pycom15g38000

Conserved oligomeric Golgi complex subunit 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0005295
Physical Location & Seq
Reverse (-)
37893351 .. 37896081
2731 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2070 bp
ATGCCGAGTCCCTCTTCCGGTCCAAACCCATTGCCGAGATCAGAACCGTCGAGTCCACCACCCGCACCCAGAGGATCGATCCAGTCCAAGAAGGAGGAGCTCCGCCAACTCGTCGGTACTCGCTACCGCGATCTCATTGACTCCGCCGATTCCATCGTCCTCATGAAGCGCTTCTCCCACTCCATCTCCCAAAACCTCTCTTCCGTCCACTACTCTATCAATTCCCTCTCCTCCGCATCCTCCGCCGACACCCCCGACTCATCCCGCCACGACCCGACCCGCCACCGCATCTATGGAATCGCCTGCCGGGTCAAGTACCTCGTCGACACTCCGGAGAACATCTGGGGCTGCCTCGACGAGTCCATGTTTCTTGAGTCCGCCGCGCGCTACGTTCGCGCCAGTCACGTATACTCCATTCTCGCCCTCCCTGGTCACGTGCGCTTCCTCTCCAACTTCCCTCTCCTCCAGCACCAGTGGCAGATCGTCGACAGTTTCAAGTCCCAGATCTCTCTGCGCGCCCGCGACCGCCTCTTCGATCGAGAGCTCCACCTGCCCGTCTCCTCCTACGCCGACGCATTGGCCGTCGTCGCTTTGATCGACGACCTCCGCCCGGAGTACGTACTCTCCCTCTTCCTCGACACTCGGAAGTCGTGGGTTTCCGGGATACTCAATGCTTGCCGTGCCGATGCTCAGTGCTCCGACGTCGTTTCGGTGCTGTGCGAGGCTCTGCGGGTGATTCAGGTGACTGTGGGGCAGGTTGGTGAGCTCTTCTTGCGGGTGCTCAGTGACATGCCGTTGTTCTACAAGGTGGTATTAGGTAGTCCTCCTGCATCCCAACTGTTCGGTGGAATTCCCAATCCAGATGAGGAGATCAAGCTTTGGAATTCGTTTCGGGAGAAGCTCGAGTCTGCCATGGGAATGCTGGACAAGGATTACATTGCCAAGGCTTGTTGCTCTTGGCTTAGCGACTGCGGAGGCCAGGTGGTGGATAGGATCAACGGGAGGTTCCTCATCGACGCGATTGGCAGTGGCCAAGAGCTTGCCTCGGCTGAGAAGTTGATTAGGGAGACCATGAACAGCAAGGAGGTATTAGAAGGGAGCTTGGAGTGGCTCAAGAACGTTTTCGGGTCCAACATTGACCTGCCATGGAGTCGAATGAGTGAACTTGTTCTCGGAGACGATTCAGATCTCTGGGACAGTATCTTCGAATCTGCATTCGTCGCCAGGATGCAGGTGATTGTGGCATACAGGTTCAAGGAGCTCGTGAAGGCCGTGAACATTAAAGAGGGCAAACCCATAGATTTCCTTGGTGCTGGTGGTGGAGTTTGGTTTGTGGAAACCAAATCGAATAATGCTAAGAAAGGTACTGCTAGTGCTCTGCCTTGTGAAGAGAATTGTCTCAATTTCTATTTTGGTCCCCAAGTGAGTAGTATTCGAGATGCGGTGGATAGTAGTTGTCAGGATGTTCTTGATGACTTGCTGTGTTTCTTAGAATCGCCAAGGGCAGCTCTTAGGTTAAAGGATCTGGCACCGTATCTACAAGATAAGTGTTGCCAGACCATATCCAATATATTGGTGCAACTGAATAATGAGCTTCATAATTTGGAAATTGGCAAAGACACGCAAGGGCCGGTAACTGTTGACAGGGCACTTTTCATTGGGAGACTCTTGTTTGCATTGCAGAGCCACTCCAAACACATTCCCATCATTCTTGGTCCTCCGCGGTCTTGGGTAAATGTAACAGGGTCTGTAGTTCTCGATAAGTTCCCGCCCATGTCAAGACAATCTAGAGCTCCCGCTGATTCTCCAGTGCTTGATAGCCCCTCAGGTTCTAAAAGGCATACTTCATCTGCTACTGCTGCATTGCTTGGAGCAGGCCAAAGTGCAAGCCCTAAACTTGAAGAGCTTAATGTAACTATGCGAGATCTCCGTATTCGAGCGCATGGTTTGTGGATGTCGTGGTTGTCTGATGAGCTTTCAGTTATTCTTTCCCGTGAGGATCGATCTTCAAAAAGATTATGCTTTGTCATCATCAACTCCTCTGAGGGGTTGGGAAGAGACAGTTGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Vps51

