Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0004198

Physical Location & Seq

Genomic Coordinates Reverse (-)

12943376 .. 12946578

Gene Structure 3203 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1218 bp

ATGATGCTCAGGGCCGAAGAGCAGAGCCAGCAGCTGCAGCTCGTCGAGCGCGAAGACATTGAGGATGAAGAGGACCTGTTCGAAGCGATCGACAAGTTGATTGCTCAGGGAATCAATGCCGGAGATATTAAGAAGCTTCAGGATGCAGGGATCTACACCTGCAATGGCTTGATGATGCATACGAAGAAGAACTTGACTGGAATCAAAGGATTATCAGAGGCAAAAGTTGATAAGATATGCGAAGCCGCTGAAAAGATAGTGAACTTTGGATATATTACTGGAAGTGACGCTCTGATCAAAAGAAAGTCGGTGATTAAGATTACAACCGGAAGCCATGCCCTTGATGAACTCCTAGGCGGTAATTTTGCGCTGTTAGTTATTCAATCTGGTATGTGTATCCTTTCTGTTTGTCCATCTCTTGTAATATTTCGTACAGCGTGTTTCGATGAAAAAATGAACAAAATTAAAATTAGCTTAAACAAATCCACTTTAGTTCAATTCAAGTTTGTTGTCTTCTTAACTATATGCACCTGCAGCCGACCTGATCGAATTGTGCCAATAGCTGAAAGATTTGGCTTGGATCCAGGAGCTGTCCTGGACAATATCATTTATGCTCGTGCATATACATATGAGCATCAGTATAACCTGCTTCTTGGTCTGGCTGCAAAAATGTCTGAAGAGCCATTCAGACTTCTGATTGTGGATTCGGTGATTGCCCTCTTTCGAGTTGACTTTACAGGACGAGGAGAGCTTGCAGACCGCCAGCAAAAACTAGCTCAGATGCTTTCCCGACTAACAAAGATAGCTGAGGAGTTCAACGTTGCTGTCTACATGACCAACCAAGTGATAGCCGACCCTGGTGGCGGAGTGTTCATATCAGACCCAAAGAAACCAGCAGGAGGACATGTGCTTGCCCATGCTGCAACAATCAGGCTGATGTTCAGGAAAGGCAAAGGTGAACAGCGTGTCTGCAAGGTGTTCGATGCCCCAAACCTGCCCGAGGCCGAAGCACGTTTTCCAGATAACTGCAGGAGGCATTGCCGATGCAAAGGACTGAAGTTGACGGCCTTCGTCGACACAAGAGGCAATGGAGATGCTATCTATATAATTGTAATTTGGTTCAAAACTTTAGTGATACGCAAAGTAACTTTCTTAAGAGTCGTCAGAGCACGAGAGCATGCATGTTCACTCTTGCCTGTGCTCCGAGGTATAGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000150 GO:0000217 GO:0000228 GO:0000280 GO:0000400 GO:0000724 GO:0000725 GO:0000730 GO:0000793 GO:0000794 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003697 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006312 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007127 GO:0007129 GO:0007131 GO:0008094 GO:0008150 GO:0008152 GO:0009314 GO:0009628 GO:0009987 GO:0010212 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022402 GO:0022414 GO:0022607 GO:0031974 GO:0031981 GO:0033554 GO:0034622 GO:0034641 GO:0035825 GO:0042148 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045003 GO:0045132 GO:0045143 GO:0046483 GO:0048285 GO:0050896 GO:0051026 GO:0051276 GO:0051321 GO:0051716 GO:0061982 GO:0065003 GO:0065004 GO:0070013 GO:0070192 GO:0071704 GO:0071824 GO:0071840 GO:0090304 GO:0090735 GO:0097159 GO:0098813 GO:0140013 GO:0140097 GO:1901360 GO:1901363 GO:1903046

KEGG Pathways

Metabolic & Signaling

ko04113 map04113

Pfam Domains

Protein Families

Rad51

Protein Analysis

406

Amino Acids

45.1

Weight (kDa)

8.9

Isoelectric Point (pI)

30.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rad51	PF08423	100 - 339	2.1e-79	Rad51

