13HI TCCGGA 1 cut(s) 1926
AoxI GGCC 6 cut(s) 55, 596, 1089, 1420, 1667, 1882
ApaLI GTGCAC 2 cut(s) 1531, 1820
ApeKI GCWGC 7 cut(s) 5, 8, 366, 1117, 1564, 1597, 1678
ApoI RAATTY 4 cut(s) 520, 864, 1322, 1497
ArsI GACNNNNNNTTYG 2 cut(s) 1965, 1997
Asp700I GAANNNNTTC 1 cut(s) 886
AspLEI GCGC 6 cut(s) 366, 371, 566, 1456, 1482, 1546
AspS9I GGNCC 3 cut(s) 55, 614, 1882
AsuC2I CCSGG 5 cut(s) 279, 373, 1655, 1881, 1890
AsuHPI GGTGA 4 cut(s) 203, 1612, 1780, 2009
AsuII TTCGAA 1 cut(s) 422
AvaI CYCGRG 1 cut(s) 1153
AvaII GGWCC 1 cut(s) 614
BaeGI GKGCMC 2 cut(s) 1535, 1824
BanII GRGCYC 3 cut(s) 344, 484, 1010
BbrPI CACGTG 1 cut(s) 1755
BbsI GAAGAC 4 cut(s) 431, 747, 885, 1266
Bbv12I GWGCWC 5 cut(s) 344, 484, 1010, 1535, 1824
BbvI GCAGC 6 cut(s) 20, 353, 1129, 1551, 1609, 1665
BccI CCATC 7 cut(s) 132, 205, 216, 811, 1625, 1678, 2022
BceAI ACGGC 9 cut(s) 30, 343, 1038, 1243, 1273, 1288, 1418, 1435, 2021
BciT130I CCWGG 4 cut(s) 733, 861, 1666, 1955
BclI TGATCA 1 cut(s) 1396
BcnI CCSGG 5 cut(s) 279, 373, 1655, 1881, 1890
BcoDI GTCTC 6 cut(s) 182, 284, 818, 968, 1169, 1890
BfmI CTRYAG 1 cut(s) 6
BfuAI ACCTGC 1 cut(s) 1570
BglI GCCNNNNNGGC 1 cut(s) 1088
BglII AGATCT 1 cut(s) 802
BmcAI AGTACT 1 cut(s) 401
Bme1390I CCNGG 9 cut(s) 279, 373, 733, 861, 1655, 1666, 1881, 1890, 1955
Bme18I GGWCC 1 cut(s) 614
BmeT110I CYCGRG 1 cut(s) 1153
BmgBI CACGTC 2 cut(s) 570, 828
BmgT120I GGNCC 3 cut(s) 55, 614, 1882
BmiI GGNNCC 4 cut(s) 286, 616, 1276, 1473
BmrFI CCNGG 9 cut(s) 279, 373, 733, 861, 1655, 1666, 1881, 1890, 1955
BmsI GCATC 8 cut(s) 41, 628, 825, 1206, 1263, 1287, 1336, 1465
BpiI GAAGAC 4 cut(s) 431, 747, 885, 1266
BplI GAGNNNNNCTC 6 cut(s) 386, 418, 992, 1024, 1325, 1357
BpmI CTGGAG 4 cut(s) 819, 994, 1586, 1828
Bpu10I CCTNAGC 2 cut(s) 338, 1476
Bpu14I TTCGAA 1 cut(s) 422
BpuEI CTTGAG 3 cut(s) 470, 1433, 1544
BpuMI CCSGG 5 cut(s) 279, 373, 1655, 1881, 1890
BsaAI YACGTR 1 cut(s) 1755
BsaBI GATNNNNATC 2 cut(s) 1350, 1443
BsaHI GRCGYC 3 cut(s) 693, 1188, 1644
BsaI GGTCTC 1 cut(s) 284
BsaJI CCNNGG 8 cut(s) 51, 277, 372, 1095, 1210, 1460, 1653, 1953
BsaWI WCCGGW 3 cut(s) 1360, 1622, 1926
BsaXI ACNNNNNCTCC 2 cut(s) 326, 356
Bsc4I CCNNNNNNNGG 1 cut(s) 732
Bse118I RCCGGY 2 cut(s) 598, 695
Bse1I ACTGG 3 cut(s) 82, 250, 1825
Bse8I GATNNNNATC 2 cut(s) 1350, 1443
BseAI TCCGGA 1 cut(s) 1926
BseBI CCWGG 4 cut(s) 733, 861, 1666, 1955