Protein Analysis

690

Amino Acids

76.2

Weight (kDa)

6.07

Isoelectric Point (pI)

50.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
VPS51_Exo84_N PF08700 25 - 78 1e-09 Vps51/EXO84/COG1 N-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 558, 1222
AatII GACGTC 1 cut(s) 705
Acc36I ACCTGC 4 cut(s) 558, 745, 1149, 1222
AccB1I GGYRCC 1 cut(s) 1528
AccB7I CCANNNNNTGG 1 cut(s) 985
AccI GTMKAC 3 cut(s) 324, 408, 486
AccII CGCG 8 cut(s) 129, 383, 385, 396, 516, 522, 1019, 1723
AccIII TCCGGA 1 cut(s) 331
AclI AACGTT 1 cut(s) 1119
AclWI GGATC 5 cut(s) 73, 82, 1001, 1530, 2007
AcoI YGGCCR 2 cut(s) 579, 1030
AcsI RAATTY 2 cut(s) 849, 883
AcvI CACGTG 1 cut(s) 436
AcyI GRCGYC 1 cut(s) 702
AfaI GTAC 5 cut(s) 118, 317, 617, 621, 1366
AfeI AGCGCT 1 cut(s) 170
AfiI CCNNNNNNNGG 4 cut(s) 17, 610, 985, 2046
AgsI TTSAA 4 cut(s) 496, 1255, 1901, 2010
AjnI CCWGG 3 cut(s) 427, 978, 1223
Alw21I GWGCWC 8 cut(s) 102, 546, 698, 768, 783, 1263, 1378, 1795
Alw26I GTCTC 6 cut(s) 562, 1061, 1170, 1403, 1657, 2052
AlwI GGATC 5 cut(s) 73, 82, 1001, 1530, 2007
AlwNI CAGNNNCTG 1 cut(s) 1748
Ama87I CYCGRG 1 cut(s) 902
Aor13HI TCCGGA 1 cut(s) 331
Aor51HI AGCGCT 1 cut(s) 170
AoxI GGCC 6 cut(s) 579, 976, 1030, 1269, 1628, 1876
ApeKI GCWGC 3 cut(s) 348, 1505, 1859
ApoI RAATTY 2 cut(s) 849, 883
ArsI GACNNNNNNTTYG 4 cut(s) 515, 547, 1187, 1219
Asp700I GAANNNNTTC 3 cut(s) 170, 1121, 1167
AspLEI GCGC 8 cut(s) 171, 385, 387, 398, 441, 516, 518, 1942
AspS9I GGNCC 5 cut(s) 20, 1128, 1415, 1628, 1715
AsuC2I CCSGG 3 cut(s) 308, 611, 661
AsuHPI GGTGA 4 cut(s) 745, 754, 773, 1246
AsuII TTCGAA 1 cut(s) 1206
AvaI CYCGRG 1 cut(s) 902
AvaII GGWCC 4 cut(s) 20, 1128, 1415, 1715
AxyI CCTNAGG 1 cut(s) 1825
BaeGI GKGCMC 1 cut(s) 1651
BalI TGGCCA 1 cut(s) 1032
BanI GGYRCC 1 cut(s) 1528
BanII GRGCYC 5 cut(s) 102, 546, 768, 1263, 1795
BauI CACGAG 1 cut(s) 1262
BbrPI CACGTG 1 cut(s) 436
Bbv12I GWGCWC 8 cut(s) 102, 546, 698, 768, 783, 1263, 1378, 1795
BbvI GCAGC 3 cut(s) 335, 1517, 1846
BccI CCATC 3 cut(s) 161, 191, 1712
BceAI ACGGC 4 cut(s) 566, 663, 778, 1256
BciT130I CCWGG 3 cut(s) 429, 980, 1225
BciVI GTATCC 1 cut(s) 657
BcnI CCSGG 3 cut(s) 308, 611, 661
BcoDI GTCTC 6 cut(s) 562, 1061, 1170, 1403, 1657, 2052