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004198)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22880 AT3G22880
fragaria_vesca	FvH4_4g03620 FvH4_4g03620 FvH4_4g03740 FvH4_4g03740 FvH4_4g03740
malus_domestica	MD16G1200300.v1.1
prunus_persica	Prupe.1G022500_v2.0.a1 Prupe.1G022500_v2.0.a1
pyrus_communis	pycom16g16950
rosa_chinensis	RchiOBHm_Chr4g0392991 RchiOBHm_Chr4g0393441 RchiOBHm_Chr4g0393481
rosa_laevigata	RLG00000009753 RLG00000009756 RLG00000009776 RLG00000010122
rosa_multiflora	Rmu_sc0008339.1_g000015 Rmu_sc0008931.1_g000008 Rmu_sc0012965.1_g000002
rosa_roxburghii	Rroxscaffold_5G00338100 Rroxscaffold_5G00338400
rosa_rugosa	Rorug03G0309300 Rorug03G0310500 Rorug04G0001200 Rorug04G0001300 Rorug04G0001700 Rorug04G0003100
rosa_samantha	Rh4CG016900
rosa_wichuraiana	Rw4G003560 Rw4G003710 Rw4G003740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	167, 539
Acc36I	ACCTGC	4 cut(s)	167, 539, 654, 1002
AccI	GTMKAC	2 cut(s)	828, 1074
AccII	CGCG	1 cut(s)	51
AciI	CCGC	4 cut(s)	246, 357, 760, 864
AclI	AACGTT	1 cut(s)	819
AclWI	GGATC	3 cut(s)	158, 575, 588
AcuI	CTGAAG	3 cut(s)	122, 696, 1076
AfaI	GTAC	1 cut(s)	433
AfiI	CCNNNNNNNGG	3 cut(s)	863, 899, 1000
AflII	CTTAAG	1 cut(s)	1153
AflIII	ACRYGT	1 cut(s)	904
AgsI	TTSAA	5 cut(s)	383, 497, 502, 817, 1123
AjnI	CCWGG	3 cut(s)	583, 594, 856
Alw21I	GWGCWC	2 cut(s)	1171, 1203
AlwI	GGATC	3 cut(s)	158, 575, 588
AlwNI	CAGNNNCTG	2 cut(s)	34, 590
Ama87I	CYCGRG	1 cut(s)	998
AoxI	GGCC	3 cut(s)	12, 1002, 1065
ApeKI	GCWGC	6 cut(s)	31, 34, 37, 534, 662, 920
AspA2I	CCTAGG	1 cut(s)	352
AspLEI	GCGC	2 cut(s)	51, 370
AspS9I	GGNCC	2 cut(s)	12, 73
AsuHPI	GGTGA	3 cut(s)	322, 721, 968
AsuII	TTCGAA	1 cut(s)	81
AvaI	CYCGRG	1 cut(s)	998
AvaII	GGWCC	1 cut(s)	73
AvrII	CCTAGG	1 cut(s)	352
BamHI	GGATCC	1 cut(s)	580
BauI	CACGAG	2 cut(s)	615, 1170
BbsI	GAAGAC	2 cut(s)	60, 505
Bbv12I	GWGCWC	2 cut(s)	1171, 1203
BbvCI	CCTCAGC	1 cut(s)	807
BbvI	GCAGC	6 cut(s)	21, 43, 49, 546, 649, 907
BccI	CCATC	1 cut(s)	421
BceAI	ACGGC	1 cut(s)	1080
BcgI	CGANNNNNNTGC	2 cut(s)	961, 995
BciT130I	CCWGG	3 cut(s)	585, 596, 858
BciVI	GTATCC	1 cut(s)	407
BclI	TGATCA	1 cut(s)	294
BfaI	CTAG	2 cut(s)	353, 773
BfmI	CTRYAG	3 cut(s)	35, 532, 1027
