pycom16g13090

Fip1 motif

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
OG0004701
Physical Location & Seq
Reverse (-)
9329997 .. 9333450
3454 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2421 bp
ATGGAGGATTTTGATGATGATTTCGGGGATTTATATGCCGGCGTCGAAGCGCAGGCCAATTCGGCCATCAATGGCGCACCGGACTTCGCTCACTTTTACACAGAACCAGAAGAAGATGTCATTGAGGATAATGGAAAGGTCAAAACCGCTAGTCCTGGAACCGATTCGAAGAAATCCGATTCTGACTGCGAGGAGTTGGGCGAGAAAGTTTCTGCTTTGGAGGAGAATGAGGATTACAGTGGAAGTGATAGCGAGGATGACCTGAAAATAGTGCTGAATGATGAGGACTGCGAGGGCAAAGTGTTTCCAAATGGCGGCCGAGGGCGCGTGAAGAATGATGAGCATGAGGATGAGGATGGTGATGGGTTTCCGGCTACGAAAGAGTATAAGTACATAAGGACTCAAGGACTAACTTCTCTAAGCAATGGAAAAGGCAGTGAGGCTGTGGGTTCAGCGTCTTCCATGTCGGTTAGAGGAGACCATGAAAATAGTTTGTGCTATCAACGCAAGGGTTTGAGCTCTCAGATTAGTTGTATTGGTGATACACCTAATCAAATGGTGCCTCAAAATAGATATGGTTTCAGACTTCCTTGGTACCGGACCATACTTGACGTCAACGTTGAATCGTTTGAGGAGAAGCCATGGAGGTATCCTGAGGTTGATGTAACAGACTATTTCAATTTCGGTTTGAAAGAGGACAGTTGGAAACAGTACTGTATCTCCCTGGAACAACTACGGCTAACATCTATGCAGTTTAGGATCCCTGTCTCAAGAGCTTCAAAACTTTATCAGCCAAAGGGAAGAGCAATTCAGATTGAAGATAGTATGGTTGAACGCCAACCATCTTTTGATGGTAGGCATCCACGTAGTTTGGATGCTGATGTTGTGATACAGATTGCGGTGCAGGACGGCACTGAGGAAACCACGAACTATGGTGAGGAACAGGGCCATACAAATTGTACGGCACGTGAGGCATCTGAAAATGGGGAATGTAATGCTAATGGTAACCGAACTATTCCTGCCAAAGAAGATGATTTATTGGTTGGAACTCCAGAAGGAAACACAAGGATAGCAGACAGTTGTTCCCGGAGGATCGGTCCCACTCATCCAATGACAATAGATTCTGATCAAAGAAATGACCAGTTTGTTGATCTGGATGGGTATGACTATAAGCAGGGGAATGCTGTCTCATTGGAGACTACAGAAATTACAAATAAAACAAATGACAGTGTTGGTGGGGATACTTTATATGTTGATCAATGCATGATGGAAGCACAATTATCACTTGGTGATGACAATCAACTTAGCCCCACTTCCTTTGCAAGTGATTCTGAGGCATCCAAGAATAGTGTTCATTTTGATCCAGAAGATATTAATACTCCTGCCACATCATCTTTTAAGAACCCAAAAGGCAATGGCATCAAGAGAAAAATAGTTGATATCAAAGATTACTCCATGCATAAAAGTCCTGCTCGAAAGGAGCATAAACATCAGCAAAGGAGGCTTGACAGTGTTGTTGAACCAAAGATTCACATTAAAGATGATGATGCGTCCCCTACCTCGGAAATGGACGACCTTTATGACAGGAATAACTTATTGGATTCTAGCAGACGGAAGAAAATTCTGCCAGATTTTGGCTGTAGTGATGGAGAAGATATTTCATATTATAAGGAATCAAGGCATTATGGTAGGAGACATGCTGACAACCATGTTCATACCGCTAAAACAAACTATTTGGACAGAAAAGGTAGTCACAATATCCAGGACAAGGTAAGTCCATATTTCAGAAAAAACTGGAATGAAAGGGAGTATTTTTGTGAAGATAGGGATACAGATTGGCATCGTTTTGGAAGAACACAATTCACTAACGAGAGGAGTCTTCTCCAGAACAGGGAGTCCAGGGGCTGGCACTCCAAGTATTCCCCACCCACTGTTAAAGAAAGGGATGCACAATTTAAAAGGAATGCCAACAAACTGCAGTTTAAGAAAATACCCAACCATGGTGGTGGCTGTTTCGGTTATAAACGTGAAGATGATGACTTTGTGGGAGAAAAATTTGGGAGATGTGCTTCATTTACTGGCCGAAAGAGGAATACTTTGGATGAATTTGATGAAAGGCAGTTTCCTCGGCTCAGGAGAGATTTAGGGGGAAGGGATGGATATGTTGACAAACCCGTTTTTGATTGGGATGATTCATGGTCTGGGAAAATTGAAGATGAATATTGCAGAAATGGAGAAAATCAATACTTGTCCAATCAGTTGTACAGAGATTTACACGCAGGTGAAGGAAGATGGAATGACTCTCCATCACCAAGAAATGATGTTTCTTACTCAATAACTGATGAAAGATATGGGAGACGTGAACGAGAAATATACTCTGCTGAATCCAAAGAGAGTAACTGGTTTGATCGATCGTTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03015 map03015
Pfam Domains
Protein Families
Fip1

Protein Analysis

807

Amino Acids

92.13

Weight (kDa)

4.99

Isoelectric Point (pI)

44.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Fip1 PF05182 204 - 246 7.8e-19 Fip1 motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1668, 2022
AarI CACCTGC 1 cut(s) 2270
AatII GACGTC 1 cut(s) 615
Acc36I ACCTGC 1 cut(s) 2270
Acc65I GGTACC 1 cut(s) 594
AccB1I GGYRCC 2 cut(s) 559, 594
AccB7I CCANNNNNTGG 2 cut(s) 1634, 1905
AccII CGCG 1 cut(s) 327
AciI CCGC 4 cut(s) 147, 315, 899, 1719
AclI AACGTT 1 cut(s) 618
AclWI GGATC 4 cut(s) 754, 767, 1100, 1355
AcoI YGGCCR 3 cut(s) 63, 316, 2080
AcsI RAATTY 3 cut(s) 1620, 2054, 2105
AcvI CACGTG 1 cut(s) 968
AcyI GRCGYC 2 cut(s) 42, 612
AdeI CACNNNGTG 1 cut(s) 1289
AfaI GTAC 5 cut(s) 392, 596, 713, 961, 2264
AfiI CCNNNNNNNGG 7 cut(s) 314, 1561, 1634, 1768, 1891, 1905, 2000
AgsI TTSAA 8 cut(s) 623, 679, 691, 780, 818, 833, 1520, 2213
AjiI CACGTC 1 cut(s) 2360
AjnI CCWGG 4 cut(s) 154, 723, 1761, 1898
AjuI GAANNNNNNNTTGG 2 cut(s) 1580, 1612
AleI CACNNNNGTG 1 cut(s) 2280
AloI GAACNNNNNNTCC 2 cut(s) 1880, 1912
AluBI AGCT 2 cut(s) 519, 776
AluI AGCT 2 cut(s) 519, 776
Alw21I GWGCWC 1 cut(s) 521
Alw26I GTCTC 6 cut(s) 471, 772, 1190, 1192, 1687, 2350
AlwI GGATC 4 cut(s) 754, 767, 1100, 1355
AlwNI CAGNNNCTG 1 cut(s) 1905
AoxI GGCC 5 cut(s) 54, 63, 316, 946, 2080
ApoI RAATTY 3 cut(s) 1620, 2054, 2105
AseI ATTAAT 1 cut(s) 1374