BfaI CTAG 2 cut(s) 1371, 1788
BfmI CTRYAG 1 cut(s) 1749
BfoI RGCGCY 1 cut(s) 172
BfuAI ACCTGC 4 cut(s) 558, 745, 1149, 1222
BfuI GTATCC 1 cut(s) 657
BglII AGATCT 3 cut(s) 504, 1186, 1924
BisI GCNGC 4 cut(s) 349, 381, 1506, 1860
BlpI GCTNAGC 1 cut(s) 962
BlsI GCNGC 4 cut(s) 350, 382, 1507, 1861
Bme1390I CCNGG 6 cut(s) 308, 429, 611, 661, 980, 1225
Bme18I GGWCC 4 cut(s) 20, 1128, 1415, 1715
BmeT110I CYCGRG 1 cut(s) 902
BmgT120I GGNCC 5 cut(s) 20, 1128, 1415, 1628, 1715
BmiI GGNNCC 4 cut(s) 1007, 1129, 1417, 1530
BmrFI CCNGG 6 cut(s) 308, 429, 611, 661, 980, 1225
BmsI GCATC 6 cut(s) 245, 297, 676, 839, 1218, 1429
BplI GAGNNNNNCTC 2 cut(s) 1028, 1060
BpmI CTGGAG 2 cut(s) 449, 1791
Bpu1102I GCTNAGC 1 cut(s) 962
Bpu14I TTCGAA 1 cut(s) 1206
BpuEI CTTGAG 2 cut(s) 392, 1097
BpuMI CCSGG 3 cut(s) 308, 611, 661
Bsa29I ATCGAT 2 cut(s) 77, 2002
BsaAI YACGTR 3 cut(s) 406, 436, 619
BsaBI GATNNNNATC 1 cut(s) 1185
BsaHI GRCGYC 1 cut(s) 702
BsaI GGTCTC 1 cut(s) 1061
BsaJI CCNNGG 8 cut(s) 427, 912, 942, 1044, 1145, 1306, 1499, 1721
BsaWI WCCGGW 2 cut(s) 17, 331
BsaXI ACNNNNNCTCC 8 cut(s) 170, 200, 395, 425, 608, 638, 966, 996
Bsc4I CCNNNNNNNGG 4 cut(s) 17, 610, 985, 2046
Bse118I RCCGGY 1 cut(s) 1630
Bse1I ACTGG 4 cut(s) 82, 399, 472, 1808
Bse21I CCTNAGG 1 cut(s) 1825
Bse3DI GCAATG 4 cut(s) 29, 936, 1676, 1862
Bse8I GATNNNNATC 1 cut(s) 1185
BseAI TCCGGA 1 cut(s) 331
BseBI CCWGG 3 cut(s) 429, 980, 1225
BseCI ATCGAT 2 cut(s) 77, 2002
BseDI CCNNGG 8 cut(s) 427, 912, 942, 1044, 1145, 1306, 1499, 1721
BseGI GGATG 6 cut(s) 236, 260, 830, 1233, 1468, 1959
BseJI GATNNNNATC 1 cut(s) 1185
BseLI CCNNNNNNNGG 4 cut(s) 17, 610, 985, 2046
BseMI GCAATG 4 cut(s) 29, 936, 1676, 1862
BseMII CTCAG 5 cut(s) 704, 796, 1041, 1839, 2034
BseNI ACTGG 4 cut(s) 82, 399, 472, 1808
BsePI GCGCGC 2 cut(s) 383, 514
BseRI GAGGAG 6 cut(s) 110, 220, 452, 550, 881, 2029
BseSI GKGCMC 1 cut(s) 1651
BseXI GCAGC 3 cut(s) 335, 1517, 1846
Bsh1236I CGCG 8 cut(s) 129, 383, 385, 396, 516, 522, 1019, 1723
Bsh1285I CGRYCG 2 cut(s) 526, 538
BshFI GGCC 6 cut(s) 581, 978, 1032, 1271, 1630, 1878
BshNI GGYRCC 1 cut(s) 1528
BshVI ATCGAT 2 cut(s) 77, 2002
BsiEI CGRYCG 2 cut(s) 526, 538
BsiHKAI GWGCWC 8 cut(s) 102, 546, 698, 768, 783, 1263, 1378, 1795
BsiHKCI CYCGRG 1 cut(s) 902
BsiSI CCGG 6 cut(s) 18, 307, 332, 611, 660, 1631