BfrI	CTTAAG	1 cut(s)	1153
BfuAI	ACCTGC	4 cut(s)	167, 539, 654, 1002
BfuI	GTATCC	1 cut(s)	407
BisI	GCNGC	7 cut(s)	32, 35, 38, 246, 535, 663, 921
BlnI	CCTAGG	1 cut(s)	352
BlsI	GCNGC	7 cut(s)	33, 36, 39, 247, 536, 664, 922
Bme1390I	CCNGG	3 cut(s)	585, 596, 858
Bme18I	GGWCC	1 cut(s)	73
BmeT110I	CYCGRG	1 cut(s)	998
BmgT120I	GGNCC	2 cut(s)	12, 73
BmiI	GGNNCC	1 cut(s)	582
BmrFI	CCNGG	3 cut(s)	585, 596, 858
BmsI	GCATC	7 cut(s)	133, 165, 643, 771, 973, 1034, 1084
BpiI	GAAGAC	2 cut(s)	60, 505
Bpu10I	CCTNAGC	3 cut(s)	8, 105, 807
Bpu14I	TTCGAA	1 cut(s)	81
BsaJI	CCNNGG	4 cut(s)	352, 856, 999, 1204
BsaWI	WCCGGW	1 cut(s)	326
BsaXI	ACNNNNNCTCC	2 cut(s)	891, 921
Bsc4I	CCNNNNNNNGG	3 cut(s)	863, 899, 1000
Bse1I	ACTGG	2 cut(s)	202, 283
Bse3DI	GCAATG	3 cut(s)	169, 1036, 1093
BseBI	CCWGG	3 cut(s)	585, 596, 858
BseDI	CCNNGG	4 cut(s)	352, 856, 999, 1204
BseGI	GGATG	2 cut(s)	70, 148
BseLI	CCNNNNNNNGG	3 cut(s)	863, 899, 1000
BseMI	GCAATG	3 cut(s)	169, 1036, 1093
BseMII	CTCAG	4 cut(s)	22, 119, 791, 798
BseNI	ACTGG	2 cut(s)	202, 283
BseRI	GAGGAG	2 cut(s)	759, 824
BseXI	GCAGC	6 cut(s)	21, 43, 49, 546, 649, 907
Bsh1236I	CGCG	1 cut(s)	51
Bsh1285I	CGRYCG	1 cut(s)	90
BshFI	GGCC	3 cut(s)	14, 1004, 1067
BsiEI	CGRYCG	1 cut(s)	90
BsiHKAI	GWGCWC	2 cut(s)	1171, 1203
BsiHKCI	CYCGRG	1 cut(s)	998
BsiSI	CCGG	2 cut(s)	120, 327
BslI	CCNNNNNNNGG	3 cut(s)	863, 899, 1000
BsnI	GGCC	3 cut(s)	14, 1004, 1067
BsoBI	CYCGRG	1 cut(s)	998
Bsp119I	TTCGAA	1 cut(s)	81
Bsp1286I	GDGCHC	2 cut(s)	1171, 1203
Bsp143I	GATC	5 cut(s)	87, 150, 294, 544, 580
BspACI	CCGC	4 cut(s)	246, 357, 760, 864
BspANI	GGCC	3 cut(s)	14, 1004, 1067
BspCNI	CTCAG	4 cut(s)	21, 118, 790, 799
BspFNI	CGCG	1 cut(s)	51
BspLI	GGNNCC	1 cut(s)	582
BspMAI	CTGCAG	3 cut(s)	39, 536, 1031
BspMI	ACCTGC	4 cut(s)	167, 539, 654, 1002
BspPI	GGATC	3 cut(s)	158, 575, 588
BspQI	GCTCTTC	2 cut(s)	12, 672
BspT104I	TTCGAA	1 cut(s)	81
BspTI	CTTAAG	1 cut(s)	1153
BsrDI	GCAATG	3 cut(s)	169, 1036, 1093
BsrI	ACTGG	2 cut(s)	202, 283
BssECI	CCNNGG	4 cut(s)	352, 856, 999, 1204
BssMI	GATC	5 cut(s)	87, 150, 294, 544, 580
BssSI	CACGAG	2 cut(s)	615, 1170
BssT1I	CCWWGG	1 cut(s)	352
Bst2BI	CACGAG	2 cut(s)	615, 1170
Bst2UI	CCWGG	3 cut(s)	585, 596, 858
Bst6I	CTCTTC	3 cut(s)	12, 63, 672
