pycom16g07560
ERF Family

superfamily. Protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
OG0007183
Physical Location & Seq
Forward (+)
4942865 .. 4944187
1323 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom16g07560.2

Sequence Viewer

Length: 1026 bp
ATGGCCGCAACTGTTTCACTCTCGTTCTCTTTAGATCCACAGCACCACCACCACTGCCATCTCTACCACTTCAGTCCCCGCCAAACCCTTCCCTTCCCTCCGTCAACCTCCTCATCTCTTAGTCTTCCCCCCAAATACCCACTTTCTATTTTCCCCAATTCGGACCGTTTCTCCTTCAAGTCTTCCTCCTCCCCATCTCGTTCTTCCACTACCACCACCGCTACTGATTCCACTACTACTGATTCCGCAGCTACTACTTTAACAGCTTCGTCATTCCTTGAATACCCACTTCGAACATGTAAGTTTCTGAGCAATGAAGAGCTCGAGCAGCTCAAACTCCTCGAGGGTTTCAGGTATTACCAGGAATTGGAATCTGGGTCGATGTGGGTTCGGGTGATGAGGCCGGAAGAGTTGGACATCACCGTTGGGTTGCTCGCCGAGTCGTTTGCGGAGTCGATGCTTTTGCCTTCTGGGTACGTGTCTGTGCTGGGATACTTGGTCAAGCAGTACTTGTTTGAGAGAATGGAGCTGCTTCCCAACACTGCCACGCTCATGGGGTTTTACAGAAGAAAAAAAGAAGAGGGAAAGGCAGAAGAAGAACAACTGGAAGAAGTAGAAGATGAAGTTGAGCTTTTGGCGGGGACTGTGGAAGTTTGCTTTAACAAAAAGGGGGCCAATGCTTCTCCTCCCACACCAACTCCTCCCAAGAATTCGCCTTATATAAGTAACATGGCCGTGAAAAAGTCGCTTCGGAGGAGGGGCATTGGCTGGCATCTTTTGAAGGCAAGCGAGGAACTAATCTCGCAGATGAGTTCCTCAAGAGAGGTGTACTTGCATTGCAGGATGATTGACACAGCTCCATTCAACATGTATAAAAAAGCAGGATACGACATTGTAAAGACAGATAACATTTTGGTTATGTTGCTGTTGCAGAGGCGCAAGCACTTAATGTGCAAGAAAATTCCAGTGTTAAACAGCTTTTCGGAATCAGATACGTCATGCTCTGAAGAGGAATCAACACCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Acetyltransf_1 Acetyltransf_10 FR47

Protein Analysis

342

Amino Acids

38.5

Weight (kDa)

6.18

Isoelectric Point (pI)