BseDI CCNNGG 8 cut(s) 51, 277, 372, 1095, 1210, 1460, 1653, 1953
BseGI GGATG 5 cut(s) 643, 1149, 1456, 1699, 1744
BseJI GATNNNNATC 2 cut(s) 1350, 1443
BseLI CCNNNNNNNGG 1 cut(s) 732
BseMII CTCAG 6 cut(s) 27, 329, 458, 490, 797, 1467
BseNI ACTGG 3 cut(s) 82, 250, 1825
BseRI GAGGAG 5 cut(s) 334, 410, 1136, 1715, 1718
BseSI GKGCMC 2 cut(s) 1535, 1824
BseXI GCAGC 6 cut(s) 20, 353, 1129, 1551, 1609, 1665
BsgI GTGCAG 2 cut(s) 55, 1598
Bsh1236I CGCG 7 cut(s) 564, 937, 1382, 1482, 1686, 1721, 1816
Bsh1285I CGRYCG 2 cut(s) 1286, 1983
BshFI GGCC 6 cut(s) 57, 598, 1091, 1422, 1669, 1884
BsiEI CGRYCG 2 cut(s) 1286, 1983
BsiHKAI GWGCWC 5 cut(s) 344, 484, 1010, 1535, 1824
BsiHKCI CYCGRG 1 cut(s) 1153
BslI CCNNNNNNNGG 1 cut(s) 732
BsmAI GTCTC 6 cut(s) 182, 284, 818, 968, 1169, 1890
BsmBI CGTCTC 5 cut(s) 182, 818, 968, 1169, 1890
BsmI GAATGC 2 cut(s) 631, 1844
BsnI GGCC 6 cut(s) 57, 598, 1091, 1422, 1669, 1884
Bso31I GGTCTC 1 cut(s) 284
BsoBI CYCGRG 1 cut(s) 1153
Bsp119I TTCGAA 1 cut(s) 422
Bsp1286I GDGCHC 5 cut(s) 344, 484, 1010, 1535, 1824
Bsp13I TCCGGA 1 cut(s) 1926
Bsp19I CCATGG 1 cut(s) 1460
Bsp68I TCGCGA 1 cut(s) 1382
BspANI GGCC 6 cut(s) 57, 598, 1091, 1422, 1669, 1884
BspCNI CTCAG 6 cut(s) 28, 330, 457, 489, 798, 1468
BspEI TCCGGA 1 cut(s) 1926
BspFNI CGCG 7 cut(s) 564, 937, 1382, 1482, 1686, 1721, 1816
BspLI GGNNCC 4 cut(s) 286, 616, 1276, 1473
BspMAI CTGCAG 1 cut(s) 10
BspMI ACCTGC 1 cut(s) 1570
BspPI GGATC 4 cut(s) 572, 1242, 1371, 1918
BspQI GCTCTTC 2 cut(s) 998, 1415
BspT104I TTCGAA 1 cut(s) 422
BspTNI GGTCTC 1 cut(s) 284
BsrBI CCGCTC 2 cut(s) 1571, 1834
BsrFI RCCGGY 2 cut(s) 598, 695
BsrI ACTGG 3 cut(s) 82, 250, 1825
BssAI RCCGGY 2 cut(s) 598, 695
BssECI CCNNGG 8 cut(s) 51, 277, 372, 1095, 1210, 1460, 1653, 1953
BssNI GRCGYC 3 cut(s) 693, 1188, 1644
BssT1I CCWWGG 3 cut(s) 51, 1095, 1460
Bst2UI CCWGG 4 cut(s) 733, 861, 1666, 1955
Bst4CI ACNGT 4 cut(s) 611, 1265, 1981, 2025
Bst6I CTCTTC 8 cut(s) 180, 998, 1043, 1395, 1415, 1635, 1704, 1888
BstACI GRCGYC 3 cut(s) 693, 1188, 1644
BstBAI YACGTR 1 cut(s) 1755
BstBI TTCGAA 1 cut(s) 422
BstDEI CTNAG 8 cut(s) 36, 338, 444, 476, 806, 846, 1135, 1476
BstDSI CCRYGG 1 cut(s) 1460
BstF5I GGATG 5 cut(s) 643, 1149, 1456, 1699, 1744
BstFNI CGCG 7 cut(s) 564, 937, 1382, 1482, 1686, 1721, 1816
BstHHI GCGC 6 cut(s) 366, 371, 566, 1456, 1482, 1546
BstMAI GTCTC 6 cut(s) 182, 284, 818, 968, 1169, 1890
BstMCI CGRYCG 2 cut(s) 1286, 1983