BstAFI	CTTAAG	1 cut(s)	1153
BstBI	TTCGAA	1 cut(s)	81
BstC8I	GCNNGC	5 cut(s)	29, 753, 764, 912, 1179
BstDEI	CTNAG	4 cut(s)	8, 105, 777, 807
BstENI	CCTNNNNNAGG	1 cut(s)	998
BstF5I	GGATG	2 cut(s)	70, 148
BstFNI	CGCG	1 cut(s)	51
BstHHI	GCGC	2 cut(s)	51, 370
BstKTI	GATC	5 cut(s)	90, 153, 297, 547, 583
BstMBI	GATC	5 cut(s)	87, 150, 294, 544, 580
BstMCI	CGRYCG	1 cut(s)	90
BstMWI	GCNNNNNNNGC	5 cut(s)	28, 37, 46, 534, 920
BstNI	CCWGG	3 cut(s)	585, 596, 858
BstNSI	RCATGY	3 cut(s)	908, 1181, 1185
BstSCI	CCNGG	3 cut(s)	583, 594, 856
BstSFI	CTRYAG	3 cut(s)	35, 532, 1027
BstUI	CGCG	1 cut(s)	51
BstV1I	GCAGC	6 cut(s)	21, 43, 49, 546, 649, 907
BstV2I	GAAGAC	2 cut(s)	60, 505
BstX2I	RGATCY	2 cut(s)	150, 580
BstYI	RGATCY	2 cut(s)	150, 580
BsuI	GTATCC	1 cut(s)	407
BsuRI	GGCC	3 cut(s)	14, 1004, 1067
BtsCI	GGATG	2 cut(s)	70, 148
BveI	ACCTGC	4 cut(s)	167, 539, 654, 1002
Cac8I	GCNNGC	5 cut(s)	29, 753, 764, 912, 1179
CaiI	CAGNNNCTG	2 cut(s)	34, 590
CfoI	GCGC	2 cut(s)	51, 370
Cfr13I	GGNCC	2 cut(s)	12, 73
CseI	GACGC	1 cut(s)	296
Csp6I	GTAC	1 cut(s)	432
CviAII	CATG	6 cut(s)	335, 832, 905, 917, 1178, 1182
CviQI	GTAC	1 cut(s)	432
DdeI	CTNAG	4 cut(s)	8, 105, 777, 807
DpnI	GATC	5 cut(s)	89, 152, 296, 546, 582
DpnII	GATC	5 cut(s)	87, 150, 294, 544, 580
Eam1104I	CTCTTC	3 cut(s)	12, 63, 672
EarI	CTCTTC	3 cut(s)	12, 63, 672
EciI	GGCGGA	1 cut(s)	879
Eco130I	CCWWGG	1 cut(s)	352
Eco47I	GGWCC	1 cut(s)	73
Eco57I	CTGAAG	3 cut(s)	122, 696, 1076
Eco88I	CYCGRG	1 cut(s)	998
EcoNI	CCTNNNNNAGG	1 cut(s)	998
EcoO109I	RGGNCCY	1 cut(s)	73
EcoRII	CCWGG	3 cut(s)	583, 594, 856
EcoT14I	CCWWGG	1 cut(s)	352
EcoT22I	ATGCAT	2 cut(s)	180, 1183
ErhI	CCWWGG	1 cut(s)	352
FaeI	CATG	6 cut(s)	338, 835, 908, 920, 1181, 1185
FalI	AAGNNNNNCTT	2 cut(s)	176, 208
FatI	CATG	6 cut(s)	334, 831, 904, 916, 1177, 1181
FauNDI	CATATG	1 cut(s)	628
FbaI	TGATCA	1 cut(s)	294
FblI	GTMKAC	2 cut(s)	828, 1074
Fnu4HI	GCNGC	7 cut(s)	32, 35, 38, 246, 535, 663, 921
FokI	GGATG	2 cut(s)	77, 155
Fsp4HI	GCNGC	7 cut(s)	32, 35, 38, 246, 535, 663, 921
FspBI	CTAG	2 cut(s)	353, 773
GlaI	GCGC	2 cut(s)	50, 369
GluI	GCNGC	7 cut(s)	32, 35, 38, 246, 535, 663, 921
HaeIII	GGCC	3 cut(s)	14, 1004, 1067
HapII	CCGG	2 cut(s)	120, 327
HgaI	GACGC	1 cut(s)	296