64.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 341
AccB7I CCANNNNNTGG 1 cut(s) 367
AciI CCGC 6 cut(s) 6, 79, 219, 246, 449, 638
AclWI GGATC 1 cut(s) 29
AcoI YGGCCR 2 cut(s) 3, 732
AcsI RAATTY 2 cut(s) 709, 960
AcuI CTGAAG 2 cut(s) 55, 1026
AfaI GTAC 3 cut(s) 476, 509, 830
AfiI CCNNNNNNNGG 2 cut(s) 160, 367
AflIII ACRYGT 3 cut(s) 296, 477, 867
AgsI TTSAA 4 cut(s) 178, 281, 781, 865
AjnI CCWGG 1 cut(s) 360
AluBI AGCT 8 cut(s) 251, 266, 322, 331, 529, 631, 857, 978
AluI AGCT 8 cut(s) 251, 266, 322, 331, 529, 631, 857, 978
Alw21I GWGCWC 1 cut(s) 324
AlwI GGATC 1 cut(s) 29
Ama87I CYCGRG 2 cut(s) 323, 341
AoxI GGCC 4 cut(s) 3, 401, 672, 732
ApeKI GCWGC 3 cut(s) 248, 328, 529
ApoI RAATTY 2 cut(s) 709, 960
AspLEI GCGC 1 cut(s) 939
AspS9I GGNCC 2 cut(s) 163, 672
AsuHPI GGTGA 2 cut(s) 406, 412
AsuII TTCGAA 1 cut(s) 292
AvaI CYCGRG 2 cut(s) 323, 341
AvaII GGWCC 1 cut(s) 163
BanII GRGCYC 1 cut(s) 324
BbsI GAAGAC 2 cut(s) 116, 174
Bbv12I GWGCWC 1 cut(s) 324
BbvI GCAGC 3 cut(s) 260, 340, 516
BccI CCATC 2 cut(s) 66, 202
BceAI ACGGC 1 cut(s) 719
BcgI CGANNNNNNTGC 4 cut(s) 428, 445, 462, 479
BciT130I CCWGG 1 cut(s) 362
BciVI GTATCC 2 cut(s) 485, 878
BfuI GTATCC 2 cut(s) 485, 878
BisI GCNGC 4 cut(s) 6, 249, 329, 530
BlsI GCNGC 4 cut(s) 7, 250, 330, 531
BmcAI AGTACT 1 cut(s) 509
Bme1390I CCNGG 1 cut(s) 362
Bme18I GGWCC 1 cut(s) 163
BmeT110I CYCGRG 2 cut(s) 323, 341
BmgT120I GGNCC 2 cut(s) 163, 672
BmiI GGNNCC 1 cut(s) 673
BmrFI CCNGG 1 cut(s) 362
BmsI GCATC 2 cut(s) 447, 781
BpiI GAAGAC 2 cut(s) 116, 174
Bpu14I TTCGAA 1 cut(s) 292
BpuEI CTTGAG 1 cut(s) 802
BsaAI YACGTR 1 cut(s) 478
BsaXI ACNNNNNCTCC 4 cut(s) 155, 185, 682, 712
Bsc4I CCNNNNNNNGG 2 cut(s) 160, 367
Bse1I ACTGG 2 cut(s) 609, 965
Bse3DI GCAATG 2 cut(s) 319, 835
BseBI CCWGG 1 cut(s) 362
BseGI GGATG 1 cut(s) 849
BseLI CCNNNNNNNGG 2 cut(s) 160, 367
BseMI GCAATG 2 cut(s) 319, 835
BseMII CTCAG 1 cut(s) 299
BseNI ACTGG 2 cut(s) 609, 965
BseRI GAGGAG 6 cut(s) 100, 178, 329, 675, 690, 769
BseXI GCAGC 3 cut(s) 260, 340, 516
BseYI CCCAGC 1 cut(s) 487
BshFI GGCC 4 cut(s) 5, 403, 674, 734
BsiHKAI GWGCWC 1 cut(s) 324
BsiHKCI CYCGRG 2 cut(s) 323, 341
BsiSI CCGG 1 cut(s) 404
BslFI GGGAC 2 cut(s) 60, 655
BslI CCNNNNNNNGG 2 cut(s) 160, 367
BsmFI GGGAC 2 cut(s) 60, 655
BsnI GGCC 4 cut(s) 5, 403, 674, 734
BsoBI CYCGRG 2 cut(s) 323, 341
Bsp119I TTCGAA 1 cut(s) 292
Bsp1286I GDGCHC 1 cut(s) 324
Bsp143I GATC 1 cut(s) 34
BspACI CCGC 6 cut(s) 6, 79, 219, 246, 449, 638
BspANI GGCC 4 cut(s) 5, 403, 674, 734
BspCNI CTCAG 1 cut(s) 300
BspLI GGNNCC 1 cut(s) 673
BspPI GGATC 1 cut(s) 29
BspQI GCTCTTC 1 cut(s) 312
BspT104I TTCGAA 1 cut(s) 292
BsrDI GCAATG 2 cut(s) 319, 835
BsrI ACTGG 2 cut(s) 609, 965
BssMI GATC 1 cut(s) 34
Bst2UI CCWGG 1 cut(s) 362
Bst4CI ACNGT 4 cut(s) 13, 167, 424, 646