Asp700I GAANNNNTTC 1 cut(s) 163
Asp718I GGTACC 1 cut(s) 594
AspLEI GCGC 3 cut(s) 52, 77, 327
AspS9I GGNCC 3 cut(s) 600, 946, 1097
AsuC2I CCSGG 1 cut(s) 1087
AsuHPI GGTGA 6 cut(s) 371, 551, 947, 1301, 2294, 2301
AsuII TTCGAA 1 cut(s) 167
AvaII GGWCC 2 cut(s) 600, 1097
AxyI CCTNAGG 1 cut(s) 654
BamHI GGATCC 1 cut(s) 759
BanI GGYRCC 2 cut(s) 559, 594
BanII GRGCYC 1 cut(s) 521
BbrPI CACGTG 1 cut(s) 968
BbsI GAAGAC 2 cut(s) 450, 1871
Bbv12I GWGCWC 1 cut(s) 521
BceAI ACGGC 3 cut(s) 752, 925, 978
BcgI CGANNNNNNTGC 2 cut(s) 2108, 2142
BciT130I CCWGG 4 cut(s) 156, 725, 1763, 1900
BciVI GTATCC 3 cut(s) 660, 1234, 1822
BclI TGATCA 2 cut(s) 1126, 1255
BcnI CCSGG 1 cut(s) 1087
BcoDI GTCTC 6 cut(s) 471, 772, 1190, 1192, 1687, 2350
BfaI CTAG 2 cut(s) 150, 1605
BfmI CTRYAG 3 cut(s) 1200, 1639, 1976
BfuAI ACCTGC 1 cut(s) 2270
BfuI GTATCC 3 cut(s) 660, 1234, 1822
BglI GCCNNNNNGGC 1 cut(s) 62
BisI GCNGC 1 cut(s) 316
BlsI GCNGC 1 cut(s) 317
BmcAI AGTACT 1 cut(s) 713
Bme1390I CCNGG 5 cut(s) 156, 725, 1087, 1763, 1900
Bme18I GGWCC 2 cut(s) 600, 1097
BmgBI CACGTC 1 cut(s) 2360
BmgT120I GGNCC 3 cut(s) 600, 946, 1097
BmiI GGNNCC 5 cut(s) 160, 561, 596, 761, 1099
BmrFI CCNGG 5 cut(s) 156, 725, 1087, 1763, 1900
BmsI GCATC 8 cut(s) 865, 868, 983, 1346, 1428, 1537, 1849, 1936
BpiI GAAGAC 2 cut(s) 450, 1871
BpmI CTGGAG 2 cut(s) 1035, 1868
Bpu10I CCTNAGC 1 cut(s) 2132
Bpu14I TTCGAA 1 cut(s) 167
BpuEI CTTGAG 2 cut(s) 387, 754
BpuMI CCSGG 1 cut(s) 1087
Bsa29I ATCGAT 1 cut(s) 2410
BsaAI YACGTR 2 cut(s) 866, 968
BsaBI GATNNNNATC 3 cut(s) 1125, 1296, 1839
BsaHI GRCGYC 2 cut(s) 42, 612
BsaI GGTCTC 1 cut(s) 471
BsaJI CCNNGG 8 cut(s) 319, 590, 641, 723, 1560, 1899, 1999, 2126
BsaWI WCCGGW 2 cut(s) 79, 597
BsaXI ACNNNNNCTCC 4 cut(s) 704, 734, 1081, 1111
Bsc4I CCNNNNNNNGG 7 cut(s) 314, 1561, 1634, 1768, 1891, 1905, 2000
Bse118I RCCGGY 1 cut(s) 38
Bse1I ACTGG 4 cut(s) 1141, 1799, 2083, 2405
Bse21I CCTNAGG 1 cut(s) 654
Bse3DI GCAATG 2 cut(s) 430, 1420
Bse8I GATNNNNATC 3 cut(s) 1125, 1296, 1839
BseBI CCWGG 4 cut(s) 156, 725, 1763, 1900
BseCI ATCGAT 1 cut(s) 2410