BslFI GGGAC 3 cut(s) 484, 1208, 1401
BslI CCNNNNNNNGG 4 cut(s) 17, 610, 985, 2046
BsmAI GTCTC 6 cut(s) 562, 1061, 1170, 1403, 1657, 2052
BsmBI CGTCTC 2 cut(s) 562, 1170
BsmFI GGGAC 3 cut(s) 484, 1208, 1401
BsmI GAATGC 2 cut(s) 924, 1214
BsnI GGCC 6 cut(s) 581, 978, 1032, 1271, 1630, 1878
Bso31I GGTCTC 1 cut(s) 1061
BsoBI CYCGRG 1 cut(s) 902
Bsp119I TTCGAA 1 cut(s) 1206
Bsp1286I GDGCHC 9 cut(s) 102, 546, 698, 768, 783, 1263, 1378, 1651, 1795
Bsp13I TCCGGA 1 cut(s) 331
Bsp1720I GCTNAGC 1 cut(s) 962
Bsp19I CCATGG 2 cut(s) 912, 1145
BspANI GGCC 6 cut(s) 581, 978, 1032, 1271, 1630, 1878
BspCNI CTCAG 5 cut(s) 703, 795, 1042, 1838, 2035
BspDI ATCGAT 2 cut(s) 77, 2002
BspEI TCCGGA 1 cut(s) 331
BspFNI CGCG 8 cut(s) 129, 383, 385, 396, 516, 522, 1019, 1723
BspHI TCATGA 1 cut(s) 162
BspLI GGNNCC 4 cut(s) 1007, 1129, 1417, 1530
BspMI ACCTGC 4 cut(s) 558, 745, 1149, 1222
BspPI GGATC 5 cut(s) 73, 82, 1001, 1530, 2007
BspQI GCTCTTC 2 cut(s) 773, 1896
BspT104I TTCGAA 1 cut(s) 1206
BspT107I GGYRCC 1 cut(s) 1528
BspTNI GGTCTC 1 cut(s) 1061
BsrDI GCAATG 4 cut(s) 29, 936, 1676, 1862
BsrFI RCCGGY 1 cut(s) 1630
BsrI ACTGG 4 cut(s) 82, 399, 472, 1808
BssAI RCCGGY 1 cut(s) 1630
BssECI CCNNGG 8 cut(s) 427, 912, 942, 1044, 1145, 1306, 1499, 1721
BssHII GCGCGC 2 cut(s) 383, 514
BssNAI GTATAC 1 cut(s) 409
BssNI GRCGYC 1 cut(s) 702
BssSI CACGAG 1 cut(s) 1262
BssT1I CCWWGG 5 cut(s) 912, 942, 1145, 1306, 1499
Bst1107I GTATAC 1 cut(s) 409
Bst2BI CACGAG 1 cut(s) 1262
Bst2UI CCWGG 3 cut(s) 429, 980, 1225
Bst4CI ACNGT 8 cut(s) 48, 491, 748, 840, 1199, 1533, 1639, 2063
Bst6I CTCTTC 8 cut(s) 19, 205, 536, 635, 773, 1383, 1896, 2050
BstACI GRCGYC 1 cut(s) 702
BstBAI YACGTR 3 cut(s) 406, 436, 619
BstBI TTCGAA 1 cut(s) 1206
BstC8I GCNNGC 8 cut(s) 304, 385, 516, 520, 676, 1041, 1876, 1888
BstDEI CTNAG 9 cut(s) 690, 782, 962, 1050, 1356, 1489, 1511, 1825, 2043
BstDSI CCRYGG 3 cut(s) 912, 1145, 1721
BstF5I GGATG 6 cut(s) 236, 260, 830, 1233, 1468, 1959
BstFNI CGCG 8 cut(s) 129, 383, 385, 396, 516, 522, 1019, 1723
BstH2I RGCGCY 1 cut(s) 172
BstHHI GCGC 8 cut(s) 171, 385, 387, 398, 441, 516, 518, 1942
BstMAI GTCTC 6 cut(s) 562, 1061, 1170, 1403, 1657, 2052
BstMCI CGRYCG 2 cut(s) 526, 538
BstMWI GCNNNNNNNGC 9 cut(s) 242, 393, 475, 550, 587, 680, 772, 1220, 1859
BstNI CCWGG 3 cut(s) 429, 980, 1225