HhaI	GCGC	2 cut(s)	51, 370
Hin1II	CATG	6 cut(s)	338, 835, 908, 920, 1181, 1185
Hin6I	GCGC	2 cut(s)	49, 368
HinP1I	GCGC	2 cut(s)	49, 368
HincII	GTYRAC	3 cut(s)	730, 1062, 1075
HindII	GTYRAC	3 cut(s)	730, 1062, 1075
HindIII	AAGCTT	1 cut(s)	134
HinfI	GANTC	4 cut(s)	111, 201, 704, 1158
HpaII	CCGG	2 cut(s)	120, 327
HphI	GGTGA	3 cut(s)	322, 721, 968
Hpy166II	GTNNAC	7 cut(s)	262, 730, 829, 959, 1062, 1075, 1187
Hpy188I	TCNGA	9 cut(s)	217, 294, 676, 689, 696, 780, 880, 1166, 1205
Hpy188III	TCNNGA	4 cut(s)	140, 789, 943, 1019
Hpy8I	GTNNAC	7 cut(s)	262, 730, 829, 959, 1062, 1075, 1187
Hpy99I	CGWCG	2 cut(s)	47, 1076
HpyAV	CCTTC	1 cut(s)	1078
HpyCH4IV	ACGT	2 cut(s)	819, 1012
HpyF10VI	GCNNNNNNNGC	5 cut(s)	28, 37, 46, 534, 920
HpyF3I	CTNAG	4 cut(s)	8, 105, 777, 807
HpySE526I	ACGT	2 cut(s)	819, 1012
Hsp92II	CATG	6 cut(s)	338, 835, 908, 920, 1181, 1185
HspAI	GCGC	2 cut(s)	49, 368
Ksp22I	TGATCA	1 cut(s)	294
Kzo9I	GATC	5 cut(s)	87, 150, 294, 544, 580
LguI	GCTCTTC	2 cut(s)	12, 672
LmnI	GCTCC	2 cut(s)	587, 1206
Lsp1109I	GCAGC	6 cut(s)	21, 43, 49, 546, 649, 907
LweI	GCATC	7 cut(s)	133, 165, 643, 771, 973, 1034, 1084
MaeI	CTAG	2 cut(s)	353, 773
MaeII	ACGT	2 cut(s)	819, 1012
MaeIII	GTNAC	2 cut(s)	284, 1144
MalI	GATC	5 cut(s)	89, 152, 296, 546, 582
MboI	GATC	5 cut(s)	87, 150, 294, 544, 580
MboII	GAAGA	7 cut(s)	29, 65, 80, 196, 199, 505, 689
MflI	RGATCY	2 cut(s)	150, 580
MhlI	GDGCHC	2 cut(s)	1171, 1203
MluCI	AATT	7 cut(s)	361, 462, 468, 497, 549, 1107, 1113
MlyI	GAGTC	1 cut(s)	1167
Mph1103I	ATGCAT	2 cut(s)	180, 1183
MseI	TTAA	7 cut(s)	129, 315, 465, 476, 518, 1154, 1216
MspA1I	CMGCKG	2 cut(s)	34, 248
MspCI	CTTAAG	1 cut(s)	1153
MspI	CCGG	2 cut(s)	120, 327
MspR9I	CCNGG	3 cut(s)	585, 596, 858
MvaI	CCWGG	3 cut(s)	585, 596, 858
MvnI	CGCG	1 cut(s)	51
MwoI	GCNNNNNNNGC	5 cut(s)	28, 37, 46, 534, 920
NdeI	CATATG	1 cut(s)	628
NdeII	GATC	5 cut(s)	87, 150, 294, 544, 580
NlaIII	CATG	6 cut(s)	338, 835, 908, 920, 1181, 1185
NlaIV	GGNNCC	1 cut(s)	582
NmuCI	GTSAC	1 cut(s)	284
NsiI	ATGCAT	2 cut(s)	180, 1183
NspI	RCATGY	3 cut(s)	908, 1181, 1185
NspV	TTCGAA	1 cut(s)	81
PaeI	GCATGC	1 cut(s)	1181
PaqCI	CACCTGC	2 cut(s)	167, 539
PciI	ACATGT	1 cut(s)	904
PciSI	GCTCTTC	2 cut(s)	12, 672