BseDI CCNNGG 8 cut(s) 319, 590, 641, 723, 1560, 1899, 1999, 2126
BseJI GATNNNNATC 3 cut(s) 1125, 1296, 1839
BseLI CCNNNNNNNGG 7 cut(s) 314, 1561, 1634, 1768, 1891, 1905, 2000
BseMI GCAATG 2 cut(s) 430, 1420
BseMII CTCAG 5 cut(s) 536, 645, 906, 1323, 2146
BseNI ACTGG 4 cut(s) 1141, 1799, 2083, 2405
BseRI GAGGAG 5 cut(s) 206, 236, 489, 647, 1888
BseX3I CGGCCG 1 cut(s) 316
BsgI GTGCAG 1 cut(s) 923
Bsh1236I CGCG 1 cut(s) 327
Bsh1285I CGRYCG 2 cut(s) 319, 2414
BshFI GGCC 5 cut(s) 56, 65, 318, 948, 2082
BshNI GGYRCC 2 cut(s) 559, 594
BshVI ATCGAT 1 cut(s) 2410
BsiEI CGRYCG 2 cut(s) 319, 2414
BsiHKAI GWGCWC 1 cut(s) 521
BsiSI CCGG 5 cut(s) 39, 80, 371, 598, 1087
BslFI GGGAC 2 cut(s) 1083, 1537
BslI CCNNNNNNNGG 7 cut(s) 314, 1561, 1634, 1768, 1891, 1905, 2000
BsmAI GTCTC 6 cut(s) 471, 772, 1190, 1192, 1687, 2350
BsmBI CGTCTC 1 cut(s) 2350
BsmFI GGGAC 2 cut(s) 1083, 1537
BsmI GAATGC 2 cut(s) 1186, 1969
BsnI GGCC 5 cut(s) 56, 65, 318, 948, 2082
Bso31I GGTCTC 1 cut(s) 471
Bsp119I TTCGAA 1 cut(s) 167
Bsp1286I GDGCHC 1 cut(s) 521
Bsp1407I TGTACA 1 cut(s) 2262
Bsp143I GATC 8 cut(s) 759, 1092, 1126, 1150, 1255, 1360, 2407, 2411
Bsp19I CCATGG 2 cut(s) 641, 1999
BspACI CCGC 4 cut(s) 147, 315, 899, 1719
BspANI GGCC 5 cut(s) 56, 65, 318, 948, 2082
BspCNI CTCAG 5 cut(s) 535, 646, 907, 1324, 2145
BspDI ATCGAT 1 cut(s) 2410
BspFNI CGCG 1 cut(s) 327
BspLI GGNNCC 5 cut(s) 160, 561, 596, 761, 1099
BspMAI CTGCAG 1 cut(s) 1980
BspMI ACCTGC 1 cut(s) 2270
BspPI GGATC 4 cut(s) 754, 767, 1100, 1355
BspQI GCTCTTC 1 cut(s) 796
BspT104I TTCGAA 1 cut(s) 167
BspT107I GGYRCC 2 cut(s) 559, 594
BspTNI GGTCTC 1 cut(s) 471
BsrDI GCAATG 2 cut(s) 430, 1420
BsrFI RCCGGY 1 cut(s) 38
BsrGI TGTACA 1 cut(s) 2262
BsrI ACTGG 4 cut(s) 1141, 1799, 2083, 2405
BssAI RCCGGY 1 cut(s) 38
BssECI CCNNGG 8 cut(s) 319, 590, 641, 723, 1560, 1899, 1999, 2126
BssMI GATC 8 cut(s) 759, 1092, 1126, 1150, 1255, 1360, 2407, 2411
BssNI GRCGYC 2 cut(s) 42, 612
BssT1I CCWWGG 3 cut(s) 590, 641, 1999
Bst2UI CCWGG 4 cut(s) 156, 725, 1763, 1900
Bst4CI ACNGT 8 cut(s) 239, 701, 711, 716, 1079, 1229, 1511, 1933