BstNSI RCATGY 1 cut(s) 793
BstSCI CCNGG 6 cut(s) 306, 427, 609, 659, 978, 1223
BstSFI CTRYAG 1 cut(s) 1749
BstSLI GKGCMC 1 cut(s) 1651
BstSNI TACGTA 1 cut(s) 619
BstUI CGCG 8 cut(s) 129, 383, 385, 396, 516, 522, 1019, 1723
BstV1I GCAGC 3 cut(s) 335, 1517, 1846
BstX2I RGATCY 4 cut(s) 504, 1186, 1522, 1924
BstXI CCANNNNNNTGG 1 cut(s) 1573
BstYI RGATCY 4 cut(s) 504, 1186, 1522, 1924
BstZ17I GTATAC 1 cut(s) 409
Bsu15I ATCGAT 2 cut(s) 77, 2002
Bsu36I CCTNAGG 1 cut(s) 1825
BsuI GTATCC 1 cut(s) 657
BsuRI GGCC 6 cut(s) 581, 978, 1032, 1271, 1630, 1878
BsuTUI ATCGAT 2 cut(s) 77, 2002
BtgI CCRYGG 3 cut(s) 912, 1145, 1721
BtsCI GGATG 6 cut(s) 236, 260, 830, 1233, 1468, 1959
BtsI GCAGTG 1 cut(s) 1033
BtsIMutI CAGTG 5 cut(s) 479, 698, 790, 1033, 1815
BveI ACCTGC 4 cut(s) 558, 745, 1149, 1222
Cac8I GCNNGC 8 cut(s) 304, 385, 516, 520, 676, 1041, 1876, 1888
CaiI CAGNNNCTG 1 cut(s) 1748
CciI TCATGA 1 cut(s) 162
CfoI GCGC 8 cut(s) 171, 385, 387, 398, 441, 516, 518, 1942
Cfr10I RCCGGY 1 cut(s) 1630
Cfr13I GGNCC 5 cut(s) 20, 1128, 1415, 1628, 1715
Cfr42I CCGCGG 1 cut(s) 1724
ClaI ATCGAT 2 cut(s) 77, 2002
CseI GACGC 2 cut(s) 581, 1025
Csp6I GTAC 5 cut(s) 117, 316, 616, 620, 1365
CviAII CATG 8 cut(s) 163, 364, 790, 913, 1072, 1146, 1774, 1943
CviQI GTAC 5 cut(s) 117, 316, 616, 620, 1365
DdeI CTNAG 9 cut(s) 690, 782, 962, 1050, 1356, 1489, 1511, 1825, 2043
EaeI YGGCCR 2 cut(s) 579, 1030
Eam1104I CTCTTC 8 cut(s) 19, 205, 536, 635, 773, 1383, 1896, 2050
EarI CTCTTC 8 cut(s) 19, 205, 536, 635, 773, 1383, 1896, 2050
EciI GGCGGA 5 cut(s) 92, 133, 232, 367, 596
Ecl136II GAGCTC 5 cut(s) 100, 544, 766, 1261, 1793
Eco105I TACGTA 1 cut(s) 619
Eco130I CCWWGG 5 cut(s) 912, 942, 1145, 1306, 1499
Eco24I GRGCYC 5 cut(s) 102, 546, 768, 1263, 1795
Eco31I GGTCTC 1 cut(s) 1061
Eco47I GGWCC 4 cut(s) 20, 1128, 1415, 1715
Eco47III AGCGCT 1 cut(s) 170
Eco53kI GAGCTC 5 cut(s) 100, 544, 766, 1261, 1793
Eco72I CACGTG 1 cut(s) 436
Eco81I CCTNAGG 1 cut(s) 1825
Eco88I CYCGRG 1 cut(s) 902
EcoICRI GAGCTC 5 cut(s) 100, 544, 766, 1261, 1793
EcoRI GAATTC 2 cut(s) 849, 883
EcoRII CCWGG 3 cut(s) 427, 978, 1223
EcoT14I CCWWGG 5 cut(s) 912, 942, 1145, 1306, 1499
EcoT38I GRGCYC 5 cut(s) 102, 546, 768, 1263, 1795
ErhI CCWWGG 5 cut(s) 912, 942, 1145, 1306, 1499
Esp3I CGTCTC 2 cut(s) 562, 1170
FaeI CATG 8 cut(s) 166, 367, 793, 916, 1075, 1149, 1777, 1946