Bst6I CTCTTC 4 cut(s) 312, 402, 573, 1002
BstBAI YACGTR 1 cut(s) 478
BstBI TTCGAA 1 cut(s) 292
BstC8I GCNNGC 4 cut(s) 435, 770, 787, 941
BstDEI CTNAG 2 cut(s) 119, 308
BstF5I GGATG 1 cut(s) 849
BstHHI GCGC 1 cut(s) 939
BstKTI GATC 1 cut(s) 37
BstMBI GATC 1 cut(s) 34
BstMWI GCNNNNNNNGC 1 cut(s) 328
BstNI CCWGG 1 cut(s) 362
BstNSI RCATGY 2 cut(s) 300, 871
BstSCI CCNGG 1 cut(s) 360
BstV1I GCAGC 3 cut(s) 260, 340, 516
BstV2I GAAGAC 2 cut(s) 116, 174
BstX2I RGATCY 1 cut(s) 34
BstXI CCANNNNNNTGG 1 cut(s) 553
BstYI RGATCY 1 cut(s) 34
BsuI GTATCC 2 cut(s) 485, 878
BsuRI GGCC 4 cut(s) 5, 403, 674, 734
BtsCI GGATG 1 cut(s) 849
BtsI GCAGTG 2 cut(s) 52, 540
BtsIMutI CAGTG 3 cut(s) 52, 540, 972
Cac8I GCNNGC 4 cut(s) 435, 770, 787, 941
CfoI GCGC 1 cut(s) 939
Cfr13I GGNCC 2 cut(s) 163, 672
CpoI CGGWCCG 1 cut(s) 163
Csp6I GTAC 3 cut(s) 475, 508, 829
CspI CGGWCCG 1 cut(s) 163
CviAII CATG 6 cut(s) 297, 553, 730, 868, 999, 1023
CviQI GTAC 3 cut(s) 475, 508, 829
DdeI CTNAG 2 cut(s) 119, 308
DpnI GATC 1 cut(s) 36
DpnII GATC 1 cut(s) 34
EaeI YGGCCR 2 cut(s) 3, 732
Eam1104I CTCTTC 4 cut(s) 312, 402, 573, 1002
EarI CTCTTC 4 cut(s) 312, 402, 573, 1002
Ecl136II GAGCTC 1 cut(s) 322
Eco24I GRGCYC 1 cut(s) 324
Eco47I GGWCC 1 cut(s) 163
Eco53kI GAGCTC 1 cut(s) 322
Eco57I CTGAAG 2 cut(s) 55, 1026
Eco88I CYCGRG 2 cut(s) 323, 341
EcoICRI GAGCTC 1 cut(s) 322
EcoRI GAATTC 1 cut(s) 709
EcoRII CCWGG 1 cut(s) 360
EcoT38I GRGCYC 1 cut(s) 324
FaeI CATG 6 cut(s) 300, 556, 733, 871, 1002, 1026
FalI AAGNNNNNCTT 4 cut(s) 494, 526, 615, 647
FaqI GGGAC 2 cut(s) 60, 655
FatI CATG 6 cut(s) 296, 552, 729, 867, 998, 1022
FauI CCCGC 2 cut(s) 86, 631
Fnu4HI GCNGC 4 cut(s) 6, 249, 329, 530
FokI GGATG 1 cut(s) 856
FriOI GRGCYC 1 cut(s) 324
Fsp4HI GCNGC 4 cut(s) 6, 249, 329, 530
GlaI GCGC 1 cut(s) 938
GluI GCNGC 4 cut(s) 6, 249, 329, 530
GsaI CCCAGC 1 cut(s) 491
HaeIII GGCC 4 cut(s) 5, 403, 674, 734
HapII CCGG 1 cut(s) 404
HhaI GCGC 1 cut(s) 939
Hin1II CATG 6 cut(s) 300, 556, 733, 871, 1002, 1026
Hin6I GCGC 1 cut(s) 937
HinP1I GCGC 1 cut(s) 937
HincII GTYRAC 1 cut(s) 105
HindII GTYRAC 1 cut(s) 105
HinfI GANTC 7 cut(s) 227, 242, 371, 440, 452, 986, 1013
HpaII CCGG 1 cut(s) 404
HphI GGTGA 2 cut(s) 406, 412
Hpy166II GTNNAC 2 cut(s) 105, 829
Hpy188I TCNGA 6 cut(s) 163, 309, 753, 985, 991, 1006
Hpy188III TCNNGA 1 cut(s) 819
Hpy8I GTNNAC 2 cut(s) 105, 829
HpyAV CCTTC 5 cut(s) 98, 103, 184, 477, 775
HpyCH4III ACNGT 4 cut(s) 13, 167, 424, 646
HpyCH4IV ACGT 2 cut(s) 477, 995
HpyCH4V TGCA 4 cut(s) 835, 840, 931, 954
HpyF10VI GCNNNNNNNGC 1 cut(s) 328
HpyF3I CTNAG 2 cut(s) 119, 308
HpySE526I ACGT 2 cut(s) 477, 995
Hsp92II CATG 6 cut(s) 300, 556, 733, 871, 1002, 1026
HspAI GCGC 1 cut(s) 937
Kzo9I GATC 1 cut(s) 34
LguI GCTCTTC 1 cut(s) 312
LmnI GCTCC 2 cut(s) 526, 862