BstNI CCWGG 4 cut(s) 733, 861, 1666, 1955
BstNSI RCATGY 1 cut(s) 1541
BstSCI CCNGG 9 cut(s) 277, 371, 731, 859, 1653, 1664, 1879, 1888, 1953
BstSFI CTRYAG 1 cut(s) 6
BstSLI GKGCMC 2 cut(s) 1535, 1824
BstUI CGCG 7 cut(s) 564, 937, 1382, 1482, 1686, 1721, 1816
BstV1I GCAGC 6 cut(s) 20, 353, 1129, 1551, 1609, 1665
BstV2I GAAGAC 4 cut(s) 431, 747, 885, 1266
BstX2I RGATCY 1 cut(s) 802
BstYI RGATCY 1 cut(s) 802
BsuRI GGCC 6 cut(s) 57, 598, 1091, 1422, 1669, 1884
BtgI CCRYGG 1 cut(s) 1460
BtrI CACGTC 2 cut(s) 570, 828
BtsCI GGATG 5 cut(s) 643, 1149, 1456, 1699, 1744
BtsIMutI CAGTG 2 cut(s) 75, 257
BtuMI TCGCGA 1 cut(s) 1382
BveI ACCTGC 1 cut(s) 1570
CaiI CAGNNNCTG 2 cut(s) 1516, 1585
CfoI GCGC 6 cut(s) 366, 371, 566, 1456, 1482, 1546
Cfr10I RCCGGY 2 cut(s) 598, 695
Cfr13I GGNCC 3 cut(s) 55, 614, 1882
CseI GACGC 6 cut(s) 701, 1186, 1528, 1692, 1727, 1822
Csp6I GTAC 3 cut(s) 400, 841, 853
CviQI GTAC 3 cut(s) 400, 841, 853
DdeI CTNAG 8 cut(s) 36, 338, 444, 476, 806, 846, 1135, 1476
DrdI GACNNNNNNGTC 2 cut(s) 98, 1277
DseDI GACNNNNNNGTC 2 cut(s) 98, 1277
EaeI YGGCCR 1 cut(s) 596
Eam1104I CTCTTC 8 cut(s) 180, 998, 1043, 1395, 1415, 1635, 1704, 1888
EarI CTCTTC 8 cut(s) 180, 998, 1043, 1395, 1415, 1635, 1704, 1888
EciI GGCGGA 6 cut(s) 530, 717, 775, 892, 1598, 1739
Ecl136II GAGCTC 3 cut(s) 342, 482, 1008
Eco130I CCWWGG 3 cut(s) 51, 1095, 1460
Eco24I GRGCYC 3 cut(s) 344, 484, 1010
Eco31I GGTCTC 1 cut(s) 284
Eco47I GGWCC 1 cut(s) 614
Eco53kI GAGCTC 3 cut(s) 342, 482, 1008
Eco72I CACGTG 1 cut(s) 1755
Eco88I CYCGRG 1 cut(s) 1153
EcoICRI GAGCTC 3 cut(s) 342, 482, 1008
EcoRI GAATTC 2 cut(s) 1322, 1497
EcoRII CCWGG 4 cut(s) 731, 859, 1664, 1953
EcoT14I CCWWGG 3 cut(s) 51, 1095, 1460
EcoT38I GRGCYC 3 cut(s) 344, 484, 1010
ErhI CCWWGG 3 cut(s) 51, 1095, 1460
Esp3I CGTCTC 5 cut(s) 182, 818, 968, 1169, 1890
FalI AAGNNNNNCTT 2 cut(s) 1079, 1111
FauI CCCGC 3 cut(s) 569, 1809, 1827
FbaI TGATCA 1 cut(s) 1396
FblI GTMKAC 1 cut(s) 108
FokI GGATG 5 cut(s) 650, 1136, 1443, 1706, 1751
FriOI GRGCYC 3 cut(s) 344, 484, 1010
GlaI GCGC 6 cut(s) 365, 370, 565, 1455, 1481, 1545
GsuI CTGGAG 4 cut(s) 819, 994, 1586, 1828
HaeIII GGCC 6 cut(s) 57, 598, 1091, 1422, 1669, 1884
HgaI GACGC 6 cut(s) 701, 1186, 1528, 1692, 1727, 1822
HhaI GCGC 6 cut(s) 366, 371, 566, 1456, 1482, 1546
Hin1I GRCGYC 3 cut(s) 693, 1188, 1644
Hin6I GCGC 6 cut(s) 364, 369, 564, 1454, 1480, 1544