FalI AAGNNNNNCTT 2 cut(s) 1828, 1860
FaqI GGGAC 3 cut(s) 484, 1208, 1401
FatI CATG 8 cut(s) 162, 363, 789, 912, 1071, 1145, 1773, 1942
FauI CCCGC 8 cut(s) 70, 272, 287, 527, 723, 768, 1776, 1804
FblI GTMKAC 3 cut(s) 324, 408, 486
Fnu4HI GCNGC 4 cut(s) 349, 381, 1506, 1860
FokI GGATG 6 cut(s) 223, 247, 817, 1240, 1475, 1966
FriOI GRGCYC 5 cut(s) 102, 546, 768, 1263, 1795
Fsp4HI GCNGC 4 cut(s) 349, 381, 1506, 1860
FspBI CTAG 2 cut(s) 1371, 1788
GlaI GCGC 8 cut(s) 170, 384, 386, 397, 440, 515, 517, 1941
GluI GCNGC 4 cut(s) 349, 381, 1506, 1860
GsuI CTGGAG 2 cut(s) 449, 1791
HaeII RGCGCY 1 cut(s) 172
HaeIII GGCC 6 cut(s) 581, 978, 1032, 1271, 1630, 1878
HapII CCGG 6 cut(s) 18, 307, 332, 611, 660, 1631
HgaI GACGC 2 cut(s) 581, 1025
HhaI GCGC 8 cut(s) 171, 385, 387, 398, 441, 516, 518, 1942
Hin1I GRCGYC 1 cut(s) 702
Hin1II CATG 8 cut(s) 166, 367, 793, 916, 1075, 1149, 1777, 1946
Hin6I GCGC 8 cut(s) 169, 383, 385, 396, 439, 514, 516, 1940
HinP1I GCGC 8 cut(s) 169, 383, 385, 396, 439, 514, 516, 1940
HincII GTYRAC 3 cut(s) 325, 487, 1642
HindII GTYRAC 3 cut(s) 325, 487, 1642
HindIII AAGCTT 1 cut(s) 875
HpaII CCGG 6 cut(s) 18, 307, 332, 611, 660, 1631
HphI GGTGA 4 cut(s) 745, 754, 773, 1246
Hpy166II GTNNAC 8 cut(s) 56, 208, 325, 409, 487, 1163, 1276, 1642
Hpy188I TCNGA 7 cut(s) 43, 645, 700, 1175, 1186, 1969, 2044
Hpy8I GTNNAC 8 cut(s) 56, 208, 325, 409, 487, 1163, 1276, 1642
HpyAV CCTTC 3 cut(s) 85, 1088, 1261
HpyCH4III ACNGT 8 cut(s) 48, 491, 748, 840, 1199, 1533, 1639, 2063
HpyCH4IV ACGT 6 cut(s) 390, 405, 435, 618, 702, 1119
HpyCH4V TGCA 8 cut(s) 830, 1214, 1231, 1579, 1676, 1681, 1862, 1886
HpyF10VI GCNNNNNNNGC 9 cut(s) 242, 393, 475, 550, 587, 680, 772, 1220, 1859
HpyF3I CTNAG 9 cut(s) 690, 782, 962, 1050, 1356, 1489, 1511, 1825, 2043
HpySE526I ACGT 6 cut(s) 390, 405, 435, 618, 702, 1119
Hsp92I GRCGYC 1 cut(s) 702
Hsp92II CATG 8 cut(s) 166, 367, 793, 916, 1075, 1149, 1777, 1946
HspAI GCGC 8 cut(s) 169, 383, 385, 396, 439, 514, 516, 1940
Kpn2I TCCGGA 1 cut(s) 331
KspI CCGCGG 1 cut(s) 1724
LguI GCTCTTC 2 cut(s) 773, 1896
LmnI GCTCC 8 cut(s) 97, 105, 549, 701, 1098, 1258, 1798, 1871
Lsp1109I GCAGC 3 cut(s) 335, 1517, 1846
LweI GCATC 6 cut(s) 245, 297, 676, 839, 1218, 1429
MaeI CTAG 2 cut(s) 1371, 1788
MaeII ACGT 6 cut(s) 390, 405, 435, 618, 702, 1119