PcsI	WCGNNNNNNNCGW	2 cut(s)	48, 87
PfeI	GAWTC	3 cut(s)	111, 201, 704
PfoI	TCCNGGA	2 cut(s)	583, 594
PkrI	GCNGC	7 cut(s)	33, 36, 39, 247, 536, 664, 922
Ple19I	CGATCG	1 cut(s)	90
PleI	GAGTC	1 cut(s)	1166
PpsI	GAGTC	1 cut(s)	1166
PpuMI	RGGWCCY	1 cut(s)	73
PscI	ACATGT	1 cut(s)	904
Psp1406I	AACGTT	1 cut(s)	819
Psp5II	RGGWCCY	1 cut(s)	73
Psp6I	CCWGG	3 cut(s)	583, 594, 856
PspGI	CCWGG	3 cut(s)	583, 594, 856
PspN4I	GGNNCC	1 cut(s)	582
PspPI	GGNCC	2 cut(s)	12, 73
PspPPI	RGGWCCY	1 cut(s)	73
PstI	CTGCAG	3 cut(s)	39, 536, 1031
PstNI	CAGNNNCTG	2 cut(s)	34, 590
PsuI	RGATCY	2 cut(s)	150, 580
PvuI	CGATCG	1 cut(s)	90
PvuII	CAGCTG	1 cut(s)	34
RsaI	GTAC	1 cut(s)	433
RsaNI	GTAC	1 cut(s)	432
SalI	GTCGAC	1 cut(s)	1073
SapI	GCTCTTC	2 cut(s)	12, 672
SaqAI	TTAA	7 cut(s)	129, 315, 465, 476, 518, 1154, 1216
SatI	GCNGC	7 cut(s)	32, 35, 38, 246, 535, 663, 921
Sau3AI	GATC	5 cut(s)	87, 150, 294, 544, 580
Sau96I	GGNCC	2 cut(s)	12, 73
SchI	GAGTC	1 cut(s)	1167
ScrFI	CCNGG	3 cut(s)	585, 596, 858
SduI	GDGCHC	2 cut(s)	1171, 1203
SfaNI	GCATC	7 cut(s)	133, 165, 643, 771, 973, 1034, 1084
SfcI	CTRYAG	3 cut(s)	35, 532, 1027
SfuI	TTCGAA	1 cut(s)	81
SinI	GGWCC	1 cut(s)	73
SmlI	CTYRAG	1 cut(s)	1153
SmoI	CTYRAG	1 cut(s)	1153
SphI	GCATGC	1 cut(s)	1181
Sse9I	AATT	7 cut(s)	361, 462, 468, 497, 549, 1107, 1113
SsiI	CCGC	4 cut(s)	246, 357, 760, 864
SspI	AATATT	1 cut(s)	426
SspMI	CTAG	2 cut(s)	353, 773
StyD4I	CCNGG	3 cut(s)	583, 594, 856
StyI	CCWWGG	1 cut(s)	352
TaiI	ACGT	2 cut(s)	822, 1015
TaqI	TCGA	8 cut(s)	45, 81, 90, 444, 547, 724, 981, 1074
TasI	AATT	7 cut(s)	361, 462, 468, 497, 549, 1107, 1113
TauI	GCSGC	1 cut(s)	248
TfiI	GAWTC	3 cut(s)	111, 201, 704
Tru1I	TTAA	7 cut(s)	129, 315, 465, 476, 518, 1154, 1216
Tru9I	TTAA	7 cut(s)	129, 315, 465, 476, 518, 1154, 1216
TseFI	GTSAC	1 cut(s)	284
TseI	GCWGC	6 cut(s)	31, 34, 37, 534, 662, 920
Tsp45I	GTSAC	1 cut(s)	284
TspDTI	ATGAA	5 cut(s)	81, 360, 462, 470, 862
Vha464I	CTTAAG	1 cut(s)	1153
VpaK11BI	GGWCC	1 cut(s)	73
XagI	CCTNNNNNAGG	1 cut(s)	998
XceI	RCATGY	3 cut(s)	908, 1181, 1185
XmaJI	CCTAGG	1 cut(s)	352
XmiI	GTMKAC	2 cut(s)	828, 1074
XspI	CTAG	2 cut(s)	353, 773
Zsp2I	ATGCAT	2 cut(s)	180, 1183

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.