Bst6I CTCTTC 1 cut(s) 796
BstACI GRCGYC 2 cut(s) 42, 612
BstAUI TGTACA 1 cut(s) 2262
BstBAI YACGTR 2 cut(s) 866, 968
BstBI TTCGAA 1 cut(s) 167
BstC8I GCNNGC 3 cut(s) 40, 54, 1907
BstDEI CTNAG 7 cut(s) 419, 522, 654, 915, 1304, 1332, 2132
BstDSI CCRYGG 2 cut(s) 641, 1999
BstEII GGTNACC 1 cut(s) 1004
BstFNI CGCG 1 cut(s) 327
BstHHI GCGC 3 cut(s) 52, 77, 327
BstKTI GATC 8 cut(s) 762, 1095, 1129, 1153, 1258, 1363, 2410, 2414
BstMAI GTCTC 6 cut(s) 471, 772, 1190, 1192, 1687, 2350
BstMBI GATC 8 cut(s) 759, 1092, 1126, 1150, 1255, 1360, 2407, 2411
BstMCI CGRYCG 2 cut(s) 319, 2414
BstMWI GCNNNNNNNGC 5 cut(s) 62, 324, 504, 971, 1501
BstNI CCWGG 4 cut(s) 156, 725, 1763, 1900
BstNSI RCATGY 1 cut(s) 1700
BstPI GGTNACC 1 cut(s) 1004
BstSCI CCNGG 5 cut(s) 154, 723, 1085, 1761, 1898
BstSFI CTRYAG 3 cut(s) 1200, 1639, 1976
BstUI CGCG 1 cut(s) 327
BstV2I GAAGAC 2 cut(s) 450, 1871
BstX2I RGATCY 1 cut(s) 759
BstXI CCANNNNNNTGG 1 cut(s) 2006
BstYI RGATCY 1 cut(s) 759
BstZI CGGCCG 1 cut(s) 316
Bsu15I ATCGAT 1 cut(s) 2410
Bsu36I CCTNAGG 1 cut(s) 654
BsuI GTATCC 3 cut(s) 660, 1234, 1822
BsuRI GGCC 5 cut(s) 56, 65, 318, 948, 2082
BsuTUI ATCGAT 1 cut(s) 2410
BtgI CCRYGG 2 cut(s) 641, 1999
BtrI CACGTC 1 cut(s) 2360
BtsI GCAGTG 1 cut(s) 442
BtsIMutI CAGTG 6 cut(s) 244, 442, 912, 1234, 1516, 1929
BveI ACCTGC 1 cut(s) 2270
Cac8I GCNNGC 3 cut(s) 40, 54, 1907
CaiI CAGNNNCTG 1 cut(s) 1905
CfoI GCGC 3 cut(s) 52, 77, 327
Cfr10I RCCGGY 1 cut(s) 38
Cfr13I GGNCC 3 cut(s) 600, 946, 1097
ClaI ATCGAT 1 cut(s) 2410
CseI GACGC 3 cut(s) 31, 444, 1539
Csp6I GTAC 5 cut(s) 391, 595, 712, 960, 2263
CspCI CAANNNNNGTGG 6 cut(s) 852, 887, 1300, 1335, 1984, 2019
CviQI GTAC 5 cut(s) 391, 595, 712, 960, 2263
DdeI CTNAG 7 cut(s) 419, 522, 654, 915, 1304, 1332, 2132
DpnI GATC 8 cut(s) 761, 1094, 1128, 1152, 1257, 1362, 2409, 2413
DpnII GATC 8 cut(s) 759, 1092, 1126, 1150, 1255, 1360, 2407, 2411
DraI TTTAAA 1 cut(s) 1957
DraIII CACNNNGTG 1 cut(s) 1289
EaeI YGGCCR 3 cut(s) 63, 316, 2080
EagI CGGCCG 1 cut(s) 316
Eam1104I CTCTTC 1 cut(s) 796
EarI CTCTTC 1 cut(s) 796
Ecl136II GAGCTC 1 cut(s) 519