MaeIII GTNAC 7 cut(s) 401, 431, 742, 785, 1633, 1738, 1912
MflI RGATCY 4 cut(s) 504, 1186, 1522, 1924
MhlI GDGCHC 9 cut(s) 102, 546, 698, 768, 783, 1263, 1378, 1651, 1795
MlsI TGGCCA 1 cut(s) 1032
MluCI AATT 7 cut(s) 220, 849, 883, 1393, 1402, 1600, 1608
MluNI TGGCCA 1 cut(s) 1032
MlyI GAGTC 9 cut(s) 16, 61, 134, 251, 368, 383, 914, 1159, 1659
MmeI TCCRAC 3 cut(s) 474, 723, 1155
Mox20I TGGCCA 1 cut(s) 1032
MroI TCCGGA 1 cut(s) 331
MroXI GAANNNNTTC 3 cut(s) 170, 1121, 1167
MscI TGGCCA 1 cut(s) 1032
MseI TTAA 4 cut(s) 1281, 1517, 1908, 2068
MslI CAYNNNNRTG 1 cut(s) 917
Msp20I TGGCCA 1 cut(s) 1032
MspA1I CMGCKG 2 cut(s) 1723, 1799
MspI CCGG 6 cut(s) 18, 307, 332, 611, 660, 1631
MspR9I CCNGG 6 cut(s) 308, 429, 611, 661, 980, 1225
Mva1269I GAATGC 2 cut(s) 924, 1214
MvaI CCWGG 3 cut(s) 429, 980, 1225
MvnI CGCG 8 cut(s) 129, 383, 385, 396, 516, 522, 1019, 1723
MwoI GCNNNNNNNGC 9 cut(s) 242, 393, 475, 550, 587, 680, 772, 1220, 1859
NciI CCSGG 3 cut(s) 308, 611, 661
NcoI CCATGG 2 cut(s) 912, 1145
NlaIII CATG 8 cut(s) 166, 367, 793, 916, 1075, 1149, 1777, 1946
NlaIV GGNNCC 4 cut(s) 1007, 1129, 1417, 1530
NmeAIII GCCGAG 3 cut(s) 30, 60, 1025
NmuCI GTSAC 4 cut(s) 401, 431, 742, 785
NspI RCATGY 1 cut(s) 793
NspV TTCGAA 1 cut(s) 1206
PaeR7I CTCGAG 1 cut(s) 902
PagI TCATGA 1 cut(s) 162
PaqCI CACCTGC 2 cut(s) 558, 1222
PauI GCGCGC 2 cut(s) 383, 514
PciSI GCTCTTC 2 cut(s) 773, 1896
PcsI WCGNNNNNNNCGW 3 cut(s) 579, 594, 1269
PctI GAATGC 2 cut(s) 924, 1214
PdmI GAANNNNTTC 3 cut(s) 170, 1121, 1167
PfeI GAWTC 7 cut(s) 149, 297, 736, 1181, 1208, 1493, 1802
PflMI CCANNNNNTGG 1 cut(s) 985
PfoI TCCNGGA 1 cut(s) 659
PkrI GCNGC 4 cut(s) 350, 382, 1507, 1861
Ple19I CGATCG 1 cut(s) 538
PleI GAGTC 9 cut(s) 15, 60, 134, 251, 367, 382, 913, 1158, 1659
PmaCI CACGTG 1 cut(s) 436
PmlI CACGTG 1 cut(s) 436
PpsI GAGTC 9 cut(s) 15, 60, 134, 251, 367, 382, 913, 1158, 1659
Ppu21I YACGTR 3 cut(s) 406, 436, 619
Psp124BI GAGCTC 5 cut(s) 102, 546, 768, 1263, 1795
Psp1406I AACGTT 1 cut(s) 1119
Psp6I CCWGG 3 cut(s) 427, 978, 1223
PspCI CACGTG 1 cut(s) 436
PspGI CCWGG 3 cut(s) 427, 978, 1223
PspN4I GGNNCC 4 cut(s) 1007, 1129, 1417, 1530
PspPI GGNCC 5 cut(s) 20, 1128, 1415, 1628, 1715
PspXI VCTCGAGB 1 cut(s) 902
PstNI CAGNNNCTG 1 cut(s) 1748
PsuI RGATCY 4 cut(s) 504, 1186, 1522, 1924