HinP1I GCGC 6 cut(s) 364, 369, 564, 1454, 1480, 1544
HincII GTYRAC 1 cut(s) 109
HindII GTYRAC 1 cut(s) 109
HindIII AAGCTT 2 cut(s) 161, 460
HphI GGTGA 4 cut(s) 203, 1612, 1780, 2009
Hpy166II GTNNAC 4 cut(s) 109, 614, 1533, 1822
Hpy8I GTNNAC 4 cut(s) 109, 614, 1533, 1822
HpyAV CCTTC 7 cut(s) 130, 304, 705, 897, 1026, 1480, 1906
HpyCH4III ACNGT 4 cut(s) 611, 1265, 1981, 2025
HpyCH4IV ACGT 6 cut(s) 351, 569, 827, 1188, 1644, 1754
HpyF3I CTNAG 8 cut(s) 36, 338, 444, 476, 806, 846, 1135, 1476
HpySE526I ACGT 6 cut(s) 351, 569, 827, 1188, 1644, 1754
Hsp92I GRCGYC 3 cut(s) 693, 1188, 1644
HspAI GCGC 6 cut(s) 364, 369, 564, 1454, 1480, 1544
Kpn2I TCCGGA 1 cut(s) 1926
KroI GCCGGC 1 cut(s) 695
KroNI GCCGGC 1 cut(s) 697
Ksp22I TGATCA 1 cut(s) 1396
LguI GCTCTTC 2 cut(s) 998, 1415
Lsp1109I GCAGC 6 cut(s) 20, 353, 1129, 1551, 1609, 1665
LweI GCATC 8 cut(s) 41, 628, 825, 1206, 1263, 1287, 1336, 1465
MaeII ACGT 6 cut(s) 351, 569, 827, 1188, 1644, 1754
MaeIII GTNAC 1 cut(s) 1214
MbiI CCGCTC 2 cut(s) 1571, 1834
MflI RGATCY 1 cut(s) 802
MhlI GDGCHC 5 cut(s) 344, 484, 1010, 1535, 1824
MluCI AATT 7 cut(s) 520, 780, 864, 1310, 1322, 1497, 1869
MlyI GAGTC 9 cut(s) 114, 333, 479, 510, 542, 961, 1021, 1910, 1910
MmeI TCCRAC 3 cut(s) 372, 1809, 1889
MreI CGCCGGCG 1 cut(s) 695
MroI TCCGGA 1 cut(s) 1926
MroNI GCCGGC 1 cut(s) 695
MroXI GAANNNNTTC 1 cut(s) 886
MseI TTAA 4 cut(s) 465, 779, 1068, 1356
MspA1I CMGCKG 1 cut(s) 1564
MspR9I CCNGG 9 cut(s) 279, 373, 733, 861, 1655, 1666, 1881, 1890, 1955
MteI GCGCNGCGC 1 cut(s) 367
Mva1269I GAATGC 2 cut(s) 631, 1844
MvaI CCWGG 4 cut(s) 733, 861, 1666, 1955
MvnI CGCG 7 cut(s) 564, 937, 1382, 1482, 1686, 1721, 1816
NaeI GCCGGC 1 cut(s) 697
NciI CCSGG 5 cut(s) 279, 373, 1655, 1881, 1890
NcoI CCATGG 1 cut(s) 1460
NgoMIV GCCGGC 1 cut(s) 695
NlaIV GGNNCC 4 cut(s) 286, 616, 1276, 1473
NmeAIII GCCGAG 1 cut(s) 1384
NruI TCGCGA 1 cut(s) 1382
NspI RCATGY 1 cut(s) 1541
NspV TTCGAA 1 cut(s) 422
PaeI GCATGC 1 cut(s) 1541
PciSI GCTCTTC 2 cut(s) 998, 1415
PcsI WCGNNNNNNNCGW 6 cut(s) 105, 228, 231, 237, 1197, 1526
PctI GAATGC 2 cut(s) 631, 1844
PdiI GCCGGC 1 cut(s) 697
PdmI GAANNNNTTC 1 cut(s) 886
PfeI GAWTC 8 cut(s) 728, 929, 1032, 1206, 1351, 1658, 1777, 1964
PflFI GACNNNGTC 2 cut(s) 95, 551
PfoI TCCNGGA 1 cut(s) 859
Ple19I CGATCG 1 cut(s) 1286
PleI GAGTC 9 cut(s) 113, 332, 478, 509, 542, 960, 1021, 1909, 1910
PmaCI CACGTG 1 cut(s) 1755