EclXI CGGCCG 1 cut(s) 316
Eco130I CCWWGG 3 cut(s) 590, 641, 1999
Eco24I GRGCYC 1 cut(s) 521
Eco31I GGTCTC 1 cut(s) 471
Eco32I GATATC 1 cut(s) 1441
Eco47I GGWCC 2 cut(s) 600, 1097
Eco52I CGGCCG 1 cut(s) 316
Eco53kI GAGCTC 1 cut(s) 519
Eco72I CACGTG 1 cut(s) 968
Eco81I CCTNAGG 1 cut(s) 654
Eco91I GGTNACC 1 cut(s) 1004
EcoICRI GAGCTC 1 cut(s) 519
EcoO65I GGTNACC 1 cut(s) 1004
EcoRII CCWGG 4 cut(s) 154, 723, 1761, 1898
EcoRV GATATC 1 cut(s) 1441
EcoT14I CCWWGG 3 cut(s) 590, 641, 1999
EcoT22I ATGCAT 2 cut(s) 1265, 1461
EcoT38I GRGCYC 1 cut(s) 521
ErhI CCWWGG 3 cut(s) 590, 641, 1999
Esp3I CGTCTC 1 cut(s) 2350
FaqI GGGAC 2 cut(s) 1083, 1537
FbaI TGATCA 2 cut(s) 1126, 1255
Fnu4HI GCNGC 1 cut(s) 316
FriOI GRGCYC 1 cut(s) 521
Fsp4HI GCNGC 1 cut(s) 316
FspBI CTAG 2 cut(s) 150, 1605
GlaI GCGC 3 cut(s) 51, 76, 326
GluI GCNGC 1 cut(s) 316
GsuI CTGGAG 2 cut(s) 1035, 1868
HaeIII GGCC 5 cut(s) 56, 65, 318, 948, 2082
HapII CCGG 5 cut(s) 39, 80, 371, 598, 1087
HgaI GACGC 3 cut(s) 31, 444, 1539
HhaI GCGC 3 cut(s) 52, 77, 327
Hin1I GRCGYC 2 cut(s) 42, 612
Hin6I GCGC 3 cut(s) 50, 75, 325
HinP1I GCGC 3 cut(s) 50, 75, 325
HincII GTYRAC 2 cut(s) 616, 2167
HindII GTYRAC 2 cut(s) 616, 2167
HpaII CCGG 5 cut(s) 39, 80, 371, 598, 1087
HphI GGTGA 6 cut(s) 371, 551, 947, 1301, 2294, 2301
Hpy166II GTNNAC 3 cut(s) 616, 2167, 2363
Hpy188III TCNNGA 8 cut(s) 653, 771, 1052, 1154, 1364, 1423, 1885, 2134
Hpy8I GTNNAC 3 cut(s) 616, 2167, 2363
Hpy99I CGWCG 1 cut(s) 47
HpyAV CCTTC 3 cut(s) 1049, 2145, 2279
HpyCH4III ACNGT 8 cut(s) 239, 701, 711, 716, 1079, 1229, 1511, 1933
HpyCH4IV ACGT 6 cut(s) 612, 618, 865, 967, 2026, 2359
HpyCH4V TGCA 8 cut(s) 751, 904, 1263, 1322, 1459, 1949, 1978, 2226
HpyF10VI GCNNNNNNNGC 5 cut(s) 62, 324, 504, 971, 1501
HpyF3I CTNAG 7 cut(s) 419, 522, 654, 915, 1304, 1332, 2132
HpySE526I ACGT 6 cut(s) 612, 618, 865, 967, 2026, 2359
Hsp92I GRCGYC 2 cut(s) 42, 612
HspAI GCGC 3 cut(s) 50, 75, 325
KpnI GGTACC 1 cut(s) 598
KroI GCCGGC 1 cut(s) 38
KroNI GCCGGC 1 cut(s) 40
Ksp22I TGATCA 2 cut(s) 1126, 1255