PteI GCGCGC 2 cut(s) 383, 514
PvuI CGATCG 1 cut(s) 538
RsaI GTAC 5 cut(s) 118, 317, 617, 621, 1366
RsaNI GTAC 5 cut(s) 117, 316, 616, 620, 1365
RseI CAYNNNNRTG 1 cut(s) 917
SacI GAGCTC 5 cut(s) 102, 546, 768, 1263, 1795
SacII CCGCGG 1 cut(s) 1724
SalI GTCGAC 2 cut(s) 323, 485
SapI GCTCTTC 2 cut(s) 773, 1896
SaqAI TTAA 4 cut(s) 1281, 1517, 1908, 2068
SatI GCNGC 4 cut(s) 349, 381, 1506, 1860
Sau96I GGNCC 5 cut(s) 20, 1128, 1415, 1628, 1715
SchI GAGTC 9 cut(s) 16, 61, 134, 251, 368, 383, 914, 1159, 1659
ScrFI CCNGG 6 cut(s) 308, 429, 611, 661, 980, 1225
SduI GDGCHC 9 cut(s) 102, 546, 698, 768, 783, 1263, 1378, 1651, 1795
SfaNI GCATC 6 cut(s) 245, 297, 676, 839, 1218, 1429
SfcI CTRYAG 1 cut(s) 1749
Sfr274I CTCGAG 1 cut(s) 902
Sfr303I CCGCGG 1 cut(s) 1724
SfuI TTCGAA 1 cut(s) 1206
SgrBI CCGCGG 1 cut(s) 1724
SinI GGWCC 4 cut(s) 20, 1128, 1415, 1715
SlaI CTCGAG 1 cut(s) 902
SmiMI CAYNNNNRTG 1 cut(s) 917
SmlI CTYRAG 3 cut(s) 371, 902, 1112
SmoI CTYRAG 3 cut(s) 371, 902, 1112
SnaBI TACGTA 1 cut(s) 619
Sse9I AATT 7 cut(s) 220, 849, 883, 1393, 1402, 1600, 1608
SspMI CTAG 2 cut(s) 1371, 1788
SstI GAGCTC 5 cut(s) 102, 546, 768, 1263, 1795
StyD4I CCNGG 6 cut(s) 306, 427, 609, 659, 978, 1223
StyI CCWWGG 5 cut(s) 912, 942, 1145, 1306, 1499
TaaI ACNGT 8 cut(s) 48, 491, 748, 840, 1199, 1533, 1639, 2063
TaiI ACGT 6 cut(s) 393, 408, 438, 621, 705, 1122
TasI AATT 7 cut(s) 220, 849, 883, 1393, 1402, 1600, 1608
TauI GCSGC 1 cut(s) 383
TfiI GAWTC 7 cut(s) 149, 297, 736, 1181, 1208, 1493, 1802
Tru1I TTAA 4 cut(s) 1281, 1517, 1908, 2068
Tru9I TTAA 4 cut(s) 1281, 1517, 1908, 2068
TscAI CASTG 5 cut(s) 479, 698, 790, 1033, 1815
TseFI GTSAC 4 cut(s) 401, 431, 742, 785
TseI GCWGC 3 cut(s) 348, 1505, 1859
Tsp45I GTSAC 4 cut(s) 401, 431, 742, 785
TspDTI ATGAA 5 cut(s) 179, 1088, 1586, 1645, 1836
TspGWI ACGGA 2 cut(s) 193, 1919
TspRI CASTG 5 cut(s) 479, 698, 790, 1033, 1815
Van91I CCANNNNNTGG 1 cut(s) 985
VpaK11BI GGWCC 4 cut(s) 20, 1128, 1415, 1715
XapI RAATTY 2 cut(s) 849, 883
XbaI TCTAGA 1 cut(s) 1787
XceI RCATGY 1 cut(s) 793
XcmI CCANNNNNNNNNTGG 3 cut(s) 290, 842, 919
XhoI CTCGAG 1 cut(s) 902
XmiI GTMKAC 3 cut(s) 324, 408, 486
XmnI GAANNNNTTC 3 cut(s) 170, 1121, 1167
XspI CTAG 2 cut(s) 1371, 1788
ZraI GACGTC 1 cut(s) 703
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.