Lsp1109I GCAGC 3 cut(s) 260, 340, 516
LweI GCATC 2 cut(s) 447, 781
MaeII ACGT 2 cut(s) 477, 995
MaeIII GTNAC 1 cut(s) 725
MalI GATC 1 cut(s) 36
MboI GATC 1 cut(s) 34
MflI RGATCY 1 cut(s) 34
MhlI GDGCHC 1 cut(s) 324
MluCI AATT 4 cut(s) 157, 365, 709, 960
MlyI GAGTC 2 cut(s) 449, 461
MmeI TCCRAC 1 cut(s) 393
MseI TTAA 4 cut(s) 260, 660, 947, 971
MslI CAYNNNNRTG 2 cut(s) 551, 734
MspI CCGG 1 cut(s) 404
MspR9I CCNGG 1 cut(s) 362
MvaI CCWGG 1 cut(s) 362
MwoI GCNNNNNNNGC 1 cut(s) 328
NdeII GATC 1 cut(s) 34
NlaIII CATG 6 cut(s) 300, 556, 733, 871, 1002, 1026
NlaIV GGNNCC 1 cut(s) 673
NmeAIII GCCGAG 1 cut(s) 463
NspI RCATGY 2 cut(s) 300, 871
NspV TTCGAA 1 cut(s) 292
PaeR7I CTCGAG 2 cut(s) 323, 341
PciI ACATGT 2 cut(s) 296, 867
PciSI GCTCTTC 1 cut(s) 312
PfeI GAWTC 5 cut(s) 227, 242, 371, 986, 1013
PflMI CCANNNNNTGG 1 cut(s) 367
PkrI GCNGC 4 cut(s) 7, 250, 330, 531
PleI GAGTC 2 cut(s) 448, 460
PpsI GAGTC 2 cut(s) 448, 460
Ppu21I YACGTR 1 cut(s) 478
PscI ACATGT 2 cut(s) 296, 867
Psp124BI GAGCTC 1 cut(s) 324
Psp6I CCWGG 1 cut(s) 360
PspFI CCCAGC 1 cut(s) 487
PspGI CCWGG 1 cut(s) 360
PspN4I GGNNCC 1 cut(s) 673
PspPI GGNCC 2 cut(s) 163, 672
PspXI VCTCGAGB 2 cut(s) 323, 341
PsuI RGATCY 1 cut(s) 34
RsaI GTAC 3 cut(s) 476, 509, 830
RsaNI GTAC 3 cut(s) 475, 508, 829
RseI CAYNNNNRTG 2 cut(s) 551, 734
Rsr2I CGGWCCG 1 cut(s) 163
RsrII CGGWCCG 1 cut(s) 163
SacI GAGCTC 1 cut(s) 324
SapI GCTCTTC 1 cut(s) 312
SaqAI TTAA 4 cut(s) 260, 660, 947, 971
SatI GCNGC 4 cut(s) 6, 249, 329, 530
Sau3AI GATC 1 cut(s) 34
Sau96I GGNCC 2 cut(s) 163, 672
ScaI AGTACT 1 cut(s) 509
SchI GAGTC 2 cut(s) 449, 461
ScrFI CCNGG 1 cut(s) 362
SduI GDGCHC 1 cut(s) 324
SfaNI GCATC 2 cut(s) 447, 781
Sfr274I CTCGAG 2 cut(s) 323, 341
SfuI TTCGAA 1 cut(s) 292
SinI GGWCC 1 cut(s) 163
SlaI CTCGAG 2 cut(s) 323, 341
SmiMI CAYNNNNRTG 2 cut(s) 551, 734
SmlI CTYRAG 3 cut(s) 323, 341, 817
SmoI CTYRAG 3 cut(s) 323, 341, 817
Sse9I AATT 4 cut(s) 157, 365, 709, 960
SsiI CCGC 6 cut(s) 6, 79, 219, 246, 449, 638
SstI GAGCTC 1 cut(s) 324
StyD4I CCNGG 1 cut(s) 360
TaaI ACNGT 4 cut(s) 13, 167, 424, 646
TaiI ACGT 2 cut(s) 480, 998
TaqI TCGA 5 cut(s) 292, 324, 342, 380, 455
TasI AATT 4 cut(s) 157, 365, 709, 960
TatI WGTACW 2 cut(s) 507, 828
TauI GCSGC 1 cut(s) 8
TfiI GAWTC 5 cut(s) 227, 242, 371, 986, 1013
Tru1I TTAA 4 cut(s) 260, 660, 947, 971
Tru9I TTAA 4 cut(s) 260, 660, 947, 971
TscAI CASTG 3 cut(s) 59, 547, 972
TseI GCWGC 3 cut(s) 248, 328, 529
TspDTI ATGAA 2 cut(s) 330, 636
TspGWI ACGGA 1 cut(s) 90
TspRI CASTG 3 cut(s) 59, 547, 972
Van91I CCANNNNNTGG 1 cut(s) 367
VpaK11BI GGWCC 1 cut(s) 163
XapI RAATTY 2 cut(s) 709, 960
XceI RCATGY 2 cut(s) 300, 871
XhoI CTCGAG 2 cut(s) 323, 341
ZrmI AGTACT 1 cut(s) 509
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.