Kzo9I GATC 8 cut(s) 759, 1092, 1126, 1150, 1255, 1360, 2407, 2411
LguI GCTCTTC 1 cut(s) 796
LmnI GCTCC 1 cut(s) 1480
LweI GCATC 8 cut(s) 865, 868, 983, 1346, 1428, 1537, 1849, 1936
MaeI CTAG 2 cut(s) 150, 1605
MaeII ACGT 6 cut(s) 612, 618, 865, 967, 2026, 2359
MaeIII GTNAC 4 cut(s) 664, 1004, 1751, 2396
MalI GATC 8 cut(s) 761, 1094, 1128, 1152, 1257, 1362, 2409, 2413
MboI GATC 8 cut(s) 759, 1092, 1126, 1150, 1255, 1360, 2407, 2411
MflI RGATCY 1 cut(s) 759
MhlI GDGCHC 1 cut(s) 521
MlyI GAGTC 4 cut(s) 394, 1885, 1904, 2294
MmeI TCCRAC 2 cut(s) 683, 1024
Mph1103I ATGCAT 2 cut(s) 1265, 1461
MroNI GCCGGC 1 cut(s) 38
MroXI GAANNNNTTC 1 cut(s) 163
MseI TTAA 6 cut(s) 1374, 1398, 1536, 1935, 1956, 1983
MslI CAYNNNNRTG 3 cut(s) 348, 2004, 2280
MspI CCGG 5 cut(s) 39, 80, 371, 598, 1087
MspR9I CCNGG 5 cut(s) 156, 725, 1087, 1763, 1900
Mva1269I GAATGC 2 cut(s) 1186, 1969
MvaI CCWGG 4 cut(s) 156, 725, 1763, 1900
MvnI CGCG 1 cut(s) 327
MwoI GCNNNNNNNGC 5 cut(s) 62, 324, 504, 971, 1501
NaeI GCCGGC 1 cut(s) 40
NciI CCSGG 1 cut(s) 1087
NcoI CCATGG 2 cut(s) 641, 1999
NdeII GATC 8 cut(s) 759, 1092, 1126, 1150, 1255, 1360, 2407, 2411
NgoMIV GCCGGC 1 cut(s) 38
NlaIV GGNNCC 5 cut(s) 160, 561, 596, 761, 1099
NmeAIII GCCGAG 2 cut(s) 344, 2107
NmuCI GTSAC 1 cut(s) 1751
NsiI ATGCAT 2 cut(s) 1265, 1461
NspI RCATGY 1 cut(s) 1700
NspV TTCGAA 1 cut(s) 167
OliI CACNNNNGTG 1 cut(s) 2280
PaqCI CACCTGC 1 cut(s) 2270
PciSI GCTCTTC 1 cut(s) 796
PctI GAATGC 2 cut(s) 1186, 1969
PdiI GCCGGC 1 cut(s) 40
PdmI GAANNNNTTC 1 cut(s) 163
PflMI CCANNNNNTGG 2 cut(s) 1634, 1905
PfoI TCCNGGA 3 cut(s) 154, 1085, 1761
PkrI GCNGC 1 cut(s) 317
Ple19I CGATCG 1 cut(s) 2414
PleI GAGTC 4 cut(s) 394, 1884, 1903, 2294
PmaCI CACGTG 1 cut(s) 968
PmlI CACGTG 1 cut(s) 968
PpsI GAGTC 4 cut(s) 394, 1884, 1903, 2294
Ppu21I YACGTR 2 cut(s) 866, 968
PshBI ATTAAT 1 cut(s) 1374
PsiI TTATAA 2 cut(s) 1668, 2022
Psp124BI GAGCTC 1 cut(s) 521
Psp1406I AACGTT 1 cut(s) 618
Psp6I CCWGG 4 cut(s) 154, 723, 1761, 1898
PspCI CACGTG 1 cut(s) 968
PspEI GGTNACC 1 cut(s) 1004
PspGI CCWGG 4 cut(s) 154, 723, 1761, 1898
PspN4I GGNNCC 5 cut(s) 160, 561, 596, 761, 1099