PmlI CACGTG 1 cut(s) 1755
PpsI GAGTC 9 cut(s) 113, 332, 478, 509, 542, 960, 1021, 1909, 1910
Ppu21I YACGTR 1 cut(s) 1755
Psp124BI GAGCTC 3 cut(s) 344, 484, 1010
Psp6I CCWGG 4 cut(s) 731, 859, 1664, 1953
PspCI CACGTG 1 cut(s) 1755
PspGI CCWGG 4 cut(s) 731, 859, 1664, 1953
PspN4I GGNNCC 4 cut(s) 286, 616, 1276, 1473
PspPI GGNCC 3 cut(s) 55, 614, 1882
PstI CTGCAG 1 cut(s) 10
PstNI CAGNNNCTG 2 cut(s) 1516, 1585
PsuI RGATCY 1 cut(s) 802
PsyI GACNNNGTC 2 cut(s) 95, 551
PvuI CGATCG 1 cut(s) 1286
RruI TCGCGA 1 cut(s) 1382
RsaI GTAC 3 cut(s) 401, 842, 854
RsaNI GTAC 3 cut(s) 400, 841, 853
SacI GAGCTC 3 cut(s) 344, 484, 1010
SalI GTCGAC 1 cut(s) 107
SapI GCTCTTC 2 cut(s) 998, 1415
SaqAI TTAA 4 cut(s) 465, 779, 1068, 1356
Sau96I GGNCC 3 cut(s) 55, 614, 1882
ScaI AGTACT 1 cut(s) 401
SchI GAGTC 9 cut(s) 114, 333, 479, 510, 542, 961, 1021, 1910, 1910
ScrFI CCNGG 9 cut(s) 279, 373, 733, 861, 1655, 1666, 1881, 1890, 1955
SduI GDGCHC 5 cut(s) 344, 484, 1010, 1535, 1824
SfaNI GCATC 8 cut(s) 41, 628, 825, 1206, 1263, 1287, 1336, 1465
SfcI CTRYAG 1 cut(s) 6
SfuI TTCGAA 1 cut(s) 422
SgrAI CRCCGGYG 1 cut(s) 695
SinI GGWCC 1 cut(s) 614
SmlI CTYRAG 3 cut(s) 485, 1448, 1523
SmoI CTYRAG 3 cut(s) 485, 1448, 1523
SphI GCATGC 1 cut(s) 1541
Sse9I AATT 7 cut(s) 520, 780, 864, 1310, 1322, 1497, 1869
SstI GAGCTC 3 cut(s) 344, 484, 1010
StyD4I CCNGG 9 cut(s) 277, 371, 731, 859, 1653, 1664, 1879, 1888, 1953
StyI CCWWGG 3 cut(s) 51, 1095, 1460
TaaI ACNGT 4 cut(s) 611, 1265, 1981, 2025
TaiI ACGT 6 cut(s) 354, 572, 830, 1191, 1647, 1757
TaqII GACCGA 1 cut(s) 443
TasI AATT 7 cut(s) 520, 780, 864, 1310, 1322, 1497, 1869
TatI WGTACW 2 cut(s) 399, 852
TfiI GAWTC 8 cut(s) 728, 929, 1032, 1206, 1351, 1658, 1777, 1964
Tru1I TTAA 4 cut(s) 465, 779, 1068, 1356
Tru9I TTAA 4 cut(s) 465, 779, 1068, 1356
TscAI CASTG 2 cut(s) 82, 257
TseI GCWGC 7 cut(s) 5, 8, 366, 1117, 1564, 1597, 1678
TspDTI ATGAA 6 cut(s) 155, 806, 1335, 1622, 1755, 1865
TspGWI ACGGA 6 cut(s) 336, 407, 541, 721, 1267, 1990
TspRI CASTG 2 cut(s) 82, 257
Tth111I GACNNNGTC 2 cut(s) 95, 551
VneI GTGCAC 2 cut(s) 1531, 1820
VpaK11BI GGWCC 1 cut(s) 614
XapI RAATTY 4 cut(s) 520, 864, 1322, 1497
XceI RCATGY 1 cut(s) 1541
XcmI CCANNNNNNNNNTGG 1 cut(s) 994
XmiI GTMKAC 1 cut(s) 108
XmnI GAANNNNTTC 1 cut(s) 886
ZraI GACGTC 2 cut(s) 1189, 1645
ZrmI AGTACT 1 cut(s) 401
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.