PspPI GGNCC 3 cut(s) 600, 946, 1097
PstI CTGCAG 1 cut(s) 1980
PstNI CAGNNNCTG 1 cut(s) 1905
PsuI RGATCY 1 cut(s) 759
PvuI CGATCG 1 cut(s) 2414
RsaI GTAC 5 cut(s) 392, 596, 713, 961, 2264
RsaNI GTAC 5 cut(s) 391, 595, 712, 960, 2263
RseI CAYNNNNRTG 3 cut(s) 348, 2004, 2280
SacI GAGCTC 1 cut(s) 521
SapI GCTCTTC 1 cut(s) 796
SaqAI TTAA 6 cut(s) 1374, 1398, 1536, 1935, 1956, 1983
SatI GCNGC 1 cut(s) 316
Sau3AI GATC 8 cut(s) 759, 1092, 1126, 1150, 1255, 1360, 2407, 2411
Sau96I GGNCC 3 cut(s) 600, 946, 1097
ScaI AGTACT 1 cut(s) 713
SchI GAGTC 4 cut(s) 394, 1885, 1904, 2294
ScrFI CCNGG 5 cut(s) 156, 725, 1087, 1763, 1900
SduI GDGCHC 1 cut(s) 521
SfaNI GCATC 8 cut(s) 865, 868, 983, 1346, 1428, 1537, 1849, 1936
SfcI CTRYAG 3 cut(s) 1200, 1639, 1976
SfiI GGCCNNNNNGGCC 1 cut(s) 62
SfuI TTCGAA 1 cut(s) 167
SinI GGWCC 2 cut(s) 600, 1097
SmiMI CAYNNNNRTG 3 cut(s) 348, 2004, 2280
SmlI CTYRAG 2 cut(s) 402, 769
SmoI CTYRAG 2 cut(s) 402, 769
SsiI CCGC 4 cut(s) 147, 315, 899, 1719
SspI AATATT 1 cut(s) 2222
SspMI CTAG 2 cut(s) 150, 1605
SstI GAGCTC 1 cut(s) 521
StyD4I CCNGG 5 cut(s) 154, 723, 1085, 1761, 1898
StyI CCWWGG 3 cut(s) 590, 641, 1999
TaaI ACNGT 8 cut(s) 239, 701, 711, 716, 1079, 1229, 1511, 1933
TaiI ACGT 6 cut(s) 615, 621, 868, 970, 2029, 2362
TaqI TCGA 4 cut(s) 45, 167, 1474, 2410
TaqII GACCGA 1 cut(s) 1085
TatI WGTACW 3 cut(s) 390, 711, 2262
TauI GCSGC 1 cut(s) 318
Tru1I TTAA 6 cut(s) 1374, 1398, 1536, 1935, 1956, 1983
Tru9I TTAA 6 cut(s) 1374, 1398, 1536, 1935, 1956, 1983
TscAI CASTG 6 cut(s) 244, 442, 919, 1234, 1516, 1936
TseFI GTSAC 1 cut(s) 1751
Tsp45I GTSAC 1 cut(s) 1751
TspGWI ACGGA 1 cut(s) 1627
TspRI CASTG 6 cut(s) 244, 442, 919, 1234, 1516, 1936
Van91I CCANNNNNTGG 2 cut(s) 1634, 1905
VpaK11BI GGWCC 2 cut(s) 600, 1097
VspI ATTAAT 1 cut(s) 1374
XapI RAATTY 3 cut(s) 1620, 2054, 2105
XceI RCATGY 1 cut(s) 1700
XmnI GAANNNNTTC 1 cut(s) 163
XspI CTAG 2 cut(s) 150, 1605
ZraI GACGTC 1 cut(s) 613
ZrmI AGTACT 1 cut(s) 713
Zsp2I ATGCAT 2 cut(s) 1265, 1461
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.